View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14986_low_19 (Length: 338)

Name: NF14986_low_19
Description: NF14986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14986_low_19
NF14986_low_19
[»] chr1 (3 HSPs)
chr1 (13-317)||(17583708-17584012)
chr1 (85-317)||(17592585-17592817)
chr1 (11-84)||(17591614-17591688)
[»] chr5 (13 HSPs)
chr5 (13-303)||(28475076-28475367)
chr5 (13-304)||(32763205-32763506)
chr5 (141-297)||(32768344-32768499)
chr5 (140-304)||(25477756-25477920)
chr5 (140-304)||(32557363-32557527)
chr5 (99-299)||(32710546-32710746)
chr5 (149-298)||(32655587-32655736)
chr5 (174-301)||(32651319-32651446)
chr5 (154-285)||(32752167-32752298)
chr5 (241-299)||(32660565-32660623)
chr5 (140-298)||(32748109-32748267)
chr5 (140-246)||(32755696-32755802)
chr5 (148-203)||(32858859-32858914)
[»] chr7 (4 HSPs)
chr7 (144-299)||(37577556-37577711)
chr7 (140-232)||(32895072-32895164)
chr7 (148-304)||(7969388-7969547)
chr7 (26-65)||(37577343-37577382)
[»] chr2 (2 HSPs)
chr2 (26-111)||(16752719-16752805)
chr2 (26-111)||(16757222-16757308)
[»] chr4 (1 HSPs)
chr4 (16-73)||(2166531-2166588)


Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 317
Target Start/End: Original strand, 17583708 - 17584012
Alignment:
Q  13 aaggttgttagtgttttctatttttggatcagttcttgaaatatcaatctcaagttttcttcattgatttagtggcaatttttgtgcagatgcaaatcta 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17583708 aaggctgttagtgttttctatttttggatcagttcttgaaatatcaatctcaagttttcttcattgatttaatggcaatttttgtgcagatgcaaatcta 17583807  T
Q  113 catcaggacccagactcgaaagacataccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgca 212  Q
    ||| |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  17583808 cataaggacccagactggaaagacataccccctgagggtggagagttcagacacgataatgaatgtgaagaagaagattcttgacaaggaagatattgca 17583907  T
Q  213 gtgcaccagcaacgtctgatatttgacggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaaccatccatctttgcc 312  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  17583908 gtgcaccagcaacgtctgatctttgacggtaagcaactagaggacaaccggacccttgccgattacaacatccaagagaagtcaaccattcatctctgcc 17584007  T
Q  313 tccgc 317  Q
    |||||    
T  17584008 tccgc 17584012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 85 - 317
Target Start/End: Original strand, 17592585 - 17592817
Alignment:
Q  85 tggcaatttttgtgcagatgcaaatctacatcaggacccagactcgaaagacataccccctgagggttgagagttcagacacaataatgaatgtgaagaa 184  Q
    |||||||| | |||||||| ||||||||||| | |||||||||| | | ||  ||||| || |||||||| |||||||||||||||||  ||||||||||    
T  17592585 tggcaattgtggtgcagatacaaatctacataatgacccagactagtaggaggtaccctctaagggttgaaagttcagacacaataatcgatgtgaagaa 17592684  T
Q  185 gaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgacggtaagcaactagaggacaatcggacccttgccgattacaacatc 284  Q
    ||||||||||||||||||| ||||| | ||||||||||||||| |||| |||| |||||||  |||||| ||  | |||||||||| |||||||||||||    
T  17592685 gaagattcttgacaaggaaaatatcccggtgcaccagcaacgtttgatctttggcggtaaggtactagatgaggaccggacccttgtcgattacaacatc 17592784  T
Q  285 caagagaagtcaaccatccatctttgcctccgc 317  Q
     |||||||||||||||||||  | |||||||||    
T  17592785 aaagagaagtcaaccatccacgtctgcctccgc 17592817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 17591614 - 17591688
Alignment:
Q  11 caaaggttgttagtgttttctatttttggatcagttcttgaaatatcaatctcaagttttct-tcattgatttag 84  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  17591614 caaaggctgttagtgttttctatttttggatcagttcttgaaatatcaatctcaaattttctattattgatttag 17591688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 303
Target Start/End: Original strand, 28475076 - 28475367
Alignment:
Q  13 aaggttgttagtgttttctatttttggatcagttcttgaaatatcaatctcaagttttcttc-attgatttagtggcaatttttgtgcagatgcaaatct 111  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||  | ||||||| ||| | || | ||||||||||||||||    
T  28475076 aaggttgttagtgttttctatttttggattagttcttgaaatgtcagtctcaaattttcttttactgatttaatggtatttgtggtgcagatgcaaatct 28475175  T
