View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14985_high_1 (Length: 366)

Name: NF14985_high_1
Description: NF14985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14985_high_1
NF14985_high_1
[»] chr1 (37 HSPs)
chr1 (163-348)||(11031248-11031433)
chr1 (1-174)||(11032268-11032440)
chr1 (12-237)||(35109423-35109645)
chr1 (114-294)||(22819518-22819700)
chr1 (81-209)||(32736909-32737037)
chr1 (87-209)||(918392-918515)
chr1 (142-294)||(47102667-47102821)
chr1 (114-294)||(47098653-47098833)
chr1 (83-228)||(10997016-10997159)
chr1 (81-287)||(8281374-8281581)
chr1 (114-294)||(40816642-40816822)
chr1 (86-183)||(3019791-3019888)
chr1 (116-209)||(17345432-17345525)
chr1 (85-294)||(16124342-16124553)
chr1 (114-294)||(19073017-19073199)
chr1 (114-294)||(19120907-19121089)
chr1 (54-294)||(47703761-47704004)
chr1 (121-285)||(25116537-25116702)
chr1 (115-294)||(29651901-29652082)
chr1 (114-294)||(9476350-9476531)
chr1 (85-176)||(9023785-9023876)
chr1 (116-294)||(13598489-13598669)
chr1 (169-294)||(9022734-9022857)
chr1 (143-209)||(32889558-32889624)
chr1 (155-208)||(6628910-6628963)
chr1 (114-171)||(8550883-8550941)
chr1 (85-178)||(37918719-37918810)
chr1 (113-165)||(8871143-8871197)
chr1 (113-172)||(34603589-34603649)
chr1 (253-290)||(928174-928211)
chr1 (113-171)||(37168311-37168370)
chr1 (113-171)||(41360928-41360987)
chr1 (85-162)||(48382441-48382518)
chr1 (225-294)||(3281906-3281976)
chr1 (113-170)||(7482326-7482384)
chr1 (225-294)||(13604450-13604520)
chr1 (225-294)||(37069966-37070036)
[»] chr8 (32 HSPs)
chr8 (54-209)||(9054750-9054905)
chr8 (85-294)||(7493001-7493210)
chr8 (55-292)||(3051150-3051387)
chr8 (114-294)||(5702308-5702491)
chr8 (100-230)||(5990454-5990583)
chr8 (143-294)||(19752222-19752372)
chr8 (83-186)||(8863562-8863664)
chr8 (71-186)||(6813729-6813845)
chr8 (113-292)||(28307649-28307829)
chr8 (100-209)||(34477135-34477241)
chr8 (85-183)||(11772001-11772098)
chr8 (114-294)||(4696436-4696615)
chr8 (143-294)||(26403055-26403208)
chr8 (85-209)||(14601223-14601347)
chr8 (108-207)||(33503755-33503855)
chr8 (114-209)||(42093092-42093188)
chr8 (81-209)||(31513245-31513367)
chr8 (64-294)||(23799404-23799635)
chr8 (71-240)||(6127267-6127437)
chr8 (114-171)||(30291620-30291679)
chr8 (108-193)||(37021020-37021105)
chr8 (114-171)||(40328793-40328851)
chr8 (114-171)||(41364943-41365001)
chr8 (253-295)||(3318745-3318787)
chr8 (114-173)||(11383997-11384057)
chr8 (113-171)||(19491794-19491853)
chr8 (102-147)||(28388061-28388106)
chr8 (85-130)||(33079743-33079788)
chr8 (114-171)||(3303766-3303824)
chr8 (290-326)||(8153629-8153665)
chr8 (225-294)||(19175582-19175652)
chr8 (112-183)||(37043658-37043731)
[»] chr2 (42 HSPs)
chr2 (12-287)||(28770608-28770883)
chr2 (3-294)||(2869520-2869812)
chr2 (71-287)||(18674235-18674452)
chr2 (85-294)||(15903718-15903926)
chr2 (120-294)||(40015020-40015194)
chr2 (108-290)||(3278084-3278266)
chr2 (3-143)||(16388449-16388589)
chr2 (114-294)||(14698837-14699016)
chr2 (54-210)||(27149206-27149362)
chr2 (54-283)||(8040089-8040322)
chr2 (85-209)||(35397572-35397694)
chr2 (143-294)||(34388969-34389120)
chr2 (71-294)||(21629989-21630214)
chr2 (66-181)||(27139843-27139958)
chr2 (54-294)||(13569357-13569598)
chr2 (114-294)||(31056133-31056314)
chr2 (84-189)||(12632605-12632709)
chr2 (85-294)||(10707080-10707289)
chr2 (114-294)||(39483020-39483202)
chr2 (114-294)||(2837855-2838038)
chr2 (76-189)||(5077782-5077896)
chr2 (71-240)||(8390032-8390201)
chr2 (114-294)||(33118225-33118404)
chr2 (85-294)||(33528452-33528658)
chr2 (217-294)||(10445295-10445373)
chr2 (122-209)||(41586464-41586549)
chr2 (85-171)||(20522280-20522367)
chr2 (85-289)||(17865263-17865469)
chr2 (113-171)||(11690515-11690574)
chr2 (113-171)||(42362366-42362425)
chr2 (225-294)||(40739033-40739103)
chr2 (113-173)||(723839-723900)
chr2 (225-289)||(23078304-23078369)
chr2 (114-171)||(10445394-10445452)
chr2 (100-171)||(11151673-11151745)
chr2 (113-171)||(14633921-14633980)
chr2 (113-171)||(24885675-24885734)
chr2 (113-171)||(34139866-34139925)
chr2 (137-193)||(1345470-1345525)
chr2 (114-171)||(14202501-14202559)
chr2 (114-175)||(26353193-26353256)
chr2 (225-294)||(36757590-36757660)
[»] chr4 (34 HSPs)
chr4 (85-294)||(37781922-37782133)
chr4 (54-294)||(39774133-39774373)
chr4 (113-294)||(5112325-5112506)
chr4 (73-287)||(34670499-34670711)
chr4 (85-209)||(18912276-18912400)
chr4 (54-294)||(18377388-18377628)
chr4 (88-208)||(39593791-39593910)
chr4 (85-240)||(1983184-1983337)
chr4 (85-294)||(3777609-3777818)
chr4 (114-294)||(25861861-25862041)
chr4 (71-287)||(873352-873569)
chr4 (54-294)||(16623121-16623361)
chr4 (85-193)||(4956239-4956352)
chr4 (85-180)||(8114680-8114774)
chr4 (85-294)||(10047439-10047650)
chr4 (114-294)||(5269028-5269210)
chr4 (142-294)||(6743243-6743395)
chr4 (114-294)||(42599402-42599581)
chr4 (149-294)||(24333935-24334082)
chr4 (100-207)||(42234286-42234390)
chr4 (97-209)||(36175180-36175290)
chr4 (54-170)||(36315181-36315297)
chr4 (54-170)||(36329390-36329506)
chr4 (100-173)||(5871832-5871906)
chr4 (114-171)||(31474164-31474223)
chr4 (154-294)||(16628700-16628839)
chr4 (253-292)||(52467551-52467590)
chr4 (253-291)||(24969045-24969083)
chr4 (137-171)||(45687303-45687337)
chr4 (113-171)||(379394-379453)
chr4 (71-171)||(3796469-3796570)
chr4 (54-170)||(5396623-5396739)
chr4 (253-294)||(37229919-37229960)
chr4 (260-292)||(6677401-6677433)
[»] scaffold0016 (2 HSPs)
scaffold0016 (81-237)||(102380-102535)
scaffold0016 (290-328)||(114456-114494)
[»] chr7 (30 HSPs)
chr7 (54-294)||(5817098-5817337)
chr7 (3-175)||(28617172-28617344)
chr7 (114-294)||(23402841-23403022)
chr7 (114-294)||(20284177-20284358)
chr7 (114-294)||(3047344-3047523)
chr7 (71-294)||(29159849-29160076)
chr7 (143-293)||(9185003-9185153)
chr7 (143-293)||(9189836-9189986)
chr7 (143-294)||(2580508-2580659)
chr7 (114-290)||(9235414-9235591)
chr7 (114-293)||(33332279-33332458)
chr7 (85-294)||(2647525-2647733)
chr7 (114-171)||(24525992-24526051)
chr7 (112-179)||(761261-761328)
chr7 (85-235)||(4162655-4162805)
chr7 (85-286)||(49091721-49091924)
chr7 (85-240)||(56007-56163)
chr7 (114-294)||(4796496-4796675)
chr7 (114-286)||(35960905-35961078)
chr7 (253-294)||(36146605-36146646)
chr7 (140-209)||(45685658-45685727)
chr7 (85-171)||(46516260-46516347)
chr7 (219-294)||(46516133-46516209)
chr7 (113-171)||(8359412-8359471)
chr7 (114-172)||(23565157-23565217)
chr7 (290-319)||(30843510-30843539)
chr7 (103-165)||(36574601-36574665)
chr7 (113-173)||(41649106-41649166)
chr7 (225-294)||(2479535-2479605)
chr7 (290-326)||(4253794-4253830)
[»] chr6 (23 HSPs)
chr6 (81-293)||(33721387-33721600)
chr6 (81-246)||(30518006-30518169)
chr6 (85-193)||(1115033-1115141)
chr6 (137-293)||(14521785-14521944)
chr6 (115-294)||(24435799-24435978)
chr6 (143-294)||(31936695-31936844)
chr6 (114-228)||(99245-99357)
chr6 (85-289)||(5572076-5572278)
chr6 (114-294)||(31979602-31979781)
chr6 (112-171)||(16569047-16569108)
chr6 (85-240)||(10077051-10077202)
chr6 (85-209)||(31076849-31076978)
chr6 (217-294)||(5017324-5017402)
chr6 (72-294)||(21801170-21801394)
chr6 (101-209)||(33690738-33690846)
chr6 (113-173)||(22424922-22424983)
chr6 (85-171)||(31086423-31086510)
chr6 (102-208)||(31418929-31419035)
chr6 (114-171)||(5017430-5017488)
chr6 (113-171)||(2973034-2973093)
chr6 (113-171)||(28137503-28137562)
chr6 (290-326)||(4045283-4045319)
chr6 (118-171)||(16567210-16567265)
[»] chr5 (26 HSPs)
chr5 (85-240)||(2630291-2630445)
chr5 (113-208)||(33030854-33030949)
chr5 (85-294)||(11181660-11181869)
chr5 (58-209)||(6741885-6742036)
chr5 (100-294)||(7160732-7160925)
chr5 (154-294)||(28832386-28832526)
chr5 (81-285)||(5611198-5611403)
chr5 (71-294)||(10281797-10282023)
chr5 (143-294)||(17003787-17003938)
chr5 (143-294)||(31300423-31300574)
chr5 (71-240)||(3880345-3880514)
chr5 (91-274)||(30899933-30900116)
chr5 (71-207)||(34842649-34842785)
chr5 (114-240)||(42127293-42127419)
chr5 (71-294)||(12084005-12084226)
chr5 (138-183)||(3651613-3651658)
chr5 (153-294)||(24553355-24553496)
chr5 (100-210)||(31336153-31336262)
chr5 (113-173)||(33831692-33831753)
chr5 (85-294)||(19588806-19589014)
chr5 (113-171)||(3075753-3075812)
chr5 (113-171)||(8566041-8566100)
chr5 (224-294)||(11916800-11916871)
chr5 (113-171)||(31182986-31183045)
chr5 (225-294)||(9353160-9353230)
chr5 (134-173)||(19806395-19806432)
[»] chr3 (45 HSPs)
chr3 (54-188)||(4386851-4386985)
chr3 (114-290)||(3328178-3328355)
chr3 (86-189)||(29100220-29100324)
chr3 (81-287)||(5366146-5366355)
chr3 (114-294)||(40592599-40592780)
chr3 (85-240)||(21353622-21353776)
chr3 (85-294)||(36029153-36029362)
chr3 (114-294)||(3323508-3323689)
chr3 (114-294)||(8126719-8126899)
chr3 (81-285)||(21156485-21156690)
chr3 (112-191)||(25517069-25517148)
chr3 (89-191)||(5797204-5797305)
chr3 (85-294)||(35925540-35925747)
chr3 (54-294)||(8370306-8370544)
chr3 (114-294)||(24694983-24695162)
chr3 (85-240)||(40844711-40844864)
chr3 (114-294)||(1417308-1417489)
chr3 (85-280)||(18552716-18552910)
chr3 (114-283)||(25795870-25796038)
chr3 (114-294)||(3715817-3716000)
chr3 (54-294)||(21711252-21711491)
chr3 (114-294)||(26299077-26299257)
chr3 (114-289)||(47923726-47923904)
chr3 (100-183)||(41163174-41163258)
chr3 (85-294)||(1736121-1736332)
chr3 (114-173)||(9666562-9666623)
chr3 (71-294)||(6794532-6794754)
chr3 (113-171)||(22835097-22835156)
chr3 (253-294)||(29196584-29196625)
chr3 (84-209)||(44658396-44658521)
chr3 (142-237)||(25929270-25929365)
chr3 (225-294)||(26928416-26928486)
chr3 (114-171)||(32891117-32891176)
chr3 (103-171)||(44700563-44700632)
chr3 (253-292)||(44700675-44700714)
chr3 (137-171)||(29196507-29196541)
chr3 (114-172)||(32744532-32744590)
chr3 (113-171)||(760861-760920)
chr3 (103-165)||(5433961-5434025)
chr3 (113-171)||(46860488-46860547)
chr3 (113-170)||(9581297-9581355)
chr3 (225-294)||(16264548-16264618)
chr3 (225-294)||(27986273-27986343)
chr3 (153-181)||(37387546-37387574)
chr3 (114-171)||(39153457-39153515)
[»] scaffold0002 (1 HSPs)
scaffold0002 (91-285)||(14748-14943)
[»] scaffold0076 (1 HSPs)
scaffold0076 (85-173)||(15937-16025)
[»] scaffold0036 (1 HSPs)
scaffold0036 (85-294)||(85743-85952)
[»] scaffold0006 (3 HSPs)
scaffold0006 (116-294)||(5774-5954)
scaffold0006 (217-294)||(2685-2763)
scaffold0006 (225-294)||(133107-133177)
[»] scaffold0078 (1 HSPs)
scaffold0078 (115-209)||(23622-23715)
[»] scaffold1444 (1 HSPs)
scaffold1444 (108-179)||(1258-1329)
[»] scaffold0176 (1 HSPs)
scaffold0176 (114-209)||(17352-17446)
[»] scaffold0148 (1 HSPs)
scaffold0148 (219-294)||(10924-11002)
[»] scaffold0129 (1 HSPs)
scaffold0129 (260-292)||(19142-19174)


Alignment Details
Target: chr1 (Bit Score: 146; Significance: 8e-77; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 163 - 348
Target Start/End: Complemental strand, 11031433 - 11031248
Alignment:
Q  163 acccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaactcattacccatggtg 262  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  11031433 acccatttttcaagtcattcacactcacaatgtatcctaagagaaaaacactaaaggaagctttttgatccttccaataatgaactcactacccacggtg 11031334  T
Q  263 tttgcaaatgtttcccaacccaagagaacctcctttgatttcttaagtttctctctcttaaagctcgctcaaaagattgaacatag 348  Q
    ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  11031333 tttacaaatgtttcccaacccaagagaacctcttttgatttctcaagtttctctctcttaaagctcgctcaaaaaattgaacatag 11031248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 11032440 - 11032268
Alignment:
Q  1 gaaaaggaagaaaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataata 100  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11032440 gaaaaggaagaaaacaatacaccaatattgtttacgtagttcg-tccaaaaaggacctacttcggaggatagagcaactatctgatccactatgataata 11032342  T
Q  101 gtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttca 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11032341 gtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacataatttctacccatttttca 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 35109645 - 35109423
Alignment:
Q  12 aaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatagtgatataaag 111  Q
    |||||| ||||| ||||||||| |  |||||||||||||| | ||||| || | |||| |||  |||| |||||||||||||||||| |  |||| |||     
T  35109645 aaacaacacaccgatattgtttactcagtttggtccaaaatg-acctaatctg-aggagagacaagctctctgatccactatgataagatagatacaaat 35109548  T
Q  112 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaat 211  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||  |||||| ||| |||||    
T  35109547 aggttacaagaaattagcttaaaagctcacaaagaacaaaccttaatttctacccaattttcaagtcacacacactcacaatgaatcctacgag-aaaat 35109449  T
Q  212 actataggaagctttttgatccttcc 237  Q
    |||| |||||||||||| ||||||||    
T  35109448 actaaaggaagcttttttatccttcc 35109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 22819518 - 22819700
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagag-aaaaata 212  Q
    ||||||||||||||| ||   | ||||||||||| || || ||||||||| |||||||||||||||| ||||||| ||||  |||||||||| ||||| |    
T  22819518 gttacaagaaattagctttttagctcacaaagaataagacataatttctaaccatttttcaagtcacccacactctcaatgaatcctaagagaaaaaaca 22819617  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||||||||||||||||||||  ||||   | | |||||| ||||||| | ||||||||||||||||||||||||||    
T  22819618 caaaaggaagctttttgatccttccaatggtgaaatgtaactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 22819700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 32737037 - 32736909
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    ||||||| |||||||| |  |||||| ||||||||||||| ||||||| ||||||  ||| |||||||||| |||||||||||||||||||||||||||     
T  32737037 tctgatcaactatgatgaaggtgatacaaagaggttacaaaaaattagcttaaaagttcataaagaacaaaccctaatttctacccatttttcaagtcat 32736938  T
Q  181 tcacactcacaatatatcctaagagaaaa 209  Q
      |||||||||||  ||||||||||||||    
T  32736937 cgacactcacaatgaatcctaagagaaaa 32736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 918515 - 918392
Alignment:
Q  87 ccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagt-cactcaca 185  Q
    |||||||||||| ||||||| |||||  |||||||||||||  ||| |||||||||||||||||| | ||||||||||||||||||||| | |||||| |    
T  918515 ccactatgataagagtgatacaaagatattacaagaaattatcttacaaactcacaaagaacaaaccataatttctacccatttttcaattccactcaaa 918416  T
Q  186 ctcacaatatatcctaagagaaaa 209  Q
    | ||||||  ||||||||||||||    
T  918415 cccacaatgaatcctaagagaaaa 918392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 47102821 - 47102667
Alignment:
Q  142 aaagaacaaaacctaatttcta--cccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaa 239  Q
    |||||||||  |||||||||||  |||||||||||  |||||||||||| ||||  ||||||||| ||||| || | || ||||||||||||||||||||    
T  47102821 aaagaacaagtcctaatttctatacccatttttcatatcactcacactctcaatgaatcctaaga-aaaaacacaaaagaaagctttttgatccttccaa 47102723  T
Q  240 taatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | |||||  |||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  47102722 tgatgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 47102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 47098833 - 47098653
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||| ||  |||| ||||||| ||||  | ||||||| ||||| |    
T  47098833 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttt-cacatcacccacactctcaatgaaacctaaga-aaaaaca 47098736  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  47098735 caaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 47098653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 10997016 - 10997159
Alignment:
Q  83 tgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactc 182  Q
    ||||||||||  |||| ||||||| ||| | ||||||||||||||  ||||||  | ||||| |||||| |||||||||||||||||||||||||||| |    
T  10997016 tgatccacta--ataagagtgatacaaatatgttacaagaaattaacttaaaagataacaaataacaaaccctaatttctacccatttttcaagtcaccc 10997113  T
Q  183 acactcacaatatatcctaagagaaaaatactataggaagcttttt 228  Q
     |||||||  |  ||||||| ||||||| |||| ||||||||||||    
T  10997114 tcactcacgttgaatcctaaaagaaaaacactaaaggaagcttttt 10997159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 287
Target Start/End: Original strand, 8281374 - 8281581
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||||| | ||||| ||| | ||||||||||||||   |||   |||||||||||||||  |||||||||| | ||| || |||||||    
T  8281374 tctgatccactatgataagaatgatacaaatatgttacaagaaattaacataatcgctcacaaagaacaaattctaatttctatcaattatttaagtcac 8281473  T
Q  181 tcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgcaaatgtttccc 278  Q
     | ||||||||||  |||| ||||| |||| |||| |||||| ||||| || |||||  ||||  || |||| |||||| ||||||| |||||| |||||    
T  8281474 ccgcactcacaatgaatccaaagag-aaaacactaaaggaagtttttttattcttcctctaatgagatctcactacccaaggtgtttacaaatggttccc 8281572  T
Q  279 aacccaaga 287  Q
    ||| |||||    
T  8281573 aacacaaga 8281581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 40816822 - 40816642
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||| ||||| |   ||||| ||||||| ||||  ||||||||||||||  |    
T  40816822 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcatttgt---gtcacccacactctcaatgaatcctaagagaaaac-a 40816727  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    | | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  40816726 caaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 40816642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 3019791 - 3019888
Alignment:
Q  86 tccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||||  ||||||  ||||||||| |||||||| | ||| ||||||||||||||||    |||||||||||| |||||||||||||||||    
T  3019791 tccactatgataaacgtgatacgaagaggttataagaaatttgcttacaaactcacaaagaacattttctaatttctaccaatttttcaagtcactca 3019888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 17345525 - 17345432
Alignment:
Q  116 tacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    |||||||||||||  ||| | | |||||||||||||||||||||||||||||||||| ||||||| |||||||  |||  ||| ||||||||||    
T  17345525 tacaagaaattagcataagagcccacaaagaacaaaacctaatttctacccattttttaagtcacccacactcttaatgaatcttaagagaaaa 17345432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 16124553 - 16124342
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    || || ||    
T  16124553 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacataagaacaagacctaatttctacccattttgt--gttaccca 16124456  T
