View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1497_high_12 (Length: 424)
Name: NF1497_high_12
Description: NF1497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1497_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 12 - 408
Target Start/End: Original strand, 46755288 - 46755684
Alignment:
| Q |
12 |
atgaaatggagtatgattggggagattgaattaatgtttattatggatcctactgatgtcagaaactctggcattcaaattcaattgatcttgttgtgga |
111 |
Q |
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| T |
46755288 |
atgaaatggagtatgattggggagattgaattaatgtttattatggatcctactgatgtcagaaactctggcattcaaattcaattgatcttgttgtgga |
46755387 |
T |
|
| Q |
112 |
attcgcacataaaagcaaatagacatcgcccgtaaaagtcacaaaatttcagcacaagcagcagcgtcttgactaaaggacaggttcagatcaacattca |
211 |
Q |
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|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46755388 |
catcgcccataaaagcaaatagacatcgcccataaaagtcacaaaatttcagcacaagcagcagcgtcttgactaaaggacaggttcagatcaacattca |
46755487 |
T |
|
| Q |
212 |
atacgacccatcatgcagcagggggagtctaatgaatgtactgacatctcaaagcctaactatttctgctatatttacgatacaaacttaacaatgatca |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
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| T |
46755488 |
atacgacccatcatgcagcagggggagtctaatgaatgtactgacatctcaaagccgaactatttctgctatatttatgatacaaacttaacaatgatca |
46755587 |
T |
|
| Q |
312 |
caatgttgatgtgtaaactgtatttagtatttcaaaactcaaaaatcgatatcaacaatttatcatgtttgatttactgtcggtttaacaagagcac |
408 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
46755588 |
caatgttgatgtgtaaactgtatttagtatttcaaaactcaaaaatcgatatcaacaatttatcatgtttgatttactgtcggtttagcaagagcac |
46755684 |
T |
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