View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14975_low_26 (Length: 298)

Name: NF14975_low_26
Description: NF14975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14975_low_26
NF14975_low_26
[»] scaffold0049 (1 HSPs)
scaffold0049 (154-288)||(63613-63747)
[»] chr8 (69 HSPs)
chr8 (1-153)||(24797060-24797213)
chr8 (1-153)||(41837961-41838114)
chr8 (1-155)||(3886787-3886942)
chr8 (1-153)||(7012337-7012490)
chr8 (1-153)||(9830607-9830760)
chr8 (1-150)||(5590180-5590330)
chr8 (1-153)||(3659829-3659982)
chr8 (1-153)||(4231220-4231372)
chr8 (1-152)||(6316877-6317029)
chr8 (12-93)||(42556112-42556193)
chr8 (1-153)||(1098057-1098210)
chr8 (1-93)||(22658353-22658446)
chr8 (1-93)||(28564944-28565037)
chr8 (1-93)||(28572567-28572660)
chr8 (12-93)||(7242653-7242734)
chr8 (1-93)||(21434899-21434992)
chr8 (12-93)||(43117408-43117489)
chr8 (17-152)||(1183823-1183958)
chr8 (1-92)||(10092315-10092407)
chr8 (12-153)||(38567127-38567270)
chr8 (1-87)||(4697872-4697959)
chr8 (12-93)||(2317121-2317202)
chr8 (1-93)||(7413091-7413184)
chr8 (1-93)||(36060417-36060510)
chr8 (2-93)||(41388065-41388157)
chr8 (1-87)||(21435018-21435105)
chr8 (1-89)||(38567306-38567395)
chr8 (11-87)||(43117528-43117604)
chr8 (11-90)||(197265-197344)
chr8 (11-90)||(312102-312181)
chr8 (1-87)||(5590067-5590154)
chr8 (1-87)||(7242529-7242616)
chr8 (1-87)||(36060536-36060623)
chr8 (11-87)||(3886685-3886761)
chr8 (1-87)||(1184001-1184088)
chr8 (18-93)||(7422073-7422148)
chr8 (1-87)||(28565063-28565150)
chr8 (1-87)||(28572686-28572773)
chr8 (19-84)||(25642758-25642823)
chr8 (108-153)||(34934370-34934415)
chr8 (11-87)||(7012516-7012592)
chr8 (1-87)||(2317240-2317327)
chr8 (1-87)||(3659716-3659803)
chr8 (1-87)||(22658240-22658327)
chr8 (1-87)||(41169877-41169964)
chr8 (1-87)||(41837848-41837935)
chr8 (1-87)||(42555987-42556074)
chr8 (2-87)||(4231398-4231484)
chr8 (3-87)||(41388184-41388269)
chr8 (11-87)||(10092433-10092509)
chr8 (1-84)||(36108837-36108921)
chr8 (1-87)||(1098236-1098323)
chr8 (1-87)||(4697985-4698072)
chr8 (23-84)||(8996417-8996478)
chr8 (108-153)||(11635758-11635803)
chr8 (19-91)||(25383064-25383135)
chr8 (19-84)||(8995039-8995104)
chr8 (118-155)||(10092255-10092292)
chr8 (157-192)||(3951609-3951644)
chr8 (1-87)||(6317055-6317142)
chr8 (1-87)||(24796947-24797034)
chr8 (20-91)||(32018002-32018073)
chr8 (162-192)||(20785544-20785574)
chr8 (18-87)||(7413211-7413279)
chr8 (20-93)||(11635819-11635892)
chr8 (163-192)||(24413646-24413675)
chr8 (164-193)||(36450823-36450852)
chr8 (164-192)||(5137490-5137518)
chr8 (160-192)||(43737896-43737928)
[»] chr3 (67 HSPs)
chr3 (3-155)||(18163715-18163868)
chr3 (1-153)||(29126050-29126203)
chr3 (1-153)||(50527640-50527793)
chr3 (1-153)||(52571431-52571584)
chr3 (2-153)||(52201981-52202133)
chr3 (1-150)||(22729222-22729372)
chr3 (4-153)||(36633486-36633636)
chr3 (1-153)||(12251514-12251667)
chr3 (1-147)||(1092884-1093031)
chr3 (1-154)||(7160297-7160451)
chr3 (20-154)||(28952418-28952552)
chr3 (1-153)||(13594880-13595033)
chr3 (1-88)||(11232161-11232249)
chr3 (1-150)||(32270926-32271074)
chr3 (2-150)||(21259442-21259591)
chr3 (1-93)||(27742545-27742638)
chr3 (12-154)||(49169791-49169933)
chr3 (1-93)||(44254607-44254700)
chr3 (1-154)||(16908825-16908969)
chr3 (1-88)||(35083857-35083945)
chr3 (1-87)||(13594767-13594854)
chr3 (1-87)||(32270813-32270900)
chr3 (12-93)||(44205471-44205553)
chr3 (1-93)||(49657218-49657311)
chr3 (1-87)||(11232048-11232135)
chr3 (1-87)||(22729398-22729485)
chr3 (1-87)||(44254494-44254581)
chr3 (1-93)||(4618210-4618301)
chr3 (1-87)||(16908712-16908799)
chr3 (1-87)||(28952285-28952372)
chr3 (1-87)||(29125937-29126024)
chr3 (1-87)||(36633665-36633752)
chr3 (1-87)||(49657105-49657192)
chr3 (1-87)||(50527527-50527614)
chr3 (1-93)||(25246231-25246324)
chr3 (11-87)||(21259225-21259301)
chr3 (11-87)||(21259339-21259415)
chr3 (11-87)||(35083971-35084047)
chr3 (1-87)||(1092771-1092858)
chr3 (1-87)||(27742664-27742751)
chr3 (1-91)||(34660807-34660898)
chr3 (1-87)||(45045388-45045475)
chr3 (1-66)||(31174566-31174632)
chr3 (3-87)||(744032-744116)
chr3 (18-87)||(49169971-49170040)
chr3 (11-87)||(12251412-12251488)
chr3 (113-148)||(7441702-7441737)
chr3 (160-194)||(750702-750736)
chr3 (112-153)||(2618884-2618925)
chr3 (16-56)||(743958-743998)
chr3 (160-192)||(14027959-14027991)
chr3 (160-191)||(17568753-17568784)
chr3 (110-153)||(25246343-25246386)
chr3 (160-194)||(7171444-7171478)
chr3 (162-192)||(13845584-13845614)
chr3 (160-194)||(35994820-35994854)
chr3 (1-84)||(2618953-2619035)
chr3 (162-191)||(16000101-16000130)
chr3 (160-193)||(21479067-21479100)
chr3 (112-153)||(34660753-34660794)
chr3 (160-192)||(3164108-3164140)
chr3 (160-192)||(10318123-10318155)
chr3 (160-192)||(10335369-10335401)
chr3 (160-192)||(14747511-14747543)
chr3 (160-192)||(15796377-15796409)
chr3 (164-192)||(23870622-23870650)
chr3 (164-192)||(45451523-45451551)
[»] chr2 (60 HSPs)
chr2 (1-151)||(34983277-34983428)
chr2 (3-153)||(38527173-38527324)
chr2 (1-155)||(38763711-38763866)
chr2 (12-154)||(23869661-23869803)
chr2 (1-153)||(13615969-13616122)
chr2 (1-155)||(2249578-2249733)
chr2 (1-153)||(22674746-22674899)
chr2 (1-91)||(26293221-26293312)
chr2 (1-153)||(34494481-34494634)
chr2 (1-153)||(36436188-36436341)
chr2 (2-153)||(6750013-6750165)
chr2 (1-93)||(12995025-12995118)
chr2 (1-153)||(28745499-28745653)
chr2 (1-153)||(1115044-1115197)
chr2 (12-153)||(44545747-44545888)
chr2 (1-93)||(11764853-11764946)
chr2 (1-93)||(31392606-31392699)
chr2 (1-153)||(1021074-1021229)
chr2 (2-93)||(19283937-19284029)
chr2 (11-93)||(42016562-42016644)
chr2 (1-93)||(16194311-16194404)
chr2 (11-151)||(41699185-41699325)
chr2 (1-153)||(7366150-7366303)
chr2 (1-93)||(26860668-26860761)
chr2 (3-93)||(43471462-43471553)
chr2 (11-87)||(42016681-42016757)
chr2 (1-87)||(6749899-6749986)
chr2 (1-87)||(13615856-13615943)
chr2 (2-87)||(34983454-34983540)
chr2 (3-87)||(16194430-16194515)
chr2 (19-91)||(11935401-11935473)
chr2 (19-87)||(38763892-38763960)
chr2 (1-87)||(1114931-1115018)
chr2 (1-87)||(2249759-2249846)
chr2 (1-87)||(11764972-11765059)
chr2 (1-87)||(23869841-23869928)
chr2 (1-87)||(26293338-26293425)
chr2 (1-87)||(36436075-36436162)
chr2 (1-87)||(44545622-44545709)
chr2 (2-85)||(3836347-3836431)
chr2 (1-87)||(38527352-38527438)
chr2 (3-87)||(1020963-1021048)
chr2 (11-87)||(26860566-26860642)
chr2 (1-79)||(7366337-7366416)
chr2 (12-87)||(11935280-11935355)
chr2 (1-87)||(12995144-12995231)
chr2 (1-87)||(28745386-28745473)
chr2 (1-87)||(31392724-31392811)
chr2 (20-91)||(17526052-17526123)
chr2 (108-147)||(42473566-42473605)
chr2 (160-194)||(26769459-26769493)
chr2 (160-194)||(27447084-27447118)
chr2 (120-152)||(12994975-12995007)
chr2 (160-192)||(21374777-21374809)
chr2 (113-150)||(2076934-2076971)
chr2 (164-193)||(27084229-27084258)
chr2 (108-153)||(32099928-32099973)
chr2 (164-193)||(37558938-37558967)
chr2 (160-192)||(31283992-31284024)
chr2 (164-192)||(44770207-44770235)
[»] chr5 (61 HSPs)
chr5 (1-153)||(26525235-26525388)
chr5 (1-155)||(3631256-3631411)
chr5 (1-153)||(9737712-9737865)
chr5 (1-153)||(25701426-25701579)
chr5 (1-153)||(30772878-30773031)
chr5 (12-152)||(43358410-43358550)
chr5 (2-150)||(16823133-16823282)
chr5 (1-151)||(43348635-43348786)
chr5 (20-153)||(13013280-13013413)
chr5 (1-148)||(29390273-29390421)
chr5 (12-153)||(8074256-8074398)
chr5 (1-153)||(7440486-7440638)
chr5 (12-93)||(15374174-15374255)
chr5 (1-149)||(9596171-9596320)
chr5 (1-153)||(26297014-26297167)
chr5 (20-93)||(13084668-13084741)
chr5 (1-93)||(20656863-20656956)
chr5 (12-93)||(32304670-32304751)
chr5 (1-154)||(19577186-19577339)
chr5 (1-85)||(7440373-7440458)
chr5 (1-93)||(10925568-10925661)
chr5 (20-154)||(5844104-5844238)
chr5 (1-91)||(20487033-20487124)
chr5 (1-153)||(41084587-41084738)
chr5 (1-87)||(3631437-3631524)
chr5 (1-87)||(32304545-32304632)
chr5 (1-87)||(43348812-43348899)
chr5 (1-87)||(26525122-26525209)
chr5 (1-87)||(30773057-30773144)
chr5 (1-85)||(26785010-26785095)
chr5 (107-152)||(28662117-28662162)
chr5 (1-87)||(9596058-9596145)
chr5 (1-87)||(16823309-16823396)
chr5 (1-87)||(25701314-25701400)
chr5 (107-154)||(26784910-26784957)
chr5 (1-87)||(43358588-43358675)
chr5 (12-84)||(37042571-37042643)
chr5 (1-91)||(41817514-41817605)
chr5 (107-145)||(6229071-6229109)
chr5 (160-198)||(34276795-34276833)
chr5 (160-193)||(15382420-15382453)
chr5 (11-87)||(13013158-13013234)
chr5 (160-199)||(13287482-13287522)
chr5 (1-64)||(15374301-15374365)
chr5 (20-87)||(10925687-10925754)
chr5 (111-149)||(20071329-20071367)
chr5 (160-189)||(8419985-8420014)
chr5 (157-194)||(17177103-17177140)
chr5 (160-193)||(21522693-21522726)
chr5 (160-193)||(21533259-21533292)
chr5 (18-91)||(22578958-22579031)
chr5 (160-193)||(32426935-32426968)
chr5 (3-87)||(41084476-41084560)
chr5 (157-190)||(41995417-41995450)
chr5 (160-192)||(6401442-6401474)
chr5 (162-194)||(6770485-6770517)
chr5 (11-87)||(13084546-13084622)
chr5 (114-154)||(20656977-20657017)
chr5 (160-192)||(20683325-20683357)
chr5 (160-192)||(23016074-23016106)
chr5 (164-192)||(43001762-43001790)
[»] chr1 (83 HSPs)
chr1 (1-153)||(17285299-17285452)
chr1 (1-154)||(16692954-16693108)
chr1 (1-150)||(33012062-33012212)
chr1 (3-154)||(29169940-29170092)
chr1 (1-153)||(919715-919868)
chr1 (1-153)||(6849752-6849905)
chr1 (1-153)||(8530082-8530235)
chr1 (2-151)||(44052465-44052615)
chr1 (1-153)||(29981712-29981865)
chr1 (12-153)||(37125692-37125833)
chr1 (1-153)||(42371969-42372122)
chr1 (1-154)||(48708422-48708577)
chr1 (3-93)||(40428788-40428879)
chr1 (1-153)||(24790434-24790587)
chr1 (12-153)||(47561726-47561867)
chr1 (1-93)||(24544723-24544816)
chr1 (1-93)||(45836903-45836996)
chr1 (1-93)||(51139745-51139838)
chr1 (1-143)||(23177351-23177494)
chr1 (1-88)||(25299093-25299181)
chr1 (1-91)||(46224765-46224856)
chr1 (1-153)||(9042424-9042576)
chr1 (1-93)||(8086289-8086382)
chr1 (1-93)||(44317626-44317719)
chr1 (1-87)||(33011949-33012036)
chr1 (1-87)||(40567144-40567231)
chr1 (2-87)||(48708310-48708396)
chr1 (1-76)||(40567042-40567118)
chr1 (1-87)||(8086408-8086495)
chr1 (1-87)||(42372148-42372235)
chr1 (1-87)||(45837022-45837109)
chr1 (1-87)||(24790613-24790701)
chr1 (11-87)||(29981610-29981686)
chr1 (1-87)||(16692841-16692928)
chr1 (1-87)||(37125871-37125958)
chr1 (1-87)||(40428673-40428760)
chr1 (1-87)||(47561905-47561992)
chr1 (11-87)||(25298991-25299067)
chr1 (1-87)||(23177520-23177607)
chr1 (1-87)||(24542672-24542759)
chr1 (1-87)||(24542786-24542873)
chr1 (1-87)||(24542900-24542987)
chr1 (1-87)||(24543014-24543101)
chr1 (1-87)||(24543128-24543215)
chr1 (1-87)||(24543242-24543329)
chr1 (1-87)||(24543356-24543443)
chr1 (1-87)||(24543470-24543557)
chr1 (1-87)||(24543584-24543671)
chr1 (1-87)||(24543698-24543785)
chr1 (1-87)||(24543812-24543899)
chr1 (1-87)||(24543926-24544013)
chr1 (1-87)||(24544040-24544127)
chr1 (1-87)||(24544154-24544241)
chr1 (1-87)||(24544268-24544355)
chr1 (1-87)||(24544382-24544469)
chr1 (1-87)||(24544496-24544583)
chr1 (1-87)||(24544610-24544697)
chr1 (1-87)||(46224652-46224739)
chr1 (1-87)||(51139864-51139951)
chr1 (3-87)||(919604-919689)
chr1 (19-88)||(9246925-9246994)
chr1 (11-87)||(6849931-6850007)
chr1 (1-87)||(17285186-17285273)
chr1 (1-87)||(44052351-44052438)
chr1 (21-91)||(32540620-32540690)
chr1 (107-155)||(17879973-17880021)
chr1 (11-87)||(29170120-29170196)
chr1 (111-151)||(37343027-37343067)
chr1 (108-152)||(46224874-46224918)
chr1 (1-87)||(9042311-9042398)
chr1 (160-195)||(48548045-48548080)
chr1 (120-153)||(45836854-45836887)
chr1 (160-192)||(10577818-10577850)
chr1 (160-192)||(25934572-25934604)
chr1 (160-192)||(38078739-38078771)
chr1 (107-151)||(43532470-43532514)
chr1 (160-194)||(24334778-24334812)
chr1 (160-193)||(398848-398881)
chr1 (108-153)||(9247013-9247058)
chr1 (157-194)||(17831605-17831642)
chr1 (1-57)||(37343082-37343139)
chr1 (164-200)||(35919358-35919394)
chr1 (164-192)||(51409981-51410009)
[»] scaffold0014 (3 HSPs)
scaffold0014 (1-153)||(64933-65086)
scaffold0014 (1-87)||(65226-65313)
scaffold0014 (1-87)||(65112-65199)
[»] chr7 (66 HSPs)
chr7 (1-153)||(26873702-26873855)
chr7 (1-154)||(43859089-43859243)
chr7 (1-149)||(17166869-17167018)
chr7 (1-153)||(36358316-36358469)
chr7 (1-153)||(46027679-46027832)
chr7 (1-150)||(44468027-44468177)
chr7 (1-93)||(31428796-31428889)
chr7 (12-153)||(45350051-45350191)
chr7 (1-93)||(22723782-22723875)
chr7 (1-155)||(16834283-16834438)
chr7 (4-154)||(44724072-44724223)
chr7 (12-153)||(36675505-36675646)
chr7 (1-93)||(31065629-31065722)
chr7 (2-93)||(39976380-39976472)
chr7 (1-93)||(29075191-29075284)
chr7 (2-93)||(42241936-42242028)
chr7 (12-93)||(9624055-9624136)
chr7 (1-93)||(18104325-18104417)
chr7 (1-93)||(44142821-44142914)
chr7 (3-81)||(23469404-23469483)
chr7 (1-87)||(41367724-41367811)
chr7 (1-93)||(31931917-31932010)
chr7 (1-87)||(9624174-9624261)
chr7 (1-153)||(8461698-8461851)
chr7 (19-77)||(40055666-40055724)
chr7 (11-87)||(31065527-31065603)
chr7 (1-87)||(36675380-36675467)
chr7 (1-87)||(44142939-44143026)
chr7 (1-87)||(44723956-44724043)
chr7 (11-87)||(17167045-17167121)
chr7 (3-153)||(23562656-23562806)
chr7 (1-155)||(29502138-29502293)
chr7 (11-87)||(40055769-40055845)
chr7 (1-91)||(22499784-22499875)
chr7 (1-87)||(22723669-22723756)
chr7 (1-87)||(23469289-23469376)
chr7 (20-87)||(29075098-29075165)
chr7 (1-87)||(36358203-36358290)
chr7 (1-87)||(43859269-43859356)
chr7 (1-87)||(46027858-46027945)
chr7 (2-87)||(45350229-45350315)
chr7 (1-84)||(46828842-46828926)
chr7 (1-87)||(44467914-44468001)
chr7 (20-81)||(22566606-22566667)
chr7 (108-153)||(29662932-29662977)
chr7 (2-86)||(41367838-41367923)
chr7 (110-153)||(19692467-19692510)
chr7 (110-156)||(28754810-28754856)
chr7 (35-88)||(6961111-6961164)
chr7 (108-149)||(8727725-8727766)
chr7 (117-154)||(9014390-9014427)
chr7 (18-87)||(42241840-42241909)
chr7 (160-192)||(9778452-9778484)
chr7 (4-83)||(16649605-16649685)
chr7 (4-83)||(17623966-17624046)
chr7 (1-87)||(26873881-26873968)
chr7 (109-155)||(27949680-27949726)
chr7 (115-153)||(40054298-40054336)
chr7 (19-80)||(8727794-8727855)
chr7 (121-154)||(9013814-9013847)
chr7 (157-194)||(9408421-9408458)
chr7 (157-190)||(11061156-11061189)
chr7 (162-194)||(1433396-1433428)
chr7 (160-192)||(17851375-17851407)
chr7 (162-190)||(21141067-21141095)
chr7 (19-83)||(25174216-25174280)
[»] chr6 (46 HSPs)
chr6 (1-153)||(2660844-2660997)
chr6 (1-153)||(9079061-9079214)
chr6 (1-153)||(24635476-24635629)
chr6 (1-153)||(12698493-12698647)
chr6 (1-93)||(15469149-15469242)
chr6 (1-154)||(11450510-11450668)
chr6 (1-151)||(24130250-24130396)
chr6 (1-153)||(8560426-8560578)
chr6 (12-153)||(16461427-16461568)
chr6 (12-88)||(7021882-7021958)
chr6 (12-93)||(34127557-34127638)
chr6 (1-154)||(26468447-26468601)
chr6 (1-87)||(34127676-34127763)
chr6 (2-93)||(34023549-34023641)
chr6 (18-149)||(13405387-13405518)
chr6 (12-93)||(23259086-23259167)
chr6 (1-87)||(2660731-2660818)
chr6 (1-87)||(7021996-7022083)
chr6 (1-87)||(26468627-26468714)
chr6 (1-87)||(11450397-11450484)
chr6 (1-87)||(12996464-12996551)
chr6 (1-87)||(23258847-23258934)
chr6 (1-87)||(23258961-23259048)
chr6 (1-93)||(14883167-14883261)
chr6 (2-87)||(34023436-34023522)
chr6 (1-87)||(15469268-15469354)
chr6 (1-87)||(24635363-24635450)
chr6 (2-155)||(12996282-12996435)
chr6 (109-154)||(10290456-10290501)
chr6 (1-81)||(12698678-12698759)
chr6 (1-87)||(8560604-8560691)
chr6 (1-87)||(24130137-24130224)
chr6 (160-194)||(7938058-7938092)
chr6 (160-192)||(18367781-18367813)
chr6 (110-149)||(2399421-2399460)
chr6 (160-194)||(5970185-5970219)
chr6 (160-194)||(9107453-9107487)
chr6 (19-80)||(31489894-31489955)
chr6 (19-91)||(7536518-7536590)
chr6 (160-192)||(8777056-8777088)
chr6 (1-91)||(10290519-10290610)
chr6 (160-192)||(10294051-10294083)
chr6 (120-152)||(15469101-15469133)
chr6 (1-87)||(16461301-16461389)
chr6 (164-192)||(34225888-34225916)
chr6 (158-194)||(34290158-34290194)
[»] chr4 (72 HSPs)
chr4 (1-153)||(11650972-11651125)
chr4 (2-151)||(2654917-2655067)
chr4 (1-153)||(6755828-6755981)
chr4 (1-153)||(13233229-13233382)
chr4 (12-155)||(40228448-40228592)
chr4 (2-155)||(18491184-18491338)
chr4 (2-153)||(44134493-44134644)
chr4 (12-152)||(44745608-44745748)
chr4 (1-153)||(16925106-16925258)
chr4 (16-153)||(19653666-19653803)
chr4 (12-153)||(44817567-44817708)
chr4 (1-155)||(38141563-38141719)
chr4 (16-153)||(31581772-31581909)
chr4 (1-154)||(36584422-36584575)
chr4 (1-91)||(41832437-41832528)
chr4 (1-93)||(36955016-36955109)
chr4 (12-153)||(43564417-43564558)
chr4 (1-93)||(12700574-12700667)
chr4 (12-144)||(13613110-13613241)
chr4 (1-153)||(31664173-31664322)
chr4 (1-93)||(45670019-45670112)
chr4 (3-153)||(52581455-52581606)
chr4 (1-93)||(54795735-54795828)
chr4 (1-153)||(27270353-27270505)
chr4 (1-153)||(51001475-51001627)
chr4 (1-93)||(50767093-50767186)
chr4 (11-87)||(44134671-44134747)
chr4 (1-87)||(6756007-6756094)
chr4 (1-87)||(10096349-10096436)
chr4 (1-87)||(13233408-13233495)
chr4 (1-87)||(13612985-13613072)
chr4 (1-87)||(31664060-31664147)
chr4 (1-85)||(18491367-18491452)
chr4 (1-87)||(12700461-12700548)
chr4 (1-153)||(22647110-22647263)
chr4 (1-87)||(36584601-36584688)
chr4 (1-87)||(38141450-38141537)
chr4 (1-87)||(43564596-43564683)
chr4 (1-83)||(44745483-44745566)
chr4 (1-92)||(4632711-4632803)
chr4 (2-93)||(10096463-10096555)
chr4 (11-87)||(31581654-31581730)
chr4 (1-87)||(11650859-11650946)
chr4 (1-87)||(36954903-36954990)
chr4 (1-87)||(41832555-41832642)
chr4 (1-87)||(44817443-44817530)
chr4 (1-87)||(16925284-16925371)
chr4 (1-79)||(7638763-7638842)
chr4 (1-87)||(22647289-22647376)
chr4 (111-153)||(13857612-13857654)
chr4 (157-194)||(5111587-5111624)
chr4 (112-153)||(13869142-13869183)
chr4 (18-91)||(36801885-36801958)
chr4 (120-153)||(36955136-36955169)
chr4 (3-87)||(50767213-50767297)
chr4 (3-87)||(54795624-54795708)
chr4 (1-84)||(13857680-13857764)
chr4 (44-91)||(9046131-9046178)
chr4 (12-83)||(13869211-13869282)
chr4 (1-87)||(19653538-19653624)
chr4 (164-194)||(22234954-22234984)
chr4 (160-194)||(23293069-23293103)
chr4 (158-192)||(28470341-28470375)
chr4 (160-194)||(37203220-37203254)
chr4 (163-192)||(4157102-4157131)
chr4 (54-91)||(18707738-18707775)
chr4 (54-91)||(18735241-18735278)
chr4 (163-192)||(20633429-20633458)
chr4 (20-84)||(4632617-4632681)
chr4 (160-192)||(11110754-11110786)
chr4 (19-83)||(40228342-40228406)
chr4 (160-192)||(46084049-46084081)
[»] scaffold0050 (2 HSPs)
scaffold0050 (1-150)||(19048-19198)
scaffold0050 (18-87)||(19224-19293)
[»] scaffold0002 (2 HSPs)
scaffold0002 (3-93)||(331831-331922)
scaffold0002 (1-87)||(331950-332037)
[»] scaffold0131 (3 HSPs)
scaffold0131 (12-93)||(11237-11318)
scaffold0131 (109-153)||(11166-11210)
scaffold0131 (11-87)||(11356-11432)
[»] scaffold0978 (2 HSPs)
scaffold0978 (1-93)||(1163-1256)
scaffold0978 (1-87)||(1282-1369)
[»] scaffold0116 (1 HSPs)
scaffold0116 (160-194)||(9840-9874)
[»] scaffold0053 (1 HSPs)
scaffold0053 (160-194)||(8740-8774)
[»] scaffold0003 (1 HSPs)
scaffold0003 (111-149)||(303934-303972)
[»] scaffold0027 (1 HSPs)
scaffold0027 (160-193)||(46625-46658)
[»] scaffold0652 (1 HSPs)
scaffold0652 (162-190)||(547-575)
[»] scaffold0171 (1 HSPs)
scaffold0171 (164-192)||(23371-23399)
[»] scaffold0021 (1 HSPs)
scaffold0021 (160-192)||(130426-130458)