Q  184 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 278  Q
    ||||  |||||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||    
T  16124455 cactttcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccc 16124358  T
Q  279 aacccaagagaacctc 294  Q
    ||||||||||| ||||    
T  16124357 aacccaagagatcctc 16124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 19073017 - 19073199
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcac-aatatatcctaagagaaaaat 211  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||||||||||| | |||  | |||||||| ||||     
T  19073017 gttacaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt--gtgtcactcacactctcaaatgaaccctaagag-aaaac 19073113  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    || | ||||||||||||||||||||||||  ||||  |||| || ||| ||||||| | ||||||||||||||  ||||||||||||    
T  19073114 acaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 19073199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 19120907 - 19121089
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcac-aatatatcctaagagaaaaat 211  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||||||||||| | |||  | |||||||| ||||     
T  19120907 gttacaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt--gtgtcactcacactctcaaatgaaccctaagag-aaaac 19121003  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    || | ||||||||||||||||||||||||  ||||  |||| || ||| ||||||| | ||||||||||||||  ||||||||||||    
T  19121004 acaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 19121089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 294
Target Start/End: Complemental strand, 47704004 - 47703761
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||    |||||||||||||| ||| || || ||| |||||||| |    
T  47704004 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttacaagcttacacaagaacaaga 47703905  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 248  Q
    |||||||||||||||||||    ||||| ||| ||||||||||  |||||||||| |||| || | |||||| ||||| ||| |||||||  ||||  ||    
T  47703904 cctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaagag-aaaacacaaaaggaagtttttttatcattccaatggtgaaatct 47703808  T
Q  249 cattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    || |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  47703807 cactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 47703761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 285
Target Start/End: Complemental strand, 25116702 - 25116537
Alignment:
Q  121 gaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactca-caatatatcctaagagaaaaatactatagg 219  Q
    |||||||| |||||||||||||||||| ||  |||||||| |||||  |||||||||||  ||||||||  |||| ||| |||||| |||| |||| ||     
T  25116702 gaaattagcttaaaaactcacaaagaagaacccctaatttttaccc--ttttcaagtcatccacactcataaataaatcttaagag-aaaacactaaaga 25116606  T
Q  220 aagctttttgatccttccaataatgaa--ctcattaccc-atggtgtttgcaaatgtttcccaacccaa 285  Q
    ||  ||||| ||||||| |||||||||  |||| ||||| |  |||||| |||||||||||||||||||    
T  25116605 aatttttttaatccttcaaataatgaaatctcactaccctaatgtgtttacaaatgtttcccaacccaa 25116537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 294
Target Start/End: Original strand, 29651901 - 29652082
Alignment:
Q  115 ttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaaa 210  Q
    |||||||||||||  ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||||||| |||||    ||||||||||||||     
T  29651901 ttacaagaaattaacttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaaaac 29651998  T
Q  211 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     || | ||||| ||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||| ||| ||||    
T  29651999 -acaaaaggaaactttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaaaagatcctc 29652082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 9476350 - 9476531
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaa 210  Q
    |||| |||||||||| ||| || || ||| |||||||| |||||||||||| |||||||    ||||||||| |||||||| |  ||| ||||||||||     
T  9476350 gttataagaaattagcttacaagcttacacaagaacaagacctaatttctatccattttgt--gtcactcactctcacaatgtgaatcttaagagaaaac 9476447  T
Q  211 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     || | |||||||||||||||||||| |||  ||||  |||| |||||| | ||||| ||| |||||||||||| |||||||||||    
T  9476448 -acaaaaggaagctttttgatccttcaaatggtgaaatctcactacccaagatgtttacaa-tgtttcccaaccaaagagaacctc 9476531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 9023876 - 9023785
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaag 176  Q
    |||||||| ||| | ||||||| |||  || ||||| |||||||  ||||| ||||||||||| || |||||||||||||||| ||||||||    
T  9023876 atccactaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcacaaagaataagacctaatttctacccacttttcaag 9023785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 13598489 - 13598669
Alignment:
Q  116 tacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat-at--atcctaagagaaaaat 211  Q
    ||||||||||||| ||| || || ||| |||||||| || |||||||||| ||||||    ||||| ||||||| |||| ||  ||||||||||||||      
T  13598489 tacaagaaattagcttataagcttacacaagaacaagacttaatttctactcattttgt--gtcacccacactctcaatgatgaatcctaagagaaaac- 13598585  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||| ||||    
T  13598586 acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttgccaacccaagagatcctc 13598669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 9022857 - 9022734
Alignment:
Q  169 ttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttg 266  Q
    |||||||||||  ||||||||||||  |||||||||||||   |||  |||||||||||| |||||||||||  ||||  |||| |||  | |||||||     
T  9022857 ttttcaagtcaaccacactcacaatgaatcctaagagaaa---actcaaggaagcttttttatccttccaatggtgaaatctcactacgaaaggtgttta 9022761  T
Q  267 caaatgtttcccaacccaagagaacctc 294  Q
    | |||||||| |||||||||||||||||    
T  9022760 c-aatgtttctcaacccaagagaacctc 9022734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 32889558 - 32889624
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    ||||||||  ||||||||||||||||||||||  |||| ||||||| ||||  ||||||||||||||    
T  32889558 aagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaa 32889624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 6628910 - 6628963
Alignment:
Q  155 taatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaa 208  Q
    |||||||||| |||||||||||||| ||| | |||||||| |||||||||||||    
T  6628910 taatttctactcatttttcaagtcattcaaagtcacaatagatcctaagagaaa 6628963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 8550883 - 8550941
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  8550883 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 8550941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 37918719 - 37918810
Alignment:
Q  85 atccactatgataata-gtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtc 178  Q
    ||||||||||| |||| |||||| ||||| ||||||||||||||||||  || |||| |||||||    ||||| ||||||| ||||||||||||    
T  37918719 atccactatgaaaataagtgatacaaagatgttacaagaaattagatttcaagctcataaagaac---ccctaaattctacctatttttcaagtc 37918810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 8871143 - 8871197
Alignment:
Q  113 ggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacc 165  Q
    |||||||||||||||| || ||  ||||||||||||||||| |||||||||||||    
T  8871143 ggttacaagaaattagcttcaacgaactcacaaagaacaaaccctaatttctacc 8871197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 34603649 - 34603589
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattttt 172  Q
    |||||||||||||||| ||||| |  ||||||||||||||  ||||||||||||||||||||    
T  34603649 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccattttt 34603589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 928174 - 928211
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaa 290  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  928174 acccaaggtgtttacaaatgtttcccaacccaagagaa 928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 37168370 - 37168311
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  37168370 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttt 37168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 41360987 - 41360928
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  41360987 ggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 41360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 48382518 - 48382441
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttct 162  Q
    ||||| |||||| | ||||||| ||| ||||||||||||||||  ||| ||  ||||||||| |||| ||||||||||    
T  48382518 atccaatatgatgaaagtgatacaaataggttacaagaaattaacttacaagttcacaaagatcaaaccctaatttct 48382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 3281906 - 3281976
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  3281906 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 3281976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 7482326 - 7482384
Alignment:
Q  113 ggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccattt 170  Q
    |||||||||||||||| ||||  || |||||||||||| || ||||||||||||||||||    
T  7482326 ggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattt 7482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 13604520 - 13604450
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  13604520 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 13604450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 37069966 - 37070036
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  ||||||| ||| ||||||| ||| ||||||||||||||||||| ||||    
T  37069966 ttttgatccttccaatggtgaaatctcattatccaaggtgtttacaa-tgtttcccaacccaagagatcctc 37070036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 9054905 - 9054750
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 153  Q
    ||||||||| |||||| ||||||||| ||| |||||||| ||| | ||||||| |||| |||||||||||||||| |||||| | ||||||||||||||     
T  9054905 gacctactctggaggagagagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaattagcttaaaagcgcacaaagaacaaaat 9054806  T
Q  154 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9054805 ctaatttctacccatttttcaagtcactcacactctcaatgaatcctaagagaaaa 9054750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 7493210 - 7493001
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||| ||| | ||||||| ||||| |||| |||||||||   ||||| |||||| ||||||||||||||||||||||  ||||||||||||| |||    
T  7493210 atccactaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcacacagaacaaaacctaatttctacctgtttttcaagtcacccac 7493111  T
Q  185 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc 282  Q
    |||| ||||| ||||||||| ||||| |||| |||||||||||||||||||| |||  ||||  |||| |||||| ||||||| | |||||||||||| |    
T  7493110 actctcaataaatcctaaga-aaaaacactaaaggaagctttttgatccttctaattgtgaaatctcactacccaaggtgtttac-aatgtttcccaatc 7493013  T
Q  283 caagagaacctc 294  Q
    ||||||||||||    
T  7493012 caagagaacctc 7493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 55 - 292
Target Start/End: Original strand, 3051150 - 3051387
Alignment:
Q  55 acctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacc 154  Q
    |||| ||| |||||| |||||| || ||  |||||||| ||| | ||||||| |||   |||||||||||||||  ||| | |||||||||||||||||     
T  3051150 acctcctctggaggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaact 3051249  T
Q  155 taatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcatt 252  Q
    |||||||||||||||||||| |||||| |||||| ||||  |||||||||||||   || | |||||||||||||||| |||||||  ||||  |||| |    
T  3051250 taatttctacccatttttcatgtcacttacactctcaatgaatcctaagagaaagc-acaaaaggaagctttttgatctttccaatggtgaaatctcact 3051348  T
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacc 292  Q
    ||||| | ||||| | ||||||||||||| ||||||||||    
T  3051349 acccaagatgtttac-aatgtttcccaactcaagagaacc 3051387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 5702491 - 5702308
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaa 209  Q
    ||||||||||||||| ||| || || ||| |||| ||||||||||||||||||||||||   |||||| ||||||| |||||    ||||||||||||||    
T  5702491 gttacaagaaattagcttataagcttacacaagagcaaaacctaatttctacccattttg--agtcacccacactctcaataatgaatcctaagagaaaa 5702394  T
Q  210 atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | || | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | ||| ||||||||||||||||| ||||    
T  5702393 acacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatatttcccaacccaagagatcctc 5702308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 5990583 - 5990454
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 199  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||||||||||  |||| ||||  |||||||||||||||||| ||||||  ||||  ||||    
T  5990583 agtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctcattttcacccatttttcaagtcacccacactttcaatgaatcc 5990484  T
Q  200 taagagaaaaatactataggaagctttttga 230  Q
    |||||| |||| |||| || |||||||||||    
T  5990483 taagag-aaaacactaaagaaagctttttga 5990454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 294
Target Start/End: Complemental strand, 19752372 - 19752222
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 242  Q
    ||||||||  ||||||||||||||||||||||  |||| ||||||| ||||  ||||||||||||||  || | |||||||||||||||||||||||| |    
T  19752372 aagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaac-acaa-aggaagctttttgatccttccaatga 19752275  T
Q  243 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||  |||| |||||| ||||||| | ||| |||| |||||||||||||||||    
T  19752274 tgaaatctcactacccaaggtgtttac-aatatttcacaacccaagagaacctc 19752222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 8863664 - 8863562
Alignment:
Q  83 tgatccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcact 181  Q
    ||||||||||||| ||  ||||||| ||||||||||||||||||||  |||||| ||||||  ||||||| | |||||||||||||||||||||||||||    
T  8863664 tgatccactatgagaaagagtgatacaaagaggttacaagaaattaacttaaaagctcaca--gaacaaaccttaatttctacccatttttcaagtcact 8863567  T
Q  182 cacac 186  Q
    |||||    
T  8863566 cacac 8863562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 6813729 - 6813845
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaa-tttctacccatt 169  Q
    ||||||||| ||  ||||| || ||| | ||||| | |||| |||||||||||||||| ||  || ||||||||||||||||||||| ||||||||||||    
T  6813729 agagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacctaattttctacccatt 6813828  T
Q  170 tttcaagtcactcacac 186  Q
    |||||||||||||||||    
T  6813829 tttcaagtcactcacac 6813845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 292
Target Start/End: Original strand, 28307649 - 28307829
Alignment:
Q  113 ggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaat 211  Q
    |||||||||||||||| || |||| |||| ||||||||| ||||| ||||||| ||||| ||||||||| ||||||| || |  ||||||| ||||||      
T  28307649 ggttacaagaaattagttttaaaagctcataaagaacaagacctactttctacacatttctcaagtcacccacactctcactgaatcctaaaagaaaac- 28307747  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacc 292  Q
    || | || ||||||||| |||||||||||  ||||  |||| |||||| ||||||  ||| |||||||||||| |||||||||    
T  28307748 acaaaagaaagcttttttatccttccaattgtgaaatctcactacccaaggtgttaacaa-tgtttcccaacctaagagaacc 28307829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 34477241 - 34477135
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 199  Q
    ||||||| |||||||||| |||||||||  ||| |||||||||||||||||   |||||||| ||||||||||||||||||||| |  ||||||  ||||    
T  34477241 agtgatacaaagaggttaaaagaaattaacttacaaactcacaaagaacaa---ctaatttcgacccatttttcaagtcactcaaatccacaatgaatcc 34477145  T
Q  200 taagagaaaa 209  Q
     |||||||||    
T  34477144 aaagagaaaa 34477135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 11772001 - 11772098
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||||| ||||||| |||||||||| |||||||||| ||| ||  |||||||||||| | |||||| | ||||| ||||||||||||||||    
T  11772001 atccactatgataagagtgatacaaagaggttaaaagaaattagtttacaagttcacaaagaacatatcctaatat-tacccttttttcaagtcactca 11772098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 4696615 - 4696436
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||  |||||||| ||||||||||||||||||||    ||||| ||||||| || |  |||||||||| |||| |    
T  4696615 gttacaagaaattagcttataagcttacgcaagaacaagacctaatttctacccatttt--gtgtcacccacactctcattgaatcctaagag-aaaaca 4696519  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  4696518 caaaaggaagctttttgatctttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 4696436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 294
Target Start/End: Complemental strand, 26403208 - 26403055
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    |||||||| ||||||||||||||||||||    ||||||||| ||||||||||  ||| |||||| |||| || | ||||||||||||||||||||||||    
T  26403208 aagaacaagacctaatttctacccatttt--gtgtcactcactctcacaatatgaatcataagag-aaaacacaaaaggaagctttttgatccttccaat 26403112  T
Q  241 aatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
      ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  26403111 ggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 26403055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 14601223 - 14601347
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    ||||||||  |||||| ||||| |||||||||||| ||||||||  || || | ||||||||||  | |||||||| |||| |||||||||||||||||     
T  14601223 atccactacaataataatgatacaaagaggttacacgaaattagcgtataagcccacaaagaacgtatcctaatttttacctatttttcaagtcactcaa 14601322  T
Q  185 actcacaatatatcctaagagaaaa 209  Q
    || ||| ||  |||||| |||||||    
T  14601323 acgcacgatgaatcctatgagaaaa 14601347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 33503855 - 33503755
Alignment:
Q  108 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcaca-atatatcctaagaga 206  Q
    |||||||||| |||||||||| | | || | | ||||| |||| |||||||||||||||||||||||||||||||| || |||| | | |||||||||||    
T  33503855 aaagaggttaaaagaaattagctcacaagccctcaaagcacaatacctaatttctacccatttttcaagtcactcaaacccacatagagatcctaagaga 33503756  T
Q  207 a 207  Q
    |    
T  33503755 a 33503755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 42093188 - 42093092
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacac-tcacaatatatcctaagagaaaa 209  Q
    ||||||||||||||| ||| |||||||||||||||| | | ||||||||||| ||||||||||| ||| | || |||||||   |||||||||||||    
