View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14986_low_13 (Length: 385)
Name: NF14986_low_13
Description: NF14986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14986_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 45406359 - 45405993
Alignment:
| Q |
1 |
aaaccgaaaacatacataaaggaattaaattatagttagaaccaattattgaaaagatttctgatatccacaatccaaattaggtccagtatccacattg |
100 |
Q |
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| T |
45406359 |
aaaccgaaaacatacataaaggaattaaattatagttagaaccaattattgaaaagatttctgatatccacaatccaaattaggtccagtatccacattg |
45406260 |
T |
|
| Q |
101 |
aacaacttagtatatctttgaaaaaatccaattcgatcattcactcttgcatcattaggaattccacattccaatccaccattgactatatttgtcacca |
200 |
Q |
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| T |
45406259 |
aacaacttagtatatctttgaaaaaatccaattcgatcattcactcttgcatcattaggaattccacattccaatccaccattgactatatttgtcacca |
45406160 |
T |
|
| Q |
201 |
atccaaaaccagctgtgcgattagcagctatgtcagcttttgttgccaaatattttccaaccatcacattgtgacaagaaggtattggttttctctctgt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45406159 |
atccaaaaccagctgtgcgattagcagctatgtcagcttttgttgccaaatattttccaaccatcacattgtgacaagaaggtattggttttctctctgt |
45406060 |
T |
|
| Q |
301 |
catccaaaaccatagagcagttttgaaagcaatcactgaattgtttgatacaatctctggattcctc |
367 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45406059 |
catccaaaaccatagagcagttttgaaagcaatcactgaattgtttgatacaatctctggattcctc |
45405993 |
T |
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