Alignment Details
Target: scaffold0049 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 154 - 288
Target Start/End: Complemental strand, 63747 - 63613
Alignment:
Q  154 ccggtatccggtgtccgtgtccgtatccgtgcttcataggtagtaatcttcaaagctatgacaaattttgataagaatttcctatgataaaagtaaagca 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  63747 ccggtatccggtgtccgtgtccgtatccgtgcttcataggtagtaatcttcaaagctatgacaaattttgataagaatttcctatgataaaagtaaagca 63648  T
Q  254 tatgcaattttcggacctgccatttactgcctatg 288  Q
    ||||||||||||||||| |||||||||||||||||    
T  63647 tatgcaattttcggaccggccatttactgcctatg 63613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 24797060 - 24797213
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  24797060 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttta 24797159  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| ||||||||||||||||||||||||||||||||||||||||||    
T  24797160 aatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 24797213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 41837961 - 41838114
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  41837961 ccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 41838060  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||| |||||||||||||||||||||||||||||||||||||||||    
T  41838061 aatttttccgggcgggccgtggcccaccccagcccatgaagggctccgccactg 41838114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 3886787 - 3886942
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  3886787 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 3886886  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
           |||||||  |||||||| |||||||||||||||||||||||||||||||    
T  3886887 aatttttccgggtgaaccgtggcctaccccagcccatgaagggctccgccactgcc 3886942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 7012490 - 7012337
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| ||||          
T  7012490 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataagatatcgcaaaatagacctataatcattgatttttt 7012391  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  7012390 aatttttccgagtgagccgtggcccaccccagcccatgaagggctccgccactg 7012337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 9830760 - 9830607
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||||||||          
T  9830760 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaagttgcataaaatctcgcaaaataaacctataatcgttgatttttt 9830661  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            ||||||||||||||||||||||||||||||||||||||||||||||    
T  9830660 aattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 9830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5590180 - 5590330
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||          
T  5590180 ccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttgatttttt 5590279  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
           |||||||||||||||||||||||||||||| |||||||||||||    
T  5590280 aatttttccgggtgggccgtggcccaccccagcccattaagggctccgcca 5590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3659829 - 3659982
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| | || ||||||||||||||||||| ||||||||||| ||||||||||||          
T  3659829 ccactacaccactttgcaggaatttggatcaaccaaaacgtaaacctgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttat 3659928  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||| |||||||| |||||||||||||||||||||||||||    
T  3659929 aatttttccgggtgggctgtggcccatcccagcccatgaagggctccgccactg 3659982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4231372 - 4231220
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||          
T  4231372 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttgatttttt 4231273  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  4231272 aattttt-cgggtgggccgtggcccaccctagcccatgaaggggtccgccactg 4231220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6317029 - 6316877
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||| |||||          
T  6317029 ccactacaccactttgcaagaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataattgttgatttttt 6316930  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccact 152  Q
            |||||||||||||||||||||||||||||||| ||||||||||||    
T  6316929 aattttttcgggtgggccgtggcccaccccagcccatgaaaggctccgccact 6316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 42556112 - 42556193
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  42556112 tttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 42556193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 1098210 - 1098057
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||          
T  1098210 ccactacaccactttataggaatttggatcaaccaaaacataaaactgatacaaaattgcataaaatatcgcaaattagacctataatcgttgatttttt 1098111  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||||||||||||||||||| ||  |||||||||||||||||||||    
T  1098110 aatttttccgggtgggccgtggcccacctcacgccatgaagggctccgccactg 1098057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22658353 - 22658446
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  22658353 ccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgttga 22658446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28565037 - 28564944
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  28565037 ccactacaccactttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 28564944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28572660 - 28572567
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  28572660 ccactacaccactttgcaagaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 28572567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 7242653 - 7242734
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||||||    
T  7242653 tttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgttga 7242734  T

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Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21434992 - 21434899
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| || |||||||| |||||||||||||||    
T  21434992 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaacctcgcaaaataaacctataatcgttga 21434899  T

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Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 43117489 - 43117408
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||||    
T  43117489 tttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattgttga 43117408  T

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Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 1183958 - 1183823
Alignment:
Q  17 aggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtgggc 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |                | |||||    
T  1183958 aggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatctataatcgtttattttttaattttttttgttgggc 1183859  T
Q  117 cgtggcccaccccagcccatgaagggctccgccact 152  Q
    ||||||||||||||||||||||||||||||||||||    
T  1183858 cgtggcccaccccagcccatgaagggctccgccact 1183823  T

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Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10092407 - 10092315
Alignment:
Q  1 ccactacaccattt-gcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttg 92  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  10092407 ccactacaccattttgcaggaatttggatcaactaaaacaaaaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttg 10092315  T

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Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 38567270 - 38567127
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnncc-gg 110  Q
    ||||||||||||||||||||| ||||||||||| | | ||||||||||||||||||| |||||||| |||||||||||||||             || ||    
T  38567270 tttgcaggaatttggatcaacaaaaacataaaatcaacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttcctgg 38567171  T
Q  111 gtgggccgtggccca-ccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38567170 gtgggccgtggcccacccccagcccatgaagggctccgccactg 38567127  T

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Target: chr8; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4697959 - 4697872
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||||    
T  4697959 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgtaaagtaaacctataat 4697872  T

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Target: chr8; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 2317202 - 2317121
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||    
T  2317202 tttgcatgaatttggatcaaccaaaacataaaaccaacacaaaattgtataaaatctcgcaaaatagacctataatcgttga 2317121  T

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Target: chr8; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7413184 - 7413091
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  7413184 ccactacaccactttgcgggaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttga 7413091  T

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Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36060510 - 36060417
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||| |||||||||||||||    
T  36060510 ccactacaccactttccaggaatttggatcaaccaaaacataaaattgacacaaaattgcataaaatctcgcaaaatatacctataatcgttga 36060417  T

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Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 41388157 - 41388065
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||    
T  41388157 cactacaccactttgcaggaatttggataaaccaaatcataaaaccgacacaaaattgtataaaatcttgcaaaataaacctataatagttga 41388065  T

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Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21435105 - 21435018
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  21435105 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctagcaaaatagacctataat 21435018  T

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Target: chr8; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38567395 - 38567306
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcg 89  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||||    
T  38567395 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcg 38567306  T

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Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 43117604 - 43117528
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  43117604 atttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 43117528  T

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Target: chr8; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 197344 - 197265
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgt 90  Q
    |||||||| |||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||||||||||||||    
T  197344 atttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgt 197265  T

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Target: chr8; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 312181 - 312102
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgt 90  Q
    |||||||| |||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||||||||||||||    
T  312181 atttgcagaaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgt 312102  T