T  42093188 gttacaagaaattagcttacaaactcacaaagaacatatcataatttctacctatttttcaagttacttagacttcacaatgattcctaagagaaaa 42093092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 31513367 - 31513245
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||||| | | ||  ||||||||||||| ||||||| |||     |||||||||||||| ||||||||||||| ||||| | |||||     
T  31513367 tctgatccactatgataagaattatgaaaagaggttacaaaaaattagcttat----tcacaaagaacaaa-cctaatttctacctatttt-cgagtcat 31513274  T
Q  181 tcacactcacaatatatcctaagagaaaa 209  Q
     ||||||||||||  ||||||||||||||    
T  31513273 ccacactcacaatgaatcctaagagaaaa 31513245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 294
Target Start/End: Complemental strand, 23799635 - 23799404
Alignment:
Q  64 ggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttct 162  Q
    |||||| ||||||||  ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| |||||||||||    
T  23799635 ggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttct 23799536  T
Q  163 acccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccat 258  Q
    |||||||||    ||||| |||  |||||||||  |||||||| | |||| || | ||||||||||||||||||||||||  ||||  |||  ||| ||     
T  23799535 acccatttt--gtgtcacccactgtcacaatatgaatcctaag-ggaaaacacaaaaggaagctttttgatccttccaatggtgaaatctccctactcaa 23799439  T
Q  259 ggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||| | |||||| |||||||||||||| ||||    
T  23799438 ggtgtttac-aatgttccccaacccaagagatcctc 23799404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 240
Target Start/End: Original strand, 6127267 - 6127437
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||    
T  6127267 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatt 6127366  T
Q  170 tttcaagtcactcacactcacaata---tatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||    ||||| ||||||| |||||    |||||||||| |||| || | || |||||||||||||||||||||    
T  6127367 tt--gtgtcacccacactctcaataatgaatcctaagag-aaaacacaaaagaaagctttttgatccttccaat 6127437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 30291679 - 30291620
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| || || |  |||||||||||||||||||||||||||||||||||    
T  30291679 gttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccatttt 30291620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 37021020 - 37021105
Alignment:
Q  108 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat 193  Q
    ||||||| ||||||||||||||| | || ||||| ||||| ||| | |||||||||||  ||| |||||||| ||| |||||||||    
T  37021020 aaagaggatacaagaaattagatcacaatctcacgaagaataaaccataatttctaccattttgtcaagtcagtcaaactcacaat 37021105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 40328851 - 40328793
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  40328851 gttacaagaaattagtttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 41364943 - 41365001
Alignment:
Q  114 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| |||||  |||||||||||||| |||||||||||||||| |||||    
T  41364943 gttacaagaaattagcttaaacaaactcacaaagaac-aaacctaatttctaccaatttt 41365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 3318745 - 3318787
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacctcc 295  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||    
T  3318745 acccaaggtgttttcaaatgtttcctaacccaagagaacctcc 3318787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 11384057 - 11383997
Alignment:
Q  114 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttttc 173  Q
    ||||||||||||||| || ||  ||||||||||||||||  |||||||||||||||||||||    
T  11384057 gttacaagaaattagcttcaacaaactcacaaagaacaac-cctaatttctacccatttttc 11383997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 19491794 - 19491853
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  19491794 ggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 28388061 - 28388106
Alignment:
Q  102 tgatataaagaggttacaagaaattagattaaaaactcacaaagaa 147  Q
    ||||| |||||||||||||||||||||||   ||||||||||||||    
T  28388061 tgatacaaagaggttacaagaaattagatctcaaactcacaaagaa 28388106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 33079743 - 33079788
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagat 130  Q
    ||||||||||| | |||||||| || ||||||||||||||||||||    
T  33079743 atccactatgaaattagtgatacaaggaggttacaagaaattagat 33079788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 3303766 - 3303824
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||||| |  ||||||||||||||| | |||||||||||||||||    
T  3303766 gttacaagaaattaggttaaacaagctcacaaagaacaaa-cttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 8153665 - 8153629
Alignment:
Q  290 acctcctttgatttcttaagtttctctctcttaaagc 326  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  8153665 acctcctttgatttcctaaatttctctctcttaaagc 8153629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 19175652 - 19175582
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||| ||||  |||| |||||| ||||||| ||| |||||||||| |||||||| ||||    
T  19175652 ttttgatccttccaatagtgaaatctcactacccaaggtgtttacaa-tgtttcccaatccaagagatcctc 19175582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 37043658 - 37043731
Alignment:
Q  112 aggttacaagaaattagattaaaaactcacaaagaacaaaacc---taatttctacccatttttcaagtcactca 183  Q
    ||||| |||||||||||||   || ||||||||||||||| ||   |||||| ||||||||||||||||||||||    
T  37043658 aggttgcaagaaattagatctcaagctcacaaagaacaaacccagttaattt-tacccatttttcaagtcactca 37043731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 28770883 - 28770608
Alignment:
Q  12 aaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatagtgatataaag 111  Q
    |||||||||||||||||| ||| | || |  |||| ||||  ||||||||| |||||||||||||||| || ||||| ||| ||||| | ||||| ||||    
T  28770883 aaacaagacaccaatattttttaccta-tacggtctaaaaatgacctactctggaggatagagcagctctccgatcctctacgataagaatgatacaaag 28770785  T
Q  112 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaat 211  Q
    |  |||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||  ||||||| ||||  |||||||||| ||||     
T  28770784 atattacaagaaattagcttaaaagctcacaaagaacaaactctaatttctacccatttttcaagtcatacacactcgcaatgaatcctaagag-aaaac 28770686  T
Q  212 actataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgcaaatgtttcccaacccaaga 287  Q
    |||| ||||| |||||| |||||||   ||||  || |||| |||||| ||||||| ||||||||| |||||| ||||    
T  28770685 actaaaggaaacttttttatccttcagctaatgagatctcactacccaaggtgtttacaaatgttttccaaccaaaga 28770608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 294
Target Start/End: Complemental strand, 2869812 - 2869520
Alignment:
Q  3 aaaggaagaaaacaag-acaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatag 101  Q
    ||||||||| |||||  ||||||||||||||| |  |||| ||||||| | | ||||||||  | ||| |||| |||| ||  |||||||| ||| | ||    
T  2869812 aaaggaagagaacaaacacaccaatattgtttacccagttcggtccaatatg-acctactctaggggagagagtagctctccaatccactaagatgaaag 2869714  T
Q  102 tgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaa-cctaatttctacccatttttcaagtcactcacactcacaatatatcct 200  Q
    ||||| ||||  ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||  |||||    
T  2869713 tgatacaaaggagttacaagaaattagcttaaaagctcacaaagaacaaaaacctaatttctacccatttttcaagtcacccacactctcaatgaatcct 2869614  T
Q  201 aagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||| |||| ||||  |||||||||||||| ||||||||   |||  |||| ||||||  |||||| | ||||||| ||||| ||||||||||||    
T  2869613 aagag-aaaacactaacggaagctttttgattcttccaatggcgaaatctcactacccaatgtgtttac-aatgttttccaactcaagagaacctc 2869520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 287
Target Start/End: Complemental strand, 18674452 - 18674235
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccattt 170  Q
    ||||||||| || |||| ||||||| || |||||||  ||| |||||||||||||||| |||||| ||||||||||||||| | ||||||||| ||||||    
T  18674452 agagcagctctccgatctactatgacaagagtgataccaaggggttacaagaaattagtttaaaagctcacaaagaacaaaccataatttctatccattt 18674353  T
Q  171 ttcaagtcactcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgc 267  Q
    |||||||||| ||||||||  |||  ||| |||||| |||| | || ||||||||||||||||||| ||||||||||  |||| | | || ||||||| |    
T  18674352 ttcaagtcacccacactcataaatgaatcataagag-aaaacattaaaggaagctttttgatcctt-caataatgaaatctcactgctcaaggtgtttac 18674255  T
Q  268 aaatgtttcccaacccaaga 287  Q
     |||||||||||||||||||    
T  18674254 gaatgtttcccaacccaaga 18674235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 15903926 - 15903718
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||| ||||| ||||||| |||| ||||||||||||| || ||| || |||||||||||||||  ||||||||||||||||||||||||||| |||    
T  15903926 atccactaagataaaagtgatacaaaggggttacaagaaat-agcttacaagctcacaaagaacaaattctaatttctacccatttttcaagtcacccac 15903828  T
Q  185 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc 282  Q
    |||| ||||  |||||| |||||||  || | || || |||||| ||| |||||||  ||||  ||||||| |||  |||||| ||| ||||||| ||||    
T  15903827 actctcaatgaatcctatgagaaaac-acaaaagaaatcttttttatcattccaatggtgaaatctcattatccaatgtgtttacaa-tgtttcctaacc 15903730  T
Q  283 caagagaacctc 294  Q
    ||||||||||||    
T  15903729 caagagaacctc 15903718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 294
Target Start/End: Original strand, 40015020 - 40015194
Alignment:
Q  120 agaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactatag 218  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| || ||||| ||||||| ||||| ||||||||| ||||  || | ||    
T  40015020 agaaattagcttaaaaactcacaaaagaacaagacctaatttctactcatttt-catgtcacccacactctcaataaatcctaaga-aaaatcacaaaag 40015117  T
Q  219 gaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||||||||  ||||  |||| || |||  |||||| | ||||||||||||||||||||||||||    
T  40015118 gaagctttttgatccttccaatggtgaaatctcactatccaatgtgtttac-aatgtttcccaacccaagagaacctc 40015194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 108 - 290
Target Start/End: Original strand, 3278084 - 3278266
Alignment:
Q  108 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaa 207  Q
    |||||||||| |||||||||| |||||| ||||||| |||||||  |  |||||| | |||||||||| |||||||||||||||||  | |||||||| |    
T  3278084 aaagaggttataagaaattagcttaaaacctcacaa-gaacaaattccgatttcttctcatttttcaattcactcacactcacaatgaaccctaagag-a 3278181  T
Q  208 aaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaa 290  Q
    |||  ||| |||||| |||||||||| ||| ||||||||  |||| || ||| ||||||| ||||||||| ||||||||||||||    
T  3278182 aaacgctaaaggaagttttttgatccgtcctataatgaaatctcactatccaaggtgtttacaaatgttttccaacccaagagaa 3278266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 16388589 - 16388449
Alignment:
Q  3 aaaggaagaaaacaagacaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatagt 102  Q
    |||||| |||||||| ||||||||||||||| |  ||||||||||||||  |||||||||  ||||| ||||||||| ||   |||||| |||||| ||     
T  16388589 aaaggaggaaaacaacacaccaatattgtttacccagtttggtccaaaaatgacctactctagaggagagagcagctctcctttccactttgataagaga 16388490  T
Q  103 gatataaagaggttacaagaaattagattaaaaactcacaa 143  Q
    |||| ||||||||||||||||||||| |||||| |||||||    
T  16388489 gatagaaagaggttacaagaaattagcttaaaagctcacaa 16388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 14699016 - 14698837
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||||||| ||||  ||||||||||||||  |    
T  14699016 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaac-a 14698920  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||||||||||||||||||||| ||||  |||| |||||| ||||||| | ||||||||||||||| ||||| ||||    
T  14698919 caaaaggaagctttttgatccttccaatagtgaaatctcactacccaaggtgtttac-aatgtttcccaacccgagagatcctc 14698837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 27149362 - 27149206
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 153  Q
    ||||||||  || ||| ||||||||| ||  ||||||||| || | ||||||| |||| ||| |||||||||||  |||||| |||||||||||||| ||    
T  27149362 gacctactatgggggagagagcagctctccaatccactataatgaaagtgatacaaaggggtaacaagaaattaccttaaaagctcacaaagaacaagac 27149263  T
Q  154 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaa 210  Q
     ||| |||||||  ||||| ||||||| ||||||||||||  |||||||||||||||    
T  27149262 ttaacttctacctgttttttaagtcacccacactcacaatgaatcctaagagaaaaa 27149206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 283
Target Start/End: Original strand, 8040089 - 8040322
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaa-gag-gttacaagaaattagattaaaaactcaca-aagaacaa 150  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || ||| ||| ||||||||||||||| ||| || || ||| ||||||||    
T  8040089 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagcttacaagcttacacaagaacaa 8040188  T
Q  151 aacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa-- 246  Q
     ||||||||||||||||||||    ||||| ||| ||||||||||  ||||||||||||||| |  | ||||||||||||||||||||||||  ||||      
T  8040189 gacctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaagagaaaaacataaaaggaagctttttgatccttccaatggtgaaat 8040286  T
Q  247 ctcattacccatggtgtttgcaaatgtttcccaaccc 283  Q
    |||| |||||| ||||||| | |||||||||||||||    
T  8040287 ctcactacccaaggtgtttac-aatgtttcccaaccc 8040322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 35397572 - 35397694
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||| ||| | ||||||||||||||||||| | ||||||| ||||||  ||| |||||||||| ||||||||||| |||||||||||||||| |||    
T  35397572 atccactaagatgaaagtgatataaagaggttacga-aaattagcttaaaaggtcataaagaacaaa-cctaatttctatccatttttcaagtcacccac 35397669  T
Q  185 actcacaatatatcctaagagaaaa 209  Q
    | || ||||  ||||||||||||||    
T  35397670 aatctcaatgaatcctaagagaaaa 35397694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 34388969 - 34389120
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    |||||||| ||||||||||||||||||||    ||||| ||| ||||||||||  |||||||||| |||| || | ||||||||||||||||||||||||    
T  34388969 aagaacaagacctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaat 34389065  T
Q  241 aatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
      ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  34389066 ggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 34389120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 294
Target Start/End: Original strand, 21629989 - 21630214
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| || |||||||||||||||    
T  21629989 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttataagcttacacaagaacaagacttaatttctacccatt 21630088  T
Q  170 tttcaagtcactcacactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtt 264  Q
    ||    ||||| ||||||| |||||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||    
T  21630089 ttgt--gtcacccacactctcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtt 21630185  T
Q  265 tgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||||||||||||||||| ||||    
T  21630186 tac-aatgtttcccaacccaagagatcctc 21630214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 27139843 - 27139958
Alignment:
Q  66 aggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacc 165  Q
    |||| ||||||||| ||  || |||||||| |||||||||| ||| | |||||| ||||||| ||| ||| ||||||||| ||||| ||||||||||||     
T  27139843 aggagagagcagctctccaattcactatgaaaatagtgatacaaaaatgttacaggaaattaaatttaaagctcacaaagtacaaaccctaatttctaca 27139942  T
Q  166 catttttcaagtcact 181  Q
    ||| ||||||||||||    
T  27139943 catatttcaagtcact 27139958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 294
Target Start/End: Original strand, 13569357 - 13569598
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| ||  | ||| |||||||| |    
T  13569357 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagtttacacaagaacaaga 13569456  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 248  Q
    |||||||||||||| || ||   ||||| ||| ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||  ||||  ||    
T  13569457 cctaatttctaccctttgttt--gtcacccactctcacaatatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatct 13569553  T
Q  249 cattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    || || ||| |||||||   ||||||||||||||||||||| ||||    
T  13569554 cactatccaaggtgttt-ataatgtttcccaacccaagagatcctc 13569598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 31056133 - 31056314
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||| ||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| ||||||| ||||  |||||||||| |||| |    
T  31056133 gttacaataaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaatgaatcctaagag-aaaaca 31056229  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    | | ||||||||||||||||||| ||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  31056230 caaaaggaagctttttgatcctttcaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 31056314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 12632605 - 12632709
Alignment:
Q  84 gatccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactc 182  Q
    |||||||||||||||  |||| || |||||||||| |||||||||| ||| |  ||||| ||||||||| ||||| ||||| |||||||||||||||| |    
T  12632605 gatccactatgataaagagtggtacaaagaggttaaaagaaattagtttaga--ctcaccaagaacaaaccctaacttctatccatttttcaagtcaccc 12632702  T
Q  183 acactca 189  Q
    |||||||    
T  12632703 acactca 12632709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 10707289 - 10707080
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||| | |   ||||| ||    
T  10707289 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatctgt---gtcaccca 10707193  T
Q  184 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 279  Q
    | ||||||||||  |||||||||| |||| || | |||||||||||||||||||| |||  ||||  || | |||||| ||||||| | |||||||| ||    
T  10707192 ctctcacaatatgaatcctaagag-aaaacacaaaaggaagctttttgatccttctaatggtgaaatctaactacccaaggtgtttac-aatgtttctca 10707095  T
Q  280 acccaagagaacctc 294  Q
    |||||||||| ||||    
T  10707094 acccaagagatcctc 10707080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 39483020 - 39483202
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaata---tatcctaagagaaaa 209  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||  | ||||| ||||||| |||||    |||||||||| |||    
T  39483020 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--atgtcacccacactctcaataatgaatcctaagag-aaa 39483116  T
Q  210 atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | || | |||||| ||||||||| |||||||  ||||  |||| |||||| ||||||| | ||| ||||||||||||||||| ||||    
