View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_high_137 (Length: 331)
Name: NF1498_high_137
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_high_137 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 24 - 316
Target Start/End: Original strand, 3085137 - 3085430
Alignment:
| Q |
24 |
tcagctgaacagcaatggagggagatcaaacataagcatggccatagccagccctacaccaaaaactaccacgcaagagtgtacacttgatgtctcagcc |
123 |
Q |
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| T |
3085137 |
tcagccgaacagcaatggagggagatcaaacataagaatagccataggcagccctacaccaaaaactaccacgcaagagtgtacacttgatgtctcagcc |
3085236 |
T |
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| Q |
124 |
caacactaaccccacgggaaaagaatggacaaaagccaccccttttcatcttcttaaacaatcttttgggttccaagtctactcataaaaaga--caggg |
221 |
Q |
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|| |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
3085237 |
cagcactaaccccacgggaaa-gaatggacaaaaaccaccccttttcatctccttaaacaatcttttgggttccaagtctactcataaaaagagacaggg |
3085335 |
T |
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| Q |
222 |
atctattttcaatctactttaactccaatatgccattatcgaacttttatctcttccactatttcatcaatcgttcgcaccctattgtgatgaat |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3085336 |
atctattttcaatctactttaactccaatatgccattatcgaacttttatctcttccactatttcatcaatcgttcgcaccctattgtgatgaat |
3085430 |
T |
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