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Target: chr8; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5590067 - 5590154
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  5590067 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 5590154  T

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Target: chr8; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7242529 - 7242616
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||| ||||||    
T  7242529 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 7242616  T

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Target: chr8; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36060623 - 36060536
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  36060623 ccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36060536  T

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Target: chr8; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 3886685 - 3886761
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||| |||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  3886685 atttgcgggaattgggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 3886761  T

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Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1184088 - 1184001
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||| ||||||||||||    
T  1184088 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaattagacctataat 1184001  T

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Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7422073 - 7422148
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||||||||| |||  ||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||    
T  7422073 ggaatttggatcaaccgaaatctaaaaccgacacaaaattgtataaaatctcgcaaaataaacctataatcgttga 7422148  T

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Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28565150 - 28565063
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  28565150 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 28565063  T

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Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28572773 - 28572686
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  28572773 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 28572686  T

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Target: chr8; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 25642758 - 25642823
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    |||||||||||||||||||| ||||||||| ||||||||  ||||||||| |||||||||||||||    
T  25642758 gaatttggatcaaccaaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagacctat 25642823  T

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Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 34934370 - 34934415
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34934370 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 34934415  T

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Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 7012592 - 7012516
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||  |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  7012592 atttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 7012516  T

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Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2317327 - 2317240
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||  ||||||||| | ||||||| ||||||| | ||||||||||||||||||    
T  2317327 ccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatatcgcaaaatagacctataat 2317240  T

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Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3659716 - 3659803
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | ||||| |||||||| |||| ||||||||||| ||||||| ||||||||| |||||| |||||||||||    
T  3659716 ccactacaccaatttgcggaaattttgatcaaccgaaacctaaaaccgatataaaattgtataaaatctcgcaaaacagacctataat 3659803  T

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Target: chr8; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22658240 - 22658327
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||  |||||| ||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  22658240 ccactacaccaatttgtgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22658327  T

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Target: chr8; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41169964 - 41169877
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||| ||||||||| || |||||| | ||||||  ||||||||| ||||||||||||||||||    
T  41169964 ccactacaccactttgcgggaatttggattaaccaaaacctagaaccgacataaaattatataaaatctcgcaaaatagacctataat 41169877  T

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Target: chr8; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41837848 - 41837935
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||| ||| | ||||||| |||||||||  ||||||| |||||||||    
T  41837848 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaacctataat 41837935  T

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Target: chr8; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42555987 - 42556074
Alignment:
Q  1 ccactacaccat-ttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||  |||| |||||||||||||||| |||  ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  42555987 ccactacaccaaattgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 42556074  T

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Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 4231484 - 4231398
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| | ||||||||||||||||    
T  4231484 cactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgtaaaatagacctataat 4231398  T

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Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 41388269 - 41388184
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||| ||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  41388269 actacaccaatttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 41388184  T

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Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 10092509 - 10092433
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||| |||||||| ||||| ||| | ||||||| ||||||||| |||||||||| |||||||    
T  10092509 atttgcgggaatttggatctaccaaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 10092433  T

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Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36108921 - 36108837
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||||||||| ||||| ||||||||||||| || |||| ||||||||  |||| |||| ||| |||||||||||||||||||||    
T  36108921 ccactacaccactttgcgggaatttggatcagcccaaacctaaaaccgtcacaacattgtatagaatcttgcaaaatagacctat 36108837  T

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Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1098323 - 1098236
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||||| |||||||||||||| |||| |||||| || | ||| ||| |||||||||  |||||||||||||||||    
T  1098323 ccactacaccaatttgcagaaatttggatcaaccgaaacctaaaactgacataaatttgtataaaatctcacaaaatagacctataat 1098236  T

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Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4698072 - 4697985
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||| |||| |||  ||||||||| | ||||||| ||||||||| |||||||||| |||||||    
T  4698072 ccactacaccaatttgcgggaatttggataaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 4697985  T

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Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 8996478 - 8996417
Alignment:
Q  23 ttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||| | |||||| ||||||    
T  8996478 ttggatcaacctaaacttaaaaccgacacaaaattgcataaaatctcgtaaaataaacctat 8996417  T

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Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 11635803 - 11635758
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  11635803 cgggtgggtcgtggcccaccctagcccatgaagggctccgccactg 11635758  T

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Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 25383064 - 25383135
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    |||||||||||||| ||||| ||||||||| |||||| |  ||||||||| |||||||||||||||| |||||    
T  25383064 gaatttggatcaactaaaacctaaaaccgacacaaaa-tatataaaatctcgcaaaatagacctatagtcgtt 25383135  T

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Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 8995104 - 8995039
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||||||||||  |||||| | ||||||||||||| ||| |||||||||  ||||||||||||||    
T  8995104 gaatttggatcagacaaaaccttaaaccgatacaaatttgtataaaatctctcaaaatagacctat 8995039  T

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Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 10092292 - 10092255
Alignment:
Q  118 gtggcccaccccagcccatgaagggctccgccactgcc 155  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10092292 gtggcccaccccagcccatgaagggctccgtcactgcc 10092255  T

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Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 192
Target Start/End: Original strand, 3951609 - 3951644
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3951609 gtatctggtgtccgtgtccgtatccgtgcttcatag 3951644  T

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Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6317142 - 6317055
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||| || |||| ||||| ||| | ||||||| ||||| ||| |||||||| | |||||||    
T  6317142 ccactacaccaatttgcgggaatttggatcatccgaaacctaaaatcgacataaaattgtataaattctcgcaaaataaaactataat 6317055  T

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Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24796947 - 24797034
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||||||||||| |||| ||||| ||| | ||||||| ||||||||| ||||| || | |||||||    
T  24796947 ccactacaccaatttgcggtaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaattatatctataat 24797034  T

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Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 32018002 - 32018073
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    |||||||| ||||| |||  ||||| ||| ||||||||| |||||||||   ||||||||||||||||||||    
T  32018002 aatttggaccaaccgaaatctaaaatcgacacaaaattgtataaaatctcttaaaatagacctataatcgtt 32018073  T

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Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 192
Target Start/End: Original strand, 20785544 - 20785574
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||    
T  20785544 cggtgtccgtgtccgtatccgtgcttcatag 20785574  T

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Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 7413279 - 7413211
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||| ||||||| |||| ||||||||| | |||| || ||||||||| | ||||||||||||||||    
T  7413279 ggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 7413211  T

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Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 11635892 - 11635819
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||||  | |||| ||||||||| ||||||||  ||||||| | ||||||||||||||| ||| ||||    
T  11635892 aatttggatcagtcgaaacctaaaaccgacacaaaattatataaaatttcgcaaaatagacctatgatcattga 11635819  T

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Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 192
Target Start/End: Original strand, 24413646 - 24413675
Alignment:
Q  163 ggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||||||||||||||||||    
T  24413646 ggtgtccgtgtccgtatccgtgcttcatag 24413675  T

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Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 36450823 - 36450852
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||||||||||||||||||||||||||    
T  36450823 gtgtccgtgtccgtatccgtgcttcatagg 36450852  T

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Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 5137490 - 5137518
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  5137490 gtgtccgtgtccgtatccgtgcttcatag 5137518  T

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Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 43737896 - 43737928
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||| |||||||||||||||||    
T  43737896 tccggtgtccgtgtctgtatccgtgcttcatag 43737928  T

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Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 18163868 - 18163715
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnn 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||            
T  18163868 actacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgaataaaatctcgcaaaatagacctataatcgttgattttttta 18163769  T
Q  102 nnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18163768 tttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 18163715  T

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Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 29126050 - 29126203
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  29126050 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 29126149  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  29126150 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 29126203  T

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Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 50527640 - 50527793
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||          
T  50527640 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataaacgttgatttttt 50527739  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            ||||||||||||||||||||||||||||||||||||||||||||||    
T  50527740 aattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 50527793  T

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Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 52571431 - 52571584
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||          
T  52571431 ccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaattagacctataatcgttgatttttt 52571530  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  52571531 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 52571584  T

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Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 52202133 - 52201981
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||           
T  52202133 cactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgatttttta 52202034  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
          |||||||||||||| ||||||||||||||||||||||||||||||||    
T  52202033 atttttccgggtgggccgtgacccaccccagcccatgaagggctccgccactg 52201981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22729372 - 22729222
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||          
T  22729372 ccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgaaaaatagacctatagtcgttgatttttt 22729273  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
           |||||||||||||||||||||||||||||| |||||||||||||    
T  22729272 aatttttccgggtgggccgtggcccaccccagcccattaagggctccgcca 22729222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 36633636 - 36633486
Alignment:
Q  4 ctacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnn 102  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  |||||||||||||||||||||||             
T  36633636 ctacaccactttgcaggaatttggatcaaccaaaacataaaatcgatacaaaattgtataaaatctcacaaaatagacctataatcgttgattttttaat 36633537  T
Q  103 nnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
        |||| |||| |||||||||||||||||||||||||||||||||||||    
T  36633536 ttttccggatgggtcgtggcccaccccagcccatgaagggctccgccactg 36633486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 12251514 - 12251667
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||  |||||||||||||||||||||||          
T  12251514 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattatataaaatctcacaaaatagacctataatcgttgattttta 12251613  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12251614 aatttttccgggtgggccgtggtccaccccagcccatgaagggctctgccactg 12251667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1092884 - 1093031
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |||| |||||||          
T  1092884 ccactacaccactttacaggaatttggatcaaccaaaacataaaacccacacaaaattgcataaaatctcgcaaaatagacttatagtcgttgatttttt 1092983  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccg 147  Q
           ||||||||||||||||||||| |||||||||||||||||||    
T  1092984 aatttttccgggtgggccgtggcccacctcagcccatgaagggctccg 1093031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7160297 - 7160451
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| ||||||||||| |||| |||| |||||| || |||||||| |||||||||| ||||||||||||||||||||||||          
T  7160297 ccactacaccaatttgcgggaatttggattaaccgaaacctaaaactgacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttttt 7160396  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7160397 aatttttccgggtgggccgtggcccaccccagcccatgaaaggctccgccactgc 7160451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 28952418 - 28952552
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtgggccgt 119  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||             || |||||  |||    
T  28952418 aatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacccataatcgttgattttttaatttttccaggtggatcgt 28952517  T
Q  120 ggcccaccccagcccatgaagggctccgccactgc 154  Q
    |||||||||||||||||||||||||||||||||||    
T  28952518 ggcccaccccagcccatgaagggctccgccactgc 28952552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 13594880 - 13595033
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||          
T  13594880 ccactacaccactttgtaggaatttgaatcagccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcgttgatttttt 13594979  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            | ||||||||||||||||||||||||||||| ||||||||||||||    
T  13594980 aattttttcaggtgggccgtggcccaccccagcccatgacgggctccgccactg 13595033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11232161 - 11232249
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatc 88  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  11232161 ccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatc 11232249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 32270926 - 32271074
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||  |||||| ||||          
T  32270926 ccactacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagac--ataatcattgatttttt 32271023  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
           |||||||||| |||||||||||||||||||||| ||||||||||    
T  32271024 aatttttccgggtgggctgtggcccaccccagcccatgaaaggctccgcca 32271074  T

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Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 21259442 - 21259591
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||||           
T  21259442 cactacaccactttgcaggaatttgaatcaaccaaaacataaaatcgacacaaaattgcataaaatctcacaaaatagacctataatcgttgatttttaa 21259541  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
          |||| |||| |||||||||| ||| |||||||||||||||||||    
T  21259542 atttttccggatgggtcgtggcccactccaacccatgaagggctccgcca 21259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27742638 - 27742545
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||    
T  27742638 ccactacaccactttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctctcaaaatagacctataagcgttga 27742545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 49169933 - 49169791
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||||||||             | |||    
T  49169933 tttgcagaaattcggatcaaccaaaacataaaaccgacacaaaattgtataaaatttcgcaaaatagacctataatcgttgatttttttacttttctggg 49169834  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
    ||||  ||||||||||||||||||| |||||||||||||||||    
T  49169833 tgggttgtggcccaccccagcccataaagggctccgccactgc 49169791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44254607 - 44254700
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||| ||||    
T  44254607 ccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatatataatcattga 44254700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16908825 - 16908969
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||||||||||          
T  16908825 ccactacaccactttgctggaatttggatcaaccaaaacataaaaccga----------cataaaatctcgcaaaatagacctataatcgttgaattttt 16908914  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16908915 tatttttccgggtgggccgtggcccaccccagcccatgaagggctctgccactgc 16908969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35083945 - 35083857
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatc 88  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||    
T  35083945 ccactacaccactttacaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaattgacctataatc 35083857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13594767 - 13594854
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  13594767 ccactacaccaatttgcgggaatttggatcaaccgaaacataaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13594854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32270813 - 32270900
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  32270813 ccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 32270900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 44205553 - 44205471
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaa-ttgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||| ||||||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||    
T  44205553 tttgcaagaatttggatcaaccaacacataaaaccgacacaaaaattgcataaaatctcgcaaaatagatctataatcgttga 44205471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 49657218 - 49657311
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||| |   |||||||||||||| |||||||    
T  49657218 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacgtaaaattgcataaaatttcaaaaaatagacctatagtcgttga 49657311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11232048 - 11232135
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  11232048 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 11232135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22729485 - 22729398
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  22729485 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22729398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44254494 - 44254581
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  44254494 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4618301 - 4618210
Alignment:
Q  1 ccactacaccatttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||  |||| | || ||||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  4618301 ccactacacactttgaaagagtttggatcaacaaaaa-ataaaaccgacacaaaattgtataaaatcttgcaaaatagatctataatcgttga 4618210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16908712 - 16908799
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||| | |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  16908712 ccactacaccaatttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctagcaaaatagacctataat 16908799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28952285 - 28952372
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||| ||||    
T  28952285 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctgtaat 28952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29125937 - 29126024
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||| | ||||||||| ||||||||||||||||||    
T  29125937 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 29126024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36633752 - 36633665
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||||| | ||||||| |||| |||| ||||||||||||||||||    
T  36633752 ccactacaccaatttgcaggaatttggatcaaccgaaatctaaaaccgacataaaattgtataatatctcgcaaaatagacctataat 36633665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49657105 - 49657192
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||| |||||||    
T  49657105 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 49657192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 50527527 - 50527614
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||  ||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  50527527 ccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 50527614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25246231 - 25246324
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| |||||||||||||||| |||| |||||  || | ||||||| ||||||||| ||||||||||||||||| ||||||    
T  25246231 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaaagacataaaattgtataaaatctcgcaaaatagacctataaacgttga 25246324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21259225 - 21259301
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||||||| | ||||||  ||||||||| ||||||||||||||||||    
T  21259225 atttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaatagacctataat 21259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21259339 - 21259415
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||||||| | ||||||  ||||||||| ||||||||||||||||||    
T  21259339 atttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattatataaaatctagcaaaatagacctataat 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 35084047 - 35083971
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||||| | | ||||||| ||||||||| ||||||||||||||||||    
T  35084047 atttgcgggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 35083971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1092771 - 1092858
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| |||||||||   ||||||| ||||||||| |||||||||| |||||||    
T  1092771 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcgcaaaatagatctataat 1092858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27742751 - 27742664
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||| | |||||| ||||||||| |||| ||||| ||| | ||||||| ||||||||||||||||||||||||||||    
T  27742751 ccactacaccaatttacgggaattgggatcaaccgaaacctaaaaacgacataaaattgtataaaatcttgcaaaatagacctataat 27742664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34660898 - 34660807
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||||  ||||||||||| ||||||| ||||||||| ||||||||  ||||||||| | ||||||||||||| ||||||    
T  34660898 ccactacaccactttgcaaaaatttggatcagccaaaacctaaaaccgacacaaaattatataaaatctcgtaaaatagacctatgatcgtt 34660807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 45045475 - 45045388
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||||||||||||||| || | |||| ||||||| | | ||||||| ||||||||| ||||||||||||||||||    
T  45045475 ccactacaccactttgcaggaatttggattaatcgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 45045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31174566 - 31174632
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaat 66  Q
    ||||||||||| |||||  |||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  31174566 ccactacaccactttgctagaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaat 31174632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 744116 - 744032
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||||||||||| |||| |||| ||||   ||||||| |||||||||| |||||||||||||||||    
T  744116 actacaccaatttgcgggaatttggatcaaccgaaacctaaa-ccgacgtaaaattgtataaaatcttccaaaatagacctataat 744032  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 49170040 - 49169971
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||| | |||| ||||||||| | ||||||| ||||| |||||||||||||||| |||||    
T  49170040 ggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaagtcttgcaaaatagacccataat 49169971  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 12251412 - 12251488
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||  ||||| ||| | ||||||| ||||| ||| ||||||||||||||||||    
T  12251412 atttgctggaatttggatcaaccgaaatctaaaatcgacataaaattgtataaattctcgcaaaatagacctataat 12251488  T

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Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 148
Target Start/End: Original strand, 7441702 - 7441737
Alignment:
Q  113 gggccgtggcccaccccagcccatgaagggctccgc 148  Q
    ||||||||||||||||||||||||||||||||||||    
T  7441702 gggccgtggcccaccccagcccatgaagggctccgc 7441737  T

