View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14981_high_15 (Length: 329)
Name: NF14981_high_15
Description: NF14981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14981_high_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 12 - 329
Target Start/End: Complemental strand, 33791470 - 33791153
Alignment:
| Q |
12 |
ccaagaaaatctgattataaaattgatgatcaaacacaaaagaagtgttttgatccaaaaacaccaatggatccttaccttcaacaccacaccattgaac |
111 |
Q |
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| T |
33791470 |
ccaacaaaatctgattataaaattgatgatcaaaaacaaaagaagtgttttgatccaaaaacactaatggatccttaccttcaacaccacaccattgaac |
33791371 |
T |
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| Q |
112 |
caacgttttccttaaattagggtccattgaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaa |
211 |
Q |
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| T |
33791370 |
caacctttttcttaaattagggtccattgaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaa |
33791271 |
T |
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| Q |
212 |
agtgtaaccatttcttccaatgtcatacctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacag |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33791270 |
agtgtaaccatttcttccaatgtcatacctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacag |
33791171 |
T |
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| Q |
312 |
ttgatactaatccatcac |
329 |
Q |
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|||||||||||||||||| |
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| T |
33791170 |
ttgatactaatccatcac |
33791153 |
T |
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