View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14986_high_19 (Length: 317)
Name: NF14986_high_19
Description: NF14986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14986_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 295
Target Start/End: Original strand, 5461313 - 5461595
Alignment:
| Q |
13 |
aaaattatagtgtcgataattttgtcaaacttactgcgatttcaaacatatattttggatcgaaagtaagtttgacaaaatcacgattataaaaactaca |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
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| T |
5461313 |
aaaattatagtgtcgataattttgtcaaacttactgcgatttcaaacatatattttggattgaaagtaagtttgacaaaatcacgatgataaaaactaca |
5461412 |
T |
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| Q |
113 |
ctttaaaattttaacaaaattacagcgttaccgtaaaaaagttatgaaggtcgacttgttttttcatattcgagatcattgacctaataatttactaaga |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5461413 |
ctttaaaattttaacaaaattacagcgttaccgtaaaaaagttatgaaggtagacttgttttttcatattcgagatcattgacctaataatttactaaga |
5461512 |
T |
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| Q |
213 |
atggtgtctgcaaacataccatgagatttccaacaccagccattggaaaatgcaaaggtttgctgatcaagtaatttccacct |
295 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5461513 |
atggtgtctgcaaatataccatgagatttccaacaccagccattggaaaatgcaaaggtttgctgatcaagtaatttccacct |
5461595 |
T |
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