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Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 750702 - 750736
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||||||||||||||||    
T  750702 tccggtgtccgtgtccgtatccgtgcttcataggt 750736  T

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Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 2618925 - 2618884
Alignment:
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  2618925 tgggccgtggcccacctcaacccatgaagggctccgccactg 2618884  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 743998 - 743958
Alignment:
Q  16 caggaatttggatcaaccaaaacataaaaccgatacaaaat 56  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  743998 caggaattttgatcaaccaaaacataaaaccgacacaaaat 743958  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 14027991 - 14027959
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  14027991 tccggtgtccgtgtccgtatccgtgcttcatag 14027959  T

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Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 191
Target Start/End: Original strand, 17568753 - 17568784
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcata 191  Q
    ||||||||||||||||||||||||||||||||    
T  17568753 tccggtgtccgtgtccgtatccgtgcttcata 17568784  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 25246343 - 25246386
Alignment:
Q  110 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||| |||||||||||||||| |||||| |||||||||||||    
T  25246343 ggtgggtcgtggcccaccccagctcatgaaaggctccgccactg 25246386  T

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Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 7171478 - 7171444
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||||||| |||||||||||||||||||||||||    
T  7171478 tccggtgtctgtgtccgtatccgtgcttcataggt 7171444  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 192
Target Start/End: Original strand, 13845584 - 13845614
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||    
T  13845584 cggtgtccgtgtccgtatccgtgcttcatag 13845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 35994820 - 35994854
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||| ||||||||||||||||||||||||    
T  35994820 tccggtgtccatgtccgtatccgtgcttcataggt 35994854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2619035 - 2618953
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||||||||| ||||||||| |||| ||||||  |||| ||||||| | ||||  ||| ||||||||| |||||||||||||||    
T  2619035 ccactacaccactttgcaggagtttgaatcaacagaaacttaaaaccaacacaa--ttgtataaaatctcgcaaaatagacctat 2618953  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 16000101 - 16000130
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcata 191  Q
    ||||||||||||||||||||||||||||||    
T  16000101 cggtgtccgtgtccgtatccgtgcttcata 16000130  T

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Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 21479100 - 21479067
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    |||||||||||||||||||||| |||||||||||    
T  21479100 tccggtgtccgtgtccgtatccatgcttcatagg 21479067  T

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Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 34660794 - 34660753
Alignment:
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  34660794 tgggccgtggcccaccccaatccatgaagagctccgccactg 34660753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 3164108 - 3164140
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||| |||||||||||||||||    
T  3164108 tccggtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 10318123 - 10318155
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||| ||||||||||||||||||    
T  10318123 tccggtgtccgtgttcgtatccgtgcttcatag 10318155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 10335369 - 10335401
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||| ||||||||||||||||||    
T  10335369 tccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 14747543 - 14747511
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||| ||||||||||||||||||||    
T  14747543 tccggtgtccgtatccgtatccgtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 15796377 - 15796409
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||| ||||||||||||||||    
T  15796377 tccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 23870622 - 23870650
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  23870622 gtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 45451551 - 45451523
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  45451551 gtgtccgtgtccgtatccgtgcttcatag 45451523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 34983428 - 34983277
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  34983428 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttc 34983329  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
           |||||||||||||||||||||||||||||||||||||||||||||    
T  34983328 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccac 34983277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 38527324 - 38527173
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnn 101  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||            
T  38527324 actacaccactttgcaggaatttggatcaaccaagacataaaaccgatacaaaattgcataaaatctcacaaaatagacctataatcgttgattttttta 38527225  T
Q  102 nnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
         |||||||||||||||||||||||||||||||||||||||||||||||    
T  38527224 tttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 38527173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 38763866 - 38763711
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||          
T  38763866 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgctaaatagacctataatcgttgatttttt 38763767  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
           ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38763766 aatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccactgcc 38763711  T

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Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 23869803 - 23869661
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||             | |||    
T  23869803 tttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttcgggg 23869704  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  23869703 tgggccgtggcccaccccagcccatggagggctccgccactgc 23869661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 13615969 - 13616122
Alignment:
Q  1 ccactacaccattt-gcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||||          
T  13615969 ccactacaccattttgcaggaatttggatcaaccaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 13616068  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||||||||||||||||||||||||||||||| | |||||||||||    
T  13616069 aatttttccgggtgggccgtggcccaccccagcccatgaaagactccgccactg 13616122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2249733 - 2249578
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||          
T  2249733 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagatctataatcattgatttttt 2249634  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
            |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2249633 aattttttcgggtgggtcgtggcccaccccagcccatgaagggctccgccactgcc 2249578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 22674746 - 22674899
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| ||||||||||||| || |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  22674746 ccactacaccaatttgcgggaatttggatcagccgaaacctaaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 22674845  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||||||||||||| |||||||||||||||||||||||||||||||    
T  22674846 aatttttccgggtgggccgtggtccaccccagcccatgaagggctccgccactg 22674899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26293312 - 26293221
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  26293312 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgtt 26293221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 34494481 - 34494634
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||          
T  34494481 ccactacaccactttgcaggaatttggatcaacaaaaacataaaaccgatacaaaattgcataaaatctcgcaaaagagacctataatcgttgatttttt 34494580  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           | || ||| ||||||||||||| ||||||||| ||||||||||||||    
T  34494581 aatttttctggatggaccgtggcccaccctagcccatgatgggctccgccactg 34494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 36436188 - 36436341
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||| |||||||||| |          
T  36436188 ccactacaccactttgcaggaatttggatcaagcaaaacataaaaccgacacaaaattgcataaaatatcgcaaaatagacttataatcgttaatttttt 36436287  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
             |||||||||||||||||||||||||||||||||||||||||||||    
T  36436288 aatttttttgggtgggccgtggcccaccccagcccatgaagggctccgccactg 36436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 6750013 - 6750165
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||    |||||||||||||||||||||           
T  6750013 cactacaccactttgcagaaatttggatcaatcaaaacataaaaccaacacaaaattgcataaaatctcaataaatagacctataatcgttgatttttaa 6750112  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
          |||||||||||||||||||||||||||||||||||||||||||||||    
T  6750113 atttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6750165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12995118 - 12995025
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  12995118 ccactacaccaatttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacctataatcgttga 12995025  T

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Target: chr2; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 28745499 - 28745653
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |          
T  28745499 ccactacaccactttgcaggaatttggat-aaccaaaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaatttttt 28745597  T
Q  100 nnnnnnncc--gggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||  |||||||||||||||||||||||||||||||||||||||||||||    
T  28745598 aattttcccgggggtgggccgtggcccaccccagcccatgaagggctccgccactg 28745653  T

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Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1115044 - 1115197
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||  ||||          
T  1115044 ccactacaccactttgcagaaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataattgatttttt 1115143  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  1115144 aatttttccgagtggaccgtggcccaccccagcccatgaagggctccgccactg 1115197  T

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Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 44545747 - 44545888
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||| | ||||||||||||||||||||||||             |||||    
T  44545747 tttgcaagaatttggatcaaccaaaatataaaaccgacacaaaattgtataaaatatcgcaaaatagacctataatcgttgatttttttatttttccggg 44545846  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||| ||||||||||||||| ||||||||||||||||||||||    
T  44545847 tggaccgtggcccaccccaacccatgaagggctccgccactg 44545888  T

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Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11764946 - 11764853
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  11764946 ccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgacacaaagttgtataaaatcttgcaaaatagacctataatcgttga 11764853  T

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Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31392699 - 31392606
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||    
T  31392699 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacttataatcgttga 31392606  T

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Target: chr2; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1021074 - 1021229
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||  ||||          
T  1021074 ccactacaccactttgcaggaatttggatcaaccaaatcataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataataattgatttttt 1021173  T
Q  100 nnnnnnnc-cgggt-gggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1021174 aatttttctcgggtggggccgtggcccaccccagcccatgaagggctccgccactg 1021229  T

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Target: chr2; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 19283937 - 19284029
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  19283937 cactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagatttataatcgttga 19284029  T

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Target: chr2; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 42016644 - 42016562
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||  |||||||||||||||||||||||    
T  42016644 atttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcacaaaatagacctataatcgttga 42016562  T

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Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16194404 - 16194311
Alignment:
Q  1 ccactacaccatt-tgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||    
T  16194404 ccactacaccactctgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacttataatcgttga 16194311  T

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Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 41699325 - 41699185
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgg 110  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||||||             ||||    
T  41699325 atttgcgggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttgattttttaatttttccgg 41699226  T
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
     ||||||||| ||||||| |||||||| |||||||||||||    
T  41699225 atgggccgtgacccacccgagcccatggagggctccgccac 41699185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 7366303 - 7366150
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||  | ||||||||||||||||||| |||||||||||||||| |||||||          
T  7366303 ccactacaccactttgcaggaatttggatcaagcaaaacataaaactcacacaaaattgcataaaatctcgcaaaatagacctatagtcgttgatttttt 7366204  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            ||| |||||||||||||||| |||||||| || |||||||||||||    
T  7366203 tattttttcggatgggccgtggcccacctcagcccataaaaggctccgccactg 7366150  T

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Target: chr2; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26860668 - 26860761
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||    
T  26860668 ccactacaccactttgtagaaatttggatcaaccaaaacataaaaccgacacgaaattgcataaaatctcgcaaaatagacctataattgttga 26860761  T

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Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 43471462 - 43471553
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||| |||||  ||||||||||||| |||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  43471462 actacaccactttgcgagaatttggatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttga 43471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 42016757 - 42016681
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  42016757 atttgcgggaatttggatcaaccaaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 42016681  T

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Target: chr2; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6749899 - 6749986
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||| | ||||||||||||||||||    
T  6749899 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatatcgcaaaatagacctataat 6749986  T

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Target: chr2; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13615856 - 13615943
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | ||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  13615856 ccactacaccaatttgcggaaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13615943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 34983540 - 34983454
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  34983540 cactacaccaatttgctggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 34983454  T

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Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 16194515 - 16194430
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  16194515 actacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 16194430  T

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Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 11935401 - 11935473
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    |||||||||||||||||||  ||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||    
T  11935401 gaatttggatcaaccaaaatctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcgtt 11935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 38763960 - 38763892
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  38763960 gaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 38763892  T

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Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1114931 - 1115018
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||| | | | ||||||| ||||||||| ||||||||||||||||||    
T  1114931 ccactacaccaatttgcaggaatttggatcaaccgaaacctaaaatcaacataaaattgtataaaatctcgcaaaatagacctataat 1115018  T

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Target: chr2; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2249846 - 2249759
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||| | ||||||||| ||||||||||||||||||    
T  2249846 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 2249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11765059 - 11764972
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||| |  |||||||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  11765059 ccactacaccaatttgcgggaatttggatcagctgaaacataaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 11764972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23869928 - 23869841
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||| |||||||||    
T  23869928 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatatacctataat 23869841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26293425 - 26293338
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||| | ||||||||| ||||||||||||||||||    
T  26293425 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 26293338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36436075 - 36436162
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  36436075 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 36436162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44545622 - 44545709
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||| | | ||||||| ||||||||| ||||||||||||||||||    
T  44545622 ccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 44545709  T

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Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 3836347 - 3836431
Alignment:
Q  2 cactacaccattt-gcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctata 85  Q
    |||||||||| || || ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| | |||||||| |||||    
T  3836347 cactacaccacttcgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagatctata 3836431  T

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Target: chr2; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38527438 - 38527352
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||| |||||||||    
T  38527438 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaata-acctataat 38527352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 1020963 - 1021048
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||| ||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  1020963 actacaccaatttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctctcaaaatagacctataat 1021048  T

