View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_high_250 (Length: 238)
Name: NF1498_high_250
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_high_250 |
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Alignment Details
Target: chr6 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 35209402 - 35209576
Alignment:
| Q |
1 |
tttcctaaatatattaaatgagagtcatcccgtaccctgctttcccaattttaaaatatgccacccccgctatccaggacagacaacatagagtgatcat |
100 |
Q |
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| T |
35209402 |
tttcctaaatatattaaatgagagtcatcccgtaccctgctttcccaattttaaaatatgccacccccgctatccaggacagacaacatagagtgatcat |
35209501 |
T |
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| Q |
101 |
atatcgcaaaataacattgatgtttatggttgaaaatacgtcccacaaaattggtagtgtatcaaaacatttagc |
175 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35209502 |
atatcgcaaaataacagtgatgtttatggttgaaaatacgtcccacaaaattggtagtgtatcaaaacatttagc |
35209576 |
T |
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