Q  112 acatc-aggacccagactcgaaagacataccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcg 210  Q
    || |  | || |  || | ||||||||   |||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||  |||     
T  28475176 acgtggaagatct-gattggaaagacaattcccctgagggttgagagttcagacacgatagtcgatgtgaagaagaagattcttgacaaggaagggatcc 28475274  T
Q  211 cagtgcaccagcaacgtctgatatttgacggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaaccatcc 303  Q
    || | ||| |||||||||| ||    |||||||||||||||||||||||||  |||||||||  |||||||||||||||||| ||||||||||    
T  28475275 caatacacgagcaacgtctaatcaacgacggtaagcaactagaggacaatcttacccttgccagttacaacatccaagagaactcaaccatcc 28475367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 304
Target Start/End: Original strand, 32763205 - 32763506
Alignment:
Q  13 aaggttgttagtgttttctatttttggatcagttcttgaaatatcaat------ctcaagttttc-ttcattgatttagtggcaatttttgtgcagatgc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||      ||||| ||||| || ||||||||| ||| | || | ||||||||||    
T  32763205 aaggttgttagtgttttctatttttggatcagttcttgaaatatatatatgagtctcaaattttcctttattgatttaatggtatttgtggtgcagatgc 32763304  T
Q  106 aaatctacatcaggacccagactcgaaagacataccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaaga 205  Q
    |||||||| | |    || |||| ||||||    |||| ||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||     
T  32763305 aaatctacgtaaaagacctgactggaaagatgatccccttgagggttgagagttcagacacaatagaaaatgtgaagaaaaagattcttgacaaggaagg 32763404  T
Q  206 tatcgcagtgcaccagcaacgtctgatatt---tgacggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaaccatc 302  Q
     ||| || ||||| |||||||||||||  |    |||||||||||  |||||||||| |  ||||||||| ||||||||||||||||||| |||||||||    
T  32763405 gatcccaatgcacgagcaacgtctgatcatcgacgacggtaagcagttagaggacaaccttacccttgccaattacaacatccaagagaattcaaccatc 32763504  T
Q  303 ca 304  Q
    ||    
T  32763505 ca 32763506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 297
Target Start/End: Original strand, 32768344 - 32768499
Alignment:
Q  141 cccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgacg 240  Q
    |||||||||||| ||| ||||||||| ||| | ||||||||||||||| || || |||||||||  ||| |||| ||||| |||||| ||||||||| ||    
T  32768344 cccctgagggttaagatttcagacacgatagttaatgtgaagaagaagtttttt-acaaggaagggatcccagtacaccaacaacgtttgatatttgccg 32768442  T
Q  241 gtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaa 297  Q
    ||| ||||| ||| |||||   |||||||||| ||| ||||||||||||||||||||    
T  32768443 gtaggcaacgagatgacaacgagacccttgccaattgcaacatccaagagaagtcaa 32768499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 304
Target Start/End: Original strand, 25477756 - 25477920
Alignment:
Q  140 ccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgac 239  Q
    |||| |||||||| ||||||||||||| |||   | ||||||| |||||||| ||||||||||| |   |  |||| || | |||||||||||||||  |    
T  25477756 ccccttgagggttaagagttcagacacgatagacagtgtgaaggagaagatttttgacaaggaaaagtaccaagtgaacgatcaacgtctgatattttcc 25477855  T
Q  240 ggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaaccatcca 304  Q
    |||||||||||||| |||   | |||| ||||| |||||||||||||||||||||||||||||||    
T  25477856 ggtaagcaactagacgactgccagaccattgccaattacaacatccaagagaagtcaaccatcca 25477920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 304
Target Start/End: Complemental strand, 32557527 - 32557363
Alignment:
Q  140 ccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgac 239  Q
    |||| ||| ||| |||||||||||||| |||   ||||||||| | ||||||||||||||||||   ||| |||||||||| ||||||||||| |||| |    
T  32557527 ccccttgaaggtggagagttcagacacgatagcaaatgtgaaggataagattcttgacaaggaaacgatcccagtgcaccaacaacgtctgatgtttgcc 32557428  T
Q  240 ggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaaccatcca 304  Q
      ||||| |||||| ||||  |  ||||||||| |||||||||||||||||||| ||||| ||||    