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Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 26860566 - 26860642
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| | |||| ||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  26860566 atttgcggaaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 26860642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7366416 - 7366337
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaataga 79  Q
    ||||||||||| ||||| |||||||||||||| | |||| ||||||||| | ||||||| ||||||||| ||||||||||    
T  7366416 ccactacaccaatttgcgggaatttggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaataga 7366337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 11935280 - 11935355
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||| |||||||||||||||| |||  ||||||||| | ||||||| |||||| || ||||||||||||||||||    
T  11935280 tttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaacctcgcaaaatagacctataat 11935355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12995231 - 12995144
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||| ||||||| |||| ||||||||| | ||| ||| |||||||||| |||||||||||||||||    
T  12995231 ccactacaccaatttgcggaaatttgaatcaaccgaaacctaaaaccgacataaatttgtataaaatcttacaaaatagacctataat 12995144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28745386 - 28745473
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||| ||||||||||||  ||||||||  | ||||||  ||||||||| ||||||||||||||||||    
T  28745386 ccactacaccaatttgcgggaatttagatcaaccaaaatctaaaaccggcataaaattatataaaatctcgcaaaatagacctataat 28745473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31392811 - 31392724
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||  ||||| ||||||| | |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  31392811 ccactacaccaatttgcgagaattgggatcaatcgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 31392724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 17526052 - 17526123
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||| ||||||| ||||| |||||| || || |||||| ||||||||| |||||||||| |||||||||||    
T  17526052 aatttagatcaactaaaacctaaaactgacactaaattgtataaaatctcgcaaaatagatctataatcgtt 17526123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 147
Target Start/End: Complemental strand, 42473605 - 42473566
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccg 147  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  42473605 cgggtgagccgtggcccaccccagcccatgaagggctccg 42473566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 26769493 - 26769459
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||||||||||||||||    
T  26769493 tccggtgtccgtgtccgtatccgtgcttcataggt 26769459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 27447084 - 27447118
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||||||||||||||||    
T  27447084 tccggtgtccgtgtccgtatccgtgcttcataggt 27447118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 12995007 - 12994975
Alignment:
Q  120 ggcccaccccagcccatgaagggctccgccact 152  Q
    |||||||||||||||||||||||||||||||||    
T  12995007 ggcccaccccagcccatgaagggctccgccact 12994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 21374777 - 21374809
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  21374777 tccggtgtccgtgtccgtatccgtgcttcatag 21374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 2076971 - 2076934
Alignment:
Q  113 gggccgtggcccaccccagcccatgaagggctccgcca 150  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  2076971 gggccgtggcccaccctagccaatgaagggctccgcca 2076934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 27084258 - 27084229
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||||||||||||||||||||||||||    
T  27084258 gtgtccgtgtccgtatccgtgcttcatagg 27084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 32099973 - 32099928
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||  ||||||||||| ||||||||||||||||| ||||||    
T  32099973 cgggtgggttgtggcccaccctagcccatgaagggctccaccactg 32099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 37558967 - 37558938
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||||||||||||||||||||||||||    
T  37558967 gtgtccgtgtccgtatccgtgcttcatagg 37558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 31284024 - 31283992
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||||||||| |||||||||||    
T  31284024 tccggtgtccgtgtccgtatctgtgcttcatag 31283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 44770207 - 44770235
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  44770207 gtgtccgtgtccgtatccgtgcttcatag 44770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 26525235 - 26525388
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||          
T  26525235 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcaaaaaatctcgcaaaatagacctataatcgttgatttttt 26525334  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  26525335 tatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3631411 - 3631256
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||          
T  3631411 ccactacaccactttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 3631312  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
           |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3631311 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 3631256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9737712 - 9737865
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |          
T  9737712 ccactacaccactttgcaggaatttggatcaacaaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttaatttttt 9737811  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  9737812 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 9737865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 25701426 - 25701579
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||          
T  25701426 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattacataaaatcttgcaaaatagatctataatcgttgatttttt 25701525  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| ||||||||||||||||||||||||||||||||||||||||||    
T  25701526 aatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 25701579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 30773031 - 30772878
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  30773031 ccactacaccactttgcaggaatttgaatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgatttttt 30772932  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            |||||| |||||||||||||||| ||||||||||||||||||||||    
T  30772931 aattttttcgggtgagccgtggcccaccccaacccatgaagggctccgccactg 30772878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 43358550 - 43358410
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||             |||||    
T  43358550 tttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttcatttttccggg 43358451  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccact 152  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  43358450 tgggccgtggcccacctcagcccatgaagggctccgccact 43358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 16823282 - 16823133
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||           
T  16823282 cactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttta 16823183  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
          |||| |||||||||||||||||||||||||||||||||||||||    
T  16823182 atttttccggatgggccgtggcccaccccagcccatgaagggctccgcca 16823133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 43348786 - 43348635
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||| |          
T  43348786 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaataaacctataatcgttaatttttt 43348687  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
           |||||||||||||||||| ||||||||||||||||||||||||||    
T  43348686 aatttttccgggtgggccgtggcccgccccagcccatgaagggctccgccac 43348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 13013280 - 13013413
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtgggccgt 119  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||             |||||||||||||    
T  13013280 aatttggatcaaccaaaacataaaactgatacaaaattgcttaaaatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgt 13013379  T
Q  120 ggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||    
T  13013380 ggcccaccccagcccatgaagggctccgccactg 13013413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 29390421 - 29390273
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||| |||||||||||||||          
T  29390421 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgtaaaatacacctataatcgttgatttttt 29390322  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgc 148  Q
           || |||||||||||||||||||||||||||||||||||||||    
T  29390321 aatttttccaggtgggccgtggcccaccccagcccatgaagggctccgc 29390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 8074256 - 8074398
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga-nnnnnnnnnnnnnccgg 110  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||              || |    
T  8074256 tttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttgattttttaaaattttccag 8074355  T
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8074356 gtgggccgtggcccaccccagcccatgaagggctccgccactg 8074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 7440486 - 7440638
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||          
T  7440486 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgatttttt 7440585  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           || |||||||||| ||||| |||| ||||||||||||||||||||||    
T  7440586 aatttttccaggtgggccgtagccca-cccaacccatgaagggctccgccactg 7440638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 15374255 - 15374174
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  15374255 tttgcaagaatttcgatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 15374174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 9596171 - 9596320
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||          
T  9596171 ccactacaccactttgcagaaatttggatcaactaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagacatataatcgttgatttttt 9596270  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcc 149  Q
             |||||||||||||||||||||||||  ||||||||||||||    
T  9596271 aatttttttgggtgggccgtggcccaccccagcctttgaagggctccgcc 9596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 26297014 - 26297167
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||  |||| ||||||||||||||||||||||| |||||          
T  26297014 ccactacaccactttgcgggaatttggatcaaccaaaacctaaaaccgacacaaaattatataagatcttgcaaaatagacctataattgttgatttttt 26297113  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            ||||||| |||||||||| |||||| ||||||||||||||||||||    
T  26297114 aattttttcgggtggaccgtggcccatcccagctcatgaagggctccgccactg 26297167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 13084668 - 13084741
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  13084668 aatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttga 13084741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20656863 - 20656956
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  20656863 ccactacaccaatttgcggaaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgtaaattagacctataattgttga 20656956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 32304670 - 32304751
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||    
T  32304670 tttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgtaaaatagacttataatcgttga 32304751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 19577186 - 19577339
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| ||||||||||||||||||||  || |||||| ||||||||| ||||||| |||||||||||| ||||||||||| |          
T  19577186 ccactacaccactttgcgggaatttggatcaaccaaaatctagaaccgacacaaaattgtataaaatgttgcaaaatagatctataatcgtt-aattttt 19577284  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           |||||||||||||||||||||  |||||||||||||||||||||||||    
T  19577285 tatttttccgggtgggccgtggcccaccttagcccatgaagggctccgccactgc 19577339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7440373 - 7440458
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctata 85  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||    
T  7440373 ccactacaccaatttgcaggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 7440458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10925661 - 10925568
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||    
T  10925661 ccactacaccactttgtaggaatttgaatcaactaaaacataaaaccgatacaaaattacataaaatctcgcaaattagacatataatcgttga 10925568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 5844238 - 5844104
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtgggccgt 119  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||| | ||||||||||||||||||||||             |||| || |||||    
T  5844238 aatttggatcaaccaaaacataaaatcgacaccaaattgcataaaatctagtaaaatagacctataatcgttgattttttaatttttccggatgtgccgt 5844139  T
Q  120 ggcccaccccagcccatgaagggctccgccactgc 154  Q
     |||||||||| ||||| |||||||||||||||||    
T  5844138 agcccaccccaacccattaagggctccgccactgc 5844104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20487124 - 20487033
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||||||||||||||||| || |||| ||||||||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  20487124 ccactacaccactttgcaggaatttggatcagccgaaacctaaaaccgacacaaaattgtataaaatcttgcaaaatatacctatgatcgtt 20487033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 41084587 - 41084738
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| | |||||||||||| |||||| ||||| ||| ||||||||  ||||||||| ||||||||||||||||||||||||          
T  41084587 ccactacaccactttgcggaaatttggatcaatcaaaacctaaaatcgacacaaaattctataaaatctcgcaaaatagacctataatcgttgatttttt 41084686  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  41084687 aatttttccgggtggacc--ggcccaccccagcccatgaagggctccgccactg 41084738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3631524 - 3631437
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  3631524 ccactacaccaatttgcgggaatttggatcaaccaaaacttaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 3631437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32304545 - 32304632
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||| | |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  32304545 ccactacaccaatttccgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 32304632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43348899 - 43348812
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||| | ||||||||| ||||||||||||||||||    
T  43348899 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataat 43348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26525122 - 26525209
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||  |||| | ||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  26525122 ccactacaccaatttgcgggaatttggatcaactgaaaccttaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 26525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30773144 - 30773057
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| |||||||||| |||||||    
T  30773144 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 30773057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26785095 - 26785010
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctata 85  Q
    ||||||||||| ||||| |||||||||||||||  |||| ||||||||| | ||||||| |||||||||  |||||||||||||||    
T  26785095 ccactacaccaatttgcgggaatttggatcaactgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctata 26785010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 28662162 - 28662117
Alignment:
Q  107 ccgggtgggccgtggcccaccccagcccatgaagggctccgccact 152  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  28662162 ccgggtgggccgtggcccaccccagcccataaagggctccgccact 28662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9596058 - 9596145
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||| ||||||  |||| ||||||||| | ||||||| |||||||||  ||||||||| |||||||    
T  9596058 ccactacaccaatttgcaggaatttgaatcaacacaaacctaaaaccgacataaaattgtataaaatctcacaaaatagatctataat 9596145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16823396 - 16823309
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | |||||   ||||||||| |||||||||| |||||||    
T  16823396 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcatataaaatctcgcaaaatagatctataat 16823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25701314 - 25701400
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||  |||||||||||||||| |||| ||||||||| | ||| ||| ||||||||| ||||||||||||||||||    
T  25701314 ccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaa-ttgtataaaatctcgcaaaatagacctataat 25701400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 26784957 - 26784910
Alignment:
Q  107 ccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  26784957 ccgggtgggccgtggcccacctaagcccatgaagggctccgccactgc 26784910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43358675 - 43358588
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||  ||| |||||| || | ||||||| ||||||||| |||||||| |||||||||    
T  43358675 ccactacaccaatttgcgggaatttggatcaaccgtaacctaaaacagacataaaattgtataaaatctcgcaaaataaacctataat 43358588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 37042571 - 37042643
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||| |||||||| ||||||| |||  ||||||||||| ||||||| ||||||||| |||||||||| ||||    
T  37042571 tttgcgggaatttgaatcaaccgaaatctaaaaccgatataaaattgtataaaatctcgcaaaatagatctat 37042643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41817605 - 41817514
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||| || || |||||| ||||||| | ||||| ||||| ||| ||||||    
T  41817605 ccactacaccactttgcagaaatttggatcaaccaaaatctaaaactgacactaaattgtataaaatatcgcaaagtagacatatgatcgtt 41817514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 6229071 - 6229109
Alignment:
Q  107 ccgggtgggccgtggcccaccccagcccatgaagggctc 145  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6229071 ccgggtgggctgtggcccaccccagcccatgaagggctc 6229109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 34276833 - 34276795
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggtagta 198  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34276833 tccggtatccgtgtccgtatccgtgcttcataggtagta 34276795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 15382453 - 15382420
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||||||||||||||||||||||||||||||    
T  15382453 tccggtgtccgtgtccgtatccgtgcttcatagg 15382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13013158 - 13013234
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| | |||||||||||||| | || ||||||||| | ||| ||| |||||||||  |||||||||||||||||    
T  13013158 atttgcggaaatttggatcaaccgatacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 13013234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 13287482 - 13287522
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgc-ttcataggtagtaa 199  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  13287482 tccggtgtccgtgtccgtatccgtgctttcataggtagtaa 13287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15374365 - 15374301
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaa 64  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||||| |||| || |||||    
T  15374365 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgatataaaactgtataaa 15374301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 10925754 - 10925687
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||| |||| ||||||||| | ||| ||| |||||||||  ||||||||| |||||||    
T  10925754 aatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagatctataat 10925687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 20071329 - 20071367
Alignment:
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgcc 149  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  20071329 gtgggccgtgacccaccctagcccatgaagggctccgcc 20071367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 8420014 - 8419985
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttca 189  Q
    ||||||||||||||||||||||||||||||    
T  8420014 tccggtgtccgtgtccgtatccgtgcttca 8419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 17177103 - 17177140
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  17177103 gtatctggtgtctgtgtccgtatccgtgcttcataggt 17177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 21522726 - 21522693
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||| ||||||||||||||||||||||||||    
T  21522726 tccggtgaccgtgtccgtatccgtgcttcatagg 21522693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 21533292 - 21533259
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||| ||||||||||||||||||||||||||    
T  21533292 tccggtgaccgtgtccgtatccgtgcttcatagg 21533259  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 22578958 - 22579031
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||||| || |||| ||||||||| ||||||||| | ||||||| | |||||| || ||| ||||||    
T  22578958 ggaatttggatcagccgaaacctaaaaccgacacaaaattgtacaaaatctcgtaaaataaacttatgatcgtt 22579031  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 32426935 - 32426968
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    |||||||||||||||||||||| |||||||||||    
T  32426935 tccggtgtccgtgtccgtatccatgcttcatagg 32426968  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 41084476 - 41084560
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||| || |||| |||| ||||||||| | |||| || ||||||||| | ||||||||||||||||    
T  41084476 actacaccactttgcgggaatttgaattaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 41084560  T

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Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 41995450 - 41995417
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcat 190  Q
    |||||| |||||||||||||||||||||||||||    
T  41995450 gtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

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Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 6401474 - 6401442
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||| |||||||||||||||||    
T  6401474 tccggtgtccgtgtctgtatccgtgcttcatag 6401442  T

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Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 6770517 - 6770485
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||| ||||||||||||||||||||||    
T  6770517 cggtgtccgtatccgtatccgtgcttcataggt 6770485  T

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Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13084546 - 13084622
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| | |||||||||||||  | || ||||||||| | ||| ||| |||||||||  |||||||||||||||||    
T  13084546 atttgcggaaatttggatcaactgatacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 13084622  T

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Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 20656977 - 20657017
Alignment:
Q  114 ggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
    |||| ||||||||||||||| ||||| ||||||||||||||    
T  20656977 ggccatggcccaccccagcctatgaaaggctccgccactgc 20657017  T

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Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 20683357 - 20683325
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||| ||||    
T  20683357 tccggtgtccgtgtccgtatccgtgctttatag 20683325  T

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Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 23016074 - 23016106
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||| |||||||||||||||||||||||||||    
T  23016074 tccggagtccgtgtccgtatccgtgcttcatag 23016106  T

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Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 43001790 - 43001762
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  43001790 gtgtccgtgtccgtatccgtgcttcatag 43001762  T

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Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17285299 - 17285452
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||          
T  17285299 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatataaaattgcataaaatctcgcaaattagacctataatcgttgatttttt 17285398  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  17285399 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 17285452  T

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Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16692954 - 16693108
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||          
T  16692954 ccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttgatttttt 16693053  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16693054 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 16693108  T

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Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33012062 - 33012212
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||          
T  33012062 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcgttgatttttt 33012161  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
           ||||||||||||||||||||||||||||||||||||||||||||    
T  33012162 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcca 33012212  T

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Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 29170092 - 29169940
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnn 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||            
T  29170092 actacaccactttgtaggaatttggatcaaccaaaacataaaatcgatacaaaattgcataaaatctcgcaaattagacctataatcgttgattttttaa 29169993  T
Q  102 nnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
         |||||||||| |||||||||||||||||||||||||||||||||||||    
T  29169992 tttttccgggtgggctgtggcccaccccagcccatgaagggctccgccactgc 29169940  T

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Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 919715 - 919868
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||          
T  919715 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgattttta 919814  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| |||||||||||||||||||||||||||||||||||| |||||    
T  919815 aatttttccggatgggccgtggcccaccccagcccatgaagggctccgtcactg 919868  T

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Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 6849905 - 6849752
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||          
T  6849905 ccactacaccactttgtagaaatttgaatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaaattagacctataatcgttgatttttt 6849806  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  6849805 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6849752  T

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Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8530235 - 8530082
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  8530235 ccactacaccactttgcaagaatttggatcaaccagaacataaaatcgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 8530136  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            ||||||||||||||||||||||||||||||||||||||||||||||    
T  8530135 aattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 8530082  T

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Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 44052465 - 44052615
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||||           
T  44052465 cactacaccactttgtaggaatttggatcaatcaaaacataaaaccaacacaaaattacataaaatctcgcaaaatagacctataatcgttgatttttaa 44052564  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
          ||||||| |||||||||||||||||||||||||||||||||||||    
T  44052565 atttttccgggtgagccgtggcccaccccagcccatgaagggctccgccac 44052615  T

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Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 29981712 - 29981865
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| |  |||| ||||||||||||||||||          
T  29981712 ccactacaccactttgcaggaatttggataaaccaaaacttaaaaccgacacaaaattgcataaaatatcacaaagtagacctataatcgttgatttttt 29981811  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| ||||||||||||||||||||||||||||||||||||||||||    
T  29981812 aatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 29981865  T

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Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 37125833 - 37125692
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||||||||||||||||||||||| |||||| ||  |||||||||||||||| | ||||||||||||||||||||||||             |||||    
T  37125833 tttgcaggaatttggatcaaccaaaacgtaaaactgacgcaaaattgcataaaatatcgcaaaatagacctataatcgttgattttataatttttccggg 37125734  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  37125733 tgggccgtggcccacctcagcccatgaagggctccgccactg 37125692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 42372122 - 42371969
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||          
T  42372122 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagacctataatcattgatttttt 42372023  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           | ||||||||||||||||||||||  |||||||||||||||||||||    
T  42372022 aatttttctgggtgggccgtggcccaccccaatccatgaagggctccgccactg 42371969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 48708422 - 48708577
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga-nnnnn 98  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||          
T  48708422 ccactacaccactttgcaggaatttggatcaacaaaaacataaaatcgatataaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 48708521  T
Q  99 nnnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
             ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  48708522 taattttttcggatgggccgtggctcaccccagcccatgaagggctccgccactgc 48708577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 40428788 - 40428879
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  40428788 actacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctatagtcgttga 40428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 24790587 - 24790434
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||| |||||||          
T  24790587 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaacagacttatagtcgttgatttttt 24790488  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           | ||||||| |||||||||| ||||||||||||||||||| ||||||    
T  24790487 tatttttctgggtgggtcgtggcccactccagcccatgaagggctccaccactg 24790434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 47561867 - 47561726
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||             |||||    
T  47561867 tttgcagtaatttggatcaaccaaaacataaaacctacacaaaattgcataaaatatcgcaaaatagacctataatcgttgatttttttatttttccggg 47561768  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||| | || |||||||||||||||||||    
T  47561767 tgggccgtggcccacccaaacctatgaagggctccgccactg 47561726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24544723 - 24544816
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  24544723 ccactacaccactttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcgttga 24544816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45836996 - 45836903
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  45836996 ccactacaccactttgcaggaatttagatcaaccaaaacataaaaccgatacaaaattgtataaaatctcgcaatatagacctataatcgttga 45836903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 51139838 - 51139745
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  51139838 ccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttga 51139745  T

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Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23177494 - 23177351
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||          
T  23177494 ccactacaccactttgcagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttta 23177395  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggc 143  Q
           |||||||| |||||||||||||||||||| |||||||    
T  23177394 aatttttccgggtggaccgtggcccaccccagcccacgaagggc 23177351  T

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Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25299093 - 25299181
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatc 88  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  25299093 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaagttgcataaaatctcgcaaaatagacctataatc 25299181  T

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Target: chr1; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46224765 - 46224856
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||    
T  46224765 ccactacaccactttgcaggaatttggatcaacaaaaacataaaatcgatacaaaattgcataaaatctcgcaaaatagatttataatcgtt 46224856  T

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Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9042424 - 9042576
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||| ||||||||||||  ||||          
T  9042424 ccactacaccactttgtaggaatttggatcaaccaaaacataaaatcgatac-aaattgcataaaatctcgtaaattagacctataattattgatttttt 9042522  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| |||||||||||||| |||||||||||||||||||||||||||    
T  9042523 aatttttccggatgggccgtggcccagcccagcccatgaagggctccgccactg 9042576  T

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Target: chr1; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8086382 - 8086289
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| |||||||||| ||||| |||||||    
T  8086382 ccactacaccactttgcaggaatttggatcaaccaaaacataaaacctacataaaattgcataaaatctagcaaaatagatctatagtcgttga 8086289  T

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Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44317719 - 44317626
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||| | | |||||||| |||||||||| ||||||||||||||||||||||||    
T  44317719 ccactacaccactttacaggaatttagatcaaccaaaacataaaatcaacacaaaattacataaaatctcgcaaaatagacctataatcgttga 44317626  T

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Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33011949 - 33012036
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  33011949 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgcataaaatctcgcaaaatagacctataat 33012036  T

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Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40567231 - 40567144
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  40567231 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 40567144  T

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Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 48708310 - 48708396
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  48708310 cactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 48708396  T

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Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 40567118 - 40567042
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaat 76  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||    
T  40567118 ccactacaccactttgcaggaatttggatcaactaaaacataaaaccaacacaaaattgcataaaatctcgcaaaat 40567042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8086495 - 8086408
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  8086495 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 8086408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42372235 - 42372148
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| | | ||||||| ||||||||| ||||||||||||||||||    
T  42372235 ccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 42372148  T

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Target: chr1; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 45837109 - 45837022
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||| ||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  45837109 ccactacaccaatttgcaggaatttgaatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 45837022  T

