View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14981_high_20 (Length: 290)

Name: NF14981_high_20
Description: NF14981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14981_high_20
NF14981_high_20
[»] scaffold0743 (1 HSPs)
scaffold0743 (137-272)||(1583-1718)
[»] chr1 (11 HSPs)
chr1 (144-244)||(12628506-12628606)
chr1 (137-235)||(25892082-25892180)
chr1 (137-235)||(51161992-51162090)
chr1 (137-235)||(34331424-34331522)
chr1 (137-235)||(36699886-36699984)
chr1 (137-235)||(36715990-36716088)
chr1 (137-228)||(41812190-41812281)
chr1 (137-235)||(29152986-29153084)
chr1 (141-235)||(43413534-43413628)
chr1 (137-225)||(15801870-15801958)
chr1 (139-235)||(12880484-12880580)
[»] chr7 (16 HSPs)
chr7 (137-235)||(9157557-9157655)
chr7 (141-235)||(39679280-39679374)
chr7 (137-235)||(48268864-48268962)
chr7 (137-217)||(40952230-40952310)
chr7 (137-235)||(28337007-28337105)
chr7 (137-244)||(24875627-24875735)
chr7 (137-228)||(28606536-28606627)
chr7 (139-225)||(28918850-28918936)
chr7 (137-235)||(24862047-24862145)
chr7 (137-235)||(37597471-37597568)
chr7 (176-235)||(25950622-25950681)
chr7 (137-235)||(28606289-28606387)
chr7 (137-235)||(45234381-45234478)
chr7 (175-235)||(13953921-13953981)
chr7 (175-235)||(13954545-13954605)
chr7 (157-225)||(43094518-43094586)
[»] chr4 (9 HSPs)
chr4 (137-235)||(24968540-24968638)
chr4 (137-235)||(50680015-50680111)
chr4 (140-272)||(37874728-37874862)
chr4 (139-244)||(17637152-17637257)
chr4 (157-235)||(25142068-25142146)
chr4 (175-235)||(47606873-47606933)
chr4 (192-235)||(24234555-24234598)
chr4 (140-235)||(35321357-35321452)
chr4 (144-221)||(51717551-51717628)
[»] chr2 (14 HSPs)
chr2 (137-235)||(5998049-5998147)
chr2 (139-235)||(33891831-33891927)
chr2 (139-235)||(39952318-39952414)
chr2 (137-235)||(6201209-6201307)
chr2 (137-235)||(32493731-32493828)
chr2 (137-244)||(41398939-41399047)
chr2 (139-235)||(41670275-41670371)
chr2 (137-244)||(32918428-32918535)
chr2 (137-234)||(7634547-7634644)
chr2 (157-235)||(3330867-3330945)
chr2 (137-235)||(21646876-21646974)
chr2 (137-225)||(21202376-21202464)
chr2 (137-235)||(21200237-21200335)
chr2 (140-208)||(28176178-28176246)
[»] chr6 (7 HSPs)
chr6 (139-235)||(7793049-7793145)
chr6 (137-235)||(17186929-17187027)
chr6 (137-230)||(13193012-13193105)
chr6 (137-235)||(30792747-30792845)
chr6 (140-234)||(12650263-12650357)
chr6 (137-235)||(21381595-21381693)
chr6 (175-235)||(21955418-21955478)
[»] chr3 (14 HSPs)
chr3 (141-235)||(35924693-35924787)
chr3 (137-228)||(45406300-45406391)
chr3 (137-228)||(47257369-47257460)
chr3 (137-228)||(19680868-19680959)
chr3 (157-235)||(41118582-41118658)
chr3 (137-235)||(36734888-36734986)
chr3 (182-235)||(17578655-17578708)
chr3 (137-244)||(30434105-30434213)
chr3 (137-244)||(39993331-39993439)
chr3 (137-220)||(21696670-21696753)
chr3 (137-235)||(7719639-7719737)
chr3 (157-235)||(46552576-46552654)
chr3 (175-235)||(21224246-21224306)
chr3 (175-235)||(30846837-30846897)
[»] chr5 (14 HSPs)
chr5 (137-244)||(9771627-9771735)
chr5 (137-225)||(32270234-32270322)
chr5 (140-235)||(17218323-17218418)
chr5 (137-235)||(394179-394277)
chr5 (157-235)||(865811-865889)
chr5 (137-235)||(36977604-36977701)
chr5 (138-235)||(26244280-26244376)
chr5 (137-235)||(42522313-42522410)
chr5 (192-235)||(2068555-2068598)
chr5 (137-235)||(10378627-10378725)
chr5 (138-235)||(7861182-7861278)
chr5 (137-202)||(10192781-10192846)
chr5 (175-235)||(6812797-6812857)
chr5 (205-244)||(38580258-38580298)
[»] chr8 (6 HSPs)
chr8 (137-225)||(32821802-32821890)
chr8 (137-235)||(41636590-41636688)
chr8 (137-272)||(33561737-33561875)
chr8 (137-225)||(17934454-17934542)
chr8 (175-235)||(41845084-41845144)
chr8 (137-211)||(21511463-21511537)
[»] scaffold0024 (1 HSPs)
scaffold0024 (137-222)||(42021-42106)
[»] scaffold0006 (1 HSPs)
scaffold0006 (137-225)||(160771-160860)


Alignment Details
Target: scaffold0743 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 1583 - 1718
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttta 236  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  1583 actatgtaaaatctcttatgatgaatatttgagttagagaatgtcaaaatctcgattttaacttatgtcaaatgaatttgaaataacttctattattttg 1682  T
Q  237 agtaaattctaagaaaccatgtttataaatacaaag 272  Q
    |||||||||||| || |||| |||||||||||||||    
T  1683 agtaaattctaaaaatccatttttataaatacaaag 1718  T

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Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 12628606 - 12628506
Alignment:
Q  144 aaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattattttaagtaaat 243  Q
