View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14984_low_11 (Length: 351)
Name: NF14984_low_11
Description: NF14984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14984_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 334
Target Start/End: Complemental strand, 41982262 - 41981945
Alignment:
| Q |
17 |
aatattttaattaattatattctatgaacgttgtaaaaagagccaacaaatggagactctcgaacaccagtttgtataaagaacattttagaaaataaaa |
116 |
Q |
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| T |
41982262 |
aatattttaattaattatattctatgaacgttgtaaaaagagccaacaaatggagactctcgaacaccagtttgtataaagaacattttag-aaataaaa |
41982164 |
T |
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| Q |
117 |
tattatttacacaccaaagaaataaaattacgtactactattaataactgaatttcttattgttgcttgtgtttaatt-atttataatccgtcggagtaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
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| T |
41982163 |
tattatttacacaccaaagaaataaaattacgtactactattaataactgaatttcttattgttgcttgtgtttaattaatttatagtccgtcggagtaa |
41982064 |
T |
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| Q |
216 |
gaagggaatgatttgtaccaaaaaagaaagaagaagggacgatgggtannnnnnnnnnnnnnnnnnnngcaaagagggaatggctgaattaatacgttgc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
41982063 |
gaagggaatgatttgtaccaaaaaagaaagaagaagggacgatgggtaattttattttattttaatttgcaaagagggaatggctgaattaatacgttgc |
41981964 |
T |
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| Q |
316 |
aattaactacgtacagtct |
334 |
Q |
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||||||||||||||||||| |
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| T |
41981963 |
aattaactacgtacagtct |
41981945 |
T |
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