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Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24790701 - 24790613
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaacc-aaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| ||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  24790701 ccactacaccaatttgcgggaatttggatcaacccaaaacgtaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 24790613  T

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Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 29981610 - 29981686
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  29981610 atttgcgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 29981686  T

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Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16692841 - 16692928
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  16692841 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 16692928  T

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Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37125958 - 37125871
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||| |||||||| |||| |||||| |||| ||||||| ||||||||| ||||||||||||||||||    
T  37125958 ccactacaccaatttgcgggaattttgatcaaccgaaacctaaaactgatataaaattgtataaaatctcgcaaaatagacctataat 37125871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40428673 - 40428760
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||| |||||||    
T  40428673 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagaactataat 40428760  T

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Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 47561992 - 47561905
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| | ||||||||||||||||||    
T  47561992 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcgcaaaatagacctataat 47561905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 25298991 - 25299067
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||  ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  25298991 atttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 25299067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23177607 - 23177520
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||  ||||||||| | ||||||| ||||||||| ||||||||||| ||||||    
T  23177607 ccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 23177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24542672 - 24542759
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24542672 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24542786 - 24542873
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24542786 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24542900 - 24542987
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24542900 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543014 - 24543101
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543014 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543128 - 24543215
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543128 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543242 - 24543329
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543242 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543356 - 24543443
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543356 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543470 - 24543557
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543470 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543584 - 24543671
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543584 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543698 - 24543785
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543698 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543812 - 24543899
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543812 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24543899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24543926 - 24544013
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24543926 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544013  T

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Target: chr1; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24544040 - 24544127
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24544040 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24544154 - 24544241
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24544154 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24544268 - 24544355
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24544268 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24544382 - 24544469
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24544382 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24544496 - 24544583
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24544496 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24544610 - 24544697
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||| |  |||||||||||||||||    
T  24544610 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatttcacaaaatagacctataat 24544697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46224652 - 46224739
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||  ||||||||| | ||||||| ||||||||| |||||||||| |||||||    
T  46224652 ccactacaccaatttgcgggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 46224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 51139951 - 51139864
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| | ||||||| |||||||| |||||||||    
T  51139951 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtaaaaaatctcgcaaaataaacctataat 51139864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 919604 - 919689
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| ||||||||||||||   |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  919604 actacaccaatttgctggaatttggatcaatggaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 919689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 9246925 - 9246994
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatc 88  Q
    |||||||||| | || |||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  9246925 gaatttggataagccgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatagatctataatc 9246994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 6850007 - 6849931
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||| |||||||||||||| |||| ||||||||||| ||| ||| |||||||||  ||||||||| |||||||    
T  6850007 atttgcagaaatttggatcaaccgaaacctaaaaccgatataaatttgtataaaatctcacaaaatagatctataat 6849931  T

