View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14975_high_38 (Length: 214)
Name: NF14975_high_38
Description: NF14975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14975_high_38 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31716274 - 31716487
Alignment:
| Q |
1 |
aattgataaggagaattcactagagttggctaaacgatccaaaacatcggtttgcttcccgataaatataattaatgtaaatatgccaagaatctttgtt |
100 |
Q |
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| T |
31716274 |
aattgataaggagaattcactagagttggctaaacgatccaaaacatcgatttgcttcccgataaatataattaatgtaaatatgccaagaatctttgtt |
31716373 |
T |
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| Q |
101 |
aaccaagtagctaatctcacttacgagaaagaaatctgtgttgtataaccatttcttatgatgttaagtaacacttgagagttagtttccacataaaggg |
200 |
Q |
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| T |
31716374 |
aatcaagtagctaatctcacttacgagaaagaaatatgtgttgtataaccatttcttatgatattaagtaacacttgagagttagtttccacataaaggg |
31716473 |
T |
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| Q |
201 |
aagtgaagagaagc |
214 |
Q |
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|||||||||||||| |
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| T |
31716474 |
aagtgaagagaagc |
31716487 |
T |
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