    ||||||||| || |||||||||| |||||| |||||||||||||||  ||||||||||||| |||| | ||||||||||||| || |||||||| |||||    
T  12628606 aaaatctctaacaatgaatatttaagctagtgaatgtcaaaatctcatttttaacttatgttaaattattttgaaataacttttactattttaaataaat 12628507  T
Q  244 t 244  Q
    |    
T  12628506 t 12628506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 25892082 - 25892180
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||| || |||||||||| || ||| ||||||| |||||||  |||||||||||| ||||||| |||||||||||||||| ||||||    
T  25892082 actatgtaaaatttctaacaatgaatatttaagttagtgaatgtcgaaatctcatttttaacttatgccaaatgagtttgaaataacttctactatttt 25892180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 51161992 - 51162090
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||| |||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| |||||||||||||||||||||| || ||||||    
T  51161992 actatgttaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatatcaaatgaatttgaaataacttttactatttt 51162090  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 34331522 - 34331424
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||| || |||||||||| || ||| |||||  ||||||||  ||||||||||||| |||||| |||||||||| ||||| ||||||    
T  34331522 actatgtaaaatctctaacaatgaatatttaagttagtgaatgctaaaatctcatttttaacttatgttaaatgagtttgaaataatttctactatttt 34331424  T

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Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 36699984 - 36699886
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| |  ||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  36699984 actatgtaaaatctcgaacaatgaatatttaaattagtgaatgtcaaaatctcttttttaacttatatcaaatgagtttgaaataacttttactatttt 36699886  T

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Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 36716088 - 36715990
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| |  ||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  36716088 actatgtaaaatctcgaacaatgaatatttaaattagtgaatgtcaaaatctcttttttaacttatatcaaatgagtttgaaataacttttactatttt 36715990  T

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Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 41812190 - 41812281
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttcta 228  Q
    |||||||||||||||  |  |||||||||| || ||| |||||||||||||||  |||||||||||   |||||| ||||||||||||||||    
T  41812190 actatgtaaaatctcgaagaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatactaaatgagtttgaaataacttcta 41812281  T

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Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 29152986 - 29153084
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||| | || ||| |||||||||||| |   |||||||||||  ||||||| |||||||||||||||| ||||||    
T  29152986 actatgtaaaatctcaaacaatgaatatataagttagtgaatgtcaaaatattttttttaacttataccaaatgagtttgaaataacttctactatttt 29153084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 43413534 - 43413628
Alignment:
Q  141 tgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||  || |||||||||| || ||| |||| ||||||||||  ||||||||||| |||||||| ||||||||| ||| || ||||||    
T  43413534 tgtaaaatctcaaacaatgaatatttaagttagtgaatatcaaaatctcttttttaacttatatcaaatgagtttgaaataccttttactatttt 43413628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 15801958 - 15801870
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||||||||||||||  ||  ||||||||| || ||| ||||| |||||||||  |||||| |||| |||||||| ||| |||||||||    
T  15801958 actatgtaaaatctcgaacagtgaatatttaagttagtgaatgccaaaatctcttttttaatttatatcaaatgagtttaaaataactt 15801870  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 12880484 - 12880580
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||| |||| || |||||||||| || ||| | ||| ||||||| |  ||||||||||||  ||| || ||||||||||||| || ||||||    
T  12880484 tatgtaaaaactctaaccatgaatatttaagttagtgcatgccaaaatcacatttttaacttatgctaaacgagtttgaaataacttttactatttt 12880580  T

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Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 9157655 - 9157557
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  9157655 actatgtaaaatctcaaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatatcaaatgagtttgaaataacttttactatttt 9157557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 39679280 - 39679374
Alignment:
Q  141 tgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| || || ||||||| || ||  |||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||    
T  39679280 tgtaaaatctctaacaattaatatttaagttaatgaatgtcaaaatctcatttttaacttatgtaaaatgaatttgaaataacttctactatttt 39679374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 48268864 - 48268962
