View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_low_192 (Length: 281)
Name: NF1498_low_192
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_low_192 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 961908 - 962133
Alignment:
| Q |
16 |
atgaaagaaaacatacttaaaggaacaaaaatgtaatttaactattaatatgaaatgaaagaagtattattaaaccagtcttctaaaatatacttatatt |
115 |
Q |
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| T |
961908 |
atgaaagaaaacatacttaaaggaacaaaaatgtaatttaactattaatatgaaacgaaagaagtattattaaaccagtcttctaaaatatacttatatt |
962007 |
T |
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| Q |
116 |
atattattatcaaattctgaattatcta----cgtgcatgcatgcattaactttactctcaatttgcatgcacctggaattagaagcatttatatcctta |
211 |
Q |
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| T |
962008 |
atattattatcaaattctgaattatctatgtgcatgcatgcatgcattaactttactctcaatttgcatgtacctggaattagaaggatt--tatcctta |
962105 |
T |
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| Q |
212 |
catttcaaatttcaaatatagtacattc |
239 |
Q |
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| T |
962106 |
catttcaaatttcaaatatagtacattc |
962133 |
T |
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