View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14975_high_16 (Length: 352)

Name: NF14975_high_16
Description: NF14975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14975_high_16
NF14975_high_16
[»] chr5 (3 HSPs)
chr5 (18-336)||(30897073-30897391)
chr5 (240-331)||(17246266-17246357)
chr5 (240-333)||(28623445-28623538)
[»] chr4 (5 HSPs)
chr4 (126-333)||(14116737-14116945)
chr4 (174-336)||(13929051-13929212)
chr4 (240-316)||(20748249-20748325)
chr4 (245-333)||(8502340-8502428)
chr4 (259-327)||(43358187-43358255)
[»] chr8 (1 HSPs)
chr8 (240-333)||(10329716-10329809)
[»] chr7 (2 HSPs)
chr7 (91-325)||(7144818-7145052)
chr7 (240-333)||(21019800-21019893)
[»] scaffold0669 (1 HSPs)
scaffold0669 (240-333)||(4702-4795)
[»] chr1 (2 HSPs)
chr1 (240-336)||(26858353-26858449)
chr1 (241-331)||(1896540-1896630)
[»] chr2 (5 HSPs)
chr2 (240-333)||(26704547-26704640)
chr2 (240-310)||(28789514-28789584)
chr2 (86-122)||(12845279-12845315)
chr2 (251-335)||(19693103-19693187)
chr2 (240-331)||(25905989-25906081)
[»] chr6 (2 HSPs)
chr6 (240-327)||(13744192-13744279)
chr6 (240-327)||(13749692-13749779)
[»] chr3 (3 HSPs)
chr3 (272-333)||(24097504-24097565)
chr3 (251-332)||(47597485-47597566)
chr3 (240-332)||(10686553-10686645)
[»] scaffold0194 (1 HSPs)
scaffold0194 (240-327)||(6747-6835)


Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 336
Target Start/End: Complemental strand, 30897391 - 30897073
Alignment:
Q  18 tgtgagcacaaaggaaaacatctaatacaaaagagaagttgttttgactttaaacatgatctgaaggtagcatttttgcttgaaagtttatgatgaaatc 117  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30897391 tgtgaacacaaaggaaaacatctgatacaaaagagaagttgttttgactttaaacatgatcagaaggtagcatttttgcttgaaagtttatgatgaaatc 30897292  T
Q  118 agactatgaaggaaagaagcttctgaaggagatgtcagcagtctgggagactttgtcttggtttgtcgtcttatgatggaatgtcactatcatctctaaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  30897291 agactatgaaggaaagaagcttctgaaggagatgtcagcagtctgggagactttgtcctggtttgtcgtcttatgatggaatgtcactatcgtctctaaa 30897192  T
Q  218 tagtacaatttgtttatcttttaccacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaatttt 317  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  30897191 tagtacaatttattttccttttaccacgtgcaaaaacaaacaagaaaagtcaaggacaaagagaatgtaatggatcgttctattagaagcaaagaatttt 30897092  T
Q  318 cgaatgactattcaacaac 336  Q
    |||||||||||||||||||    
T  30897091 cgaatgactattcaacaac 30897073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 17246357 - 17246266
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattca 331  Q
    ||||||||| |||||||||||||||| |||| |||||||||||  ||| | ||| ||||||||||| ||||| |||||  |||||| |||||    
T  17246357 accacgtgcgaaaacaaacaagaaaattcaaggacaaagagaaaataacgaatcattctattagaaacaaaggattttttaatgaccattca 17246266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 28623538 - 28623445
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    |||||||||| ||| ||| ||||||| |||| ||||| |||||||||||   || ||||||||||||||||  |||||||||||  ||||||||    
T  28623538 accacgtgcagaaataaagaagaaaattcaaggacaaggagaatgtaattgttcattctattagaagcaaatgattttcgaatgtttattcaac 28623445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 126 - 333
Target Start/End: Complemental strand, 14116945 - 14116737
Alignment:
Q  126 aaggaaagaagcttctgaaggagatgtcagcagtctgggagactttgtcttggtttgtcgtcttatgatggaatgtcactatca-tctctaaatagtaca 224  Q
    |||| ||||| |||||||| | || |||| |||||| ||||||| || |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  14116945 aagggaagaaacttctgaaagcgacgtcaacagtctaggagactctggcttggtttgtcgtcttctgagggaatgtcactatcagactctaaatagtaca 14116846  T
Q  225 atttgtttatctt-ttaccacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatg 323  Q
    | || ||  |||| | ||||| || | ||||||||||||||| |||| ||||| |||||||||    ||| ||||||||||||||||  ||||| |||||    
T  14116845 aatt-ttcttcttctgaccacatgaagaaacaaacaagaaaattcaaagacaaggagaatgtagcagatcattctattagaagcaaaagatttttgaatg 14116747  T
Q  324 actattcaac 333  Q
    ||||||||||    
T  14116746 actattcaac 14116737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 13929051 - 13929212
Alignment:
Q  174 cttggtttgtcgtcttatgatggaatgtcactatcat-ctctaaatagtacaatttgtttatctttta-ccacgtgcaaaaacaaacaagaaaagtcaac 271  Q