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| |||||| ||||||||  ||||| ||||| |||||||||||||||||||||| || ||||||    
T  48268864 actatgtaaaatctcaaacaatgaatatttaagttagtgaatgtaaaaatctcttttttaccttatatcaaatgaatttgaaataacttttactatttt 48268962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 40952310 - 40952230
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttga 217  Q
    |||||||||||| ||| || |||||||||| || ||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  40952310 actatgtaaaatatctaacaatgaatatttaagttagtgaatgttaaaatctccgttttaacttatgtcaaatgtatttga 40952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 28337007 - 28337105
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||||   || |||||||||| || ||| |||||||||||||||  ||||||| ||| |||||||| ||||||||||||| || ||||||    
T  28337007 actatgtaaaatcttgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacctatatcaaatgagtttgaaataacttttactatttt 28337105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 24875735 - 24875627
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctatta-tttt 235  Q
    |||||||||||| ||| || |||||||||| || |||  |||| |||||||||  ||||||||||||  |||||| |||||||||||||| | || ||||    
T  24875735 actatgtaaaatatctaacaatgaatatttaagttagtaaatgccaaaatctcatttttaacttatgctaaatgagtttgaaataacttccactattttt 24875636  T
Q  236 aagtaaatt 244  Q
    |||||||||    
T  24875635 aagtaaatt 24875627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 28606627 - 28606536
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttcta 228  Q
    |||||||||||||||  || |||||||||| || | | |||||| ||||||||  |||||||||||  ||||||| ||||||||||||||||    
T  28606627 actatgtaaaatctcgaacaatgaatatttaagttcgtgaatgtaaaaatctcttttttaacttataccaaatgagtttgaaataacttcta 28606536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 28918936 - 28918850
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtc-aaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||||||||||||| || |||||||||| || ||| ||||||| ||||||||  |||||||||||| ||||||| |||||||||||||    
T  28918936 tatgtaaaatctctaacaatgaatatttaagatagtgaatgtcaaaaatctc-tttttaacttatgacaaatgagtttgaaataactt 28918850  T

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Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 24862047 - 24862145
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||| || |||||||||| || ||| ||||| |||||||||  |||||||||||   |||||| |||||||||||||| | ||||||    
T  24862047 actatgtaaaatatctaacaatgaatatttaagttagtgaatgccaaaatctcatttttaacttatactaaatgagtttgaaataacttccactatttt 24862145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 37597471 - 37597568
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || || ||||||| || ||| | |||||||||||||  |||||||| || |||||||| ||||||||||||| || ||||||    
T  37597471 actatgtaaaatctcgaacaat-aatatttaagttagtggatgtcaaaatctcttttttaactcatatcaaatgagtttgaaataacttttactatttt 37597568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 25950622 - 25950681
Alignment:
Q  176 aatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||||  ||||||||||| |||||||| ||| ||||||||| || ||||||    
T  25950622 aatgtcaaaatctcttttttaacttatatcaaatgagtttaaaataacttttactatttt 25950681  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 28606289 - 28606387
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||||   || | |||||||| || | | |||||| ||||| ||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  28606289 actatgtaaaatcttgaacaaagaatatttaagatggggaatgtaaaaatttcttttttaacttatatcaaatgagtttgaaataacttttactatttt 28606387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 45234478 - 45234381
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || || ||||||| || ||| |||||||| | ||||  ||||||||||| || ||||| ||||||||||||| || ||||||    
T  45234478 actatgtaaaatctcgaacaataaatatttaagttagtgaatgtcaga-tctcttttttaacttatatcgaatgagtttgaaataacttttactatttt 45234381  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 13953921 - 13953981
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||| |||||||||  |||||||| |||  |||||| |||||||||||||||| ||||||    
T  13953921 gaatgacaaaatctcatttttaactaatgctaaatgagtttgaaataacttctactatttt 13953981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 13954545 - 13954605
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||| |||||||||  |||||||| |||  |||||| |||||||||||||||| ||||||    
T  13954545 gaatgacaaaatctcatttttaactaatgctaaatgagtttgaaataacttctactatttt 13954605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 43094586 - 43094518
Alignment:
Q  157 atgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||||||||| || ||| |||| |||||||||   |||||||||||  ||||||| |||||||||||||    
