View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1498_high_151 (Length: 312)

Name: NF1498_high_151
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1498_high_151
NF1498_high_151
[»] chr6 (5 HSPs)
chr6 (16-295)||(7634531-7634810)
chr6 (214-274)||(34547-34607)
chr6 (85-133)||(7805069-7805117)
chr6 (222-274)||(9357614-9357665)
chr6 (188-271)||(30031439-30031522)
[»] chr1 (8 HSPs)
chr1 (214-297)||(8796366-8796449)
chr1 (188-257)||(25715342-25715411)
chr1 (214-273)||(48865749-48865808)
chr1 (219-273)||(51812690-51812744)
chr1 (185-250)||(26113452-26113517)
chr1 (184-257)||(28090706-28090779)
chr1 (177-258)||(39896759-39896840)
chr1 (238-298)||(52633238-52633298)
[»] chr4 (6 HSPs)
chr4 (189-295)||(24787149-24787255)
chr4 (189-295)||(24821006-24821112)
chr4 (215-257)||(56439614-56439656)
chr4 (222-257)||(28280167-28280202)
chr4 (214-274)||(30480303-30480363)
chr4 (214-274)||(34233066-34233126)
[»] chr7 (4 HSPs)
chr7 (184-250)||(33871476-33871542)
chr7 (214-257)||(47796194-47796237)
chr7 (214-298)||(36101819-36101903)
chr7 (222-254)||(45054353-45054385)
[»] chr8 (2 HSPs)
chr8 (214-274)||(43904707-43904767)
chr8 (214-274)||(29520829-29520889)
[»] chr5 (3 HSPs)
chr5 (214-257)||(6889190-6889233)
chr5 (214-260)||(11675724-11675770)
chr5 (184-257)||(18855804-18855877)
[»] chr3 (7 HSPs)
chr3 (214-297)||(45289133-45289216)
chr3 (195-273)||(41842546-41842624)
chr3 (183-252)||(17022683-17022752)
chr3 (196-297)||(52678874-52678975)
chr3 (214-298)||(19758043-19758127)
chr3 (193-297)||(23534591-23534695)
chr3 (214-274)||(29601072-29601132)
[»] chr2 (2 HSPs)
chr2 (217-274)||(36650622-36650679)
chr2 (214-274)||(19336935-19336995)
[»] scaffold0024 (1 HSPs)
scaffold0024 (214-262)||(48158-48206)


Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 7634810 - 7634531
Alignment:
Q  16 acataacatgtgaaaatctggtatgatataacatggatttaacgataactttaaaatgaacaatatctgacgtttgatttaagaaagtggacacaagtct 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7634810 acataacatgtgaaaatctggtatgatataacatggatttaacgataactttaaaatgaacaatatctgacgtttgatttaagaaagtggacacaagtct 7634711  T
Q  116 agtctattccaacaagagttcaattgtcctacgttaagacatgacactatccaaattcgttaacaattaagtcttattccactaaatgagctcgatttca 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |    
T  7634710 agtctattccaacaagagttcaattgtcctacattaagacatgacactatccaaattcgttaacaattaagttttattccactaaattagctcgatttta 7634611  T
Q  216 tggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagt 295  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7634610 tggatcaaattacgctataatgttctatcataaactatatttaaatctaattcattaacatgtaagtatttcataatagt 7634531  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 34547 - 34607
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||| |||| || ||||||||    
T  34547 catggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaat 34607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 7805069 - 7805117
Alignment:
Q  85 acgtttgatttaagaaagtggacacaagtctagtctattccaacaagag 133  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||||||    
T  7805069 acgtttgattgaagaaaatggactcaaatctagtctattccaacaagag 7805117  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 9357614 - 9357665
Alignment:
Q  222 aaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||| ||||||    
T  9357614 aaattacgatataatattctatcataaaccatatttaaat-taatttattaat 9357665  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 30031522 - 30031439
Alignment:
Q  188 cttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatatttaaatctaattcatt 271  Q
    ||||| ||||||| |||| |||  | ||||||| ||||||||| ||| | ||||||||||||| ||||||||||| || |||||    
T  30031522 cttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcatt 30031439  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 8796449 - 8796366
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagttt 297  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||| |||| || |||||||||| ||  | |||| |||||||||    
T  8796449 catggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaatatctagatctttcttaatagttt 8796366  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 25715342 - 25715411
Alignment:
Q  188 cttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatattt 257  Q
    ||||| ||||||| |||| |||  | ||||||| ||||||||| ||||||||||||||||||| ||||||    
T  25715342 cttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatattt 25715411  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 48865749 - 48865808
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaa 273  Q
    ||||||| ||||||| | ||||||||||||||||||| |||| |  ||||||||||||||    
T  48865749 catggatcaaattacaccataatattctatcataaaccatatctggatctaattcattaa 48865808  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 51812744 - 51812690
Alignment:
Q  219 attaaattacgctataatattctatcataaactatatttaaatctaattcattaa 273  Q