    |||||||||| ||||| |||||||||||||||||||| |||| ||||||| | ||||| | ||||  | ||||||||||||||||||||| ||| ||||     
T  13929051 cttggtttgttgtcttctgatggaatgtcactatcatactctgaatagtagagtttgtct-tcttcaaaccacgtgcaaaaacaaacaaggaaattcaag 13929149  T
Q  272 gacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaacaac 336  Q
    |||||| |||||||||   |||  |||||||||| ||||  ||||| ||||||||||||||||||    
T  13929150 gacaaacagaatgtaacaaatc--tctattagaaacaaaacatttttgaatgactattcaacaac 13929212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 20748325 - 20748249
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattt 316  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||   ||| ||| || |||||||||| ||||    
T  20748325 accacgtgcaaaaacaaacaaaaaaattcaacggcaaagagaatgtaacacatcattcgataagaagcaaaggattt 20748249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 8502428 - 8502340
Alignment:
Q  245 gtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    ||||| |||||||||   ||| |||| ||||||||||||||||| || | |||||||| |||||||| | |||| |||||||| |||||    
T  8502428 gtgcataaacaaacagagaaattcaaggacaaagagaatgtaatataccattctattaaaagcaaaggaatttcaaatgactactcaac 8502340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 43358255 - 43358187
Alignment:
Q  259 aagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgacta 327  Q
    ||||||| ||||  ||||||||||||||| | ||| ||||||||||||||||  | |||||||| ||||    
T  43358255 aagaaaattcaagcacaaagagaatgtaacggatcattctattagaagcaaaagaatttcgaataacta 43358187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 333
Target Start/End: Original strand, 10329716 - 10329809
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||| | ||||||||    
T  10329716 accacgtgcataaacaaacaagaaaattcaaggacaaagagaatgtaatatatcattctattagaagcaaagaattttcaaataattattcaac 10329809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 91 - 325
Target Start/End: Original strand, 7144818 - 7145052
Alignment:
Q  91 ttttgcttgaaagtttatgatgaaatcagactatgaaggaaagaagcttctgaaggagatgtcagcagtctgggagactttgtcttggtttgtcgtctta 190  Q
    ||||||| | ||| |||||||||||||| |||  ||||||||||||| |  ||||| || ||| | |||||||||||||  |   |||||||||||||||    
T  7144818 ttttgctcggaagcttatgatgaaatcaaactccgaaggaaagaagccttcgaaggtgacgtctggagtctgggagactcggatctggtttgtcgtctta 7144917  T
Q  191 tgatggaatgtcacta-tcatctctaaatagtacaatttgtttatctt-ttaccacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaat 288  Q
    |||||||||||||||| | | || | ||||||| ||||||| | |||| | |||||||||| ||| ||||||||||| | || |||||| ||||||||||    
T  7144918 tgatggaatgtcactattaaactttgaatagtagaatttgtct-tcttctgaccacgtgcagaaa-aaacaagaaaatttaaggacaaaaagaatgtaat 7145015  T
Q  289 gtatcgttctattagaagcaaagaattttcgaatgac 325  Q
      ||| |||||||||||  ||| |||||| |||||||    
T  7145016 agatcattctattagaaagaaataatttttgaatgac 7145052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 21019893 - 21019800
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    |||||||||  |||||||||| |||| |||| |  |||||||||||||   ||| ||| ||||||||||||||| |||||| |||||| |||||    
T  21019893 accacgtgctgaaacaaacaaaaaaattcaaggggaaagagaatgtaacaaatcattccattagaagcaaagaaatttcgagtgactactcaac 21019800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 4795 - 4702
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    |||||||||| ||||||||||||||| |||| ||||| |||||||||| | ||| |||||| |||| ||||| |||||||||||||||||||||    
T  4795 accacgtgcataaacaaacaagaaaattcaaggacaatgagaatgtaacgaatcattctataagaatcaaaggattttcgaatgactattcaac 4702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 336
Target Start/End: Original strand, 26858353 - 26858449
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaacaac 336  Q
    |||||||||| ||||||| ||||||| |||| |||||||| ||||||| | ||| || ||||||||||| |  ||||||| ||||||||||||||||    
T  26858353 accacgtgcagaaacaaataagaaaattcaaggacaaagaaaatgtaacgaatcattatattagaagcataagattttcggatgactattcaacaac 26858449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 1896630 - 1896540
Alignment:
Q  241 ccacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattca 331  Q
    ||||||||||||| | ||||||||  |||| ||||||||||||||||   ||| ||||||||||| ||||  || || ||||| |||||||    