T  43094586 atgaatatttaagttagtgaatatcaaaatctattttttaacttataacaaatgagtttgaaataactt 43094518  T

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Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 24968638 - 24968540
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| ||||||||||||||||||||||||| || |||||||| ||| ||||||||| || ||||||    
T  24968638 actatgtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcggttttaactaatatcaaatgagtttaaaataacttttactatttt 24968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 50680015 - 50680111
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| ||||||||||||||   ||||||||||| |||||||| |||||||||| || || ||||||    
T  50680015 actatgtaaaatctcgaactatgaatatttaagttagtgaatgtcaaaatct--tttttaacttatatcaaatgagtttgaaataatttttactatttt 50680111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 37874728 - 37874862
Alignment:
Q  140 atgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattat-tttaag 238  Q
    ||||||||||||  |  |||||||||| || ||| |||||||||||||||  ||||||||||| |||||| | ||||||||||||| || ||| ||| ||    
T  37874728 atgtaaaatctcgaagaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatatcaaataagtttgaaataacttttactatatttgag 37874827  T
Q  239 taaattctaagaaa-ccatgtttataaatacaaag 272  Q
    ||||||  || ||| |||| |||| ||||||||||    
T  37874828 taaatttaaaaaaatccatttttaaaaatacaaag 37874862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 17637257 - 17637152
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatt-ttaa 237  Q
    |||||||||| ||| ||||||| ||||| || ||| || ||||||||| ||  |||||||||||  ||||||| |||||||||| ||||| |||| ||||    
T  17637257 tatgtaaaatttct-acgatgattatttaagttagtgagtgtcaaaatatcttttttaacttataacaaatgagtttgaaataaattctactattattaa 17637159  T
Q  238 gtaaatt 244  Q
    |||||||    
T  17637158 gtaaatt 17637152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 25142146 - 25142068
Alignment:
Q  157 atgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||| || ||| |||||||||||||||  | |||||||||  ||||||| ||||||| |||||||| ||||||    
T  25142146 atgaatatttaagttagtgaatgtcaaaatctctttattaacttataccaaatgagtttgaaaaaacttctactatttt 25142068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 47606873 - 47606933
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||| ||||||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  47606873 gaatgttaaaatctcttttttaacttatatcaaatgagtttgaaataacttttactatttt 47606933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 24234598 - 24234555
Alignment:
Q  192 ttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||    
T  24234598 ttttaacttatatcaaatgagtttgaaataacttctactatttt 24234555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 35321452 - 35321357
Alignment:
Q  140 atgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||  || |||||||||| |  ||| |||||| ||||| ||  ||||||||||| |||||||| ||| ||||||||| || ||||||    
T  35321452 atgtaaaatctcgaacaatgaatatttaacttagtgaatgttaaaatatcttttttaacttatatcaaatgagtttaaaataacttttactatttt 35321357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 51717628 - 51717551
Alignment:
Q  144 aaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaata 221  Q
    ||||||||  || |||||||||| || ||| |||||||||||||||  |||||||||   |||||||| |||||||||    
T  51717628 aaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttgcatcaaatgagtttgaaata 51717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 5998049 - 5998147
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| | |||||| |||||||||||||||| ||||||    
T  5998049 actatgtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatattaaatgagtttgaaataacttctactatttt 5998147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 33891831 - 33891927
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  33891831 tatgtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatatcaaatgagtttgaaataacttttactatttt 33891927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 39952318 - 39952414
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||  || |||||||||| || | | |||||||||||||||  |||||||||||  |||||||||||||||||| ||||| ||||||    
T  39952318 tatgtaaaatctcgaacaatgaatatttaagttggtgaatgtcaaaatctcttttttaacttataccaaatgaatttgaaataagttctactatttt 39952414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 6201307 - 6201209
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || ||||| |||| || ||| ||||||||| |||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  6201307 actatgtaaaatctcgaacaatgaacatttaagttagtgaatgtcaagatctcttttttaacttatatcaaatgagtttgaaataacttttactatttt 6201209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 32493731 - 32493828
