View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14979_low_1 (Length: 710)

Name: NF14979_low_1
Description: NF14979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14979_low_1
NF14979_low_1
[»] chr5 (15 HSPs)
chr5 (19-525)||(33867092-33867598)
chr5 (230-340)||(33904847-33904957)
chr5 (228-346)||(33736433-33736551)
chr5 (246-342)||(33698933-33699029)
chr5 (232-346)||(33680385-33680499)
chr5 (212-326)||(33763688-33763801)
chr5 (230-340)||(33823141-33823251)
chr5 (27-108)||(33749074-33749155)
chr5 (23-101)||(33698758-33698836)
chr5 (230-332)||(33750175-33750277)
chr5 (42-107)||(33763447-33763512)
chr5 (26-107)||(33821868-33821949)
chr5 (23-102)||(33680162-33680241)
chr5 (42-101)||(33904676-33904735)
chr5 (49-107)||(33734624-33734682)
[»] scaffold0001 (2 HSPs)
scaffold0001 (232-340)||(149251-149359)
scaffold0001 (42-97)||(149077-149132)
[»] chr7 (2 HSPs)
chr7 (233-334)||(5468528-5468629)
chr7 (19-101)||(5470129-5470211)
[»] scaffold0247 (2 HSPs)
scaffold0247 (47-125)||(21850-21928)
scaffold0247 (181-331)||(19852-20000)
[»] scaffold0023 (2 HSPs)
scaffold0023 (19-118)||(90054-90153)
scaffold0023 (228-334)||(88888-88994)
[»] chr8 (2 HSPs)
chr8 (19-101)||(21306095-21306177)
chr8 (246-339)||(21306329-21306422)
[»] scaffold0193 (3 HSPs)
scaffold0193 (181-331)||(23300-23448)
scaffold0193 (44-114)||(24276-24346)
scaffold0193 (38-109)||(24877-24950)