T  1896630 ccacgtgcaaaaatatacaagaaagttcaaggacaaagagaatgtaacaaatcattctattagaaacaaatgatctttgaatggctattca 1896540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 333
Target Start/End: Complemental strand, 26704640 - 26704547
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    |||| ||||||||| ||||||  ||| |||| ||||||||||||| ||| |||| |||||  |||||||||||| |||| ||||||||||||||    
T  26704640 accatgtgcaaaaataaacaaagaaattcaaggacaaagagaatgcaatatatcattctaaaagaagcaaagaaatttcaaatgactattcaac 26704547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 28789514 - 28789584
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaa 310  Q
    |||||||||| ||||||| || | || |||| |||||||||||||||||  ||| ||||||||||||||||    
T  28789514 accacgtgcagaaacaaataatagaattcaaagacaaagagaatgtaatagatcattctattagaagcaaa 28789584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 12845279 - 12845315
Alignment:
Q  86 agcatttttgcttgaaagtttatgatgaaatcagact 122  Q
    |||||||||||||| |||||||||||| |||||||||    
T  12845279 agcatttttgcttggaagtttatgatggaatcagact 12845315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 19693103 - 19693187
Alignment:
Q  251 aaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaacaa 335  Q
    ||||||| | ||||| |||| ||||||||||||||||   ||| |||||| ||||| |||| | |||| |||||||| |||||||    
T  19693103 aaacaaatacgaaaattcaaggacaaagagaatgtaacagatctttctatgagaagaaaaggaatttcaaatgactactcaacaa 19693187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 25905989 - 25906081
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaag-tcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattca 331  Q
    |||||||||| |||||||||| ||||  ||||  |||| ||| | |||||  ||| || ||||| ||||||||||||||| ||||||||||||    
T  25905989 accacgtgcagaaacaaacaaaaaaaactcaagaacaatgaggaagtaatagatcattatattaaaagcaaagaattttcaaatgactattca 25906081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 13744192 - 13744279
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgacta 327  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||||||   ||| |||||||||| |  ||  |||||||||||||||    
T  13744192 accacgtgcagaaaaaaacaagaaaattcaatgacaaagagaatgtaacaaatcattctattagaggagaaagattttcgaatgacta 13744279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 13749692 - 13749779
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgacta 327  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||||||   ||| |||||||||| |  ||  |||||||||||||||    
T  13749692 accacgtgcagaaaaaaacaagaaaattcaatgacaaagagaatgtaacaaatcattctattagaggagaaagattttcgaatgacta 13749779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 24097504 - 24097565
Alignment:
Q  272 gacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaac 333  Q
    ||||| ||||||||||| |||| |||||||||||||||| || ||| ||||||||| |||||    
T  24097504 gacaacgagaatgtaatatatcattctattagaagcaaataaattttgaatgactactcaac 24097565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 332
Target Start/End: Complemental strand, 47597566 - 47597485
Alignment:
Q  251 aaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaa 332  Q
    ||||||||||  ||| |||| ||||||||||||||| || ||| ||| ||| ||||||||| | ||||||||||||| ||||    
T  47597566 aaacaaacaaagaaattcaaagacaaagagaatgtagtgaatcattccatttgaagcaaaggaatttcgaatgactactcaa 47597485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 332
Target Start/End: Complemental strand, 10686645 - 10686553
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagtcaacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgactattcaa 332  Q
    |||||||| | ||||||||||  ||| |||| | ||||||||||| |||| ||| ||| ||||||||||||  | ||||||||||||| ||||    
T  10686645 accacgtgtagaaacaaacaaagaaattcaagggcaaagagaatgcaatgaatcattcaattagaagcaaaagaatttcgaatgactactcaa 10686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 6747 - 6835
Alignment:
Q  240 accacgtgcaaaaacaaacaagaaaagt-caacgacaaagagaatgtaatgtatcgttctattagaagcaaagaattttcgaatgacta 327  Q
    |||||||||| |||||||||| |||| | ||| || || |||||||||| | ||| ||| |||||||| |||||| |||||||||||||    
T  6747 accacgtgcataaacaaacaaaaaaaattcaaggataaggagaatgtaacgaatcattccattagaagaaaagaaatttcgaatgacta 6835  T

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