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||  || ||| |||||||||||||||| ||||||||||| |||||| | ||||||||||||| || ||||||    
T  32493731 actatgtaaaatctcgaacaatgaatatta-agttagtgaatgtcaaaatctcgtttttaacttatatcaaataagtttgaaataacttttactatttt 32493828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 41399047 - 41398939
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctatta-tttt 235  Q
    |||||||||||||||  || |||||||||| || ||| |||| |||| |||||  |||| |||||| |||||||| ||||||||||||| || || ||||    
T  41399047 actatgtaaaatctcgaacaatgaatatttaagttagtgaatttcaagatctcttttttgacttatatcaaatgagtttgaaataacttttactattttt 41398948  T
Q  236 aagtaaatt 244  Q
    |||||||||    
T  41398947 aagtaaatt 41398939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 41670275 - 41670371
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||| ||  || |||||||||| || ||  ||||||||||||||   ||||||||||| |||||||| |||||||||||||||| ||||||    
T  41670275 tatgtaaaatttcaaacaatgaatatttaagttaatgaatgtcaaaatctattttttaacttatatcaaatgagtttgaaataacttctactatttt 41670371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 32918535 - 32918428
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttta 236  Q
    |||||||||||||||  || ||||||||||  | ||  |||||||||||||||  |||||||||||  ||||||| ||||||||||||| || ||||||     
T  32918535 actatgtaaaatctcgaacaatgaatatttaggttaatgaatgtcaaaatctcatttttaacttataccaaatgagtttgaaataacttatactattttg 32918436  T
Q  237 agtaaatt 244  Q
    | ||||||    
T  32918435 actaaatt 32918428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 7634644 - 7634547
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattattt 234  Q
    |||||||||||||||  || |||||||||| || ||| |||| ||||||||||  |||||||| ||  ||| ||| |||||||||||||||| |||||    
T  7634644 actatgtaaaatctcaaacaatgaatatttaagttagtgaatatcaaaatctcttttttaactaataccaattgagtttgaaataacttctactattt 7634547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 3330867 - 3330945
Alignment:
Q  157 atgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||| || ||| |||||||||||||||  |||||| | || ||||||| |||||||||||||| || ||||||    
T  3330867 atgaatatttaagttagtgaatgtcaaaatctcttttttaaatcatatcaaatggatttgaaataacttttactatttt 3330945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 21646974 - 21646876
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || ||||||||||  | ||| |||||||||||| ||  |||||| ||||  ||||||| ||||||||||||| || ||||||    
T  21646974 actatgtaaaatctcgaacaatgaatatttaggttagtgaatgtcaaaatatcttttttaatttataacaaatgagtttgaaataacttatactatttt 21646876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 21202464 - 21202376
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||||||||||||||  || |||||||||  || ||| |||||||||| ||||  ||||||| ||| |||||||| |||||||| ||||    
T  21202464 actatgtaaaatctcgaacaatgaatattcaagttagtgaatgtcaaactctcttttttaacctatatcaaatgattttgaaatgactt 21202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 21200237 - 21200335
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||  || ||| |||||||||| ||||  |||||||  || |||||||| |||||||| |||| || ||||||    
T  21200237 actatgtaaaatctcgaacaatgaatattcaagttagtgaatgtcaaactctctcttttaacccatatcaaatgattttgaaatgacttttactatttt 21200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 28176246 - 28176178
Alignment:
Q  140 atgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaa 208  Q
    ||||||||||||  || |||||||||| || ||  |||||||||||||||  ||||||||||| |||||    
T  28176246 atgtaaaatctcgaacaatgaatatttaagttaatgaatgtcaaaatctcttttttaacttatatcaaa 28176178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 7793145 - 7793049
Alignment:
Q  139 tatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||||||||  || |||||||||  |||||| |||||||| ||||||| ||||||    
T  7793145 tatgtaaaatctctaacgatgaatatttaagttagtgaatgtcaaaatctcatttataacttatgctaaatgagtttgaaattacttctactatttt 7793049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 17186929 - 17187027
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| |||||||||||||||  |||||||||||  | ||||||||| ||||||||| || ||||||    
T  17186929 actatgtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttataccgaatgaatttaaaataacttatactatttt 17187027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 13193012 - 13193105
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctatt 230  Q
    |||| ||||||||||  || |||||||||| |||||| ||||||| ||||||   ||||||||||| |||||||| ||||||||||||| ||||    
T  13193012 actacgtaaaatctcgaacaatgaatatttaagctagtgaatgtcgaaatctattttttaacttatatcaaatgagtttgaaataacttttatt 13193105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 30792845 - 30792747
