View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14978_high_3 (Length: 256)

Name: NF14978_high_3
Description: NF14978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14978_high_3
NF14978_high_3
[»] chr6 (25 HSPs)
chr6 (1-240)||(4592076-4592315)
chr6 (43-234)||(4563598-4563789)
chr6 (131-240)||(4585608-4585720)
chr6 (152-239)||(4560502-4560589)
chr6 (154-240)||(4570970-4571056)
chr6 (147-240)||(4613766-4613859)
chr6 (152-240)||(4557121-4557209)
chr6 (147-244)||(4598162-4598259)
chr6 (153-225)||(4574305-4574377)
chr6 (145-240)||(4579421-4579516)
chr6 (156-221)||(4480693-4480758)
chr6 (156-219)||(4492955-4493018)
chr6 (156-221)||(4505857-4505922)
chr6 (156-240)||(4617022-4617106)
chr6 (156-199)||(4515210-4515253)
chr6 (137-240)||(4516302-4516405)
chr6 (1-36)||(4563532-4563567)
chr6 (162-240)||(4504445-4504523)
chr6 (53-98)||(4613888-4613933)
chr6 (156-232)||(4601789-4601865)
chr6 (7-43)||(4613968-4614004)
chr6 (162-212)||(3171747-3171797)
chr6 (162-240)||(4267214-4267292)
chr6 (162-220)||(4392094-4392152)
chr6 (152-222)||(4606957-4607027)
[»] chr8 (3 HSPs)
chr8 (145-240)||(20863891-20863986)
chr8 (156-240)||(1674226-1674310)
chr8 (125-223)||(16686332-16686432)
[»] chr5 (1 HSPs)
chr5 (156-239)||(28000148-28000231)
[»] chr3 (1 HSPs)
chr3 (156-237)||(1281114-1281195)
[»] scaffold0477 (1 HSPs)
scaffold0477 (162-240)||(4734-4812)
[»] chr7 (1 HSPs)
chr7 (162-212)||(3086426-3086476)


Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 4592076 - 4592315
Alignment:
Q  1 catgccatataattatccaatatgcatatattcaaaccattcagtttaggcactctagctgaagatgagttcacttacatcatcacttaaattcaatagg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4592076 catgccatataattatccaatatgcatatattcaaaacattcagtttaggaactcttgctgaagatgagttcacttacatcatcacttaaattcaatagg 4592175  T
Q  101 ggaagatcaatcaattattgttgaactgctttgcataaaaaattacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4592176 ggaagatcaatcaattattgttgaactgctttgcataaaaaattacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcat 4592275  T
Q  201 atatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  4592276 atatgaacaacctccaggtctcgtgttctcctctgccttc 4592315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 4563598 - 4563789
Alignment:
Q  43 agtttaggcactctagctgaagatgagttcacttacatcatcacttaaattcaataggggaagatcaatcaattattgttgaactgctttgcataaaaaa 142  Q
    |||| ||| ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||||    
T  4563598 agttcaggaactcttgctgaagatgacttcacttacatcagaacttaaattcaataggggaagatcaattaattatcgttgaactgaattgcataaaaaa 4563697  T
Q  143 -ttacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctcc 234  Q
     ||||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| | ||||||    
T  4563698 gttacttaaa-ttgattttgtttaagcaaaacctccttgatcactttgtccaagttcatgtatgaacaacctccagctctcgtgttttcctcc 4563789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 4585608 - 4585720
Alignment:
Q  131 ttgcataaaaaatt-acttaaa--tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgct 227  Q
    |||||||||||||| ||||| |  ||||||||||||||||||| |||||||| |||| ||| |||||||| || ||||||||||||||||||||||||      
T  4585608 ttgcataaaaaattcacttataggtttgattttatttaagcaaaacctccttaatcactttttccaagtttatgtatgaacaacctccaggtctcgtgtc 4585707  T
Q  228 ctcctccgccttc 240  Q
    |||||||||||||    
T  4585708 ctcctccgccttc 4585720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 4560502 - 4560589
Alignment:
Q  152 tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgcctt 239  Q
    ||||||||| |||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||||  | ||||||||||    
T  4560502 tttgattttgtttaagcaacacctccttaatcactttctccaagttcatgtatgaacaacctccaggtctcgtgtacacctccgcctt 4560589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 4570970 - 4571056
Alignment:
Q  154 tgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||||||||||||||| |||||||| |||| ||| ||||||||||| ||||||||||| ||||||||||||  |||||||||||||    
T  4570970 tgattttatttaagcaaaacctccttaatcactttttccaagttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttc 4571056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 4613859 - 4613766
Alignment:
Q  147 ttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    |||| ||||||||| ||| |||| |||||| ||||||| |||||||||||||||||||||||||||||| |||||||||  |||||| ||||||    
T  4613859 ttaagtttgattttgtttcagcagcacctcattgatcactttgtccaagttcatatatgaacaacctcctggtctcgtgtcctcctctgccttc 4613766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 4557121 - 4557209
Alignment:
Q  152 tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||||||| ||||||||| |||||||| |||| ||| ||||| ||||| ||||||||||| ||||||||||||  |||||||||||||    
T  4557121 tttgattttgtttaagcaaaacctccttaatcactttttccaaattcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttc 4557209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 4598162 - 4598259
Alignment:
Q  147 ttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttcatct 244  Q
    |||| ||||||| | |||||| ||||||||||| |||| ||| || |||||||| ||||||||||||||| |||||||   |||||||||||||||||    
T  4598162 ttaagtttgattctgtttaagaaacacctccttaatcactttctctaagttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatct 4598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 4574305 - 4574377
Alignment:
Q  153 ttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtg 225  Q
    |||||||| |||||||||||||||||| |||| ||| ||||||||  | ||||||||||||||||||||||||    
T  4574305 ttgattttgtttaagcaacacctccttaatcactttctccaagtttgtgtatgaacaacctccaggtctcgtg 4574377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 4579421 - 4579516
Alignment:
Q  145 acttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    |||||| || |||||| ||| || ||||||||||| |||| ||| ||||||||||| |||||||| |||||||||||||||  ||||||| |||||    
T  4579421 acttaagttcgattttgtttgagtaacacctccttaatcactttctccaagttcatgtatgaacagcctccaggtctcgtgtcctcctccaccttc 4579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 4480693 - 4480758
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtct 221  Q
    ||||| ||||||||| |||||||| |||| ||||||||||||||| ||||||||||| ||||||||    
T  4480693 attttgtttaagcaagacctccttaatcactttgtccaagttcatgtatgaacaaccaccaggtct 4480758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 4492955 - 4493018
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggt 219  Q
    ||||| ||||||||| || |||||||||| ||||||||||||||| ||||||||||| ||||||    
T  4492955 attttgtttaagcaagacatccttgatcactttgtccaagttcatgtatgaacaaccaccaggt 4493018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 4505857 - 4505922
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtct 221  Q
    ||||| |||||||||||||||||| || | |||||||||||||||  |||||||||| ||||||||    
T  4505857 attttgtttaagcaacacctccttaataactttgtccaagttcatgaatgaacaaccaccaggtct 4505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 4617022 - 4617106
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||| |||||||||||| ||||| || | ||||| ||||||||| ||||||||||| || ||||| ||| ||||||| ||||||    
T  4617022 attttgtttaagcaacacatccttaataactttgttcaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttc 4617106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 4515253 - 4515210
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttca 199  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||    
T  4515253 attttgtttaagcaacacctccttgatcactttgtccaagttca 4515210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 4516302 - 4516405
Alignment:
Q  137 aaaaaattacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgc 236  Q
    ||||||| |||| ||| | ||||| ||| |||| ||||||||| |||| ||| |||||||||| |||||||||||| || ||||| |||  |||||| ||    
T  4516302 aaaaaatcactttaatctaattttgtttgagcagcacctccttaatcactttttccaagttcacatatgaacaaccacctggtcttgtgtcctcctctgc 4516401  T
Q  237 cttc 240  Q
    ||||    
T  4516402 cttc 4516405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 4563532 - 4563567
Alignment:
Q  1 catgccatataattatccaatatgcatatattcaaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  4563532 catgccatataattatccaatatgcatatattcaaa 4563567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 4504523 - 4504445
Alignment:
Q  162 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||||||| || ||||| |||| ||||||||||||||| ||||||||||| ||| |||| |||  |||||| ||||||    
T  4504523 tttaagcaagacgtccttaatcactttgtccaagttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttc 4504445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 4613933 - 4613888
Alignment:
Q  53 ctctagctgaagatgagttcacttacatcatcacttaaattcaata 98  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  4613933 ctcttgctgaagatcagttcatttacatcatcacttaaattcaata 4613888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 4601789 - 4601865
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcct 232  Q
    ||||| |||||||||||||||||| || | |||||||| |||| | ||||||||||| ||  |||| ||||||||||    
T  4601789 attttgtttaagcaacacctccttaataactttgtccaggttcttgtatgaacaaccacctagtctagtgctctcct 4601865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 4614004 - 4613968
Alignment:
Q  7 atataattatccaatatgcatatattcaaaccattca 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4614004 atataattatccaatgtgcatatattcaaaccattca 4613968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 3171747 - 3171797
Alignment:
Q  162 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacc 212  Q
    ||||||||| |||||||| |||| ||| ||||||||||| |||||||||||    
T  3171747 tttaagcaagacctccttaatcactttatccaagttcatgtatgaacaacc 3171797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 4267292 - 4267214
Alignment:
Q  162 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||||||  |||||||| || | ||||||||||||||| |||||| |||| |||||||| ||| |||| || ||||||    
T  4267292 tttaagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttc 4267214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 4392152 - 4392094
Alignment:
Q  162 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtc 220  Q
    ||||||||| |||||||| |||| |||||||||||||||  ||||| |||| |||||||    
T  4392152 tttaagcaagacctccttaatcagtttgtccaagttcatgaatgaagaaccaccaggtc 4392094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 4607027 - 4606957
Alignment:
Q  152 tttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctc 222  Q
    ||||||||| ||||||||| |||| ||| |||| ||| ||||||||||| |||||| |||| || ||||||    
T  4607027 tttgattttgtttaagcaaaaccttcttaatcactttttccaagttcatgtatgaaaaaccacctggtctc 4606957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 20863986 - 20863891
Alignment:
Q  145 acttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    |||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||| | ||||| |||  |||||| ||||||    
T  20863986 acttaagtttgattttgtttaagcaacacctccttaatcactttgtccaagttcatatatgaaccaccttccggtcttgtgtcctcctctgccttc 20863891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 1674226 - 1674310
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||| |||||||||||| ||||| |||| ||||||||||||||| ||||||||||| || ||||| ||| ||||||| ||||||    
T  1674226 attttgtttaagcaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttc 1674310  T

