View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14981_low_15 (Length: 329)

Name: NF14981_low_15
Description: NF14981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14981_low_15
NF14981_low_15
[»] chr7 (1 HSPs)
chr7 (12-329)||(33791153-33791470)


Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 12 - 329
Target Start/End: Complemental strand, 33791470 - 33791153
Alignment:
Q  12 ccaagaaaatctgattataaaattgatgatcaaacacaaaagaagtgttttgatccaaaaacaccaatggatccttaccttcaacaccacaccattgaac 111  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33791470 ccaacaaaatctgattataaaattgatgatcaaaaacaaaagaagtgttttgatccaaaaacactaatggatccttaccttcaacaccacaccattgaac 33791371  T
Q  112 caacgttttccttaaattagggtccattgaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaa 211  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791370 caacctttttcttaaattagggtccattgaactatcattactaccaagtctttttccaatgaaactacaatgagcaaatccaacagtgtgtgctcctaaa 33791271  T
Q  212 agtgtaaccatttcttccaatgtcatacctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacag 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791270 agtgtaaccatttcttccaatgtcatacctttggatttaaaagcttgtaatgtttgagaaattgaggattctggccctggaagatgtacatcattaacag 33791171  T
Q  312 ttgatactaatccatcac 329  Q
    ||||||||||||||||||    
T  33791170 ttgatactaatccatcac 33791153  T

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