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  |  || ||||||| || ||| |||||||||||||||  |||||||||||   |||||| |||||||||||||||| ||||||    
T  30792845 actatgtaaaatctcgaataataaatatttaagttagtgaatgtcaaaatctcttttttaacttatactaaatgagtttgaaataacttctactatttt 30792747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 12650263 - 12650357
Alignment:
Q  140 atgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattattt 234  Q
    ||||||||| ||  || |||||||| | || ||| |||||||||||||||  | ||| ||||| |||||||| |||||||||||||||| |||||    
T  12650263 atgtaaaatttcgaacaatgaatatgtaagttagtgaatgtcaaaatctctttcttagcttatatcaaatgagtttgaaataacttctactattt 12650357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 21381595 - 21381693
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||  || |||||||||| |  ||| |||||| ||||||||  ||||||||||| | |||||| ||||||||||||| || ||||||    
T  21381595 actatgtaaaatttcgaacaatgaatatttaaattagtgaatgtaaaaatctcttttttaacttatatgaaatgagtttgaaataacttttactatttt 21381693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 21955478 - 21955418
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  |||| | |||| |||| ||| ||||||||||||| |||||||||    
T  21955478 gaatgtcaaaatctcttttttgagttatatcaattgagtttgaaataacttttattatttt 21955418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 35924787 - 35924693
Alignment:
Q  141 tgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| |||||||| ||| |||||||||||| ||||||    
T  35924787 tgtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatatcaaatgagtttaaaataacttctactatttt 35924693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 45406391 - 45406300
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttcta 228  Q
    |||||||||||||||  || |||||||| | || ||| |||||||||||||||  ||||||||||| |||||| | ||||||||||||||||    
T  45406391 actatgtaaaatctcgaacaatgaatatataagatagtgaatgtcaaaatctcttttttaacttatatcaaataagtttgaaataacttcta 45406300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 47257460 - 47257369
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttcta 228  Q
    |||||||||||||| | || |||||||||| |||||| || || |||||| ||  ||||||||||||| |||| | ||||||||||||||||    
T  47257460 actatgtaaaatctttaacaatgaatatttaagctagtgagtgccaaaatttcatttttaacttatgttaaattagtttgaaataacttcta 47257369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 19680868 - 19680959
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttcta 228  Q
    ||||||||||| |||  || |||||||||| || ||| |||| ||||||||||  |||||||||||  ||||||| ||||||| ||||||||    
T  19680868 actatgtaaaagctcgaacaatgaatatttaagttagtgaatatcaaaatctcttttttaacttataccaaatgagtttgaaaaaacttcta 19680959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 41118582 - 41118658
Alignment:
Q  157 atgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||| ||| || ||| |||||||||||||||  |||||||||  ||||||||| |||||||||||||||| ||||||    
T  41118582 atgaatctttaagttagtgaatgtcaaaatctcatttttaactt--gtcaaatgagtttgaaataacttctactatttt 41118658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 36734986 - 36734888
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || ||||||||||  | ||| |||||| ||||| ||  |||||||||||  ||||||| ||||||||||||| || ||||||    
T  36734986 actatgtaaaatctcgaacaatgaatatttatgttagtgaatgtgaaaatatcttttttaacttataacaaatgagtttgaaataacttatactatttt 36734888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 17578708 - 17578655
Alignment:
Q  182 aaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||  |||||||||||  |||||||||||||||||||||||| ||||||    
T  17578708 aaaatctcttttttaacttataccaaatgaatttgaaataacttctactatttt 17578655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 30434105 - 30434213
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctatta-tttt 235  Q
    |||||||||||||||  || || |||||||  | ||| ||||||||| || ||  |||||||||||  ||||||| ||||||||||||| ||||| ||||    
T  30434105 actatgtaaaatctcgaacaataaatatttaggttagcgaatgtcaagatatcttttttaacttataacaaatgagtttgaaataacttatattactttt 30434204  T
Q  236 aagtaaatt 244  Q
     ||||||||    
T  30434205 gagtaaatt 30434213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 39993331 - 39993439
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctatta-tttt 235  Q
    |||||||||||||||  ||  ||||||| | || ||  |||||||||||||    ||||||||||| |||||||| | |||||||||||||| || ||||    
T  39993331 actatgtaaaatctcgaacagtgaatatataagttaatgaatgtcaaaatcgattttttaacttatatcaaatgagtatgaaataacttctactattttt 39993430  T
Q  236 aagtaaatt 244  Q
    |||||||||    
T  39993431 aagtaaatt 39993439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 21696753 - 21696670
