View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14986_low_25 (Length: 272)
Name: NF14986_low_25
Description: NF14986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14986_low_25 |
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Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 30352494 - 30352253
Alignment:
| Q |
16 |
cgaggaaaccaagcagatcacgaaaaacatcctcgcccaaaagctaacacagacttacaagtctacaaac-----atcaaaagcttgtcacacttccacn |
110 |
Q |
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| T |
30352494 |
cgaggaaaccaagcagaacacgaaaaacatcctcgcccaaaagctaacccagacttacaagtctacaaactcaacatcaaaagcttgtcacacttccaca |
30352395 |
T |
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| Q |
111 |
nnnnnnnnnncacaacaagacctccaccaggaggccgcctaagataaaacttcttattccacctctagaaaacaatgattcatctccccaatacatcgac |
210 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30352394 |
aaaaaaaa--cacaacaagacctccaccaggaggccgcctgagataaaacttcttattccacctctagaaaacaatgattcatctccccaatacatcgac |
30352297 |
T |
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| Q |
211 |
aaggactccaagaccattcataaaacaaaaaatggggcatattc |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30352296 |
aaggactccaagaccattcataaaacaaaaaatggggcatattc |
30352253 |
T |
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