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Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 16686432 - 16686332
Alignment:
Q  125 actgctttgcataaaaaa--ttacttaaatttgattttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctc 222  Q
    ||||| ||||||||||||  | |||||  ||||||||| ||||||||| |||||| | |||| ||| ||||||||||| ||||||||||| |||||||||    
T  16686432 actgcattgcataaaaaaagtcacttaggtttgattttgtttaagcaaaacctccataatcactttttccaagttcatgtatgaacaaccaccaggtctc 16686333  T
Q  223 g 223  Q
    |    
T  16686332 g 16686332  T

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Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 28000231 - 28000148
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgcctt 239  Q
    ||||| ||||| |||||| ||||| |||| ||||||||||||||| ||||||||||| || ||||| ||| ||||||| |||||    
T  28000231 attttgtttaaacaacacttccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgcctt 28000148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 1281114 - 1281195
Alignment:
Q  156 attttatttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgcc 237  Q
    ||||| |||||||||||  ||||| |||| |||||| |||||||| ||||||||||| || ||||| ||| |||||||||||    
T  1281114 attttgtttaagcaacatttccttaatcactttgtcgaagttcatgtatgaacaaccacccggtctagtgttctcctccgcc 1281195  T

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Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 4812 - 4734
Alignment:
Q  162 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgctctcctccgccttc 240  Q
    ||||||||  |||||||| |||| ||||||||||||||| |||||||| || ||||  || ||| ||||||| ||||||    
T  4812 tttaagcatgacctccttaatcactttgtccaagttcatgtatgaacagccaccagaactggtgttctcctctgccttc 4734  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 3086426 - 3086476
Alignment:
Q  162 tttaagcaacacctccttgatcaatttgtccaagttcatatatgaacaacc 212  Q
    ||||||||| |||||||| || | ||||||||||||||| |||||||||||    
T  3086426 tttaagcaagacctccttaataactttgtccaagttcatgtatgaacaacc 3086476  T

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