T  39483117 acacaaaaggaagttttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatatttcccaacccaagagatcctc 39483202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 2838038 - 2837855
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 213  Q
    |||||||||||||||   || | ||||||||||||| |||||||||| | ||||||||||| ||||| |||  || ||||  |||||||||| |||| ||    
T  2838038 gttacaagaaattagtacaagagctcacaaagaacacaacctaatttttgcccatttttcatgtcacccaccttctcaatgaatcctaagag-aaaacac 2837940  T
Q  214 tataggaagctttttgatccttccaataatgaa---ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    || |||||  ||||| |||||||||||  ||||   |||| || ||| ||||||| | ||||||||||||||  ||||||||||||    
T  2837939 taaaggaatattttttatccttccaatggtgaaattctcactatccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 2837855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 5077782 - 5077896
Alignment:
Q  76 agctatctgatccactatgataatagtgatataaagaggttacaagaaattagat-taaaaactcacaaagaacaaaacctaatttctacccatttttca 174  Q
    |||||||  |||||||||||||| ||||||| |||| ||||||||||||||| || | ||| || |||||||||||| |  |||||||||  |||| | |    
T  5077782 agctatccaatccactatgataagagtgatacaaagtggttacaagaaattatatcttaaagcttacaaagaacaaatctgaatttctacttatttatta 5077881  T
Q  175 agtcactcacactca 189  Q
    ||||||||| |||||    
T  5077882 agtcactcagactca 5077896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 240
Target Start/End: Complemental strand, 8390201 - 8390032
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || ||  || |||||||| ||||||||||||||||||    
T  8390201 agagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacccatt 8390102  T
Q  170 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||    ||||| ||| ||||||||||  |||||||||| |||| || | ||||||||||||||| ||||||||    
T  8390101 tt--gtgtcacccactctcacaatatgaatcctaagag-aaaacacaagaggaagctttttgattcttccaat 8390032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 33118225 - 33118404
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||| |||||||| || |||||||||||||||||    ||||| | ||||| ||||  ||| ||||||||||  |    
T  33118225 gttacaagaaattagcttataagcttacacaagaacaagacttaatttctacccattttgt--gtcaccctcactctcaatgaatcttaagagaaaac-a 33118321  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||||||||||||||||||||   |||  |||| |||||| ||||||| | |||||| |||||||||||||| ||||    
T  33118322 caaaaggaagctttttgatccttccaatggcgaaatctcactacccaaggtgtttac-aatgttccccaacccaagagatcctc 33118404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 33528658 - 33528452
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || ||    |||||||| ||||||||||||||||||||    ||||| ||     
T  33528658 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct----aagaacaagacctaatttctacccattttgt--gtcacccaa 33528565  T
Q  185 actcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 279  Q
    |||| |||||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| ||||||  |||||| | |||||||||||    
T  33528564 actctcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaatgtgtttac-aatgtttccca 33528467  T
Q  280 acccaagagaacctc 294  Q
    |||||||||| ||||    
T  33528466 acccaagagatcctc 33528452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 10445373 - 10445295
Alignment:
Q  217 aggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||| ||||||||||    
T  10445373 aggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccgagagaacctc 10445295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 41586549 - 41586464
Alignment:
Q  122 aaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    ||||||| |||||| | |||||||||||||   ||||||||||| |||||||||||||||  |||||| |||  ||||||||||||||    
T  41586549 aaattagtttaaaagcacacaaagaacaaactttaatttctacctatttttcaagtcact--cactcagaatggatcctaagagaaaa 41586464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 20522280 - 20522367
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcac-aaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||| | |||| || |||  |||||||||||||||||||| || || || ||||||||| || |||||||||||||||||    
T  20522280 atccactatgatgaaagtgttacaaaagggttacaagaaattagattataagcttacaaaagaacaagacttaatttctacccatttt 20522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 289
Target Start/End: Original strand, 17865263 - 17865469
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| || ||||||||||| |||||  | ||||  ||    
T  17865263 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacataatttctacctatttt--atgtcatcca 17865360  T
Q  184 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 278  Q
    ||||| |||||    ||||||||||||||  || | |||||||||||||||||||| | |  ||||  |||| |||||| ||||||| ||| ||||||||    
T  17865361 cactctcaataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttctatttgtgaaatctcactacccaaggtgtttacaa-tgtttccc 17865458  T
Q  279 aacccaagaga 289  Q
    |||||||||||    
T  17865459 aacccaagaga 17865469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 11690574 - 11690515
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  11690574 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 11690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 42362425 - 42362366
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  42362425 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 42362366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 40739033 - 40739103
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  40739033 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 40739103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 723839 - 723900
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 173  Q
    |||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||||| |||||    
T  723839 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccagttttc 723900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 23078369 - 23078304
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagaga 289  Q
    |||||||||||||||| |||||  |||| |||||| ||||||| ||| |||||||||||||||||||    
T  23078369 ttttgatccttccaatgatgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagaga 23078304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 10445452 - 10445394
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    
T  10445452 gttacaagaaattagcttacaatcttacacaagaacaagacctaatttctacccatttt 10445394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 11151673 - 11151745
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||| |||  |||||||||||||||| ||||  || |||||||||||| ||| ||||||||||||||||||    
T  11151673 agtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaatctaatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 14633921 - 14633980
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  14633921 ggttacaagaaattagcttaaacaagctcacaaagaacaat-cctaatttctacccatttt 14633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 24885734 - 24885675
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||| ||||||    
T  24885734 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctactcatttt 24885675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 34139866 - 34139925
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  34139866 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttt 34139925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 1345525 - 1345470
Alignment:
Q  137 ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat 193  Q
    |||||||| |||| |||||||||||||||||||||||| ||||| | ||||| ||||    
T  1345525 ctcacaaa-aacacaacctaatttctacccatttttcatgtcacccccactctcaat 1345470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 14202501 - 14202559
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||||| |  ||||||||||||||| | |||||||||||||||||    
T  14202501 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 26353256 - 26353193
Alignment:
Q  114 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttttcaa 175  Q
    ||||||||||||||| || ||  ||||||||||||||||| | |||||||||| | ||||||||    
T  26353256 gttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttctacacttttttcaa 26353193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 36757660 - 36757590
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  36757660 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 36757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 37781922 - 37782133
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||  ||    
T  37781922 atccactataataaaagtgatacaaagaggttacaagaaattagcttaaaaactcacaaagaacaaatcttaatttctacccatttttcaagtcacctac 37782021  T
Q  185 actc-acaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 281  Q
    ||||   |||  ||| |||||| |||| |||| | ||  ||||||||| ||||||||||||||  |||| |||||| ||||||| ||||||||| |||||    
T  37782022 actcgtaaatgaatcttaagag-aaaacactaaaagagactttttgattcttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaac 37782120  T
Q  282 ccaagagaacctc 294  Q
    |||||||| ||||    
T  37782121 ccaagagagcctc 37782133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 54 - 294
Target Start/End: Complemental strand, 39774373 - 39774133
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaag-aacaaaa 152  Q
    ||||||||| || ||||||||||||| ||  ||||||||  || | ||||||| ||| ||||||||||||||||| |||||| ||||||||| ||||| |    
T  39774373 gacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaataggttacaagaaattagcttaaaagctcacaaagaaacaaga 39774274  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatg--aactca 250  Q
    ||||||||||| ||| |||||| ||||||||||||| ||||  |||| ||||| ||||||| | |||||||||||||||| |||||||  ||  ||||||    
T  39774273 cctaatttcta-ccaattttcatgtcactcacactctcaatgaatcccaagag-aaaatacaaaaggaagctttttgatcattccaatggtgaaaactca 39774176  T
Q  251 ttacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     |||||| ||||||| | ||||||||||||| ||||||||||||    
T  39774175 ctacccaaggtgtttac-aatgtttcccaactcaagagaacctc 39774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 294
Target Start/End: Original strand, 5112325 - 5112506
Alignment:
Q  113 ggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa-at 211  Q
    |||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||| |||||| ||||||||||||||||||||  |||||||||||||| ||    
T  5112325 ggttacaagaaattagcttaaaaactcataaaaaacgagacctaatttgtacctattttttaagtcactcacactcacaatgaatcctaagagaaaacat 5112424  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    |  | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  5112425 a--aaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 5112506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 73 - 287
Target Start/End: Complemental strand, 34670711 - 34670499
Alignment:
Q  73 agcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccattttt 172  Q
    ||||||| ||||||||||||||||||  ||   | ||||||||||||||||||||| |||| | ||||||||||||||| | ||||||||| ||||||||    
T  34670711 agcagctctctgatccactatgataagggt---acaaagaggttacaagaaattagcttaatagctcacaaagaacaaatcataatttctatccattttt 34670615  T
Q  173 caagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgcaaa 270  Q
    |||||||||||||||||||||  |||||||||| |||| |||| || || ||||| |||||||||  ||||  || |||| |||||| | || || ||||    
T  34670614 caagtcactcacactcacaatgaatcctaagag-aaaacactaaagaaaacttttagatccttcctctaatgagatctcactacccaagatgcttacaaa 34670516  T
Q  271 tgtttcccaacccaaga 287  Q
    |||||| |||| |||||    
T  34670515 tgtttctcaactcaaga 34670499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 18912400 - 18912276
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||||||||| ||||||| ||| ||| ||||||||||||| ||| |||||||||||||||||| ||||| || || |||||||||||||||||||     
T  18912400 atccactatgataagagtgatacaaaaaggatacaagaaattagtttacaaactcacaaagaacaaaccctaaattatatccatttttcaagtcactcaa 18912301  T
Q  185 actcacaatatatcctaagagaaaa 209  Q
    || ||||||  ||||||||||||||    
T  18912300 acccacaatgaatcctaagagaaaa 18912276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 294
Target Start/End: Original strand, 18377388 - 18377628
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaag-aacaaaa 152  Q
    ||||||||| |||||| ||||||||  ||   ||||||| ||| | ||||||| |||  ||||| ||||||| || |||||| ||||||||| |||||      
T  18377388 gacctactctggaggagagagcagccctccattccactaagatgaaagtgatacaaatgggttataagaaatcagcttaaaagctcacaaagaaacaagc 18377487  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctca 250  Q
    ||||||||||||||| |||||| ||||| |||||| |||||  ||||||||| ||||| || | | ||||||||||||||||||||||  | ||  ||||    
T  18377488 cctaatttctaccca-ttttcatgtcacccacacttacaatgaatcctaaga-aaaaacacaaaatgaagctttttgatccttccaatggtaaaatctca 18377585  T
Q  251 ttacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||| || |||| | ||||||| ||| ||||||||||||||    
T  18377586 ttacccaaggggtttac-aatgttttccatcccaagagaacctc 18377628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 39593791 - 39593910
Alignment:
Q  88 cactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacact 187  Q
    ||||||||||| ||||||| ||| | ||||||||||||||| ||| ||||||||||||||   |||||||||||||||| ||| |||||||||||| ||     
T  39593791 cactatgataagagtgatacaaataagttacaagaaattagtttacaaactcacaaagaa-tcaacctaatttctacccctttgtcaagtcactcaaacc 39593889  T
Q  188 cacaatatatcctaagagaaa 208  Q
    ||||||  |||||||||||||    
T  39593890 cacaatgaatcctaagagaaa 39593910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 85 - 240
Target Start/End: Complemental strand, 1983337 - 1983184
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||| ||| | ||||||| |||| |||||||||||||||| ||  || ||||||||||||||||| ||||||||| || |||||||||||||  ||    
T  1983337 atccactaggatcaaagtgatacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacataatttctatcc-tttttcaagtcacctac 1983239  T
Q  185 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    |||| ||||  ||||||||||||||   | | |||||||||||| |||||||||||    
T  1983238 actctcaatgaatcctaagagaaaacc-caaaaggaagcttttttatccttccaat 1983184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 3777609 - 3777818
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||||| |||||||||| ||| ||  ||||| ||| |||||||| | ||||||||||||||||||    ||||| ||    
T  3777609 atccactatgatgaaagtgttacaaagag-ttacaagaaaatagcttgcaaacttacacaagaacaagatctaatttctacccattttgt--gtcaccca 3777705  T
Q  184 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 279  Q
    | ||||||||||  |||||||||||||| ||| | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | |||||||||||    
T  3777706 ctctcacaatatgaatcctaagagaaaa-tacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatgtttccca 3777803  T
Q  280 acccaagagaacctc 294  Q
    |||||||||| ||||    
T  3777804 acccaagagatcctc 3777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 25862041 - 25861861
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||| |||||||| |||||||| |||||||||||    ||||| ||||||| ||||  ||||||||||||||| |    
T  25862041 gttacaagaaattagcttataagcttacacaagaacaagacctaattcctacccattttgt--gtcacccacactctcaatgaatcctaagagaaaaaca 25861944  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | |||||| |||||||||||||||||  ||||  |||| ||| || ||||||| | ||||||||||||||||||||| ||||    
T  25861943 caaaaggaagttttttgatccttccaatggtgaaatctcactactcaaggtgtttac-aatgtttcccaacccaagagatcctc 25861861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 71 - 287
Target Start/End: Complemental strand, 873569 - 873352
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccattt 170  Q
    |||||| || || ||||||||||||| | | |||||  || ||||||||||||||||  |||||| ||| |||| |||||| |||||||||||| ||| |    
T  873569 agagcaactctccgatccactatgattagaatgataccaataggttacaagaaattaacttaaaagctcgcaaataacaaatcctaatttctactcatat 873470  T
Q  171 ttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataat--gaactcattacccatggtgtttgca 268  Q
    ||| |||||| |||| ||||| ||  || |||||| |||| || | | |||||||||||||||| ||  ||||  || |||| ||| || ||||||| ||    
T  873469 ttcgagtcacccacagtcacattaagtcttaagag-aaaacacaaaatgaagctttttgatcctccctctaatgagatctcactactcaaggtgtttaca 873371  T
Q  269 aatgtttcccaacccaaga 287  Q
    |||||| ||||||||||||    
T  873370 aatgttccccaacccaaga 873352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 54 - 294
Target Start/End: Complemental strand, 16623361 - 16623121
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || |||||| ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| | | || || ||| |||||||| |    
T  16623361 gacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctaataagcttacagaagaacaaga 16623262  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 248  Q
    |||||||||||||||||||    ||||| ||| ||||||||||  ||||||| || |||| || | ||||||| ||||||||||||||||  ||||  ||    
T  16623261 cctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaaaag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatct 16623166  T
Q  249 cattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    || |||||| ||||||| | ||||||||||||||||||||| ||||    
T  16623165 cactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 16623121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 4956239 - 4956352
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacc------taatttctacccatttttcaagtc 178  Q
    |||||||||||||| | ||||| ||||||||||||||||||||| | ||||||||| |||||||||| ||      |||||||||||||  |||||||||    
T  4956239 atccactatgataagaatgataaaaagaggttacaagaaattagctaaaaaactcataaagaacaaaccctaattataatttctaccca-atttcaagtc 4956337  T
Q  179 actcacactcacaat 193  Q
    || ||||||||||||    
T  4956338 acccacactcacaat 4956352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 8114774 - 8114680
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||| | ||||||||| |||||||||||||| |  ||| || ||||||||||||||| |||||||| || ||||||||||||||||    
T  8114774 atccactatgataagaatgatataaataggttacaagaaatcac-ttataatctcacaaagaacaaaccctaatttgtatccatttttcaagtcac 8114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 10047439 - 10047650
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  10047439 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattttgt--gtcaccca 10047536  T
Q  184 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 278  Q
    ||||| |||||    ||||||||| ||||  || | |||||| |||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||    
T  10047537 cactctcaataatgaatcctaagacaaaac-acaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttccc 10047634  T
Q  279 aacccaagagaacctc 294  Q
    ||||||||||| ||||    
T  10047635 aacccaagagatcctc 10047650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 5269210 - 5269028
