View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14986_high_28 (Length: 223)
Name: NF14986_high_28
Description: NF14986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14986_high_28 |
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Alignment Details
Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 34237411 - 34237593
Alignment:
| Q |
32 |
catgtccaccaaacaaaccatttacatataagaatgaaatcacattgaaggagttagtaggagatcccgaattcaataccaataactaacataactacta |
131 |
Q |
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| T |
34237411 |
catgtccaccaaacaaaccatttacatataagaatgaaatcacattgaaggagttagtaggagatcccgaattcaataccaataactaacataactacta |
34237510 |
T |
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| Q |
132 |
acttactatcatctctgcctat-nnnnnnnncatagagctgctttccatttcgtaaatagaaatatacccgccctttgctact |
213 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
34237511 |
acttactatcatctctgcctataaataaaaacatagagctgctttccatttcgtaaatagaaatatacccgctctttgttact |
34237593 |
T |
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