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaat 220  Q
    |||||||||||||||  |  || ||||||| || ||| |||||||||||||||  |||||||||||  ||||||| ||||||||    
T  21696753 actatgtaaaatctcgaaaaataaatatttgagttagtgaatgtcaaaatctcttttttaacttataccaaatgagtttgaaat 21696670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 7719737 - 7719639
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||  || ||||||| || || ||  |||||| ||||||||  |||||||||||   |||| | |||||||||||||||||||||||    
T  7719737 actatgtaaaatttcgaacaatgaatacttaagttaatgaatgttaaaatctcttttttaacttatactaaattagtttgaaataacttctattatttt 7719639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 46552654 - 46552576
Alignment:
Q  157 atgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||| || ||  |||||| ||||||||  ||||||||||| |||||||| ||||||| ||||| || ||||||    
T  46552654 atgaatatttaagttaatgaatgttaaaatctcttttttaacttatatcaaatgagtttgaaaaaacttttactatttt 46552576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 21224246 - 21224306
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||| ||||||| ||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  21224246 gaatttcaaaatatcttttttaacttatatcaaatgagtttgaaataacttttactatttt 21224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 30846897 - 30846837
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  ||||||| |||  |||| || |||||| ||||||||||||||||    
T  30846897 gaatgtcaaaatctcttttttaacatataccaaacgagtttgaagtaacttctattatttt 30846837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 9771735 - 9771627
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctatta-tttt 235  Q
    |||||||| ||||||  ||||||||||||| || ||| |||||||||||||||  |||||| |||  |||||||| ||||||||||||| || || ||||    
T  9771735 actatgtagaatctcgaacgatgaatatttaagttagtgaatgtcaaaatctcttttttaatttaaatcaaatgagtttgaaataacttttactattttt 9771636  T
Q  236 aagtaaatt 244  Q
    |||||||||    
T  9771635 aagtaaatt 9771627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 32270322 - 32270234
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||| ||||||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  32270322 actaagtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatatcaaatgagtttgaaataactt 32270234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 17218418 - 17218323
Alignment:
Q  140 atgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||  || |||||||||| || ||  |||||||||||||||  ||||||||||| ||||||||||||||||||| || || ||||||    
T  17218418 atgtaaaatctcgaacaatgaatatttaagttaatgaatgtcaaaatctcttttttaacttatatcaaatgaatttgaaataatttttactatttt 17218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 394277 - 394179
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||  || |||||||||| || ||  |||||| |||||||   |||||||||||  ||||||| |||||||||||||||||||||||    
T  394277 actatgtaaaatgtcaaacaatgaatatttaagttaatgaatgttaaaatcttttttttaacttataccaaatgagtttgaaataacttctattatttt 394179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 865811 - 865889
Alignment:
Q  157 atgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||| || ||| |||||||||||||||  ||||||||||| | |||||| ||||||||||||| || ||||||    
T  865811 atgaatatttaagttagtgaatgtcaaaatctcttttttaacttatattaaatgagtttgaaataacttttactatttt 865889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 36977604 - 36977701
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || |||||||||| || ||| |||||||||||||||  ||||||| ||| | |||||| ||||||||||||| || ||||||    
T  36977604 actatgtaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaac-tatattaaatgagtttgaaataacttttactatttt 36977701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 26244376 - 26244280
Alignment:
Q  138 ctatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||||  || |||||||||| || | | |||||| |||||||   ||||||||||| |||||||||||||||||||||| || ||||||    
T  26244376 ctatgtaaaatctcgaacaatgaatatttaagttggtgaatgttaaaatcttt-ttttaacttatatcaaatgaatttgaaataacttttactatttt 26244280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 42522313 - 42522410
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||||||  || || ||||||| || ||| |||||| |||||||   ||||||||||| |||||||| | |||||||||||||| ||||||    
T  42522313 actatgtaaaatctcgaacaataaatatttaaggtagtgaatgtaaaaatcttt-ttttaacttatatcaaatgagtatgaaataacttctactatttt 42522410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 2068555 - 2068598
Alignment:
Q  192 ttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||    
T  2068555 ttttaacttatgttaaatgagtttgaaataacttctactatttt 2068598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 10378725 - 10378627
