View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_high_12 (Length: 653)
Name: NF1498_high_12
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 601; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 601; E-Value: 0
Query Start/End: Original strand, 20 - 640
Target Start/End: Original strand, 32687504 - 32688124
Alignment:
| Q |
20 |
tggtgctccattatatcccatattagaatcaccagcattatctccattagctgcacgcccagctgcactagctcgagcttcccatgcttgaagactgcca |
119 |
Q |
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| T |
32687504 |
tggtgctccattatatcccatattagaatcaccagcattatctccattagctgcacgcccagctgcactagctcgagcttcccatgcttgaagactgcca |
32687603 |
T |
|
| Q |
120 |
aattctggaacaggcaagtcttttacccgaccaatttggtctattaaaggcttgagttgtacctgaactagcacaagaggtacaacagtcatagcatgca |
219 |
Q |
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| T |
32687604 |
aattctggaacaggcaagtcttttacccgaccaatttggtctattaaaggcttgagttgtacctgaactagcacaagaggtacaacagtcatagcatgca |
32687703 |
T |
|
| Q |
220 |
aatcaaattgtgggtcagaagctacaaaaagtaaatgccgtcagtgtgtaaactttagcaatttatcatgaaaataagaggagataaatgataccttcat |
319 |
Q |
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| T |
32687704 |
aatcaaattgtgggtcagaagctacaaaaagtaaaggccgtcagtgtgtaaactttagcaatttatcatgaaaataagaggagataaatgataccttcat |
32687803 |
T |
|
| Q |
320 |
tcatgtttgttttaaacagtgagtacagtcagtagacttgtaaaccagcccaaagtttacagttctactgagtacatgccccaacaaaatctgattagat |
419 |
Q |
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| T |
32687804 |
tcatgtttgttttaaacagtgagtacagtcagtaggcttgtaaaccagcccaaagtttacagttctgctgagtacatgccccaacaaaatctgattagat |
32687903 |
T |
|
| Q |
420 |
tacatatacttctttttagtaaaaatgattacttgcgtgaactaatacactgggttaaaacccataatattgttgacctccagtaaattttatggatgta |
519 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32687904 |
tacatatacttctttttagtaaaaatgattacttgcgtgaactaatacactgggttaaaacccataatattgttgacctccagtaaattttatggatgta |
32688003 |
T |
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| Q |
520 |
ttagattgacggcttaattgcacatctccacgttggagctggttgagagcaagattgccaagtttcaacttttctgtatcgtcttggttcactgatcgca |
619 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32688004 |
ctagattgacggcttaattgcacatttccacgttggagctggttgagagcaagattgccaagtttcaacttttctgtatcgtcttggttcactgatcgca |
32688103 |
T |
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| Q |
620 |
tatgtttggggatagttgatg |
640 |
Q |
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| T |
32688104 |
tatgtttggggatagttgatg |
32688124 |
T |
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