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Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17285186 - 17285273
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||||||||||| |||| |||||||||   ||||||| |||||||||  |||||||||||||||||    
T  17285186 ccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 17285273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44052351 - 44052438
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||  |||||||||  |||||||||||||||||    
T  44052351 ccactacaccaatttgcgagaatttgaatcaaccaaaacctaaaaccgacataaaattctataaaatctcacaaaatagacctataat 44052438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 32540620 - 32540690
Alignment:
Q  21 atttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    |||||||| |||| |||| ||||||||| ||||||||| ||||||||| | |||||||||||||| |||||    
T  32540620 atttggataaaccgaaacctaaaaccgacacaaaattgtataaaatctcgtaaaatagacctatagtcgtt 32540690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 17879973 - 17880021
Alignment:
Q  107 ccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  17879973 ccgggtgggccgtgacccaccccagcccatgaagggctctgcccctgcc 17880021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 29170196 - 29170120
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| | |||||||||||||| |||| ||||||||| | ||| ||| |||||||||  |||||||||||||||||    
T  29170196 atttgcggaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 29170120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 37343067 - 37343027
Alignment:
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  37343067 gtgggccgtggccgaccccagcccatgaagggctccgccac 37343027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 46224874 - 46224918
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgccact 152  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  46224874 cgggtggaccgtggcccaccccaacccatgaagggctccgccact 46224918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9042311 - 9042398
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||||||||||| |||| |||||||||   ||| ||| |||||||||  |||||||||||||||||    
T  9042311 ccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacttaaatttgtataaaatctcacaaaatagacctataat 9042398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 48548045 - 48548080
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggta 195  Q
    ||||||||||||||||||||||||||||||||||||    
T  48548045 tccggtgtccgtgtccgtatccgtgcttcataggta 48548080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 45836887 - 45836854
Alignment:
Q  120 ggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||    
T  45836887 ggcccaccccagcccatgaagggctccgccactg 45836854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 10577818 - 10577850
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  10577818 tccggtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 25934604 - 25934572
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  25934604 tccggtgtccgtgtccgtatccgtgcttcatag 25934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 38078739 - 38078771
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  38078739 tccggtgtccgtgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 43532470 - 43532514
Alignment:
Q  107 ccgggtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||    
T  43532470 ccggatgggccgtggcccaccccaacccatggagggctccgccac 43532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 24334778 - 24334812
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||| ||||||||||||    
T  24334778 tccggtgtccgtgtccgtatccatgcttcataggt 24334812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 398848 - 398881
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    ||||||||||| ||||||||||||||||||||||    
T  398848 tccggtgtccgcgtccgtatccgtgcttcatagg 398881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 9247013 - 9247058
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||  |||||||||| |||||||||||||||||| ||||||    
T  9247013 cgggtgggttgtggcccacctcagcccatgaagggctccaccactg 9247058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 17831605 - 17831642
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  17831605 gtatccggtgtctgtgtctgtatccgtgcttcataggt 17831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37343139 - 37343082
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaatt 57  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||    
T  37343139 ccactacaccaatttgcgggaatttggatcaaccgaaacttaaaaccgacataaaatt 37343082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 35919358 - 35919394
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcataggtagtaat 200  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  35919358 gtgtcagtgtccgtatctgtgcttcataggtagtaat 35919394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 51410009 - 51409981
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  51410009 gtgtccgtgtccgtatccgtgcttcatag 51409981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 65086 - 64933
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||           
T  65086 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataagcgttgttttttt 64987  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  64986 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 64933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 65313 - 65226
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||| ||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  65313 ccactacaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 65226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 65199 - 65112
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||| ||||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  65199 ccactacaccaatttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 65112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 4e-44; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 26873855 - 26873702
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||          
T  26873855 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcattgatttttt 26873756  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  26873755 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 43859243 - 43859089
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||          
T  43859243 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattcgacctataatcgttgatttttt 43859144  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           || ||||||||||||||||||| |||||||||||||||||||||||||    
T  43859143 aatttttccaggtgggccgtggcccaccctagcccatgaagggctccgccactgc 43859089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17167018 - 17166869
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||          
T  17167018 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagaactataattgttgatttttt 17166919  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcc 149  Q
           | |||||||||||||||||||||||||||||||||||||||||    
T  17166918 aatttttctgggtgggccgtggcccaccccagcccatgaagggctccgcc 17166869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 36358316 - 36358469
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||          
T  36358316 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatgtcgcaaaatagatctataatcgttgatttttt 36358415  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           || ||||| ||||||||||||||||||||||||||||||||||||||    
T  36358416 aatttttccaggtggaccgtggcccaccccagcccatgaagggctccgccactg 36358469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 46027832 - 46027679
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  46027832 ccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 46027733  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||| |||||||||||||||||||| |||||||||||||||||    
T  46027732 aatttttccgggtggaccgtggcccaccccagcccacgaagggctccgccactg 46027679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 44468027 - 44468177
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||          
T  44468027 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagatctataatcgttgatttttt 44468126  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
           || |||||||||||||||||||||||| ||||||||||||||||    
T  44468127 aatttttccaggtgggccgtggcccaccccagcctatgaagggctccgcca 44468177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31428889 - 31428796
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31428889 ccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttga 31428796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 45350191 - 45350051
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||             |||||    
T  45350191 tttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacttataatcgttgattttttaatttttccggg 45350092  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||| |||||||||| |||||||||||||||||||||||||||    
T  45350091 tggaccgtggccca-cccagcccatgaagggctccgccactg 45350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22723782 - 22723875
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  22723782 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaagtagacctataatcgttga 22723875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16834283 - 16834438
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| |||||||||||||||          
T  16834283 ccactacaccactttgcagaaatttggatcaaccaaaacataaaactgacacaaaattgcataaaattttacaaaataaacctataatcgttgatttttt 16834382  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
           |||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  16834383 tatttttccggatgggccatggcccaccccagcccatgaagggctccgccagtgcc 16834438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 44724072 - 44724223
Alignment:
Q  4 ctacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnn 102  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||  ||||||| ||||||||| ||||              
T  44724072 ctacaccactttgcaggaatttagatcaaccaaaacataaaaccgacacaaaattgtataaaatctctcaaaataaacctataatagttggttttttaat 44724171  T
Q  103 nnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44724172 ttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 44724223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 36675505 - 36675646
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||| || |              |||     
T  36675505 tttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaaatagatctataatcattaattttttaattttttcgga 36675604  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36675605 tgggccgtggcccaccccagcccatgaagggctccgccactg 36675646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31065629 - 31065722
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  31065629 ccactacaccactttgcaggaatttggattaaccaaaacataaaaccgacacaaaattgcataaaatctcgtaaaatagacctataatcgttga 31065722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 39976472 - 39976380
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  39976472 cactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacatataatcgttga 39976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29075191 - 29075284
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| |||||||    
T  29075191 ccactacaccactttgcaagaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatatcgcaaaatagacctatagtcgttga 29075284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 42241936 - 42242028
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || |||||||||||||||    
T  42241936 cactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcacaaattaaacctataatcgttga 42242028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 9624136 - 9624055
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  9624136 tttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 9624055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18104325 - 18104417
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  18104325 ccactacaccaatttgcgggaatttggatcaaccaaaacatgaaaccgacacaaaattgcat-aaatctcgcaaaatagacctataatcgttga 18104417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44142914 - 44142821
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||||||    
T  44142914 ccactacaccactttgcaggaatttggatcaaagaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatatacctataatcgttga 44142821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 23469404 - 23469483
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacc 81  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  23469404 actacaccactttgcaggaatttggatcaaccaaaatataaaaccgacacaaaattgcataaaatctcgcaaaatagacc 23469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41367811 - 41367724
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||| || |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  41367811 ccactacaccactttgtagaaatttggatcaaccaaaatataaaatcgatacaaaattgcataaaatctcgcaaattagacctataat 41367724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31931917 - 31932010
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||| | ||||||||| ||||||||||||||||||||||||    
T  31931917 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaatcgtataaaatctcgcaaaatagacctataatcgttga 31932010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9624261 - 9624174
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| | ||||||||||||||||    
T  9624261 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcggaaaatagacctataat 9624174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8461851 - 8461698
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| |||||||||||||||| |||| |||||| || | ||||||| ||||||| | |||||||||||||||||||||| |          
T  8461851 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaacagacataaaattgtataaaatatcgcaaaatagacctataatcgttaatttttt 8461752  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           || |||||| |||| |||||||||||||||||||||||| |||||||    
T  8461751 aatttttccaggtgggtcgtgacccaccccagcccatgaagggctctgccactg 8461698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 40055724 - 40055666
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaata 77  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  40055724 gaatttggatcaaccaaaacatacaaccgatacaaaattgcataaaatctcgcaaaata 40055666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 31065527 - 31065603
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  31065527 atttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 31065603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36675380 - 36675467
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||  |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  36675380 ccactacaccaatttgtgggaatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44143026 - 44142939
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||| |||||  ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  44143026 ccactacaccaatttgcgggaatttggatcaatcaaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44142939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44723956 - 44724043
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||  |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  44723956 ccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17167121 - 17167045
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||| ||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  17167121 atttgcgggaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 17167045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 23562656 - 23562806
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnn 101  Q
    ||||||||| ||||| | |||||||||||| |||||| |||  | || ||||||||| ||||||||| |||||||||| |||||||||||||            
T  23562656 actacaccactttgcggaaatttggatcaatcaaaacttaattc-gacacaaaattgtataaaatctcgcaaaatagatctataatcgttgattttttaa 23562754  T
Q  102 nnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
         || |||||||| |||||||||||||| ||||||||||||||||||||    
T  23562755 tttttccaggtgggccatggcccaccccagctcatgaagggctccgccactg 23562806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 29502138 - 29502293
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| ||||||||||||   | |||| ||||||| | ||||||||| |||||||||||||||||| |||||| |||||| |          
T  29502138 ccactacaccactttgcgggaatttggatctgtcgaaacctaaaaccaacacaaaattgaataaaatcttgcaaaatatacctattatcgttaatttttt 29502237  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
            ||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  29502238 aaatttttcgggtgggctgtggcccaccctagcccatgaagggctccgccgctgcc 29502293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 40055845 - 40055769
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| |||||| || | ||||||| ||||||||| ||||||||||||||||||    
T  40055845 atttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 40055769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22499784 - 22499875
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||| ||||||| ||| |||| |||| ||||||||||| ||||||| ||||||| | ||||||||||||||| ||||||    
T  22499784 ccactacaccactttgcgggaatttagattaaccgaaacctaaaaccgatataaaattgaataaaatttcgcaaaatagacctatgatcgtt 22499875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22723669 - 22723756
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||| ||||||||||| |||  ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  22723669 ccactacaccaatttgcgggaaattggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 22723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23469289 - 23469376
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||| ||||||||  |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  23469289 ccactacaccaatttgcgggaattgggatcaacagaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 23469376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 29075098 - 29075165
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  29075098 aatttggatcaaccgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 29075165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36358203 - 36358290
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| |||||||||| |||||||    
T  36358203 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 36358290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43859356 - 43859269
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||||| |||||||||||||| |||| |||||||||   ||||||| |||||||||  |||||||||||||||||    
T  43859356 ccactacaccaatttgcagaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 43859269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 46027945 - 46027858
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||  |||||| || | ||||||| ||||||||| ||||||||||||||||||    
T  46027945 ccactacaccaatttgcgggaatttggatcaacctaaatctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 46027858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 45350315 - 45350229
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||| ||||| |||||||| ||||||| |||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  45350315 cactacaccaatttgcgggaatttgaatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 45350229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 46828842 - 46828926
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||| ||||| | ||||||| | ||||||| |||||||||||||||    
T  46828842 ccactacaccactttgcgggaatttggatcaaccgaaacctaataccgacataaaattgtacaaaatctcgcaaaatagacctat 46828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44467914 - 44468001
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||   |||| ||||||| | | ||||||| ||||||||| ||||||||||||||||||    
T  44467914 ccactacaccaatttgcgggaatttggatcaattgaaacctaaaaccaacataaaattgtataaaatctcgcaaaatagacctataat 44468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 22566606 - 22566667
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacc 81  Q
    ||||||||||| || |||| ||||||||| ||||||||| ||||||||| ||||||||||||    
T  22566606 aatttggatcagccgaaacttaaaaccgacacaaaattgtataaaatctcgcaaaatagacc 22566667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 29662977 - 29662932
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  29662977 cgggtgggccgtagcccaccctagcccatgaagggctccgccactg 29662932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 41367923 - 41367838
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataa 86  Q
    |||||||||| ||||| | ||||||||||||| ||||| ||||||||| | ||| ||| |||||||||  ||||||||||||||||    
T  41367923 cactacaccaatttgcggaaatttggatcaactaaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataa 41367838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 19692510 - 19692467
Alignment:
Q  110 ggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  19692510 ggtggaccgtggtccaccccagcccatgaagggctccgccactg 19692467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 28754856 - 28754810
Alignment:
Q  110 ggtgggccgtggcccaccccagcccatgaagggctccgccactgccg 156  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||    
T  28754856 ggtgggccatggcccaccctagcccatgaaaggctccgccactgccg 28754810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 6961164 - 6961111
Alignment:
Q  35 aaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatc 88  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| || |||||||    
T  6961164 aaacctaaaaccgacacaaaattgtataaaatcttgcaaaataaacatataatc 6961111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 8727766 - 8727725
Alignment:
Q  108 cgggtgggccgtggcccaccccagcccatgaagggctccgcc 149  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  8727766 cgggtgggtcgtggcccaccctagcccatgaagggctccgcc 8727725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 9014427 - 9014390
Alignment:
Q  117 cgtggcccaccccagcccatgaagggctccgccactgc 154  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9014427 cgtggcccaccacagcccatgaagggctccgccactgc 9014390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 42241840 - 42241909
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||||| |||  ||||||||| | ||||||| ||||||||| | |||||||| |||||||    
T  42241840 ggaatttggatcaaccgaaatctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 42241909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 9778484 - 9778452
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  9778484 tccggtgtccgtgtccgtatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 16649605 - 16649685
Alignment:
Q  4 ctacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagaccta 83  Q
    |||||||| ||||| ||||||||||||| || |||| ||||| | ||||||||||| ||||||| | |||||||| |||||    
T  16649605 ctacaccactttgcgggaatttggatcagccgaaacctaaaatcaatacaaaattgtataaaatttcgcaaaataaaccta 16649685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 17623966 - 17624046
Alignment:
Q  4 ctacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagaccta 83  Q
    |||||||| ||||| ||||||||||||| || |||| ||||| | ||||||||||| ||||||| | |||||||| |||||    
T  17623966 ctacaccactttgcgggaatttggatcagccgaaacctaaaatcaatacaaaattgtataaaatttcgcaaaataaaccta 17624046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26873968 - 26873881
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||| | |||  |||||| || | ||||||| |||||| || ||||| ||||||||||||    
T  26873968 ccactacaccaatttgcgggaatttggatcaatcgaaatctaaaactgacataaaattgtataaaacctcgcaaattagacctataat 26873881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 27949726 - 27949680
Alignment:
Q  109 gggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
    ||||||||||||||||||||  ||||||||  |||||||||||||||    
T  27949726 gggtgggccgtggcccaccctggcccatgagtggctccgccactgcc 27949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 40054336 - 40054298
Alignment:
Q  115 gccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  40054336 gccgtggcccaccccagcccatggagggttccgccactg 40054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 8727855 - 8727794
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagac 80  Q
    |||||||||||| || |||||||||| | | |||||||  |||||||||||| |||||||||    
T  8727855 gaatttggatcagccgaaacataaaatcaacacaaaatgacataaaatcttgtaaaatagac 8727794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 9013847 - 9013814
Alignment:
Q  121 gcccaccccagcccatgaagggctccgccactgc 154  Q
    ||||||||||||||||||||||||||||| ||||    
T  9013847 gcccaccccagcccatgaagggctccgccgctgc 9013814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 9408421 - 9408458
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  9408421 gtattcggtgtccgtgtccgtatccgtgtttcataggt 9408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 11061156 - 11061189
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcat 190  Q
    ||||||| ||||||||||||||||||||||||||    
T  11061156 gtatccgatgtccgtgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 1433428 - 1433396
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||||||||| |||||||||||||||||||||    
T  1433428 cggtgtccgtgcccgtatccgtgcttcataggt 1433396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 17851407 - 17851375
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||| |||||||||||||||||    
T  17851407 tccggtgtccgtgtctgtatccgtgcttcatag 17851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 21141067 - 21141095
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcat 190  Q
    |||||||||||||||||||||||||||||    
T  21141067 cggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 25174280 - 25174216
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagaccta 83  Q
    ||||||||||||||| |||| ||||||| | ||| ||||  ||||||||| ||||||| ||||||    
T  25174280 gaatttggatcaaccgaaacctaaaaccaacacataattatataaaatctcgcaaaattgaccta 25174216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 2660844 - 2660997
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          
T  2660844 ccactacaccactttgcaggaatttggatcatccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 2660943  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  2660944 aatttttccgggtgggtcgtggcccatcccagcccatgaagggctccgccactg 2660997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9079061 - 9079214
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||          
T  9079061 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaattagacctataatcgttgatttttt 9079160  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| ||||| |||||||||||||| |||||||||||||||||||||    
T  9079161 aatttttccggatgggctgtggcccaccccagtccatgaagggctccgccactg 9079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 24635476 - 24635629
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||          
T  24635476 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaaattagacctataatcgttgatttttt 24635575  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  24635576 aatttttccggatgggccgtggcccaccccagcccatgaagggcttcgccactg 24635629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12698647 - 12698493
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga-nnnnn 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||||          
T  12698647 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataattgttgatttttt 12698548  T
Q  99 nnnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            |||||| ||||||||||||||||||||||||||||||||||||||||    
T  12698547 aaatttttccgggtcggccgtggcccaccccagcccatgaagggctccgccactg 12698493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15469242 - 15469149
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15469242 ccactacaccactttgcaggaatttggatcaatcaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttga 15469149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 11450510 - 11450668
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||  ||||||||||||          
T  11450510 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataagatctcgcaaaatagatatataatcgttgatattta 11450609  T
Q  100 nnnnnnnccgggtgggccgtggcccac----cccagcccatgaagggctccgccactgc 154  Q
           ||||||||||||||||||||    ||||||||||||||||||||||||||||    
T  11450610 aatttttccgggtgggccgtggcccaccccacccagcccatgaagggctccgccactgc 11450668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24130250 - 24130396
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||     ||||||||||||          
T  24130250 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaat-----tataatcgttgatttttt 24130344  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
           |||||||||| ||||||||||||||||||||||||||||||||||    
T  24130345 aatttttccgggtgggcagtggcccaccccagcccatgaagggctccgccac 24130396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8560578 - 8560426
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||          
T  8560578 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccaatacaaaattgcataaaatctcgcaatttagacctataatcgttgatttttt 8560479  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            |||||||||||||| |||||||| ||| ||||||||||||||||||    
T  8560478 aattttttcgggtgggccgtgg-ccaccccaacccttgaagggctccgccactg 8560426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 16461427 - 16461568
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||             |||||    
T  16461427 tttgaaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaataggcttataatcgttgattttttaatatttccggg 16461526  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||| |||||||||| ||||||||| |||||||||||    
T  16461527 tgggccgtgacccaccccagtccatgaaggactccgccactg 16461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 7021958 - 7021882
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatc 88  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  7021958 tttgcaggaatttggatcaaccaaaacataaaactgacacaaaattgcataaaatctcgcaaaatagacctataatc 7021882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 34127638 - 34127557
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||    
T  34127638 tttgcaggaatttggatcaaccaaatcataaaaccgatacaaaattgtataaaatctcgcaaaatagacttataatagttga 34127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 26468601 - 26468447
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||||||||||||||||| ||||  |||||||||| ||||||||| ||||||||| |||||||||||||||||| |||||          
T  26468601 ccactacaccactttgcaggaatttggatcaagcaaattataaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatagttgatttttt 26468502  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           ||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  26468501 aatttttccaagtggaccgtggcccatcccagcccatgaaaggctccgccactgc 26468447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34127763 - 34127676
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  34127763 ccactacaccaatttgcaggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatcttgcaaaatagacctataat 34127676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 34023549 - 34023641
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||  ||||||||| | ||||||||||||||||||||||    
T  34023549 cactacaccactttgcagaaatttagatcaaccaaaacataaaaccgacacaaaattatataaaatctcgtaaaatagacctataatcgttga 34023641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 13405387 - 13405518
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtgggcc 117  Q
    |||||||||||||| | |||| ||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |              |||||||| |    
T  13405387 ggaatttggatcaatcgaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacctataatcgttaattttttaattttttcgggtgggtc 13405486  T
Q  118 gtggcccaccccagcccatgaagggctccgcc 149  Q
    ||||||||||||| ||||||||||||||||||    
T  13405487 gtggcccaccccaacccatgaagggctccgcc 13405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 23259086 - 23259167
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||  | |||||||||| |||||    
T  23259086 tttgcagaaatttgaatcaaccaaaacataaaaccgatagaaaattgcataaaatctcgcaagttggacctataattgttga 23259167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2660731 - 2660818
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  2660731 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 2660818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7022083 - 7021996
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||  |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  7022083 ccactacaccaatttgtgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 7021996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26468714 - 26468627
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| |||||| || | ||||||| ||||||||| ||||||||||||||||||    
T  26468714 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaactgacataaaattgtataaaatctcgcaaaatagacctataat 26468627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11450397 - 11450484
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| | |||||||||| |||||    
T  11450397 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagaccaataat 11450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12996551 - 12996464
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||| |||| |||| ||||||||| | ||||||| ||||||||| |||||||||| |||||||    
T  12996551 ccactacaccactttgcgggaatttggattaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 12996464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23258847 - 23258934
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||   ||||||| |||||||||  |||||||||||||||||    
T  23258847 ccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 23258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23258961 - 23259048
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||||| ||||||||||||||||||  |||||||||   ||||||| |||||||||  |||||||||||||||||    
T  23258961 ccactacaccaatttgcagaaatttggatcaaccaaaagctaaaaccgacgtaaaattgtataaaatctcacaaaatagacctataat 23259048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14883167 - 14883261
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatac-aaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| || ||||||| ||||||||| || |||||||| ||||||||||||    
T  14883167 ccactacaccactttgcgggaatttggatcaaccgaaacctaaaatcgacaccaaaattgtataaaatctcgcgaaatagacttataatcgttga 14883261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 34023436 - 34023522
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| | |||||||| |||||||    
T  34023436 cactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgtaaaatagatctataat 34023522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15469354 - 15469268
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||| |||| |||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  15469354 ccactacaccaatttgcgggaattgggat-aaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 15469268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24635363 - 24635450
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||||||||||| |||| ||||||||||  ||| ||| |||||||||  |||||||||||||||||    
T  24635363 ccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgatttaaatttgtataaaatctcacaaaatagacctataat 24635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 12996435 - 12996282
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||  |||||||| ||||| | |||| ||||||||||||||||||| ||||||||| |||||||| | |||| ||| ||||           
T  12996435 cactacaccactttgagggaatttgcatcaatcgaaacctaaaaccgatacaaaattgtataaaatctcgcaaaatatatctattatcattga-tttttt 12996337  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
          ||| || ||| ||||||||||||| ||||||||||||||||||||||||    
T  12996336 aattttccgagtaggctgtggcccaccccaacccatgaagggctccgccactgcc 12996282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 10290501 - 10290456
Alignment:
Q  109 gggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  10290501 gggtgggccatggcccaccctagcccatgaagggctccgccactgc 10290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12698759 - 12698678
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacc 81  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| |||||||||  |||||||||||    
T  12698759 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaagcgacataaaattgtataaaatctcacaaaatagacc 12698678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8560691 - 8560604
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||||||||||| |||| |||||||||   ||||||| |||||||||  ||||||||| |||||||    
T  8560691 ccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacgtaaaattgtataaaatctcacaaaatagatctataat 8560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24130137 - 24130224
Alignment:
Q  1 ccactacaccatt-tgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| | ||| |||||||||||||||| |||| ||||||||  | ||||| | |||||| || ||||||||||||||||||    
T  24130137 ccactacaccaatatgcgggaatttggatcaaccgaaacctaaaaccggcataaaatcgtataaaaactcgcaaaatagacctataat 24130224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 7938092 - 7938058
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||||||||||||||||    
T  7938092 tccggtgtccgtgtccgtatccgtgcttcataggt 7938058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 18367813 - 18367781
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||||||    
T  18367813 tccggtgtccgtgtccgtatccgtgcttcatag 18367781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 2399421 - 2399460
Alignment:
Q  110 ggtgggccgtggcccaccccagcccatgaagggctccgcc 149  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  2399421 ggtgggctgtggcccaccccaacccatgaagggctccgcc 2399460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 5970185 - 5970219
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||||||||||||||||||| |||||||||||||    
T  5970185 tccggtgtccgtgtccgtatctgtgcttcataggt 5970219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 9107453 - 9107487
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||||||||||||| |||||||||||||||||||    
T  9107453 tccggtgtccgtgtcagtatccgtgcttcataggt 9107487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 31489955 - 31489894
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagac 80  Q
    |||||||||| ||| ||||| ||||| ||||||||||||  |||||||||  ||||||||||    
T  31489955 gaatttggattaactaaaacttaaaatcgatacaaaattatataaaatctcacaaaatagac 31489894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 7536590 - 7536518
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    |||||| ||||| || |||| |||||  || ||||||||| |||||||| | ||||||||| |||||||||||    
T  7536590 gaatttagatcagccgaaacctaaaattgacacaaaattgtataaaatcctacaaaatagatctataatcgtt 7536518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 8777056 - 8777088
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||| ||||||||||||||||||||||||||||    
T  8777056 tccgttgtccgtgtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10290610 - 10290519
Alignment:
Q  1 ccactacaccattt-gcaggaatttggatcaac-caaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    |||||||||||||| |||| |||||||||||||   |||| ||| ||||| || |||||| ||||||||| ||||| ||||||||| ||||||    
T  10290610 ccactacaccattttgcagaaatttggatcaacttgaaacctaacaccgacac-aaattgtataaaatctcgcaaagtagacctatgatcgtt 10290519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 10294083 - 10294051
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||| ||||||||||||||||||||||||    
T  10294083 tccggtgttcgtgtccgtatccgtgcttcatag 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 15469133 - 15469101
Alignment:
Q  120 ggcccaccccagcccatgaagggctccgccact 152  Q
    ||||| |||||||||||||||||||||||||||    
T  15469133 ggccctccccagcccatgaagggctccgccact 15469101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16461301 - 16461389
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaacc-gatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||| ||||||  |||| ||||||| || | ||||||  ||||||||| ||||||||||| ||||||    
T  16461301 ccactacaccaatttgcgggaatttgaatcaactgaaacctaaaacccgacataaaattatataaaatctcgcaaaatagacatataat 16461389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 34225888 - 34225916
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  34225888 gtgtccgtgtccgtatccgtgcttcatag 34225916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 34290158 - 34290194
Alignment:
Q  158 tatccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  34290158 tatccggtgtctgtgtccgtatctgtgcttcataggt 34290194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 11650972 - 11651125
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||          
T  11650972 ccactacaccactttgcatgaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 11651071  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||| |||||||||||||||||||||||||||||||||||||||||    
T  11651072 aatttttccgggcgggccgtggcccaccccagcccatgaagggctccgccactg 11651125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 2654917 - 2655067
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||           
T  2654917 cactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaactagatctataatcgttgatttttta 2655016  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccac 151  Q
           ||||||||||||||||||||||||||||||||||||||||||||    
T  2655017 attttttcgggtgggccgtggcccaccccagcccatgaagggctccgccac 2655067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 6755981 - 6755828
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||||          
T  6755981 ccactacaccactttgcaggaatttggatcaacaaaaacataaaaacaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 6755882  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  6755881 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6755828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 13233382 - 13233229
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||          
T  13233382 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatatcgcaaaatagatctataatcgttgatttttt 13233283  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  13233282 aatttttccgggtgggccgtggcccaccccagcctatgaaggactccgccactg 13233229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 40228448 - 40228592
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga-nnnnnnnnnnnnnccgg 110  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||              ||||    
T  40228448 tttgcaggaatttggatcaaccaaagcataaaaccgacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaaatttttccgg 40228547  T
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40228548 gtgggccgtggcccaccccagcccatgaagggctccgccactgcc 40228592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 18491338 - 18491184
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||  |||||||||||||||||||||||           
T  18491338 cactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacataaaattacataaaatctcacaaaatagacctataatcgttgatttttta 18491239  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
          ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18491238 atttttccgagtgggccgtggcccaccccagcccatgaagggctccgccactgcc 18491184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 44134644 - 44134493
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnn 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||           
T  44134644 cactacaccactttgcaggaatttggatcaaccaaaacataaaaccaata-aaaattgcataaaatctcacaaaatagacctataatcgttgatttttta 44134546  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
          |||||||| ||||||||||||||||||||||||||||||||||||||    
T  44134545 atttttccgggtggaccgtggcccaccccagcccatgaagggctccgccactg 44134493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 44745608 - 44745748
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||             | ||     
T  44745608 tttgcaggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatcttgcaaaatagacctataatcgttgattttttaatttttctgga 44745707  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccact 152  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  44745708 tgggccgtggcccaccccagcccattaaaggctccgccact 44745748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 16925258 - 16925106
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||          
T  16925258 ccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaagtctcgcaaattagacctataatcgttgatttttt 16925159  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||| |||||||||||||| |||||||||||||||||||||||    
T  16925158 aatttttccgggtggaccgtggcccacccc-gcccatgaagggctccgccactg 16925106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 19653666 - 19653803
Alignment:
Q  16 caggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtggg 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||             | | |||||    
T  19653666 caggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctaacaaaatagacctataatcgttgatttttttatttttcggtgtggg 19653765  T
Q  116 ccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19653766 ccgtggcccaccccagcccatgaagggctccgccactg 19653803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 44817567 - 44817708
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | | |||||||||||||| |||||||             |||||    
T  44817567 tttgcagaaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatttcgaaaaatagacctatagtcgttgattttttaatttttccggg 44817666  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44817667 tgggccgtggcccaccccagcccatgaagggctccgccactg 44817708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 38141563 - 38141719
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga-nnnnn 98  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||          
T  38141563 ccactacaccactttgcaggaatttggatcaacaaaaacataaaattgatacaaaattgcataaaatctcgcaaaatagacctataatcgttgatttttt 38141662  T
Q  99 nnnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgcc 155  Q
            |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38141663 taatttttccgggtgggccgtggccctccccagcccatgaagggctccgccagtgcc 38141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 31581772 - 31581909
Alignment:
Q  16 caggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccgggtggg 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||              | ||||||     
T  31581772 caggaatttggatcaaccaaaacataaaaccgacacaaaattgcataaaatctagcaaaatagacctataatcgttgtttttttaatttttcggggtgga 31581871  T
Q  116 ccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  31581872 ccgtggcccaccccagcccatgaagggcttcgccactg 31581909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36584575 - 36584422
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||| |||||||||  ||||          
T  36584575 ccactacaccactttgcaggaatttggatcaaccaaaacataaaactaacacaaaattgcataaaatctcgcaaaatatacctataattattga-ttttt 36584477  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 154  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36584476 tatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgc 36584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41832528 - 41832437
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  41832528 ccactacaccactttgcaggaatttggatcaaccaaaacataaaaccgacataaaattgcataaaatcttgcaaaatagacatataatcgtt 41832437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36955016 - 36955109
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  36955016 ccactacaccactttgcaagaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttga 36955109  T