Alignment Details
Target: chr5 (Bit Score: 491; Significance: 0; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 19 - 525
Target Start/End: Original strand, 33867092 - 33867598
Alignment:
Q  19 agaaaaactttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagtacatgtaacaa 118  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33867092 agaaaaactctctctattgatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagtacatgtaacaa 33867191  T
Q  119 gtattttcacatacataaagaaaatgaattataagttacattgcttctatgttattattcagtttaattaatcataagccaaatatacagtacaataagc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33867192 gtattttcacatacataaagaaaatgaattataagttacattgcttctatgttattattcagtttaattaatcataagccaaatatacagtacaataagc 33867291  T
Q  219 aactttcattatatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtcc 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33867292 aactttcattatatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtcc 33867391  T
Q  319 atgcaccttttctcacacctctagtcttacacttctccatataaacttgcttttgtccacagacaaacaaaggcatgaggcttttctttagctatatgtg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33867392 atgcaccttttctcacacctctagtcttacacttctccatatacacttgcttttgtccacagacaaacaaaggcatgaggcttttctttagctatatgtg 33867491  T
Q  419 ctttaaagggaaggttgcatagataagacaaagagagtgatactacttatcattttcatccaaaaagtgcacacaattttgcatgtgaataccgttgtta 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33867492 ctttaaagggaaggttgcatagataagacaaagagagtgatactacttatcattttcatccaaaaagtgcacacaattttgcatgtgaatatcgttgtta 33867591  T
Q  519 cacgtct 525  Q
    |||||||    
T  33867592 cacgtct 33867598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 33904847 - 33904957
Alignment:
Q  230 tatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcacctttt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33904847 tatacctgctctttgtggaactaaatgccattttccttcaccatacttctgtatacaagccttgagtagcttgtcttcctcatatgtccatgcacctttt 33904946  T
Q  330 ctcacacctct 340  Q
    ||||| |||||    
T  33904947 ctcacgcctct 33904957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 228 - 346
Target Start/End: Original strand, 33736433 - 33736551
Alignment:
Q  228 tatatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcacctt 327  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33736433 tatatacctgctctttgagaaactaaatgccattttccttcaccatacttctgtatacaagccttgagtagcttgtcttcctcatatgtccatgcacctt 33736532  T
Q  328 ttctcacacctctagtctt 346  Q
    |||||| || |||||||||    
T  33736533 ttctcaaacttctagtctt 33736551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 33698933 - 33699029
Alignment:
Q  246 ggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttctcacacctctag 342  Q
    |||||||||||||||||||||||||||||||| || || |||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  33698933 ggaactaaatgccattttccttcaccatacttgtggatgcaagccttgagtagattatcttcctcatatgtccatgcaccttttctcaaacctctag 33699029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 232 - 346
Target Start/End: Original strand, 33680385 - 33680499
Alignment:
Q  232 tacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttct 331  Q
    ||||||||||||  ||||||||||||||||| ||||||||||| || || |||||  |||||||||| ||||| ||||||||||||||||||||||||||    
T  33680385 tacctgctcttttaggaactaaatgccatttcccttcaccatatttttgaatacagtccttgagtagattgtcctcctcatatgtccatgcaccttttct 33680484  T
Q  332 cacacctctagtctt 346  Q
    || |||||| |||||    
T  33680485 caaacctctggtctt 33680499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 33763688 - 33763801
Alignment:
Q  212 aataagcaactttcattatatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctca 311  Q
    |||||||||| ||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||| |  || ||||||||||||||||| |||||||||    
T  33763688 aataagcaacattcgtta-atacctgctctctgtggaacaaaatgccattttccttcaccatacttgttaatgcaagccttgagtagcttatcttcctca 33763786  T
Q  312 tatgtccatgcacct 326  Q
    |||||||| ||||||    
T  33763787 tatgtccaggcacct 33763801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 33823141 - 33823251
Alignment:
Q  230 tatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcacctttt 329  Q
    |||||||| |||||  |||| ||||||||||||||||||||||||||| || ||  ||||||||||||  ||||||||||||||||||||||||||||||    
T  33823141 tatacctgttcttttgggaattaaatgccattttccttcaccatacttgtgaatgtaagccttgagtaagttgtcttcctcatatgtccatgcacctttt 33823240  T
Q  330 ctcacacctct 340  Q
    |||| ||||||    
T  33823241 ctcaaacctct 33823251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 33749074 - 33749155
Alignment:
Q  27 tttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagta 108  Q
    ||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||    
T  33749074 tttctctgttgatggttgggtttaaataatttaaccatctcaatctacaactttttctgcacctattcagtcctgccaagta 33749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 33698758 - 33698836
Alignment:
Q  23 aaactttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctg 101  Q
    ||||||||||| || || | ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  33698758 aaactttctctgttgattgcggggtttaaataattcaaccacctcaatctacaacttttccgacacctattcaaacctg 33698836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 230 - 332
Target Start/End: Original strand, 33750175 - 33750277
Alignment:
Q  230 tatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcacctttt 329  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||| |  ||| |||| ||||||| ||||||||||||| ||||||| | || ||||    
T  33750175 tatacctgctcttttaggaattaaatgccattttccttcaccatacttgttaatataagctttgagtaacttgtcttcctcagatgtccacgtacgtttt 33750274  T
Q  330 ctc 332  Q
    |||    
T  33750275 ctc 33750277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 33763447 - 33763512
Alignment:
Q  42 tggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagt 107  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  33763447 tggggcttaaataatttaaccacctcaatctacaactttttcggcatctactcaatcctgccaagt 33763512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 33821868 - 33821949
Alignment:
Q  26 ctttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagt 107  Q
    |||||||| |||||  | |||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  33821868 ctttctctgttaatattagggtttaaataatttacccacctcaatctacaactttttcgacatctattcaatcctgccaagt 33821949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 33680162 - 33680241
Alignment:
Q  23 aaactttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgc 102  Q
    |||||||||||||| || |  |||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||    
T  33680162 aaactttctctattgattgcagggtttaaataattcacccacctcaatctacaacttttccggcatctattcaaacctgc 33680241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 33904676 - 33904735
Alignment:
Q  42 tggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctg 101  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  33904676 tgggggttaaataatttaaccacctcaatctacagctttttcggcacctattcaatcctg 33904735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 33734624 - 33734682
Alignment:
Q  49 taaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagt 107  Q
    ||||||||||| ||||||||||||||||||||| || || |||||||||||||||||||    
T  33734624 taaataatttacccacctcaatctacaactttttcgacatctattcaatcctgccaagt 33734682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 232 - 340
Target Start/End: Original strand, 149251 - 149359
Alignment:
Q  232 tacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttct 331  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |  || ||||||||||||||||| |||||||| |||||||| |||||||||||    
T  149251 tacctgctctttgaggaactaaatgccattttccttccccatacttgtcaatgcaagccttgagtagcttatcttcctcgtatgtccaggcaccttttct 149350  T
Q  332 cacacctct 340  Q
    ||| |||||    
T  149351 cacgcctct 149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 149077 - 149132
Alignment:
Q  42 tggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaat 97  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  149077 tggggcttaaataatttaaccacctcaatctacagcttttgcggcacctattcaat 149132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 5468629 - 5468528
Alignment:
Q  233 acctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttctc 332  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| |  ||  ||||||||||||  ||||||||||| |||||||||||||||||| ||    
T  5468629 acctgctctttgaggaattaaatgccattttccttcaccatacttgttaatgtaagccttgagtaagttgtcttcctcgtatgtccatgcaccttttttc 5468530  T
Q  333 ac 334  Q
    ||    
T  5468529 ac 5468528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 5470211 - 5470129
Alignment:
Q  19 agaaaaactttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctg 101  Q
    |||||| |||| |||||| ||| |||| ||||||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  5470211 agaaaagctttttctattgatgttgggctttaaataatttatccacctcaatctacaactttttcgacatctattcaatcctg 5470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 21928 - 21850
Alignment:
Q  47 tttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagtacatgtaacaagtatttt 125  Q
    ||||||||||||| ||||||||||||||||||||| || || ||||||||||||| |||||||||||||||| ||||||    
T  21928 tttaaataatttacccacctcaatctacaactttttcgacatctattcaatcctgtcaagtacatgtaacaaatatttt 21850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 20000 - 19852
Alignment:
Q  181 tttaattaatcataagccaaatatacagtacaataagcaactttcattatatacctgctctttgtggaactaaatgccattttccttcaccatacttctg 280  Q
    ||||| |||| ||||||||||||   |||| |||||| ||| ||| |||||  |||| |||||  |||| |||||||||||||||| |||||| |||  |    
T  20000 tttaactaattataagccaaatacgtagtagaataaggaacattctttata--cctgttctttcaggaattaaatgccattttcctacaccatgcttgag 19903  T
Q  281 catacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttct 331  Q
     ||  ||||||||||    |||||||| |||||||||||||||||||||||    
T  19902 aatgtaagccttgagacagttgtcttcttcatatgtccatgcaccttttct 19852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 90153 - 90054
Alignment:
Q  19 agaaaaactttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagtacatgtaacaa 118  Q
    |||||| |||||| | || ||||| ||||||||||| || |||||||| |||||||||||||| || |||||||| ||||||| ||| ||||| ||||||    
T  90153 agaaaatctttctttgttgatggttgggtttaaatagttaaaccaccttaatctacaactttttcgacacctatttaatcctgtcaaatacatataacaa 90054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 88994 - 88888
Alignment:
Q  228 tatatacctgctctttgtggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcacctt 327  Q
    ||||||||||||||| | ||||||| |||||||||||||| ||||||||| |  || || ||||||||||  || ||||| ||||  ||||| | |||||    
T  88994 tatatacctgctcttcgaggaactagatgccattttccttgaccatacttgttaatgcatgccttgagtaagttatcttcttcattcgtccaggtacctt 88895  T
Q  328 ttctcac 334  Q
    || ||||    
T  88894 ttttcac 88888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 21306095 - 21306177
Alignment:
Q  19 agaaaaactttctctattaatggtggggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctg 101  Q
    |||||| ||| |||| || ||| ||||| |||| ||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  21306095 agaaaatcttcctctgttgatgttggggcttaagtaatttaaccacctcaatctacaactttttctgcatctattcaatcctg 21306177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 21306329 - 21306422
Alignment:
Q  246 ggaactaaatgccattttccttcaccatacttctgcatacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttctcacacctc 339  Q
    |||||||||| ||||||||||||||| ||| | |  || ||||||||||||||||  |||||||  || |||||||| ||||||||||||||||    
T  21306329 ggaactaaattccattttccttcaccgtacgtgttaatgcaagccttgagtagctcatcttccttgtaagtccatgcgccttttctcacacctc 21306422  T

