View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14975_high_32 (Length: 245)
Name: NF14975_high_32
Description: NF14975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14975_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 7888095 - 7887881
Alignment:
| Q |
13 |
aaaatcaatcaattttcaattataaaatagataccaatgaaagtcctaatcaacgtgcgaactctcacctattccaactttaaattgattgaaaacttta |
112 |
Q |
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| T |
7888095 |
aaaatcaatcaattttcaattataaaatagataccaatgaaagtcctaatcaacgtgcgaactctcacctattccaactttaaattgattgaaaacttta |
7887996 |
T |
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| Q |
113 |
aatttaaattaaagattgatttatcgttccataaaattaaaagatcgaattattcaaactctacaattttgagtatcaatattcactcgataagataagt |
212 |
Q |
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| T |
7887995 |
aatttaaattaaagattgatttatcgttccataaaattaaaagatcgaattattcaaactctacaattttgagtatcaatattcactcgataagataagt |
7887896 |
T |
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| Q |
213 |
ttgctagctaaaata |
227 |
Q |
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||||||||||||||| |
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| T |
7887895 |
ttgctagctaaaata |
7887881 |
T |
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