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaa 209  Q
    ||||||||||||||| ||| || || ||| |||||||| |||||||||||||||||| |    ||||| ||||||| |||||    ||||||||||||||    
T  5269210 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccattgtgt--gtcacccacactctcaataatgaatcctaagagaaaa 5269113  T
Q  210 atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
      || | ||||||||||||||||||||||||  ||||  |||| || ||| ||||||| | ||||||||||||||||||||| ||||    
T  5269112 c-acaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttac-aatgtttcccaacccaagagatcctc 5269028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 6743395 - 6743243
Alignment:
Q  142 aaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttcca 238  Q
    ||||||||| ||||||||||||||||||||    ||||| ||||||| |||||    ||||||||||||||  || | |||||| |||||||||||||||    
T  6743395 aaagaacaagacctaatttctacccattttgt--gtcacccacactctcaataatgaatcctaagagaaaac-acaaaaggaag-tttttgatccttcca 6743300  T
Q  239 ataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  6743299 atggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 6743243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 42599581 - 42599402
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| | ||||| ||||  |||||||||| |||| |    
T  42599581 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccgcactctcaatgaatcctaagag-aaaaca 42599485  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | |||||| ||||| |||||||||||  ||||  |||| |||||| |||||||   |||||||||||||| |||||||||||    
T  42599484 caaaaggaagtttttttatccttccaatggtgaaatctcactacccaaggtgttt-agaatgtttcccaaccgaagagaacctc 42599402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 294
Target Start/End: Original strand, 24333935 - 24334082
Alignment:
Q  149 aaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa 246  Q
    |||||||||||||||||||||||    ||||  ||| ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||  ||||    
T  24333935 aaaacctaatttctacccattttgt--gtcagccactctcacaatatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaa 24334031  T
Q  247 --ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
      |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  24334032 atctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 24334082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 42234390 - 42234286
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 199  Q
    |||||||||||||||||||||||||||||||   ||  ||||||||||| ||  ||||||||||| ||||||| |||| |||||  | ||||  ||||||    
T  42234390 agtgatataaagaggttacaagaaattagatctcaagttcacaaagaac-aactctaatttctactcattttttaagttactcaatcccaca--atatcc 42234294  T
Q  200 taagagaa 207  Q
    ||||||||    
T  42234293 taagagaa 42234286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 36175180 - 36175290
Alignment:
Q  97 aatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatata 196  Q
    |||| ||||| ||||||||| ||||||||||| |||||| |||| | |  || ||  ||||||||||||||||||  ||||||  ||||||||||||  |    
T  36175180 aataatgatacaaagaggtttcaagaaattagcttaaaagctcatacatgacgaactctaatttctacccattttctaagtca--cacactcacaatgaa 36175277  T
Q  197 tcctaagagaaaa 209  Q
    ||||| |||||||    
T  36175278 tcctatgagaaaa 36175290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 36315297 - 36315181
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| ||| || || ||| |||| ||| |    
T  36315297 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttagaagcttacacaagagcaaga 36315199  T
Q  153 cctaatttctacccattt 170  Q
    ||||||||||||||||||    
T  36315198 cctaatttctacccattt 36315181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 36329506 - 36329390
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| ||| || || ||| |||| ||| |    
T  36329506 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttagaagcttacacaagagcaaga 36329408  T
Q  153 cctaatttctacccattt 170  Q
    ||||||||||||||||||    
T  36329407 cctaatttctacccattt 36329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 5871906 - 5871832
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 173  Q
    ||||||| |||  |||||||||||||| | ||||| |  ||||||||||||||| |||||||||||||||||||||    
T  5871906 agtgataaaaatgggttacaagaaatttgcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttc 5871832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 31474223 - 31474164
Alignment:
Q  114 gttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| || ||  |||||| ||||||||| ||||||||||||||||||||    
T  31474223 gttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttctacccatttt 31474164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 16628839 - 16628700
Alignment:
Q  154 ctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctc 249  Q
    ||||||||||||||||||    ||||| ||| ||||||||||  ||||||| ||||||  || | ||||||||||| ||||||||||||  ||||  |||    
T  16628839 ctaatttctacccattttgt--gtcacccactctcacaatatgaatcctaaaagaaaac-acaaaaggaagctttt-gatccttccaatggtgaaatctc 16628744  T
Q  250 attacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  16628743 actacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 16628700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 52467551 - 52467590
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacc 292  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  52467551 acccaaggtgtttacaaatgtttcccaacccaagagaacc 52467590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 24969083 - 24969045
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaac 291  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  24969083 acccaaggtgtttacaaatgtttcccaacccaagagaac 24969045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 45687303 - 45687337
Alignment:
Q  137 ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||||||||||||| ||||||||    
T  45687303 ctcacaaagaacaaaacctaatttcttcccatttt 45687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 379453 - 379394
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  379453 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 379394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 3796570 - 3796469
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    |||||| || ||| |||||||||||| | |||| || |||   ||||||||||||||| ||| || ||  || |||||||| ||||||||||||||||||    
T  3796570 agagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttgcacaagaacaagacctaatttctacccatt 3796471  T
Q  170 tt 171  Q
    ||    
T  3796470 tt 3796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 5396739 - 5396623
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || |||||| ||||||||| ||  |||||||||||| | |||| |  |||||| |||||||||| ||| ||  || || ||| |||||||| |    
T  5396739 gacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagag-ttacaagaaaatagcttgcaagcttacacaagaacaaga 5396641  T
Q  153 cctaatttctacccattt 170  Q
    ||||||||||||||||||    
T  5396640 cctaatttctacccattt 5396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 37229919 - 37229960
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||    
T  37229919 acccaaggtgtttacaaatgttttccaacccaagagaacctc 37229960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 6677433 - 6677401
Alignment:
Q  260 gtgtttgcaaatgtttcccaacccaagagaacc 292  Q
    |||||| ||||||||||||||||||||||||||    
T  6677433 gtgtttacaaatgtttcccaacccaagagaacc 6677401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 81 - 237
Target Start/End: Complemental strand, 102535 - 102380
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  102535 tctgatccacaatgataagagtgatacaaagaggttacaagaaattatcttaaaagctcacaaaaaacaaaccctaatttctacccatttttcaagtcac 102436  T
Q  181 tcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttcc 237  Q
     |||||||| |||| || | ||||| |||| |||| |||| ||||||||||||||||    
T  102435 acacactcataataaattcgaagag-aaaacactaaaggatgctttttgatccttcc 102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 114494 - 114456
Alignment:
Q  290 acctcctttgatttcttaagtttctctctcttaaagctc 328  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  114494 acctcctttgatttctcaagtttctctctcttcaagctc 114456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 294
Target Start/End: Complemental strand, 5817337 - 5817098
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 153  Q
    ||||||||| || ||| ||||||||| ||  ||||||||  || | ||||||| |||| |||||||||||||| |  ||| | |||||||||||||||||    
T  5817337 gacctactctgg-ggagagagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaatttgcataagagctcacaaagaacaaaac 5817239  T
Q  154 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcat 251  Q
    |||||||||| |||||||||||||||||||||||| ||||  ||||||||| ||||| || | ||||||||||||||||||||||||  ||||  ||||     
T  5817238 ctaatttctatccatttttcaagtcactcacactctcaatgaatcctaaga-aaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcac 5817140  T
Q  252 tacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | |||| ||| ||| | |||||||||||||| || ||||||||    
T  5817139 tccccaaggtatttac-aatgtttcccaaccaaatagaacctc 5817098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 175
Target Start/End: Complemental strand, 28617344 - 28617172
Alignment:
Q  3 aaaggaagaaaacaag-acaccaatattgtttgcgtagtttggtccaaaagggacctactccggaggatagagcagctatctgatccactatgataatag 101  Q
    |||||||||||||||  ||||||||||||||| |  |||| ||||||| | | |||||||| || ||| ||||||||| ||  |||||||| ||| | ||    
T  28617344 aaaggaagaaaacaaacacaccaatattgtttacccagttcggtccaatatg-acctactctgggggagagagcagctctccaatccactaagatgaaag 28617246  T
Q  102 tgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaa 175  Q
    ||||| || | |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  28617245 tgatacaatggggttacaagaaattagcttaaaagctcacaaagaacaaaacctaatttctacctatttttcaa 28617172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 23403022 - 23402841
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||||||  |||||||||||| ||||  |||||||||| |||| |    
T  23403022 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcacatcactcacactctcaatgaatcctaagag-aaaaca 23402924  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  23402923 caaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 23402841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 20284177 - 20284358
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  |||||||||||||| |||||||  |||| ||||||| ||||  |||||||||| |||| |    
T  20284177 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccttttttcatatcacccacactctcaatgaatcctaagag-aaaaca 20284275  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  20284276 caaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagaacctc 20284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 3047344 - 3047523
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 213  Q
    |||||||||||| |  |||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||  ||| |||||  |||| ||    
T  3047344 gttacaagaaatcaacttaaaagctcacaaagaacaagacctaatttctacccattttt-aagtcacccacactctcaatgaatcttaaga-taaaacac 3047441  T
Q  214 tataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     | |||||||||||||||||||||||| |||||  |||| |||||| | || ||   | ||||||||||||||||||||||||    
T  3047442 aaaaggaagctttttgatccttccaatgatgaaatctcactacccaagatgatt-atagtgtttcccaacccaagagaacctc 3047523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 294
Target Start/End: Original strand, 29159849 - 29160076
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||    
T  29159849 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatt 29159948  T
Q  170 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgttt 265  Q
    |||   ||||| ||| ||||||||||  |||||||||| |||| || | ||||||||||||||||||||||||  ||||  |||| |||||| |||||||    
T  29159949 ttt-gtgtcacccactctcacaatatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgttt 29160046  T
Q  266 gcaaatgtttcccaacc--caagagaacctc 294  Q
     | ||||||||||||||  ||||||||||||    
T  29160047 ac-aatgtttcccaaccctcaagagaacctc 29160076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 293
Target Start/End: Complemental strand, 9185153 - 9185003
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 242  Q
    ||||||||  ||||||||||||||||||||||  |||| |||||||  |||  ||||||||||||||  ||   ||||||||||||||||||||||||      
T  9185153 aagaacaagtcctaatttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaac-acacaaggaagctttttgatccttccaatgg 9185055  T
Q  243 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacct 293  Q
    ||||  |||| |||||| ||||||| ||| |||||||||||||||||||||||    
T  9185054 tgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacct 9185003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 293
Target Start/End: Complemental strand, 9189986 - 9189836
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 242  Q
    ||||||||  ||||||||||||||||||||||  |||| |||||||  |||  ||||||||||||||  ||   ||||||||||||||||||||||||      
T  9189986 aagaacaagtcctaatttctacccatttttcatatcacccacactcttaatgaatcctaagagaaaac-acacaaggaagctttttgatccttccaatgg 9189888  T
Q  243 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacct 293  Q
    ||||  |||| |||||| ||||||| ||| |||||||||||||||||||||||    
T  9189887 tgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacct 9189836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 2580508 - 2580659
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 242  Q
    ||||||||  |||| |||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| || | ||||||||||||||||||| ||||      
T  2580508 aagaacaagtcctagtttctacccatttttcatatcacccacactctcaatgaatcctaagag-aaaacacaaaaggaagctttttgatcctttcaatgg 2580606  T
Q  243 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||  |||| |||||| ||||||| | ||||||| ||||||||||||||||||    
T  2580607 tgaaatctcactacccaaggtgtttac-aatgttttccaacccaagagaacctc 2580659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 290
Target Start/End: Complemental strand, 9235591 - 9235414
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||||||  |||| | ||||| |||   |||||||||| |||| |    
T  9235591 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccgcactctcaacgaatcctaagag-aaaaca 9235493  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaa 290  Q
    | | ||||||||||||||||||| ||||  ||||   ||| || ||| ||||||| | ||||||||||||||||||||||    
T  9235492 caaaaggaagctttttgatccttgcaatggtgaaatatcactatccaaggtgtttac-aatgtttcccaacccaagagaa 9235414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 293
Target Start/End: Complemental strand, 33332458 - 33332279
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||| |||||||  | |||| ||||||| ||||   |||||||||||||  |    
T  33332458 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcatttttgta-tcacgcacactctcaatgattcctaagagaaaac-a 33332361  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacct 293  Q
    | |  |||||||||||||||||||||||  ||||  |||| |||||| | ||||| | |||||||| ||||||||||||||||    
T  33332360 caaagggaagctttttgatccttccaatggtgaaatctcactacccaagatgtttac-aatgtttctcaacccaagagaacct 33332279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 2647733 - 2647525
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  2647733 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 2647636  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 281  Q
    ||||| ||||  |||||||||| |||| || | | |||| |||||||||||||||||  ||||  |||| |||||| |||| || |  ||||||||||||    
T  2647635 cactctcaatgaatcctaagag-aaaacacaaaatgaagttttttgatccttccaatggtgaaatctcactacccaaggtgcttac-catgtttcccaac 2647538  T
Q  282 ccaagagaacctc 294  Q
    |||||||| ||||    
T  2647537 ccaagagatcctc 2647525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 24525992 - 24526051
Alignment:
Q  114 gttacaagaaattagatt--aaaaactcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||  | || |||||||||||||||||||||||||||||||||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccatttt 24526051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 761261 - 761328
Alignment:
Q  112 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtca 179  Q
    ||||||||| |||| || | |||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  761261 aggttacaataaatgagctcaaaagctcacaaagaaaaaacactaatttctacccatttttcaagtca 761328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 4162805 - 4162655
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||||||||  | | ||| |||| |||||||||||| ||||||  || ||||||||||||||| | ||||||||||  ||||||||||||| |||     
T  4162805 atccactatgatatgactaatacaaagtggttacaagaaagtagattccaa-ctcacaaagaacaaatcataatttctacttatttttcaagtcattcaa 4162707  T
Q  185 actcacaatatatcctaagagaaaa-atactataggaagctttttgatcctt 235  Q
    || || |||  ||| ||| |||||| ||| || || ||||||||| ||||||    
T  4162706 acccataatgaatcataacagaaaacatattaaagaaagctttttcatcctt 4162655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 286
Target Start/End: Original strand, 49091721 - 49091924
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||  ||| || || ||| |||||||| |||||||||||||||||| |    ||||| ||    
T  49091721 atccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctacccattctgt--gtcaccca 49091818  T
Q  184 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 278  Q
    ||||| | |||    ||||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||    
T  49091819 cactctccataatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgttttc-aatgtttccc 49091916  T
Q  279 aacccaag 286  Q
    ||||||||    
T  49091917 aacccaag 49091924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 56007 - 56163
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  56007 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 56104  T
Q  184 cactcacaata---tatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||||| |||||    |||||||||| |||| || | | ||||||||||||||||||||||    
T  56105 cactctcaataatgaatcctaagag-aaaacacaaaaagaagctttttgatccttccaat 56163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 4796675 - 4796496
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||| |||||||| |||| |||| ||||||||||    |||||  ||| || ||||  ||||||||||||||  |    
T  4796675 gttacaagaaattagcttataagcttacacaagaacaagacctcatttatacccattttgt--gtcacctacattctcaatgaatcctaagagaaaac-a 4796579  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | | ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||| ||||    
T  4796578 caaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgttttccaacccaagagatcctc 4796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 286
