View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14977_high_13 (Length: 296)
Name: NF14977_high_13
Description: NF14977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14977_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 40954744 - 40955009
Alignment:
| Q |
16 |
actcctatatactccatgttttaaactagaatgattctttatcttgaaccctaggataaatgaattgcatgaagtttcaatgaagggctgaagttaatgt |
115 |
Q |
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| T |
40954744 |
actcctatatactccatgttttaaactagaatgattctttatcttgaaccctaggataaatgaattgcatgaagtttcaatgaagggctgaagttaatgt |
40954843 |
T |
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| Q |
116 |
tatgtttaaaaaacttgagacttttaatgtataattagtgtgtgaaaaatatgtatgagggccaaagttatgataatttagttaattaagttattttctg |
215 |
Q |
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| T |
40954844 |
tatgtttaaaaaacttgagacttttaatgta----tagtgtgtgaaaaatatgtatgagggccaaagttatgatactttagttaattaagttattttctg |
40954939 |
T |
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| Q |
216 |
tcgtaaggacctaaatgtaattctggaatgtcaactagagcccaacaaaccc-ctatatagagtgtttctt |
285 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| |
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| T |
40954940 |
tcgtaa-gacctaaatgtaattctggaatgtcaactagagcctaagaaacccactatatagagtgtttctt |
40955009 |
T |
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