View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_low_203 (Length: 270)
Name: NF1498_low_203
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_low_203 |
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Alignment Details
Target: chr2 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 8018035 - 8018133
Alignment:
| Q |
18 |
tgccatttttaacaatccaagtagcaaagagaacttacaaagaagaagaatgaacagaaacaacattttcagcttctttataccctcaaattcagtagt |
116 |
Q |
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| T |
8018035 |
tgccatttttaacaatccaagtagcaaagagaacttacaaagaagaagaatgaacagaaacaacattttcagcttctttataccctcaaattcagtagt |
8018133 |
T |
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Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 8018197 - 8018287
Alignment:
| Q |
180 |
ctagcataatagtatcatcagatcacttttgaagaaggttcaaaagtgagtgagtggggactattgcagtaatagctgtatgtagagagag |
270 |
Q |
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| T |
8018197 |
ctagcataatagtatcatcagatcacttttgaagaaggttcaaaagtgagtgagtggggactattgcagtaatagctgtatgtagagagag |
8018287 |
T |
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