View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14985_low_4 (Length: 234)
Name: NF14985_low_4
Description: NF14985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14985_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 49625223 - 49625422
Alignment:
| Q |
19 |
gaaattacaacgtataatgaaagaaatgattgacatgaaacctggtgcatatccagtcaccggatttccagccggggcgagtggaggcaccgccaccagc |
118 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49625223 |
gaaattgcaacgtataatgaaagaaatgattgacatgaaacctggtgcatatccagtcaccggatttccagccggggcgagtggaggcaccgccaccagc |
49625322 |
T |
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| Q |
119 |
gctgcctgctccaaaaccgtatggtgatctcaataatcgtggcatgtctgaggagtcagaggagaaggtatcaatatccttaggggcaccacatttgaag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49625323 |
gctgcctgctccaaaaccgtatggtgatctcaataatcgtggcatgtctgaggagtcagaggagaaggtatcaatatccttaggggcaccacatttgaag |
49625422 |
T |
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