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Target: scaffold0193 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 331
Target Start/End: Complemental strand, 23448 - 23300
Alignment:
Q  181 tttaattaatcataagccaaatatacagtacaataagcaactttcattatatacctgctctttgtggaactaaatgccattttccttcaccatacttctg 280  Q
    ||||| |||| ||||||||||||   |||| |||||| ||| ||| |||||  |||| |||||  |||| |||||||||||||||| |||||| |||  |    
T  23448 tttaactaattataagccaaatacgtagtagaataaggaacattcgttata--cctgttctttcaggaattaaatgccattttcctacaccatgcttgag 23351  T
Q  281 catacaagccttgagtagcttgtcttcctcatatgtccatgcaccttttct 331  Q
     ||  ||||||||||    |||||||| |||||||||||||||||||||||    
T  23350 aatgtaagccttgagacagttgtcttcttcatatgtccatgcaccttttct 23300  T

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Target: scaffold0193; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 24346 - 24276
Alignment:
Q  44 gggtttaaataatttaaccacctcaatctacaacttttccggcacctattcaatcctgccaagtacatgta 114  Q
    |||||||||||||||| ||| || |||||||||||||| || |||||||||||||||| || || ||||||    
T  24346 gggtttaaataatttacccatcttaatctacaactttttcgacacctattcaatcctgtcaggtgcatgta 24276  T

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Target: scaffold0193; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 24950 - 24877
Alignment:
Q  38 atggtggggtttaaataatttaac--cacctcaatctacaacttttccggcacctattcaatcctgccaagtac 109  Q
    ||||||||||||||||||||||||  ||||||| ||||||| |||  || ||||||||||||| || |||||||    
T  24950 atggtggggtttaaataatttaaccacacctcagtctacaattttatcgacacctattcaatcatgtcaagtac 24877  T

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