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||| ||||||||||  || |||||||||| || | | |||||| ||||||||  ||| |||||||  | ||||||||| |||||||||||| ||||||    
T  10378725 actacgtaaaatctcgaacaatgaatatttaagttggtgaatgttaaaatctctttttaaacttataccgaatgaatttaaaataacttctactatttt 10378627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 7861278 - 7861182
Alignment:
Q  138 ctatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||||||||||||  || || ||||||| |  ||| |||||||||||||||  ||| |||||||   ||||||||||||||||| ||||| ||||||    
T  7861278 ctatgtaaaatctcaaacaat-aatatttaaattagtgaatgtcaaaatctctttttaaacttatactaaatgaatttgaaataatttctactatttt 7861182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 10192781 - 10192846
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttat 202  Q
    |||||||||||||||  || |||||||||| || |||  ||||||||||||||  |||||||||||    
T  10192781 actatgtaaaatctcgaacaatgaatatttaagttagtaaatgtcaaaatctcctttttaacttat 10192846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 6812797 - 6812857
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||  |||||||||||  ||||||| ||||||||||||| || ||||||    
T  6812797 gaatgtcaaaatatcttttttaacttataacaaatgagtttgaaataacttatactatttt 6812857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 38580258 - 38580298
Alignment:
Q  205 caaatgaatttgaaataacttctatta-ttttaagtaaatt 244  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  38580258 caaatgaattggaaataacttctattagttttaagtaaatt 38580298  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 32821802 - 32821890
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||| ||||||||||  || |||||||||| || ||| |||| ||||||||||  ||||||||||| |||||||||||| |||||||||    
T  32821802 actaagtaaaatctcgaacaatgaatatttaagttagtgaatatcaaaatctcttttttaacttatatcaaatgaatttaaaataactt 32821890  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 41636590 - 41636688
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    ||||| |||||||||  || |||||||||| || ||| |||||||||||||||  ||||||||||| | |||||| ||| ||||||||| || ||||||    
T  41636590 actatctaaaatctcgaacaatgaatatttaagttagtgaatgtcaaaatctcttttttaacttatattaaatgagtttcaaataacttttactatttt 41636688  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 33561875 - 33561737
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattat-ttt 235  Q
    ||||| |||||||||  || |||||||||| |  ||| || ||||||||||||  ||| ||| ||| ||||||||||||| ||||||||||| ||| |||    
T  33561875 actatataaaatctcgaacaatgaatatttgaattagtgattgtcaaaatctctttttgaacctatatcaaatgaatttgtaataacttctactatcttt 33561776  T
Q  236 aagtaaa-ttctaagaaa-ccatgtttataaatacaaag 272  Q
     |||||| |||||| ||| |||| |||| ||||||||||    
T  33561775 gagtaaatttctaaaaaatccatttttaaaaatacaaag 33561737  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 17934454 - 17934542
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    ||||||||||||||   || ||||| |||| || |||  ||||||||||||||  ||||||||||| |||| ||| |||||||||||||    
T  17934454 actatgtaaaatcttgaacaatgaacatttaagttagtaaatgtcaaaatctcttttttaacttatatcaattgagtttgaaataactt 17934542  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 41845084 - 41845144
Alignment:
Q  175 gaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataacttctattatttt 235  Q
    |||||||||||| ||  |||||||||||  ||||||||||||||||||||| || ||||||    
T  41845084 gaatgtcaaaatatcttttttaacttataacaaatgaatttgaaataacttatactatttt 41845144  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 21511537 - 21511463
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatga 211  Q
    |||||||||||||||  || || ||||||| || ||| |||||||||||||||  |||||||||||  |||||||    
T  21511537 actatgtaaaatctcaaacaattaatatttaagttagtgaatgtcaaaatctcttttttaacttataccaaatga 21511463  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 42106 - 42021
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagctagagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataa 222  Q
    |||||||||||||||  || |||||||||| ||  || |||||| ||||||||  ||||||||||| |||||||| ||||||||||    
T  42106 actatgtaaaatctcgaacaatgaatatttaagtgagtgaatgtgaaaatctcttttttaacttatatcaaatgagtttgaaataa 42021  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 160860 - 160771
Alignment:
Q  137 actatgtaaaatctcttacgatgaatattttagcta-gagaatgtcaaaatctcggttttaacttatgtcaaatgaatttgaaataactt 225  Q
    |||||||||||||||  || |||||||||| || || | |||||| ||||||||  ||||||||||| | |||| | |||||||||||||    
T  160860 actatgtaaaatctcgaacaatgaatatttaagttaagtgaatgtgaaaatctcttttttaacttatatgaaataagtttgaaataactt 160771  T

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