T  32557427 aataagctactagatgacagccatacccttgcctattacaacatccaagagaaggcaaccctcca 32557363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 299
Target Start/End: Original strand, 32710546 - 32710746
Alignment:
Q  99 cagatgcaaatctacatcaggacccagactcgaaagacataccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgaca 198  Q
    ||||||||||||| ||| | ||||| |||| |||||||   |||||||| ||| ||||||||| ||||||||   ||  |||||  ||||||||  || |    
T  32710546 cagatgcaaatcttcataaagaccctgactggaaagacgatccccctgaaggtggagagttcatacacaatagcaaacttgaaggcgaagattcgagaga 32710645  T
Q  199 aggaagatatcgcagtgcaccagcaacgtctgatatttgacggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaac 298  Q
    |||||   ||| ||||| | |||||| ||||||| |||| | ||||| ||||||  |||  || |||||||||| |||||||||||||||||||||||||    
T  32710646 aggaaagaatcccagtggatcagcaatgtctgatctttgccagtaaggaactagctgactgtcagacccttgccaattacaacatccaagagaagtcaac 32710745  T
Q  299 c 299  Q
    |    
T  32710746 c 32710746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 298
Target Start/End: Complemental strand, 32655736 - 32655587
Alignment:
Q  149 ggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgacggtaagcaa 248  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||  ||||||||||  ||| | |||||| |||| ||||||   ||||   ||||||||    
T  32655736 ggttaagagttcagacacaatactcgatgtgaagaagaagattcaggacaaggaagggatcccggtgcacgagcagcgtctggactttgctagtaagcaa 32655637  T
Q  249 ctagaggacaatcggacccttgccgattacaacatccaagagaagtcaac 298  Q
    |||||| || | |  |||||||||  |||||||||||||||||| |||||    
T  32655636 ctagagaaccaccaaacccttgccagttacaacatccaagagaaatcaac 32655587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 301
Target Start/End: Complemental strand, 32651446 - 32651319
Alignment:
Q  174 aatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgacggtaagcaactagaggacaatcggacccttgccg 273  Q
    ||||||||| |||||||| ||||| ||||| | | | ||||| || | |||||| |||| ||||  ||||| ||||||||||||   |||| ||||||||    
T  32651446 aatgtgaaggagaagattgttgacgaggaaaagaccccagtgtacgaccaacgtttgatctttgctggtaaacaactagaggacggccggatccttgccg 32651347  T
Q  274 attacaacatccaagagaagtcaaccat 301  Q
    |||||| ||||||||| |||||||||||    
T  32651346 attacatcatccaagataagtcaaccat 32651319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 285
Target Start/End: Original strand, 32752167 - 32752298
Alignment:
Q  154 agagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgacggtaagcaactaga 253  Q
    ||||||||||||| ||| |  ||||||||||||| |||| |||||||||||  ||| ||||||||||||| |||||  | ||||||||||||| | || |    
T  32752167 agagttcagacacgatactcgatgtgaagaagaaaattcatgacaaggaagggatcccagtgcaccagcagcgtctattctttgacggtaagccaataaa 32752266  T
Q  254 ggacaatcggacccttgccgattacaacatcc 285  Q
    ||||   | ||| |||||| ||||||||||||    
T  32752267 ggaccgccagactcttgccaattacaacatcc 32752298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 32660623 - 32660565
Alignment:
Q  241 gtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaacc 299  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||    
T  32660623 gtaagcaacttgaggacgattggacccttgccgattacaacatccaagagcagtcaacc 32660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 298
Target Start/End: Original strand, 32748109 - 32748267
Alignment:
Q  140 ccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgac 239  Q
    |||||||| |||| ||||||||||||| ||| | ||||||||||| ||| |||  ||||||||||  ||| | || ||||| ||||||||| | |||  |    
T  32748109 ccccctgatggttaagagttcagacacgatactcaatgtgaagaaaaaggttcaggacaaggaagggatccctgtccaccaacaacgtctgttcttttcc 32748208  T
Q  240 ggtaagcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaac 298  Q
       |||||||||||| ||   | ||||||||||  ||||||||||||||||||||||||    
T  32748209 aagaagcaactagagaaccgccagacccttgccagttacaacatccaagagaagtcaac 32748267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 32755696 - 32755802
Alignment:
Q  140 ccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgac 239  Q
