View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14986_high_20 (Length: 314)
Name: NF14986_high_20
Description: NF14986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14986_high_20 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 41 - 300
Target Start/End: Original strand, 2273260 - 2273519
Alignment:
| Q |
41 |
ttacgaagttgacaagttatgagtaaattccattgtaaaacctcaatttagacgcacgcaataccaattgtggtggtcgtgaaccgatcagaagctgacc |
140 |
Q |
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| T |
2273260 |
ttacgaagttgacaagttatgagtaaattccattgtaaaacctcaatttagacgcacgcaataccaattgtggtggtcgtgaaccgatcagaagctgacc |
2273359 |
T |
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| Q |
141 |
ttttaaccaaggaaaagacctcaggtgaaagaacaccaatctcaaattcaggaacttcaggtatagtagaaagaactggtccagacttatcataaaccat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2273360 |
ttttaaccaaggaaaagacctcaggtgaaagaacaccaatctcaaattcaggaacttcaggtatagtagaaagaactggtccagacttatcataaaccat |
2273459 |
T |
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| Q |
241 |
atacaaacactctttggagtatttttcttgcattttgaaactattgctactgctagtgcc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2273460 |
atacaaacactctttggagtatttttcttgcattttgaaactattgctactgctagtgcc |
2273519 |
T |
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