View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14981_low_22 (Length: 284)
Name: NF14981_low_22
Description: NF14981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14981_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 6364388 - 6364604
Alignment:
| Q |
50 |
aatttaattgggggttcttttttataagtgtgcatctaaacaatacaaaacactcgatttgttagaaaagtgtggggttttcgctcacataagcagatga |
149 |
Q |
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| T |
6364388 |
aatttaattaagggttcttttttataagtgtgcatctagataatacaaaacattctatttgccagaaaagtgtggggttttcgctcacataagcagatga |
6364487 |
T |
|
| Q |
150 |
ttttttatgagacgtgttatatatacaaccaaaatccggacaacctttccagcatcctatcctataacattgtgggtgcatgcaaatcgaaatcggttaa |
249 |
Q |
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| T |
6364488 |
ttttttatgagacgtgttatatatacaaccaaaatccagacaacctttccaatatcctatcctataacattgtgggtgcatgcaaatcgaaatcggttaa |
6364587 |
T |
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| Q |
250 |
aaagtattacaagttgt |
266 |
Q |
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||||||||||||||||| |
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| T |
6364588 |
aaagtattacaagttgt |
6364604 |
T |
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