    |||||||||||  ||||||||||||||||||| ||||||  |||||| |||||||    
T  51812744 attaaattacggcataatattctatcataaaccatatttcgatctaactcattaa 51812690  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 26113452 - 26113517
Alignment:
Q  185 agtcttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaac 250  Q
    |||||||| ||||||| ||||||||  | ||||||| |||||| || ||||| |||||||||||||    
T  26113452 agtcttatcccactaagtgagctcggctacatggatcaaattaagccataatgttctatcataaac 26113517  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 28090706 - 28090779
Alignment:
Q  184 aagtcttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatattt 257  Q
    ||||||||| ||||||| || | |||  | ||||||| ||||||||| ||||| ||||||||||||| ||||||    
T  28090706 aagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatattt 28090779  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 39896840 - 39896759
Alignment:
Q  177 aacaattaagtcttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatattta 258  Q
    |||||| ||| ||||| ||| | |||||| |||| | |||| |||||||||||| ||||| || |||||||||| |||||||    
T  39896840 aacaatcaagccttatgccatttaatgaggtcgactacatgaattaaattacgccataatgttatatcataaaccatattta 39896759  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 52633238 - 52633298
Alignment:
Q  238 ttctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagtttt 298  Q
    ||||||||||||| ||||||| ||  ||||||||||| | ||| | |||||||||||||||    
T  52633238 ttctatcataaaccatatttatatacaattcattaatctataaatctttcataatagtttt 52633298  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 24787255 - 24787149
Alignment:
Q  189 ttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttca 288  Q
    ||||| || |||||||| ||| || ||||||| |||||||||||||||||||||| ||||   ||||||  ||| ||||||||||| | ||| | |||||    
T  24787255 ttatttcattaaatgaggtcggttacatggatcaaattacgctataatattctattataataaatatttgcatcaaattcattaatgtctaaatttttca 24787156  T
Q  289 taatagt 295  Q
    |||||||    
T  24787155 taatagt 24787149  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 24821006 - 24821112
Alignment:
Q  189 ttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttca 288  Q
    ||||| || |||||||| ||| || ||||||| |||||||||||||||||||||| ||||   ||||||  ||| ||||||||||| | ||| | |||||    
T  24821006 ttatttcattaaatgaggtcggttacatggatcaaattacgctataatattctattataataaatatttgcatcaaattcattaatgtctaaatttttca 24821105  T
Q  289 taatagt 295  Q
    |||||||    
T  24821106 taatagt 24821112  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 56439614 - 56439656
Alignment:
Q  215 atggattaaattacgctataatattctatcataaactatattt 257  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  56439614 atggattaaattacgctataatgttctatcataaaccatattt 56439656  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 28280167 - 28280202
Alignment:
Q  222 aaattacgctataatattctatcataaactatattt 257  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28280167 aaattacactataatattctatcataaactatattt 28280202  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 30480363 - 30480303
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| ||||||||  |||| |||||||||||||| |||||| | || |||||||||||    
T  30480363 catggatcaaattacgtcataaaattctatcataaaccatattttagtccaattcattaat 30480303  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 34233066 - 34233126
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| ||||||||||| ||| |||||||||||||  |||||  |||||| ||||||||    
T  34233066 catggatcaaattacgctacaatgttctatcataaaccttattttgatctaactcattaat 34233126  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 33871542 - 33871476
Alignment:
Q  184 aagtcttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaac 250  Q
    ||||||||| ||||||| || |||| ||| ||||||| ||||||||| ||||| |||||||||||||    
T  33871542 aagtcttatcccactaactgggctcaattacatggatgaaattacgccataatgttctatcataaac 33871476  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 47796194 - 47796237
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatattt 257  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||    
T  47796194 catggatcaaattacgccataatattctatcataaaccatattt 47796237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 36101819 - 36101903
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagtttt 298  Q
    ||||||| ||||||||  ||||| ||||||||||||| ||||||  ||| || |||||||| | ||| | |||||||||| ||||    
T  36101819 catggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcattaatctataaatctttcataataatttt 36101903  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 45054353 - 45054385
Alignment:
Q  222 aaattacgctataatattctatcataaactata 254  Q
    ||||||||| |||||||||||||||||||||||    
T  45054353 aaattacgccataatattctatcataaactata 45054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 43904707 - 43904767