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Target: chr4; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 43564558 - 43564417
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||             ||||     
T  43564558 tttgcaggaatttggatcaaccaaaacataaaaccaacacaaaattgcataaaatatcgcaaaatagacctataatcgttgattttttaatttttccgga 43564459  T
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||| | |||||||||||||||| |||||| ||||||||||||    
T  43564458 tggactgtggcccaccccagccaatgaagagctccgccactg 43564417  T

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Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12700574 - 12700667
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  12700574 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaagtctcgcaaaataaacctataatcgttga 12700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 13613110 - 13613241
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnnnnnnnnnccggg 111  Q
    |||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||             |||||    
T  13613110 tttgtaggaatttggatcaaccaaaatataaaaccaacacaaaattgcataaaatctcgcaaaatagacctataatcgttgattttttaatttttccggg 13613209  T
Q  112 tgggccgtggcccaccccagcccatgaagggct 144  Q
    |||||||||||||| ||||||||||||||||||    
T  13613210 tgggccgtggccca-cccagcccatgaagggct 13613241  T

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Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 31664173 - 31664322
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||    |||||||||| ||||          
T  31664173 ccactacaccactttgcaggaatttggatcaaccaaatcataaaaccgactcaaaattgcataaaatctcgcaaa----acctataatcattgatttttt 31664268  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||| ||||||||||||||||||||||    
T  31664269 aatttttccgggtgggccgtggcccaccccatcccatgaagggctccgccactg 31664322  T

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Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45670112 - 45670019
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||||||||||    
T  45670112 ccactacaccactttgtaggaatttggatcaaccaaaacataaaaccgacacaaaattacataaaatctcgcaaaataaacctataatcgttga 45670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 52581606 - 52581455
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga-nnnnnnn 100  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||| | |||||||| ||||||||||||||||||||||||||            
T  52581606 actacaccactttgcaggaatttggatcaactaaaacatgaaaccgacacaaaactccataaaatattgcaaaatagacctataatcgttgatttttttt 52581507  T
Q  101 nnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
          |||| |||||||||||||| |||||||||||||||||||||||||||    
T  52581506 atttttccggatgggccgtggccca-cccagcccatgaagggctccgccactg 52581455  T

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Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 54795735 - 54795828
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| |||||||||||||| |||||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  54795735 ccactacaccactttgcgggaatttggatcaatcaaaatctaaaaccgacacaaaattgtataaaatcttgcaaaatagacctataatcgttga 54795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 27270505 - 27270353
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||| | ||||||| |||||| |||||| ||||||||| ||||||||| ||||||||| ||||||||||| ||||||| ||||          
T  27270505 ccactacaccactttacgggaattttgatcaatcaaaacctaaaaccgacacaaaattgtataaaatctcgcaaaatagacttataatcattga-ttttt 27270407  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||| ||||||||||||||||||||||||||||||||||||    
T  27270406 taattttccgggtgggctgtggcccaccccagcccatgaagggctccgccactg 27270353  T

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Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 51001627 - 51001475
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||| |||||| ||||||||| |||| |||||  || | ||||||| ||||||| ||||||||||||| ||||| ||||||          
T  51001627 ccactacaccaatttgcgggaatt-ggatcaaccgaaacctaaaaaagacataaaattgtataaaatattgcaaaatagacttataaacgttgatttttt 51001529  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
           |||||||||||||||||||||||||||||||||||||||||||||||    
T  51001528 aatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 51001475  T

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Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 50767186 - 50767093
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||| | |||||||||||| |||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||    
T  50767186 ccactacaccactttgcggaaatttggatcaatcaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataatcgttga 50767093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 44134747 - 44134671
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  44134747 atttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 44134671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6756094 - 6756007
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||| | ||||| | ||||||||| ||||||||||||||||||    
T  6756094 ccactacaccaatttgcgggaatttggatcaaccgaaacataaaaccgacataaaatagtataaaatctcgcaaaatagacctataat 6756007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 10096349 - 10096436
Alignment:
Q  1 ccactacaccattt-gcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||| ||||||||||||||||| | |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  10096349 ccactacaccattttgcaggaatttggatcaatcgaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 10096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13233495 - 13233408
Alignment:
Q  1 ccactacacc-atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||| |||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  13233495 ccactacaccgatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 13233408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13612985 - 13613072
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| | ||||||||||||||||    
T  13612985 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaaccgacataaaattgtataaaatctcggaaaatagacctataat 13613072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31664060 - 31664147
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  31664060 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattttataaaatcttgcaaaatagacctataat 31664147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18491452 - 18491367
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctata 85  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||    
T  18491452 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctata 18491367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12700461 - 12700548
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  12700461 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 12700548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 22647263 - 22647110
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgc-aaaatagacctataatcgttgannnnn 98  Q
    ||||||||||| |||||| |||||||||||||| |||| ||||||| || ||||||||||||||||||| || |||| | ||||||| |||||||         
T  22647263 ccactacaccactttgcatgaatttggatcaacaaaaatataaaac-gacacaaaattgcataaaatctcgcaaaaaaaaacctatagtcgttgattttt 22647165  T
Q  99 nnnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
            | || |||||||||||||||| |||||||||||||||||||||||||    
T  22647164 ttatttttctggatgggccgtggcccacctcagcccatgaagggctccgccactg 22647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36584688 - 36584601
Alignment:
Q  1 ccactacaccattt-gcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| || || ||||||||||||||| ||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  36584688 ccactacaccaattagcgggaatttggatcaactaaaacttaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 36584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38141450 - 38141537
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| |||||||||  |||||||||||||||||    
T  38141450 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcacaaaatagacctataat 38141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43564683 - 43564596
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||| ||||||    
T  43564683 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacttataat 43564596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44745483 - 44745566
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagaccta 83  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||    
T  44745483 ccactacaccaatttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagaccta 44745566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4632711 - 4632803
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttg 92  Q
    ||||||||||| ||||| |||||||||||||||| |||  ||||||  | ||||||||| ||||||||| ||||||||||| |||||||||||    
T  4632711 ccactacaccactttgcgggaatttggatcaaccgaaatctaaaactaacacaaaattgtataaaatctcgcaaaatagacttataatcgttg 4632803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 10096463 - 10096555
Alignment:
Q  2 cactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||||||| ||||| | |||||||||||||| |||| ||||||||| ||||||||  ||||||||| |||||||  |||||||||||||||    
T  10096463 cactacaccactttgcggaaatttggatcaaccgaaacttaaaaccgacacaaaattatataaaatctcgcaaaatgaacctataatcgttga 10096555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 31581654 - 31581730
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  31581654 atttgcgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 31581730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11650859 - 11650946
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||| ||| | ||||||| |||||||||  ||||||| |||||||||    
T  11650859 ccactacaccaatttgcgggaatttggatcaaccaaaacctaaaatcgacataaaattgtataaaatctcccaaaataaacctataat 11650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36954903 - 36954990
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| || ||||||||||||| |||| ||||| ||| | ||||||| ||||||||| ||||||||||||||||||    
T  36954903 ccactacaccaatttgcggggatttggatcaaccgaaacgtaaaatcgacataaaattgtataaaatctcgcaaaatagacctataat 36954990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41832642 - 41832555
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||  ||||| ||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  41832642 ccactacaccaatttgcgagaattgggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacctataat 41832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44817443 - 44817530
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||||||||||||||||| | |||  ||||||||| | ||||||| ||||||||| ||| ||||||||||||||    
T  44817443 ccactacaccaatttgcaggaatttggatcaatcgaaatctaaaaccgacataaaattgtataaaatctcgcagaatagacctataat 44817530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16925371 - 16925284
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||| | |||||||||||||| |||| ||||||||| | ||| ||| |||||||||  |||||||||||||||||    
T  16925371 ccactacaccaatttgcggaaatttggatcaaccgaaacctaaaaccgacataaatttgtataaaatctcacaaaatagacctataat 16925284  T

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Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7638763 - 7638842
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaataga 79  Q
    ||||||||||| |||||  |||||||| ||| || |||| ||||| ||| ||||||||| ||||||||||||||||||||    
T  7638763 ccactacaccactttgcgagaatttgggtcagccgaaacgtaaaatcgacacaaaattgtataaaatcttgcaaaataga 7638842  T

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Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22647376 - 22647289
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||| | |||||||| ||||||| |||| ||||||  | | ||||||| ||||||||| ||||||||||||||||||    
T  22647376 ccactacaccaatttccgggaatttgaatcaaccgaaacctaaaacaaacataaaattgtataaaatctcgcaaaatagacctataat 22647289  T

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Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 13857654 - 13857612
Alignment:
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  13857654 gtgggccgtggcccaccctagcccatgaagggcttcgccactg 13857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 5111624 - 5111587
Alignment:
Q  157 gtatccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5111624 gtatccggtgtccgtgcccgtatccgtgcttcataggt 5111587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 13869183 - 13869142
Alignment:
Q  112 tgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  13869183 tgggccgtggcccaccctaacccatgaagggctccgccactg 13869142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 36801885 - 36801958
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||||||| ||| || |||| ||||||||| ||||||||  ||||||||| ||||||||||| ||| ||||||    
T  36801885 ggaatttggttcagccgaaacctaaaaccgacacaaaattatataaaatctcgcaaaatagacttatgatcgtt 36801958  T

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Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 36955136 - 36955169
Alignment:
Q  120 ggcccaccccagcccatgaagggctccgccactg 153  Q
    ||||||||||||||||||||||||||||||||||    
T  36955136 ggcccaccccagcccatgaagggctccgccactg 36955169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 50767297 - 50767213
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||| ||||||| |||| ||||||||| | |||| || ||||||||| | ||||||||||||||||    
T  50767297 actacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 50767213  T

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Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 54795624 - 54795708
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||| ||||| |||||||| ||||||| |||| ||||||||| | |||| || ||||||||| | ||||||||||||||||    
T  54795624 actacaccactttgcgggaatttgaatcaaccgaaacctaaaaccgacataaaaatgtataaaatctcg-aaaatagacctataat 54795708  T

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Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13857764 - 13857680
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||||||||| ||| ||| ||||||||||| || |||| ||||||| | ||||||||| |||||||||  ||||||| ||||||    
T  13857764 ccactacaccactttacagaaatttggatcagccgaaacttaaaaccaacacaaaattgtataaaatctcacaaaatacacctat 13857680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 9046131 - 9046178
Alignment:
Q  44 accgatacaaaattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||| ||||||||| ||||||||| |||||||||| |||||||||||    
T  9046131 accgacacaaaattgtataaaatctcgcaaaatagatctataatcgtt 9046178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 13869282 - 13869211
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagaccta 83  Q
    ||||||| ||||||||||| || |||| ||||||||| |||||||   |||||||||  |||||||||||||    
T  13869282 tttgcagaaatttggatcagccgaaacctaaaaccgacacaaaatgatataaaatctcacaaaatagaccta 13869211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19653538 - 19653624
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| ||||  |||||||||||||||| |||| ||||| ||| | ||||||| |||||||||  | |||||||||||||||    
T  19653538 ccactacaccaatttgtgggaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcac-aaatagacctataat 19653624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 22234954 - 22234984
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||||||||||||    
T  22234954 gtgtccgtgtccgtatccgtgcttcataggt 22234984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 23293069 - 23293103
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    ||||||||||||||||||||| |||||||||||||    
T  23293069 tccggtgtccgtgtccgtatctgtgcttcataggt 23293103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 28470375 - 28470341
Alignment:
Q  158 tatccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||| ||||||||||||||||||||    
T  28470375 tatccggtgtccgtatccgtatccgtgcttcatag 28470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 37203254 - 37203220
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||| ||||||||||||||||||    
T  37203254 tccggtgtccgtgtccatatccgtgcttcataggt 37203220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 192
Target Start/End: Complemental strand, 4157131 - 4157102
Alignment:
Q  163 ggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||||||||||||||||||    
T  4157131 ggtgtccgtgtccgtatccgtgcttcatag 4157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 18707775 - 18707738
Alignment:
Q  54 aattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  18707775 aattgtataaaatcttgcaaagtagacctataatcgtt 18707738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 18735278 - 18735241
Alignment:
Q  54 aattgcataaaatcttgcaaaatagacctataatcgtt 91  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  18735278 aattgtataaaatctcgcaaaatagacctataatcgtt 18735241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 192
Target Start/End: Complemental strand, 20633458 - 20633429
Alignment:
Q  163 ggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||||||||||||||||||    
T  20633458 ggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 4632617 - 4632681
Alignment:
Q  20 aatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctat 84  Q
    ||||| |||||||| || | ||||| ||| ||||||||| ||| ||||| |||||||||||||||    
T  4632617 aatttagatcaaccgaatcctaaaatcgacacaaaattgtatataatctcgcaaaatagacctat 4632681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 11110754 - 11110786
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    ||||||||||||||| |||||||||||||||||    
T  11110754 tccggtgtccgtgtcggtatccgtgcttcatag 11110786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 40228342 - 40228406
Alignment:
Q  19 gaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagaccta 83  Q
    ||||||||||||||| |||| |||||| || | ||||| | ||||||||| || |||||||||||    
T  40228342 gaatttggatcaaccgaaacctaaaactgacataaaatcgtataaaatctcgccaaatagaccta 40228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 46084049 - 46084081
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||| ||||||||||    
T  46084049 tccggtgtccgtgtccgtatccatgcttcatag 46084081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 19198 - 19048
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttgannnnnn 99  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||          
T  19198 ccactacaccactttgcaggaatttggataaaccaaaacataaaaccgacacaaaattgcataaaatctcgcaaaatagacctatgatcgttgatttttt 19099  T
Q  100 nnnnnnnccgggtgggccgtggcccaccccagcccatgaagggctccgcca 150  Q
           ||||||||||||||||||||||||||||||||||||||||||||    
T  19098 tatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcca 19048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 19293 - 19224
Alignment:
Q  18 ggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||||||| |||||||    
T  19293 ggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagatctataat 19224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 331922 - 331831
Alignment:
Q  3 actacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  331922 actacaccactttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 331831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 332037 - 331950
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||  ||||||||||||||| |||| ||||| ||| | ||||||| ||||||||| |||||||||| |||||||    
T  332037 ccactacaccaatttgcgagaatttggatcaaccgaaacctaaaatcgacataaaattgtataaaatctcgcaaaatagatctataat 331950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 11318 - 11237
Alignment:
Q  12 tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  11318 tttgcacgaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatctcgcaaaataaatctataatcgttga 11237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 11210 - 11166
Alignment:
Q  109 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11210 gggtgggccgtggcccaccccagcccatgaagggctccgccactg 11166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 11432 - 11356
Alignment:
Q  11 atttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    |||||| |||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||| || |||||||    
T  11432 atttgcgggaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaattgatctataat 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1256 - 1163
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataatcgttga 93  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||| |||||||||| |||||||    
T  1256 ccactacaccactttgcaggaatttggatcaaccaaaacataaaatcgacacaaaattgcataaaatctcgaaaagtagacctatagtcgttga 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1369 - 1282
Alignment:
Q  1 ccactacacca-tttgcaggaatttggatcaaccaaaacataaaaccgatacaaaattgcataaaatcttgcaaaatagacctataat 87  Q
    ||||||||||| |||||  ||||||||||||||| |||| ||||||||| | ||||||| ||||||||| ||||||||||| ||||||    
T  1369 ccactacaccaatttgcgagaatttggatcaaccgaaacctaaaaccgacataaaattgtataaaatctcgcaaaatagacatataat 1282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 9874 - 9840
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||||||||||||||||    
T  9874 tccggtgtccgtgtccgtatccgtgcttcataggt 9840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 8774 - 8740
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcataggt 194  Q
    |||||||||||||||||||||| ||||||||||||    
T  8774 tccggtgtccgtgtccgtatccatgcttcataggt 8740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 303934 - 303972
Alignment:
Q  111 gtgggccgtggcccaccccagcccatgaagggctccgcc 149  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  303934 gtgggccgtgacccaccctagcccatgaagggctccgcc 303972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 46658 - 46625
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatagg 193  Q
    |||| |||||||||||||||||||||||||||||    
T  46658 tccgatgtccgtgtccgtatccgtgcttcatagg 46625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 547 - 575
Alignment:
Q  162 cggtgtccgtgtccgtatccgtgcttcat 190  Q
    |||||||||||||||||||||||||||||    
T  547 cggtgtccgtgtccgtatccgtgcttcat 575  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 23399 - 23371
Alignment:
Q  164 gtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||||||||||    
T  23399 gtgtccgtgtccgtatccgtgcttcatag 23371  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 130458 - 130426
Alignment:
Q  160 tccggtgtccgtgtccgtatccgtgcttcatag 192  Q
    |||||||||||||||||||||| ||||||||||    
T  130458 tccggtgtccgtgtccgtatccatgcttcatag 130426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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