    |||||| | |||| ||||||||||||| ||| || ||||||| ||||| |||| |||||||||||  ||| ||||||||||||| |||||  | ||||||    
T  32755696 ccccctcatggttaagagttcagacacgatactggatgtgaaaaagaaaattcatgacaaggaagggatcccagtgcaccagcagcgtctattctttgac 32755795  T
Q  240 ggtaagc 246  Q
    |||||||    
T  32755796 ggtaagc 32755802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 32858859 - 32858914
Alignment:
Q  148 gggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaa 203  Q
    ||||| ||||||||||||| ||| | ||||||||| ||| ||||||||||||||||    
T  32858859 gggttaagagttcagacacgatagtcaatgtgaaggagatgattcttgacaaggaa 32858914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 299
Target Start/End: Original strand, 37577556 - 37577711
Alignment:
Q  144 ctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgatatttgacggta 243  Q
    |||||| || ||||||||||||| |||    |||||||| |||||||||||||||| ||||  ||| || ||||   |||||||||||| |||| |||||    
T  37577556 ctgaggattaagagttcagacacgatagccgatgtgaaggagaagattcttgacaatgaagggatcccaatgcatatgcaacgtctgatctttgccggta 37577655  T
Q  244 agcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaacc 299  Q
    || |||||||  | |  | |||||||||| ||||| ||||||||||||||||||||    
T  37577656 aggaactagataatagcctgacccttgccaattaccacatccaagagaagtcaacc 37577711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 32895072 - 32895164
Alignment:
Q  140 ccccctgagggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaaggaagatatcgcagtgcaccagcaacgtctgat 232  Q
    |||||||| |||| ||||||||||||  ||| | ||||| | | ||||||||||||| |||||||||||| |||||||| | ||| |||||||    
T  32895072 ccccctgatggttaagagttcagacaggatattcaatgtaatggagaagattcttgagaaggaagatatcccagtgcacaatcaatgtctgat 32895164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 304
Target Start/End: Complemental strand, 7969547 - 7969388
Alignment:
Q  148 gggttgagagttcagacacaataatgaatgtgaagaagaagattcttgacaagga---agatatcgcagtgcaccagcaacgtctgatatttgacggtaa 244  Q
    ||||| |||||||||||||||||   ||||||||| |||||||| | |||||| |   ||||  |  ||| |||  |||||||||||| |||| | ||||    
T  7969547 gggttaagagttcagacacaataggcaatgtgaaggagaagattttcgacaagaataaagattaccaagtacacgtgcaacgtctgatctttgccagtaa 7969448  T
Q  245 gcaactagaggacaatcggacccttgccgattacaacatccaagagaagtcaaccatcca 304  Q
    |||| |||| ||||  | |||| ||||| ||| |||||||||||||| ||||||| ||||    
T  7969447 gcaattagatgacagcctgaccattgccaattgcaacatccaagagaggtcaaccctcca 7969388  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 37577343 - 37577382
Alignment:
Q  26 ttttctatttttggatcagttcttgaaatatcaatctcaa 65  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  37577343 ttttctatttttggattagttcttgaaatatcagtctcaa 37577382  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 16752719 - 16752805
Alignment:
Q  26 ttttctatttttggatcagttcttgaaatatcaatctcaagttttc-ttcattgatttagtggcaatttttgtgcagatgcaaatct 111  Q
    ||||||| |||| || ||| ||||||||||||| |||||| ||||| || ||||||||| || ||||| | ||||||||||||||||    
T  16752719 ttttctaattttagaccagctcttgaaatatcagtctcaaattttcttttattgatttaatgtcaattgtggtgcagatgcaaatct 16752805  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 16757222 - 16757308
Alignment:
Q  26 ttttctatttttggatcagttcttgaaatatcaatctcaagttttc-ttcattgatttagtggcaatttttgtgcagatgcaaatct 111  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||| || ||||||||| || ||| | | |||||||||| |||||    
T  16757222 ttttctaattttggaccagttcttgaaatatcagtctcaatttttcttttattgatttaatgtcaactgtggtgcagatgcgaatct 16757308  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 2166588 - 2166531
Alignment:
Q  16 gttgttagtgttttctatttttggatcagttcttgaaatatcaatctcaagttttctt 73  Q
    ||||||| |||||||||||||||| |||||  |||| |||||| |||||| |||||||    
T  2166588 gttgttattgttttctatttttggctcagtcattgatatatcagtctcaaattttctt 2166531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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