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||||||| ||| || ||||||||    
T  43904707 catggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaat 43904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 29520889 - 29520829
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||||||  ||| || ||||||||    
T  29520889 catggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaat 29520829  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 6889233 - 6889190
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatattt 257  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  6889233 catggattaaattacgccataatgttctatcataaaccatattt 6889190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 11675770 - 11675724
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaa 260  Q
    ||||||||||| ||||| ||||| ||||||||||||| |||||||||    
T  11675770 catggattaaactacgccataatgttctatcataaaccatatttaaa 11675724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 18855877 - 18855804
Alignment:
Q  184 aagtcttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatattt 257  Q
    ||||||||| ||||||| || | |||  | ||||||| |||||| |||||||| ||||||||||||| ||||||    
T  18855877 aagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatattt 18855804  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 45289133 - 45289216
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagttt 297  Q
    ||||||| |||||| |||||||| ||||||||||||| ||||||  ||| || |||||||| | ||| | |||| |||||||||    
T  45289133 catggatcaaattatgctataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcctaatagttt 45289216  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 41842546 - 41842624
Alignment:
Q  195 cactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatatttaaatctaattcattaa 273  Q
    ||||||||||| | || | ||||||| ||||||| | ||||| |||||||| |||| |||||| ||||||| |||||||    
T  41842546 cactaaatgaggttgactacatggatcaaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaa 41842624  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 17022683 - 17022752
Alignment:
Q  183 taagtcttattccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaacta 252  Q
    |||| ||||| |||||||||||| |||  | |||| ||||||| || | |||||||||||||||||||||    
T  17022683 taagccttatcccactaaatgaggtcggctacatgaattaaatgacaccataatattctatcataaacta 17022752  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 52678874 - 52678975
Alignment:
Q  196 actaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagt 295  Q
    |||||||||| | || | ||||||| |||||||||||||||||| |||||| ||  |||||| |||  || |||||||  | ||| | ||||||||||||    
T  52678874 actaaatgaggttgactgcatggatcaaattacgctataatattatatcatgaatcatatttgaattcaactcattaacctctaaatctttcataatagt 52678973  T
Q  296 tt 297  Q
    ||    
T  52678974 tt 52678975  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 19758127 - 19758043
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataatagtttt 298  Q
    ||||||| ||||||  | ||||| ||||||||||||| ||||| | ||| || |||||||| | ||| |||||| ||||||||||    
T  19758127 catggatcaaattataccataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttt 19758043  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 297
Target Start/End: Original strand, 23534591 - 23534695
Alignment:
Q  193 tccactaaatgagctcgatttcatggattaaattacgctataatattctatcataaactatatttaaatctaattcattaatatgtaagtatttcataat 292  Q
    ||||| || |||| |||| | ||||||| ||||||||| ||||| ||||||||||||  |||||  | || || |||||||| | ||||| |||| ||||    
T  23534591 tccacaaagtgaggtcgactacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaat 23534690  T
Q  293 agttt 297  Q
    |||||    
T  23534691 agttt 23534695  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 29601132 - 29601072
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| |||||||   ||||| |||||||||||||||||||| |||| || ||||||||    
T  29601132 catggatcaaattacatcataatgttctatcataaactatatttgaatccaactcattaat 29601072  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 36650679 - 36650622
Alignment:
Q  217 ggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    |||| |||||||| |||| | ||||||||||||||||||||  |||||| ||||||||    
T  36650679 ggatcaaattacgttatagtgttctatcataaactatattttgatctaactcattaat 36650622  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 19336935 - 19336995
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatctaattcattaat 274  Q
    ||||||| ||||||||| ||||| ||||||||||||| ||||||  ||| || ||||||||    
T  19336935 catggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcattaat 19336995  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 48158 - 48206
Alignment:
Q  214 catggattaaattacgctataatattctatcataaactatatttaaatc 262  Q
    ||||||| ||||||||| |||||||||||||||| || |||||| ||||    
T  48158 catggatcaaattacgccataatattctatcatacaccatatttgaatc 48206  T

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