View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_high_73 (Length: 410)
Name: NF1498_high_73
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_high_73 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 158 - 397
Target Start/End: Original strand, 34051466 - 34051705
Alignment:
| Q |
158 |
ggatataagaaatagaaaaacaatttgtttatcaagtccaatattaatagccttgaaagtagttcatgcatcttacgtttaagtaatatgtattcagctc |
257 |
Q |
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| T |
34051466 |
ggatataagaaatagaaaaacaatttgtttatcaagtccaatattaatagccttgaaagtagttcatgcatcttacgtttaagtaatatgtattcagctc |
34051565 |
T |
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| Q |
258 |
ttcacccaattaatgtatttacttcctattgtagatagttgcttgctagttgatagtctcttaggccatatgtctatatgaaattgctatggatataggc |
357 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34051566 |
ttcacccaattaatgtatttacttcctattgtagatagttgcttgctagttgatagtctcttaggccatatgtctatatgaaattgctatggatataggc |
34051665 |
T |
|
| Q |
358 |
atttataaacttcaaaagaacaataaatctgtcaaagctt |
397 |
Q |
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| T |
34051666 |
atttataaacttcaaaagaacaataaatctatcaaagctt |
34051705 |
T |
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