Target Start/End: Original strand, 35960905 - 35961078
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcaca-atatatcctaagagaaaaat 211  Q
    |||| |||||||||| ||| || || ||||| |||||| |||||||||||||||||||| ||  |||| |||||||| | ||  ||| ||||||||||      
T  35960905 gttagaagaaattagcttataagcttacaaaagaacaatacctaatttctacccatttt-catatcacccacactcaaagatgaatcttaagagaaaacg 35961003  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaag 286  Q
     | | ||||||||||||||||||||||||  ||||  |||| |||| | ||||||| | ||||||||||||||||||    
T  35961004 -caaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttac-aatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 36146605 - 36146646
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  36146605 acccaaggtgtttacaaatgtttcccaacccaagagaacctc 36146646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 45685727 - 45685658
Alignment:
Q  140 acaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    |||||||||||| | ||||||||| |||||||| |||||||||| | || ||||  ||||||||||||||    
T  45685727 acaaagaacaaaccttaatttctatccattttttaagtcactcaaagtcgcaatgaatcctaagagaaaa 45685658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 46516347 - 46516260
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||| | |||| || |||   ||||||||||||||| |||||| || ||| |||||||| || |||||||||||||||||    
T  46516347 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaaagcttacacaagaacaagacataatttctacccatttt 46516260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 46516209 - 46516133
Alignment:
Q  219 gaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||| ||||||| ||||    
T  46516209 gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaactcaagagatcctc 46516133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 8359412 - 8359471
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||| ||| |||||||||||||||||||    
T  8359412 ggttacaagaaattagtttaaacaagctcacaaagaa-aaaccctaatttctacccatttt 8359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 23565157 - 23565217
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattttt 172  Q
    ||||||||||||||| || || |  |||||||||||||| |||||||||||||| ||||||    
T  23565157 gttacaagaaattagtttcaacaagctcacaaagaacaagacctaatttctacctattttt 23565217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 319
Target Start/End: Original strand, 30843510 - 30843539
Alignment:
Q  290 acctcctttgatttcttaagtttctctctc 319  Q
    ||||||||||||||||||||||||||||||    
T  30843510 acctcctttgatttcttaagtttctctctc 30843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 36574601 - 36574665
Alignment:
Q  103 gatataaagaggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacc 165  Q
    ||||||||  |||||||||||||||| || ||  ||||||||||||||||| | |||||||||||    
T  36574601 gatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttctacc 36574665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 41649106 - 41649166
Alignment:
Q  113 ggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttc 173  Q
    |||||||||||||||| | || || ||||||||||||||| ||||||||||||| |||||||    
T  41649106 ggttacaagaaattagctaaacaagctcacaaagaacaaa-cctaatttctaccaatttttc 41649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 2479535 - 2479605
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  2479535 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 2479605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 4253794 - 4253830
Alignment:
Q  290 acctcctttgatttcttaagtttctctctcttaaagc 326  Q
    |||||||||||||||  ||||||||||||||||||||    
T  4253794 acctcctttgatttcccaagtttctctctcttaaagc 4253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 81 - 293
Target Start/End: Complemental strand, 33721600 - 33721387
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||||| | | ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||| | |||||    
T  33721600 tctgatccactatgataagaattatacaaagaggttacaagaaattagtttaaaaactcataaagaacaaaacctaattttcccccattttttaggtcac 33721501  T
Q  181 tcacactcacaa-tatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcc 277  Q
     |||||||  || |  ||||||||||||||  |||| ||| |||||||| ||| |||||||||||||  |||| || | | ||||||| |||||||||||    
T  33721500 acacactcctaaatgaatcctaagagaaaac-actaaagggagctttttcatcattccaataatgaaatctcacta-caaaggtgtttacaaatgtttcc 33721403  T
Q  278 caacccaagagaacct 293  Q
    ||||| ||||||||||    
T  33721402 caacctaagagaacct 33721387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 30518169 - 30518006
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||||| ||||||| |||||||||||| |||| ||  ||||||  |||||||||||||| | ||||||||||| ||||||||||| ||    
T  30518169 tctgatccactatgataagagtgatacaaagaggttacatgaaactaacttaaaagttcacaaagaacaaaccttaatttctacctatttttcaagttac 30518070  T
Q  181 tcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa 246  Q
     |||||||||||   |  || |||| |||| |||| |||||| |||||||||||||||||||||||    
T  30518069 ccacactcacaaatgaatcttagag-aaaacactaaaggaag-tttttgatccttccaataatgaa 30518006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 1115141 - 1115033
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||||||||| | ||||| ||| |||||||||||||| |  |||||| |||| ||| |||||| ||||||||||| |||||||||||||||| |||    
T  1115141 atccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctcaaaaataacaaaccctaatttctatccatttttcaagtcacccac 1115042  T
Q  185 actcacaat 193  Q
    |||||||||    
T  1115041 actcacaat 1115033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 293
Target Start/End: Original strand, 14521785 - 14521944
Alignment:
Q  137 ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttc 236  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| ||||| |||||||||| |||| | || |||||| ||||| |||||||    
T  14521785 ctcacaaagaacacaacctaatttctacacatttttcatgtcacccacactctcaataaatcctaagag-aaaacattaaaggaagattttttatccttc 14521883  T
Q  237 caataatgaa---ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacct 293  Q
    ||||  ||||   |||| |||||| ||||||| | ||||||||||||||  |||||||||||    
T  14521884 caatggtgaaattctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacct 14521944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 294
Target Start/End: Complemental strand, 24435978 - 24435799
Alignment:
Q  115 ttacaagaaattagattaaaaactcacaaagaa-caaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 213  Q
    |||||||||||||| ||| || || ||||| || ||| |||||||||||||||||||||  | |||| |||| ||| |||  ||||||||||||||  ||    
T  24435978 ttacaagaaattagcttataagcttacaaaaaaacaagacctaatttctacccatttttata-tcacccacattcataatgaatcctaagagaaaac-ac 24435881  T
Q  214 tataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||| ||||||||||||    
T  24435880 aaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaactcaagagaacctc 24435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 31936695 - 31936844
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 242  Q
    ||||||||| ||||||||||||||||||||||  |||| ||||||| ||||  |||||||||||||   ||   | ||||||||||||||||||||||      
T  31936695 aagaacaaatcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaa---acacaaagaagctttttgatccttccaatgg 31936791  T
Q  243 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||  |||| |||||| ||||||| | ||||||||||||||||| ||| ||||    
T  31936792 tgaaatctcactacccaaggtgtttac-aatgtttcccaacccaatagatcctc 31936844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 99245 - 99357
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatac 213  Q
    ||||||||||||||| ||| || |||||| ||||||||   |||||||||||||||||| |||| |||||||||||||||  |||||| ||| |||||||    
T  99245 gttacaagaaattagcttagaagctcacagagaacaaactttaatttctacccattttt-aagttactcacactcacaatgaatcctatgag-aaaatac 99342  T
Q  214 tataggaagcttttt 228  Q
     | ||||||||||||    
T  99343 caaaggaagcttttt 99357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 289
Target Start/End: Complemental strand, 5572278 - 5572076
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||| ||||||    ||||| ||    
T  5572278 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacgcattttgt--gtcaccca 5572181  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 281  Q
    ||||| ||||  ||||||||||||||  || | ||||||||||| |||| |||||||| ||||  |||| |||||| ||||||| ||| |||||||||||    
T  5572180 cactctcaatgaatcctaagagaaaac-acaaaaggaagctttt-gatcattccaatagtgaaatctcactacccaaggtgtttacaa-tgtttcccaac 5572084  T
Q  282 ccaagaga 289  Q
    ||||||||    
T  5572083 ccaagaga 5572076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 31979602 - 31979781
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||  ||| || || ||||| |||||| |||||||||||||||||||||   ||||| ||||||| ||||  |||||||||| |||| |    
T  31979602 gttacaagaaattaacttataagcttacaaaagaacaagacctaatttctacccattttt-gtgtcacccacactctcaatgaatcctaagag-aaaaca 31979699  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | ||||||| ||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||| |||||||| ||||||||    
T  31979700 caaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttctcaacccaaaagaacctc 31979781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 16569108 - 16569047
Alignment:
Q  112 aggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||    
T  16569108 aggttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccatttt 16569047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 240
Target Start/End: Complemental strand, 10077202 - 10077051
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || ||| | ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| ||    
T  10077202 atccactatgatgaaagtgttacaaaaaagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcaccca 10077105  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||||  ||||  |||||||||  |||| || | ||||||||||||||||||||||||    
T  10077104 cact--caatgaatcctaaga-taaaacacaaaaggaagctttttgatccttccaat 10077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 31076978 - 31076849
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatt-----tttcaagtca 179  Q
    |||||||| ||||| ||||||| |||  |||||||| ||||||| |||| |  ||||||||||||| ||||||||| || |||||     ||||||||||    
T  31076978 atccactaagataaaagtgatacaaatgggttacaataaattagcttaagagttcacaaagaacaagacctaatttttatccatttttaatttcaagtca 31076879  T
Q  180 ctcacactcacaatatatcctaagagaaaa 209  Q
    | |||| |||| ||  ||||||||||||||    
T  31076878 cccacaatcactatgaatcctaagagaaaa 31076849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 5017402 - 5017324
Alignment:
Q  217 aggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||| ||||||||||||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  5017402 aggaagcttttcgatccttccaatggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 5017324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 21801394 - 21801170
Alignment:
Q  72 gagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccattt 170  Q
    |||||||| ||  |||||||| ||||| |||| || |||   ||||||||||||||  ||| || || ||||| |||||| || ||||||||||||||||    
T  21801394 gagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaaagaacaagacttaatttctacccattt 21801295  T
Q  171 ttcaagtcactcacactcacaa-tatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgc 267  Q
    |    ||||| ||||||| ||| |  | ||||||||||||  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| |    
T  21801294 tgt--gtcacccacactctcaaatgaaccctaagagaaaac-acaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgtttac 21801198  T
Q  268 aaatgtttcccaacc--caagagaacctc 294  Q
     ||||||||||||||  ||||||||||||    
T  21801197 -aatgtttcccaaccctcaagagaacctc 21801170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 33690846 - 33690738
Alignment:
Q  101 gtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcct 200  Q
    |||||| ||||| |||||||||||||| ||   || |||| |||||||||   ||||||||||| || ||||||||||||||| || ||| ||  |||||    
T  33690846 gtgatacaaagatgttacaagaaattatatcctaagctcaaaaagaacaagctctaatttctacacacttttcaagtcactcaaacccacgatgaatcct 33690747  T
Q  201 aagagaaaa 209  Q
    |||| ||||    
T  33690746 aagaaaaaa 33690738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 22424922 - 22424983
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 173  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||||    
T  22424922 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 31086510 - 31086423
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||| | |||| || ||||  ||||||||||||||| ||| || || ||| |||| ||| ||||||||||||||||||||    
T  31086510 atccactatgatgaaagtgttacaaaggagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacccatttt 31086423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 31419035 - 31418929
Alignment:
Q  102 tgatataaagaggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcct 200  Q
    ||||| ||||| |||||||||||||| ||||| || ||| ||||||||||    |||||||| || ||||||||||||||||| || ||||| | || ||    
T  31419035 tgatacaaagaagttacaagaaattatattaacaagctctcaaagaacaatctttaatttcttcc-atttttcaagtcactcaaacccacaacaaattct 31418937  T
Q  201 aagagaaa 208  Q
    ||||||||    
T  31418936 aagagaaa 31418929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 5017488 - 5017430
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    
T  5017488 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt 5017430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 2973034 - 2973093
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  2973034 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 2973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 28137503 - 28137562
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||  |||||||||||||||||||    
T  28137503 ggttacaagaaattagcttaaacaagctcacaaagaacaac-cctaatttctacccatttt 28137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 4045319 - 4045283
Alignment:
Q  290 acctcctttgatttcttaagtttctctctcttaaagc 326  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  4045319 acctccattgatttctcaagtttctctctcttaaagc 4045283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 16567265 - 16567210
Alignment:
Q  118 caagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||| ||||| |  |||||||| |||||||||||||||||| |||||||    
T  16567265 caagaaattagcttaaacaagctcacaaaaaacaaaacctaatttctaaccatttt 16567210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 2630291 - 2630445
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||||||| | ||||||| |||  |||||||| ||||||| |||||||| |||||||||||||||||||||| ||  ||||||||||||||| | |    
T  2630291 atccactatgatgaaagtgatacaaaagggttacaataaattagcttaaaaacacacaaagaacaaaacctaatttttatacatttttcaagtcaccctc 2630390  T
Q  185 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    |||||||||  |||||||||| |||| |||| ||||||||||||||||||| ||||    
T  2630391 actcacaatgaatcctaagag-aaaacactaaaggaagctttttgatcctttcaat 2630445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 33030949 - 33030854
Alignment:
Q  113 ggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaa 208  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  33030949 ggttacaagaaattagcttaaaagctcacaaagaacaaaacataatttctacccatttttcaagtcactcacactctcaatgaatcctaagagaaa 33030854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 11181869 - 11181660
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||| ||| | ||||||| |||   |||||||||||||||  ||||| ||| |||| |||||| |||||||||||||||||||| || ||||| ||    
T  11181869 atccactaagatgaaagtgatacaaatgagttacaagaaattagcctaaaagctctcaaatgaacaagacctaatttctacccatttt-catgtcaccca 11181771  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaact--cattacccatggtgtttgcaaatgtttcccaac 281  Q
    ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||  |||| |  || |||||| ||||||| ||| |||||||||||    
T  11181770 cactcacaatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaatggtgaaatttcactacccaaggtgtttacaa-tgtttcccaac 11181673  T
Q  282 ccaagagaacctc 294  Q
    |||||||||||||    
T  11181672 ccaagagaacctc 11181660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 6741885 - 6742036
Alignment:
Q  58 tactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaa 157  Q
    ||||| || ||||||||||||| ||  ||||| || |||   ||||||| ||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  6741885 tactctgggggatagagcagctctccaatccattaagatggaagtgatacaaagaagttacaagaaattagcttgcaaactcacaaagaacaaaacctaa 6741984  T
Q  158 tttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    ||||||| ||||||||||||||| ||||||| ||||  ||||||||| ||||    
T  6741985 tttctactcatttttcaagtcacccacactctcaatgaatcctaagaaaaaa 6742036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 100 - 294
Target Start/End: Complemental strand, 7160925 - 7160732
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 199  Q
    ||||||| |||| |||||||| |||||||||| ||| |||||||||||||| || ||||||||||  |||||| |||||||| |||||| ||||  ||||    
T  7160925 agtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagacttaatttctacatattttttaagtcact-acactctcaatgaatcc 7160827  T
Q  200 taagagaaaa-atactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    |||||||||| |||  ||  |||||||||||||||||||||| |||||  |||| |  ||| |||| || | |||||||||||| |||||||||||||    
T  7160826 taagagaaaacataaaat--gaagctttttgatccttccaatgatgaaatctcactgtccaaggtgattac-aatgtttcccaatccaagagaacctc 7160732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 28832386 - 28832526
Alignment:
Q  154 ctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcat 251  Q
    |||||||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| || | ||||||||||||||||||||||||  ||||  ||||     
T  28832386 ctaatttctacccatttttcatatcacccacactctcaatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaatggtgaaatctcac 28832484  T
Q  252 tacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    |||||| ||||||| | ||||||||||||||||||||||||||    
T  28832485 tacccaaggtgtttac-aatgtttcccaacccaagagaacctc 28832526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 285
Target Start/End: Original strand, 5611198 - 5611403
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||||| | ||||| |||||| ||| || ||||||| ||||||  ||||||||||||||| || ||||||| |||||||| ||||||     
T  5611198 tctgatccactatgataaaactgatacaaagagattaaaaaaaattagcttaaaagttcacaaagaacaaaatcttatttctatccattttt-aagtcat 5611296  T
Q  181 tcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcc 277  Q
