View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14975_low_44 (Length: 206)
Name: NF14975_low_44
Description: NF14975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14975_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 45044816 - 45044642
Alignment:
| Q |
11 |
tcgaagaaaataaacagtacacacaggttttcaactcatttcaccccaaagttacaatacaaaggcgttnnnnnnnncatacc--tcagattctcctt-a |
107 |
Q |
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| T |
45044816 |
tcgaaaaaaataaacagtacacatagattctcaactcatttcaccccaaagttacaa-----aggcgttaaaaaaaacatatcattcagattctccttta |
45044722 |
T |
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| Q |
108 |
attatcaatggattcctcctatcgtaacatggtatgtacgcaaaagatgctcccnnnnnnncatttatttatgtggtttc |
187 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
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| T |
45044721 |
attatcaatgaattcctcctatcgtaacatggtatgtacgcaaacgatgctccctttttttcatttatttatgtggtttc |
45044642 |
T |
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