View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1497_low_27 (Length: 299)
Name: NF1497_low_27
Description: NF1497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1497_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 34436098 - 34436361
Alignment:
| Q |
17 |
aattgcaagcccagcctacccttatacagtatggggtaaaacccatttctggtacgttgaaaaacttttgattccatgtccttaaatacttgttggtatc |
116 |
Q |
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| T |
34436098 |
aattgcaagcccagcctacccttatacaatatggggtaaaacccatttctggtacgttgaaaaacttttgattccatgtccttaaatacttgttggtatc |
34436197 |
T |
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| Q |
117 |
aaataaattgggtgacttttaggtaatatcattatcaataagtaaaccgtacgtcaattatattaataagtaaaccttttccagattttctatttcataa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34436198 |
aaataaattgggtgacttttaggtaatatcattatcaataagtaaaccgtacgtcaattatattaataagtaaaccttttccagattttctatttcataa |
34436297 |
T |
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| Q |
217 |
gttttagctttgatttgtgaaacaaaaggaagaaactctagtgagcaatgtccattcgtttcat |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34436298 |
gttttagctttgatttgtgaaacaaaaggaagaaactctagtgagcaatgtccattcgtttcat |
34436361 |
T |
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