View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14975_high_19 (Length: 336)
Name: NF14975_high_19
Description: NF14975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14975_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 7 - 317
Target Start/End: Complemental strand, 26491707 - 26491397
Alignment:
| Q |
7 |
agaagcaaaggacaatgtatatagttttggtgtaatattatttgagttgataacaggaaaaattccatatgcagtggaaaatggctctcaaagagattgg |
106 |
Q |
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| T |
26491707 |
agaagtaaaggacaatgtatatagttttggtgtaatattatttgagttgataacaggaaaaattccatatgcagtggaaaatggctctcaaacagattgg |
26491608 |
T |
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| Q |
107 |
gctggagaatatataagaggacaaccattgagagagatggttgatacaagcttgaactctttgaaagatgatgaaattgagaaatggtgtgaagtgatta |
206 |
Q |
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| T |
26491607 |
gctggagaatatataagaggacaaccattgagagagatggttgatacaaggttgaactctttgaaagatgatgaaattgagaaatggtgtgaagtgatta |
26491508 |
T |
|
| Q |
207 |
acaattgtgtagatcttgatcaagaaacaagaccatcaatgaaagagattacatctaagttgaaggagattactgatatgggacctgatggagcaactcc |
306 |
Q |
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| T |
26491507 |
acaattgtgtagatcttgatcaagaaacaaggtcatcaatgaaagagattacatctaaattgaaggagattactgatatggggcctgatggagcaactcc |
26491408 |
T |
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| Q |
307 |
aaaatcatccc |
317 |
Q |
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| T |
26491407 |
aaaatcatccc |
26491397 |
T |
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