      |||||||  |||   ||||||||| |||| |||| || ||||||||||||| || ||||||||||  ||||||| | | ||||||| | |||||||||    
T  5611297 aaacactcataaatgattcctaagag-aaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttaccaatgtttcc 5611395  T
Q  278 caacccaa 285  Q
    ||| ||||    
T  5611396 caatccaa 5611403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 294
Target Start/End: Original strand, 10281797 - 10282023
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||    
T  10281797 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatt 10281896  T
Q  170 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgttt 265  Q
    ||    ||||| ||||||||||||||  |||||||||| |||| || | || |||||||||||||||||||||  ||||  |||| |||||| |||||||    
T  10281897 tt--gtgtcacccacactcacaatatgaatcctaagag-aaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgttt 10281993  T
Q  266 gcaaatgtttcccaacc--caagagaacctc 294  Q
     | |||||||| |||||  ||||||||||||    
T  10281994 ac-aatgtttcacaaccctcaagagaacctc 10282023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 294
Target Start/End: Complemental strand, 17003938 - 17003787
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    |||||||| |||||||||||||||||||   |  |||||||| ||||||||||  ||||||||||||||  || | ||||||||||||||||||||||||    
T  17003938 aagaacaagacctaatttctacccattta--atttcactcactctcacaatatgaatcctaagagaaaac-acaaaaggaagctttttgatccttccaat 17003842  T
Q  241 aatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
      ||||  |||| |||||| ||||||| | ||||||||| ||||||||||||||||    
T  17003841 ggtgaaatctcactacccaaggtgtttac-aatgtttccaaacccaagagaacctc 17003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 294
Target Start/End: Complemental strand, 31300574 - 31300423
Alignment:
Q  143 aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataa 242  Q
    ||||||||  |||||||||||||||||| |||  |||| ||||||| ||||  |||||||||| |||| || | ||||||| ||||||||||||||||      
T  31300574 aagaacaagtcctaatttctacccatttctcatatcacccacactctcaatgaatcctaagag-aaaacacaaaaggaagccttttgatccttccaatgg 31300476  T
Q  243 tgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||  |||| |||||| ||||||| | |||||||| |||||||||||||||||    
T  31300475 tgaaatctcactacccaaggtgtttac-aatgtttctcaacccaagagaacctc 31300423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 240
Target Start/End: Original strand, 3880345 - 3880514
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||    
T  3880345 agagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacacaagaacaagacctaatttctacccatt 3880444  T
Q  170 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||    ||||| ||| ||||||||||  |||||| |||||||| || | ||||||||||||||||||||||||    
T  3880445 tt--gtgtcacccactctcacaatatgaatcctaggagaaaaa-acaaaaggaagctttttgatccttccaat 3880514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 274
Target Start/End: Original strand, 30899933 - 30900116
Alignment:
Q  91 tatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcac 190  Q
    ||||| || ||||||| |||||||||||||||||||||  || || |||||||||||||||  ||| |||||||  |||||||||| |||||| || |||    
T  30899933 tatgagaagagtgatacaaagaggttacaagaaattagcctacaagctcacaaagaacaaactctattttctactgatttttcaagccactcaaacccac 30900032  T
Q  191 aatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtt 274  Q
    ||   ||||| |||| |||| |||| || ||||||||| ||||||||  |||||||  |||| |||||| |||||||  |||||||    
T  30900033 aaagaatcct-agag-aaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttataaatgtt 30900116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 34842649 - 34842785
Alignment:
Q  71 agagcagctatctgatccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||| |||||||||| |||| ||||||| |||||||||||||||  |||  ||| || ||||| ||||||| | |||||||||||| ||||    
T  34842649 agagcagctctctaatccactatg-taatgagtgatacaaagaggttacaagatgttatcttacaagctcaccaagaacatatcctaatttctactcatt 34842747  T
Q  170 tttcaagtcactcacactcacaatatatcctaagagaa 207  Q
    |||||||||||| | || ||||||  || |||||||||    
T  34842748 tttcaagtcactaaaacccacaatgaattctaagagaa 34842785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 42127419 - 42127293
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  |||| |||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| |    
T  42127419 gttacaagaaattagcttataagcttacaaaagaacaagtcctactttctacccatttttcatatcacccacactctcaatgaatcctaagag-aaaaca 42127321  T
Q  213 ctataggaagctttttgatccttccaat 240  Q
    | | || |||||||||||||||||||||    
T  42127320 caaaagaaagctttttgatccttccaat 42127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 294
Target Start/End: Complemental strand, 12084226 - 12084005
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatt 169  Q
    ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||  |||||| || ||| |||||||| ||||||||||||||||||    
T  12084226 agagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattaacttaaaagcttacacaagaacaagacctaatttctacccatt 12084128  T
Q  170 tttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttcc-aataatgaa--ctcattacccatggtgtt 264  Q
    | |   ||||| ||| ||||||||||  ||||||||| ||||| || | |||||||||||  |||||||| |||  ||||  |||| |||||| ||||||    
T  12084127 tgt---gtcacccactctcacaatatgaatcctaaga-aaaaacacaaaaggaagctttt--atccttccaaatggtgaattctcactacccaaggtgtt 12084034  T
Q  265 tgcaaatgtttcccaacccaagagaacctc 294  Q
    |  |||||||| ||||||||||||| ||||    
T  12084033 t-aaaatgtttaccaacccaagagatcctc 12084005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 3651613 - 3651658
Alignment:
Q  138 tcacaaagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  3651613 tcacaaagaacaaaccctaatttctacccatttttcaagtcactca 3651658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 24553496 - 24553355
Alignment:
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctca 250  Q
    |||||||||||||||||||| |  | || |||||||  |||  || |||||||||||  || | |||||||||||||||||||| |||  ||||  ||||    
T  24553496 cctaatttctacccattttttatatgacccacactcttaatgaattctaagagaaaac-acaaaaggaagctttttgatccttctaatggtgaaatctca 24553398  T
Q  251 ttacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     |||||| ||||||| ||| ||||||||||||||||||||||||    
T  24553397 ctacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 24553355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 31336153 - 31336262
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcc 199  Q
    ||||||| |||||| ||||||||||||||||    | ||||| ||||| ||| ||| |||| || ||||||| ||||||||||| || ||||||| ||||    
T  31336153 agtgatacaaagagcttacaagaaattagatcccgatctcactaagaaaaaatccttatttatatccatttt-caagtcactcaaacccacaataaatcc 31336251  T
Q  200 taagagaaaaa 210  Q
    |||||||||||    
T  31336252 taagagaaaaa 31336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 33831753 - 33831692
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 173  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||||    
T  33831753 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttc 33831692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 19588806 - 19589014
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||  ||| || || ||| |||||||| |||||||||||||||  ||||   ||||| ||    
T  19588806 atccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagacctaatttctaccc--tttttgtgtcaccca 19588903  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaac 281  Q
    || || ||||  |||||||||| |||| || | |||||| |||||||||||||||||  ||||  |||| | |||| | ||||| | |||||||||||||    
T  19588904 caatctcaatgaatcctaagag-aaaacacaaaaggaagatttttgatccttccaatggtgaaatctcactgcccaagatgtttac-aatgtttcccaac 19589001  T
Q  282 ccaagagaacctc 294  Q
    |||||||| ||||    
T  19589002 ccaagagatcctc 19589014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 3075753 - 3075812
Alignment:
Q  113 ggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||||||| |  || |||||||||||| |||||||||||||||| |||||    
T  3075753 ggttacaagaaattagattcagcaagctcacaaagaac-aaacctaatttctacctatttt 3075812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 8566041 - 8566100
Alignment:
Q  113 ggttacaagaaattagattaa--aaactcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||  || |||||||||||| |||||||| |||||||||||||    
T  8566041 ggttacaagaaattagcttaaacaagctcacaaagaac-aaacctaagttctacccatttt 8566100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 11916871 - 11916800
Alignment:
Q  224 tttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    |||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  11916871 tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 11916800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 31183045 - 31182986
Alignment:
Q  113 ggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||  |||||  ||||||||||||||||  |||||||||||||||||||    
T  31183045 ggttacaagaaattaacttaaacaaactcacaaagaacaat-cctaatttctacccatttt 31182986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 9353230 - 9353160
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  9353230 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 9353160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 19806432 - 19806395
Alignment:
Q  134 aaactcacaaagaacaaaacctaatttctacccatttttc 173  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  19806432 aaactcacaaagaacaa--cctaatttctacccatttttc 19806395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 4386985 - 4386851
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaac 153  Q
    ||||||||| || ||| ||||||||| ||  ||||| || ||||| ||||||| |||  |||||||||||||||| |||||| |||||||||||||||||    
T  4386985 gacctactctgggggagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaacaaaac 4386886  T
Q  154 ctaatttctacccatttttcaagtcactcacactc 188  Q
    ||||||||||| ||||||||||||||| |||||||    
T  4386885 ctaatttctactcatttttcaagtcacccacactc 4386851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 114 - 290
Target Start/End: Complemental strand, 3328355 - 3328178
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  ||||||||||||||||||||||  |||| ||||||| |||| ||||||||||| |||| |    
T  3328355 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgtatcctaagag-aaaaca 3328257  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaa 290  Q
    | | |||||| |||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||||    
T  3328256 caaaaggaagttttttgatccttccaatgctgaaatctcactacccaaggtgtttac-aatgttttccaacccaagagaa 3328178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 29100220 - 29100324
Alignment:
Q  86 tccactatgataat-agtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||||||||  ||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||  ||    
T  29100220 tccactatgataaagagtgatacaaagaggttataagaaattagcttaaaaactcacaaagaacaaaccctaatttctactcgtttttcaagtcacctac 29100319  T
Q  185 actca 189  Q
    |||||    
T  29100320 actca 29100324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 287
Target Start/End: Complemental strand, 5366355 - 5366146
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||  |||||| ||||||| ||| ||| | |||||||||||| |||||| ||||||    
T  5366355 tctgatccactatgatgaaagtgatacaaagaggttacaagaaattatcttaaaatctcacaatgaaaaaatcttaatttctacccttttttctagtcac 5366256  T
Q  181 tcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaa-taatgaa--ctcattacccatggtgtttgcaaatgtttc 276  Q
     |||||| |  |||  |||||||| | |||| |||| ||||| ||||| ||||||||||| || ||||  || | |||||| ||||||| |||||||||     
T  5366255 ccacactaataaatgaatcctaagcg-aaaacactaaaggaaacttttcgatccttccaattattgaaatcttactacccaaggtgtttacaaatgtttt 5366157  T
Q  277 ccaacccaaga 287  Q
    ||||| |||||    
T  5366156 ccaactcaaga 5366146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 40592780 - 40592599
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaa 210  Q
    ||||||||||||||| ||| || || ||| |||||||||| ||||||||||||||||||    ||||| ||| ||||||||||  |||||||||| ||||    
T  40592780 gttacaagaaattagcttacaagcttacacaagaacaaaatctaatttctacccatttt--gtgtcacccactctcacaatatgaatcctaagag-aaaa 40592684  T
Q  211 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
     || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  40592683 cacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 40592599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 21353622 - 21353776
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcac 184  Q
    |||||||| ||| | ||||||| |||   |||||||||||||||   || | ||||||||||||| |||||||||||||||||||||||| | |||||||    
T  21353622 atccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaatttctacccatttttcatgccactcac 21353721  T
Q  185 actcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||| |||||  ||| |||||| |||| |||| ||||| ||||| ||||||||||||    
T  21353722 acttacaatgaatcttaagag-aaaacactaaaggaaacttttggatccttccaat 21353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 36029153 - 36029362
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| ||||| ||| |||||||| ||||||||||||||||||||    ||||||||    
T  36029153 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaacttacacaagaacaagacctaatttctacccatttt--gtgtcactca 36029250  T
Q  184 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 279  Q
    | |||| |||||  |||||||||| |||| || | ||||||| ||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||||||    
T  36029251 ctctcaaaatatgaatcctaagag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccca 36029347  T
Q  280 acccaagagaacctc 294  Q
    |||||||||| ||||    
T  36029348 acccaagagatcctc 36029362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 3323689 - 3323508
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| ||||||  | ||||||||||||||| ||||  |||| ||||||| ||||  || |||||||||||  |    
T  3323689 gttacaagaaattagcttataagcttacaaaagaacaagtcataatttctacccattgttcatatcacccacactctcaatgaattctaagagaaaac-a 3323591  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | |||||||||||||||| |||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  3323590 caaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagaacctc 3323508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 8126719 - 8126899
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| || || ||||| |||||| || ||||||||||||||||||   ||||| ||||||| ||||  ||| ||||||||||  |    
T  8126719 gttacaagaaattagcttataagcttacaaaagaacaatacttaatttctacccatttttgt-gtcacccacactctcaatgaatcttaagagaaaac-a 8126816  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | | |||||||||||||||||||||| |||||  |||| |||||| ||||||| | ||||||||||||||||||| ||||||    
T  8126817 caaaaagaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagaaaacctc 8126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 285
Target Start/End: Original strand, 21156485 - 21156690
Alignment:
Q  81 tctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcac 180  Q
    |||||||||||||||||| | ||||| |||||| ||| || ||||||| ||||||  ||||||||||||||| || ||||||| |||||||| ||||||     
T  21156485 tctgatccactatgataaaactgatacaaagagattaaaaaaaattagcttaaaagttcacaaagaacaaaatcttatttctatccattttt-aagtcat 21156583  T
Q  181 tcacactca-caatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcc 277  Q
      |||||||  |||   ||||||||| |||| |||| || ||||||||||||| || ||||||||||  ||||||| | | ||||||| | |||||||||    
T  21156584 aaacactcataaatgattcctaagag-aaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttaccaatgtttcc 21156682  T
Q  278 caacccaa 285  Q
    ||| ||||    
T  21156683 caatccaa 21156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 25517069 - 25517148
Alignment:
Q  112 aggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcaca 191  Q
    |||||| |||||||||| |||||| ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  25517069 aggttataagaaattagcttaaaagctcacaaagaacaaaccctaatttctacttatttttcaagtcacccacactcaca 25517148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 5797204 - 5797305
Alignment:
Q  89 actatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactc 188  Q
    ||||||| |||||||||| || |||||||||||||||||||||  ||||||||||| ||||||  |||||||||  ||||||||||||||||| | ||||    
T  5797204 actatgaaaatagtgatacaa-gaggttacaagaaattagattccaaactcacaaataacaaactctaatttctttccatttttcaagtcacttaaactc 5797302  T
Q  189 aca 191  Q
    |||    
T  5797303 aca 5797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 35925540 - 35925747
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaa-agaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||||| |||||||||||||| ||| || || |||  ||||||||||||||||||||||||||| |   ||||| ||    
T  35925540 atccactatgatgaaagtgttacaaagag-ttacaagaaattagtttataagcttacactagaacaaaacctaatttctacccatttgt---gtcaccca 35925635  T
Q  184 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 279  Q
    | ||||||||||  |||||||||| |||| || | ||||||| ||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||||||    
T  35925636 ctctcacaatatgaatcctaagag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccca 35925732  T
Q  280 acccaagagaacctc 294  Q
    |||||| ||| ||||    
T  35925733 acccaaaagatcctc 35925747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 294
Target Start/End: Complemental strand, 8370544 - 8370306
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| |||||| || ||| |||||||| |    
T  8370544 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagaacaaga 8370446  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ct 248  Q
    | |||||||||||||||| |   ||||| ||| ||||||||||  ||||||||||||||  || | ||||| ||||| ||||||||||||  ||||  ||    
T  8370445 cataatttctacccatttgt---gtcacccactctcacaatatgaatcctaagagaaaac-acaaaaggaaactttt-gatccttccaatggtgaaatct 8370351  T
Q  249 cattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    || |||||| | ||||| ||| ||||||||||||||||||| ||||    
T  8370350 cactacccaagatgtttacaa-tgtttcccaacccaagagatcctc 8370306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 24695162 - 24694983
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| ||||| ||||| |||||| ||||||||||||||||||||    ||||| ||||||| ||||  ||||||| || |||| |    
T  24695162 gttacaagaaattagcttataaacttacaaaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaatgaatcctaaaag-aaaaca 24695066  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | |||||||||||||||| |||||||  ||||  ||||  ||||| ||||||| | ||||||||||||||||||||| ||||    
T  24695065 caaaaggaagctttttgatcattccaatggtgaaatctcaccacccaaggtgtttac-aatgtttcccaacccaagagatcctc 24694983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 40844711 - 40844864
