View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14981_high_24 (Length: 271)
Name: NF14981_high_24
Description: NF14981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14981_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 3189454 - 3189706
Alignment:
| Q |
16 |
aaacaaagataaggcaatggctaacgtgtggagggacttggaactgcttattctccctttcttctcctcttgtttcactatctttttcataataatatca |
115 |
Q |
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| T |
3189454 |
aaacaaagataaggcaatggctaacgtgtggagggacttggaactgcttattctccctttcttctcctcttgtttcactatctttttcataataatatca |
3189553 |
T |
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| Q |
116 |
acatcaacatcaaaatcctaggtagtaatactttctttgttgcctcatgttttaagctatcacgtgggcataggtggacctatataattaatgtactact |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3189554 |
acatcaacatcaaaatcctaggtagtaatactttctttgttgcctcatgttttaagctatcacgtgggcataggtggacctatataattaatgtactact |
3189653 |
T |
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| Q |
216 |
taccaaaattgatttttctaaatttaatttagagtattaaataagttttatag |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3189654 |
taccaaaattgatttttctaaatttaatttagagtattaaataagttttatag |
3189706 |
T |
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