View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14983_low_7 (Length: 377)
Name: NF14983_low_7
Description: NF14983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14983_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 43919734 - 43920097
Alignment:
| Q |
1 |
agattactgcatcctggggtaatcttgtgtcgtaatacggtaaaataagatccactcatgcatcaagaacaaatatagggcacatccagcaggttcacta |
100 |
Q |
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| T |
43919734 |
agattactgcatcctggggtaatcttgtgtcgtaatacggtaaaataagatccactcatgcatcaagaacaaatatagggcacatccagcaggttcacta |
43919833 |
T |
|
| Q |
101 |
gatgattttgaatctttcttatagttcactagtactgcaccgtaaactgcaaacaacagatttagtgtaccttaatgtgcacacacaaaatggaacttaa |
200 |
Q |
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| T |
43919834 |
gatgattttgaatctttcttatagttcactagtactgcaccgtaaactgcaaacaacagatttagtgtatcttaatgtgcacacacaaaatggaacttaa |
43919933 |
T |
|
| Q |
201 |
agaataagacctttcatgaattgtgctggcttttttccccgtttacataacagtaaaatgaaaagatgatgacatttacagaatggttggagtgaaagtt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43919934 |
agaataagacctttcatgaattgtgctggcttttttccccgtttaataaacagtaaaatgaaaagatgatgacatttacagaatggttggagtgaaagtt |
43920033 |
T |
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| Q |
301 |
ttgctgctgttatacaaagcagtgtttcatacgattttgtttccaaccttgaggacaaggttga |
364 |
Q |
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| T |
43920034 |
ttgctgctgttatacaaagcagtgtttcatacgattttgtttccaaccttgaggacaaggttga |
43920097 |
T |
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