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  40844711 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 40844808  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaat 240  Q
    ||||| ||||  |||||||||| |||| || | ||||||||||||||||||||||||    
T  40844809 cactctcaatgaatcctaagag-aaaacacaaaaggaagctttttgatccttccaat 40844864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 1417489 - 1417308
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    |||| |||||||||| ||| ||||| ||||| ||||||  ||||||||||||||||||||||  |||| ||||||| ||||  |||||||||| |||| |    
T  1417489 gttataagaaattagcttataaacttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactcccaatgaatcctaagag-aaaaca 1417391  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    | | || || ||||||||||||| ||||  ||||  |||| |||| |  |||||| | ||||||||||||||||||| ||||||    
T  1417390 caaaagaaaactttttgatcctttcaatggtgaaatctcactacctaaagtgtttac-aatgtttcccaacccaagataacctc 1417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 280
Target Start/End: Complemental strand, 18552910 - 18552716
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||| ||| || || ||| |||||||| ||||||||||||||||||||    ||||| ||    
T  18552910 atccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt--gtgtcaccca 18552813  T
Q  184 cactcacaatatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaa 280  Q
    ||||| ||||  |||||||||| |||| || | |||||| |||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||    
T  18552812 cactctcaatgaatcctaagag-aaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaa 18552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 283
Target Start/End: Original strand, 25795870 - 25796038
Alignment:
Q  114 gttacaagaaattagattaaaaactcacaaa-gaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa-at 211  Q
    ||||||||||||||| ||| || || ||||| |||||| ||||||||||||||||||||    ||||| ||||||| ||||  |||||||||||||| ||    
T  25795870 gttacaagaaattagcttataagcttacaaaagaacaagacctaatttctacccatttt--gtgtcacccacactctcaatgaatcctaagagaaaacat 25795967  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaaccc 283  Q
    |  | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | | |||||||||||||    
T  25795968 a--aaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-attgtttcccaaccc 25796038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 3716000 - 3715817
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat--atcctaagagaaaaa 210  Q
    ||||||||||||||| ||| ||||| ||| |||||||| || |||||||||||||||||    ||||| |||  |||||||||  |||||||||| ||||    
T  3716000 gttacaagaaattagcttacaaacttacacaagaacaagacttaatttctacccatttt--gtgtcacccactttcacaatatgaatcctaagag-aaaa 3715904  T
Q  211 tactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
     || | || |||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  3715903 cacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 3715817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 294
Target Start/End: Original strand, 21711252 - 21711491
Alignment:
Q  54 gacctactccggaggatagagcagctatctgatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaa 152  Q
    |||||| || || ||| ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||||||| |||||| || ||| |||| ||| |    
T  21711252 gacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagagcaaga 21711350  T
Q  153 cctaatttctacccatttttcaagtcactcacactcacaata---tatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--c 247  Q
    |||||||||||||||||| |   || || ||||||| |||||    |||||||||| |||| || | ||||||| ||||||||||||||||  ||||  |    
T  21711351 cctaatttctacccatttgt---gttacccacactctcaataatgaatcctaagag-aaaacacaaaaggaagc-ttttgatccttccaatggtgaaatc 21711445  T
Q  248 tcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||| ||| || ||||||| | ||||||||||||||||||||| ||||    
T  21711446 tcactactcaaggtgtttac-aatgtttcccaacccaagagatcctc 21711491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 294
Target Start/End: Original strand, 26299077 - 26299257
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaaata 212  Q
    ||||||||||||||| ||| ||||| | | |||||||| ||||||||||||||||||||    ||||| |||| || ||||  ||||||||||||||       
T  26299077 gttacaagaaattagcttataaacttagacaagaacaagacctaatttctacccatttt--gtgtcacccacaatctcaattaatcctaagagaaaacac 26299174  T
Q  213 ctataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
      | |||||||||||||||  |||||||  ||||  |||| |||||| ||||||| | ||||||||||||||||||||| ||||    
T  26299175 aaaaaggaagctttttgataattccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagagatcctc 26299257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 289
Target Start/End: Complemental strand, 47923904 - 47923726
Alignment:
Q  114 gttacaagaaattagattaaaaact--cacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatat---atcctaagagaaa 208  Q
    ||||||||||||||| ||||||  |  |||||||| ||||||||||||| ||||||||||    ||||  ||||||| |||||    |||||| ||||||    
T  47923904 gttacaagaaattagcttaaaagtttacacaaagagcaaaacctaatttatacccattttgt--gtcatccacactctcaataatgaatcctacgagaaa 47923807  T
Q  209 aatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagaga 289  Q
    |  || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | |||||||||||||||||||||    
T  47923806 ac-acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaacccaagaga 47923726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 183
Target Start/End: Complemental strand, 41163258 - 41163174
Alignment:
Q  100 agtgatataaagaggttacaagaaattagattaaaaa-ctcacaaagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    ||||||| ||||||||| ||| |||||||||  |||| |||| |||||||||| ||||||||| ||||| || ||||||||||||    
T  41163258 agtgatacaaagaggttccaaaaaattagatccaaaagctcataaagaacaaaccctaatttcgacccagttatcaagtcactca 41163174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 294
Target Start/End: Complemental strand, 1736332 - 1736121
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||||||||| | |||| || |||   ||||||||||||||  ||| || || ||| |||||||| ||||||||||||||||||||    |||||  |    
T  1736332 atccactatgatgaaagtgttacaaaagagttacaagaaattaacttataagcttacacaagaacaagacctaatttctacccattttgt--gtcaccaa 1736235  T
Q  184 cactcacaatat---atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccc 278  Q
    ||||| |||||    ||||||||||||||  || | | ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||    
T  1736234 cactctcaataatgaatcctaagagaaaac-acaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttccc 1736137  T
Q  279 aacccaagagaacctc 294  Q
    ||||||| ||| ||||    
T  1736136 aacccaatagatcctc 1736121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 9666562 - 9666623
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttttc 173  Q
    ||||||||||||||| || || |  |||||||||||||||| ||||||||||||||||||||    
T  9666562 gttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttc 9666623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 294
Target Start/End: Complemental strand, 6794754 - 6794532
Alignment:
Q  71 agagcagctatctgatccactatgataatagtgatataaagaggttacaagaaa-ttagattaaaaactcaca-aagaacaaaacctaatttctacccat 168  Q
    ||||||||| ||  |||||||||||| | |||| || |||||| |||||||||| |||| ||  || || ||| ||||||||  ||||||||||||||||    
T  6794754 agagcagctctccaatccactatgatgaaagtgttacaaagag-ttacaagaaaattagcttgcaagcttacacaagaacaagtcctaatttctacccat 6794656  T
Q  169 ttttcaagtcactcacactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtt 264  Q
    || |   ||||| ||| ||||||||||  | |||||||||||| ||| | ||||||||||| | || |||||||  ||||  |||| |||||| ||||||    
T  6794655 ttgt---gtcacccactctcacaatatgaaccctaagagaaaa-tacaaaaggaagctttt-gttcattccaatggtgaaatctcactacccaaggtgtt 6794561  T
Q  265 tgcaaatgtttcccaacccaagagaacctc 294  Q
    | ||| ||||||||||| ||||||||||||    
T  6794560 tacaa-tgtttcccaactcaagagaacctc 6794532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 22835097 - 22835156
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||    
T  22835097 ggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccatttt 22835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 29196584 - 29196625
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  29196584 acccaaggtgtttacaaatgtttcccaacccaagagaacctc 29196625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 44658521 - 44658396
Alignment:
Q  84 gatccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    ||||||||| ||||| ||||||| ||| | ||||||| ||||||| | |  ||||||||||||| | |  |||||||||| |  | ||||||||||||||    
T  44658521 gatccactaggataagagtgatacaaaaatgttacaataaattagctcactaactcacaaagaagatattctaatttctatctgtatttcaagtcactca 44658422  T
Q  184 cactcacaatatatcctaagagaaaa 209  Q
     || ||||||  |||| |||||||||    
T  44658421 aacccacaattaatcccaagagaaaa 44658396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 25929365 - 25929270
Alignment:
Q  142 aaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa-atactataggaagctttttgatccttcc 237  Q
    ||||||||| ||||| ||||||| |||||| || ||||| ||||||||||||  |||||||||||||| | |  | | |||||||||||||||||||    
T  25929365 aaagaacaagacctagtttctactcatttt-catgtcacccacactcacaatgaatcctaagagaaaacacaaaaaaagaagctttttgatccttcc 25929270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 26928486 - 26928416
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  ||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  26928486 ttttgatccttccaatggtgaaatctcattacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 26928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 32891176 - 32891117
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| || || |  ||||||||||||||||| |||||||||||||||||    
T  32891176 gttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccatttt 32891117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 44700563 - 44700632
Alignment:
Q  103 gatataaagaggttacaagaaattagattaaa--aactcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||| ||| ||||||||||||||||| || ||  ||||||||||||||||  |||||||||||||||||||    
T  44700563 gatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaac-cctaatttctacccatttt 44700632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 44700675 - 44700714
Alignment:
Q  253 acccatggtgtttgcaaatgtttcccaacccaagagaacc 292  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  44700675 acccaaggtgtttacaaatgtttcccaacccaagagaacc 44700714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 29196507 - 29196541
Alignment:
Q  137 ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| |||||||||||||||||||    
T  29196507 ctcacaaagaacaaaccctaatttctacccatttt 29196541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 32744532 - 32744590
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattttt 172  Q
    ||||||||||||||| ||||| |  |||||||||||||||  |||||||||||||||||||    
T  32744532 gttacaagaaattagcttaaacaagctcacaaagaacaaa--ctaatttctacccattttt 32744590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 760920 - 760861
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| ||||| |  ||||||||||||| | |||||||||||||||||||    
T  760920 ggttacaagaaattagcttaaacaagctcacaaagaacaga-cctaatttctacccatttt 760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 5433961 - 5434025
Alignment:
Q  103 gatataaagaggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacc 165  Q
    ||||||||  |||||||||||||||| || || |  ||||||||||||||| |||||||||||||    
T  5433961 gatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctacc 5434025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 46860547 - 46860488
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    |||||||||||||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  46860547 ggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttctacccatttt 46860488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 9581355 - 9581297
Alignment:
Q  113 ggttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccattt 170  Q
    ||||| |||||||||| ||||| |  ||||||||||||||| ||||||||||||||||||    
T  9581355 ggttaaaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 16264548 - 16264618
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  16264548 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 16264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 27986343 - 27986273
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  27986343 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 27986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 37387546 - 37387574
Alignment:
Q  153 cctaatttctacccatttttcaagtcact 181  Q
    |||||||||||||||||||||||||||||    
T  37387546 cctaatttctacccatttttcaagtcact 37387574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 39153457 - 39153515
Alignment:
Q  114 gttacaagaaattagattaaaaa--ctcacaaagaacaaaacctaatttctacccatttt 171  Q
    ||||||||||||||| ||||| |  ||||||| ||||||| |||||||||||||||||||    
T  39153457 gttacaagaaattagcttaaacaagctcacaatgaacaaa-cctaatttctacccatttt 39153515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 285
Target Start/End: Original strand, 14748 - 14943
Alignment:
Q  91 tatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcac 190  Q
    |||||||| ||||||| ||||||||||| ||||||||| |||||| |||||||||||| || |||| || ||||| |||||||||||||| |||||||||    
T  14748 tatgataagagtgatacaaagaggttacgagaaattagcttaaaagctcacaaagaactaaccctagttcctacctatttttcaagtcacccacactcac 14847  T
Q  191 aa--tatatcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaa 285  Q
    ||  |  |||||||||| |||| |||| ||||   |||||||| ||||||||||| ||  ||||  ||| | ||| ||| |||||||||||||||||||    
T  14848 aaagtgaatcctaagag-aaaacactaaagga--gtttttgatgcttccaataataaaatctcaccaccaaaggtatttacaaatgtttcccaacccaa 14943  T

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Target: scaffold0076 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 173
Target Start/End: Complemental strand, 16025 - 15937
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttc 173  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||||||   ||||||||||    
T  16025 atccactatgataagagttatacaaagatgttacaagaaattagcttaaaaacccacaaagaacaaaacctaattttcccccatttttc 15937  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 85 - 294
Target Start/End: Original strand, 85743 - 85952
Alignment:
Q  85 atccactatgataatagtgatataaagaggttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactca 183  Q
    |||||| ||||| | |||| || |||||| |||||||||||||| |||||| || ||| |||| ||| ||||||||||||||||||||    ||| | ||    
T  85743 atccaccatgatgaaagtgttacaaagag-ttacaagaaattagcttaaaagcttacacaagagcaagacctaatttctacccatttt--gtgtctccca 85839  T
Q  184 cactcacaatat--atcctaagagaaaaatactataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttccca 279  Q
    | | ||||||||  || |||||||||||| || | |||||| |||||||||||||||||  ||||  |||| ||||||  |||||| | |||||||||||    
T  85840 ctcccacaatatgaattctaagagaaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaagtgtttac-aatgtttccca 85937  T
Q  280 acccaagagaacctc 294  Q
    |||||||||| ||||    
T  85938 acccaagagatcctc 85952  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 294
Target Start/End: Original strand, 5774 - 5954
Alignment:
Q  116 tacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaat-at--atcctaagagaaaaat 211  Q
    ||||||||||||| ||| || || ||| |||||||| || |||||||||| ||||||    ||||| ||||||| |||| ||  ||||||||||||||      
T  5774 tacaagaaattagcttataagcttacacaagaacaagacttaatttctactcattttgt--gtcacccacactctcaatgatgaatcctaagagaaaac- 5870  T
Q  212 actataggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    || | ||||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||| ||||||||||||| ||||    
T  5871 acaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttgccaacccaagagatcctc 5954  T

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Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 2685 - 2763
Alignment:
Q  217 aggaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||||||||||  ||||  |||| ||| || ||||||| | ||||||||||||||||||||| ||||    
T  2685 aggaagctttttgatccttccaatggtgaaatctcactacgcaaggtgtttac-aatgtttcccaacccaagagatcctc 2763  T

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Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 133177 - 133107
Alignment:
Q  225 ttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacccaagagaacctc 294  Q
    ||||||||||||||||  ||||  |||| |||||| ||||||| ||| ||||||||||||||||||| ||||    
T  133177 ttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa-tgtttcccaacccaagagatcctc 133107  T

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Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 23622 - 23715
Alignment:
Q  115 ttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    ||||||||||||   ||| || |||||||| ||||| | |||||||||||||| |||||| ||||  ||||||||||||  ||||||||||||||    
T  23622 ttacaagaaattttcttagaagctcacaaaaaacaagatctaatttctaccca-ttttcatgtcagacacactcacaatgaatcctaagagaaaa 23715  T

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Target: scaffold1444 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 1258 - 1329
Alignment:
Q  108 aaagaggttacaagaaattagattaaaaactcacaaagaacaaaacctaatttctacccatttttcaagtca 179  Q
    |||||||| |||| |||||| |||  || |||||||| |||||| |||||||||||| ||||||| ||||||    
T  1258 aaagaggtaacaaaaaattatatttcaagctcacaaaaaacaaaccctaatttctactcattttttaagtca 1329  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 17352 - 17446
Alignment:
Q  114 gttacaagaaattagattaaaaactcaca-aagaacaaaacctaatttctacccatttttcaagtcactcacactcacaatatatcctaagagaaaa 209  Q
    ||||||||||||||| ||| || || ||| |||||||| |||||||||||||| |||||    |||||||||||||  |||  ||||||||||||||    
T  17352 gttacaagaaattagcttataagcttacacaagaacaagacctaatttctacctatttt--gtgtcactcacactcttaatgaatcctaagagaaaa 17446  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 10924 - 11002
Alignment:
Q  219 gaagctttttgatccttccaataatgaa--ctcattacccatggtgtttgcaaatgtttcccaacc--caagagaacctc 294  Q
    ||||||||||||||||||||||  ||||  |||| |||||| ||||||| | ||||||||||||||  ||||||||||||    
T  10924 gaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaaccctcaagagaacctc 11002  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 19142 - 19174
Alignment:
Q  260 gtgtttgcaaatgtttcccaacccaagagaacc 292  Q
    |||||| ||||||||||||||||||||||||||    
T  19142 gtgtttacaaatgtttcccaacccaagagaacc 19174  T

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