View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14983_high_4 (Length: 437)
Name: NF14983_high_4
Description: NF14983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14983_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 18 - 422
Target Start/End: Original strand, 2206030 - 2206434
Alignment:
| Q |
18 |
agcattacctgaattaccaaaagagaaaccattaactatgctgtaaccatctacctggggataccatcgaacttgacgattataggatggttattactta |
117 |
Q |
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|||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2206030 |
agcattacatgaattaccaaaagagaaaccattaactatgatgtaaccatctccatggggataccatcgaacttgacgattataggatggttattactta |
2206129 |
T |
|
| Q |
118 |
ttagagcaaccaagagcgtgaaccatgaaaaagataactattaaccaaatttcaagtatctttcttcatattttaaagaatttcttcattcatgttcctc |
217 |
Q |
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||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
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| T |
2206130 |
ttagagcaaccaagagcgtgaaccatggaaaagataaccattaaccaaatttcaagtttctttcttcatgttttaaagaatttcttcattcatgttcctc |
2206229 |
T |
|
| Q |
218 |
aaaatctcataccaaattactatgagaagtagtcgtgccttattcatagcatgttgcttaaactaaactttgcaatcatttgagaagaaatcattcaact |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2206230 |
aaaatctcataccaaattactatgagaagtagtcgtgccttattcatagcatgttgcttaaactaaactttgcaatcatttgagaagaaatcattcaact |
2206329 |
T |
|
| Q |
318 |
aagtggaataaaaatacctataaacagacattgtaatagagcaatctcaaagagtaagcatatcatcctcaacaatagctctacatctatagcatgtcgt |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2206330 |
aagtggaataaaaatacctataaacagacattgtaatagagcaatctcaaagagtaagcatatcatcctcaacaatagctctacatctataacatgtcgt |
2206429 |
T |
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| Q |
418 |
attgt |
422 |
Q |
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||||| |
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| T |
2206430 |
attgt |
2206434 |
T |
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