View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14977_high_11 (Length: 343)
Name: NF14977_high_11
Description: NF14977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14977_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 324
Target Start/End: Complemental strand, 15570989 - 15570675
Alignment:
| Q |
8 |
ggagtagcataggtagggttctattatttataccaacatggaatttaattgattacgtcatataattgtacacgtataatttgcatttaatatagtgggg |
107 |
Q |
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| T |
15570989 |
ggagtagcatgggtagggttctattatttataccaacatggaatttaattggttacgtcatataattgtacacgtataatttgcatttaatatagtgggg |
15570890 |
T |
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| Q |
108 |
ttggcattggtggatttattgtaatagggggcaactcgacaatgcatatattttaatgctttaggtaaaaatattgaaacaacaatggaatgcaaaatga |
207 |
Q |
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| T |
15570889 |
ttggcattggtggatttattgtaatagggggcaactcgacaatgcatatattttaatgctttaggtaaaaatattgaaacaacaatggaatgcaaaatga |
15570790 |
T |
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| Q |
208 |
ttgttttgcatnnnnnnngttagttattaatttataataacataaagtgannnnnnnnatagaataata-ttttttgaaaagaacgcacaataatatgct |
306 |
Q |
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| T |
15570789 |
ttgttttgcataaaaaaagttagttttttattt---atgacataaagtgattttttttatagaataatatttttttaaaaagaacgcacaataatatgct |
15570693 |
T |
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| Q |
307 |
tcatttgcatgaatgtag |
324 |
Q |
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|||||||||||||||||| |
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| T |
15570692 |
tcatttgcatgaatgtag |
15570675 |
T |
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