View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1498_low_248 (Length: 243)

Name: NF1498_low_248
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1498_low_248
NF1498_low_248
[»] chr5 (58 HSPs)
chr5 (15-243)||(14980010-14980237)
chr5 (66-230)||(43257832-43257998)
chr5 (59-243)||(166608-166803)
chr5 (15-243)||(36660382-36660619)
chr5 (59-243)||(31889741-31889913)
chr5 (59-243)||(4011619-4011790)
chr5 (147-243)||(4967450-4967546)
chr5 (59-242)||(31557300-31557489)
chr5 (59-243)||(7388151-7388335)
chr5 (59-243)||(34919752-34919929)
chr5 (115-242)||(12167570-12167700)
chr5 (62-230)||(16886087-16886250)
chr5 (66-243)||(36783361-36783549)
chr5 (59-190)||(42329556-42329700)
chr5 (66-243)||(15400177-15400366)
chr5 (59-231)||(39059805-39059987)
chr5 (14-127)||(793692-793805)
chr5 (59-230)||(4751502-4751685)
chr5 (18-230)||(33693698-33693911)
chr5 (59-230)||(4742238-4742421)
chr5 (14-127)||(29653600-29653713)
chr5 (59-219)||(27810345-27810517)
chr5 (59-127)||(13066712-13066780)
chr5 (59-127)||(4371362-4371430)
chr5 (59-127)||(38982231-38982299)
chr5 (59-190)||(34171163-34171304)
chr5 (59-124)||(33585064-33585129)
chr5 (59-127)||(4833719-4833787)
chr5 (15-127)||(17674163-17674275)
chr5 (63-190)||(33822513-33822653)
chr5 (137-211)||(27652310-27652384)
chr5 (137-226)||(8961011-8961099)
chr5 (59-127)||(12992063-12992129)
chr5 (62-123)||(32690821-32690882)
chr5 (22-127)||(32963095-32963197)
chr5 (59-126)||(33741464-33741531)
chr5 (62-121)||(41845374-41845433)
chr5 (145-242)||(1513075-1513172)
chr5 (66-127)||(28640088-28640149)
chr5 (59-103)||(27658682-27658726)
chr5 (145-190)||(793616-793661)
chr5 (59-122)||(36296225-36296286)
chr5 (59-109)||(7731697-7731747)
chr5 (137-211)||(33584964-33585038)
chr5 (62-107)||(8961117-8961162)
chr5 (190-243)||(24436499-24436552)
chr5 (140-189)||(29044811-29044860)
chr5 (138-190)||(36296144-36296196)
chr5 (59-102)||(12167693-12167736)
chr5 (59-106)||(28316712-28316759)
chr5 (66-105)||(29051620-29051659)
chr5 (58-88)||(24436585-24436615)
chr5 (145-179)||(38982168-38982202)
chr5 (190-242)||(4371491-4371543)
chr5 (170-230)||(8755591-8755651)
chr5 (178-230)||(17674329-17674381)
chr5 (152-188)||(29653526-29653562)
chr5 (143-179)||(41566878-41566914)
[»] chr3 (73 HSPs)
chr3 (24-243)||(26965467-26965688)
chr3 (60-230)||(27483165-27483337)
chr3 (59-243)||(2567971-2568157)
chr3 (58-242)||(19552538-19552725)
chr3 (59-243)||(37225554-37225749)
chr3 (58-243)||(34059874-34060059)
chr3 (15-243)||(647551-647789)
chr3 (22-242)||(790058-790265)
chr3 (59-230)||(25061703-25061874)
chr3 (58-242)||(36771536-36771722)
chr3 (66-231)||(1340900-1341067)
chr3 (59-243)||(44648369-44648555)
chr3 (67-242)||(40048900-40049067)
chr3 (59-242)||(46362970-46363165)
chr3 (60-242)||(53716029-53716196)
chr3 (60-242)||(38457460-38457653)
chr3 (15-243)||(43580430-43580673)
chr3 (59-230)||(83295-83476)
chr3 (64-243)||(35239390-35239555)
chr3 (66-243)||(31290933-31291111)
chr3 (59-211)||(54933194-54933359)
chr3 (59-235)||(44854314-44854499)
chr3 (137-230)||(2662464-2662557)
chr3 (18-230)||(42740190-42740403)
chr3 (58-177)||(43599855-43599976)
chr3 (59-127)||(2988696-2988763)
chr3 (151-243)||(38165620-38165712)
chr3 (15-124)||(43169289-43169398)
chr3 (62-190)||(44645340-44645481)
chr3 (15-211)||(25722450-25722659)
chr3 (66-226)||(41287082-41287255)
chr3 (80-230)||(9167661-9167810)
chr3 (66-242)||(45095559-45095723)
chr3 (137-242)||(5244673-5244777)
chr3 (58-127)||(32303991-32304060)
chr3 (15-109)||(13485909-13486003)
chr3 (59-124)||(22730924-22730989)
chr3 (59-211)||(43687872-43688040)
chr3 (149-230)||(43736842-43736922)
chr3 (59-190)||(51381720-51381867)
chr3 (59-211)||(54261414-54261579)
chr3 (66-230)||(4476334-4476498)
chr3 (59-211)||(27027732-27027899)
chr3 (137-242)||(27039415-27039519)
chr3 (59-243)||(20512453-20512651)
chr3 (61-126)||(35099453-35099518)
chr3 (59-124)||(36310339-36310404)
chr3 (137-190)||(53560754-53560807)
chr3 (58-242)||(4391902-4392088)
chr3 (62-243)||(22414757-22414947)
chr3 (62-240)||(43600152-43600341)
chr3 (59-179)||(3000751-3000883)
chr3 (62-127)||(36541493-36541558)
chr3 (60-124)||(42857148-42857212)
chr3 (64-127)||(52222831-52222892)
chr3 (59-122)||(49470788-49470851)
chr3 (67-109)||(15514830-15514872)
chr3 (157-243)||(22731040-22731125)
chr3 (72-121)||(38165733-38165783)
chr3 (59-121)||(52202383-52202445)
chr3 (145-190)||(2988620-2988665)
chr3 (137-190)||(43169424-43169477)
chr3 (12-122)||(53560617-53560726)
chr3 (59-123)||(50420258-50420321)
chr3 (58-127)||(5244584-5244652)
chr3 (145-190)||(42007072-42007117)
chr3 (62-121)||(42791330-42791388)
chr3 (179-230)||(43599520-43599571)
chr3 (145-179)||(16240672-16240706)
chr3 (142-175)||(15514752-15514785)
chr3 (145-190)||(32303915-32303960)
chr3 (137-190)||(36541581-36541634)
chr3 (15-47)||(47895253-47895285)
[»] chr4 (66 HSPs)
chr4 (17-243)||(52732552-52732781)
chr4 (58-242)||(43421087-43421273)
chr4 (83-243)||(34360033-34360195)
chr4 (59-230)||(15501129-15501302)
chr4 (20-242)||(51930556-51930765)
chr4 (15-243)||(21045108-21045323)
chr4 (21-240)||(50072238-50072438)
chr4 (66-242)||(54512034-54512212)
chr4 (59-242)||(44855237-44855433)
chr4 (15-242)||(31817162-31817375)
chr4 (59-243)||(32140948-32141119)
chr4 (22-243)||(45520420-45520651)
chr4 (59-230)||(37445655-37445837)
chr4 (59-243)||(36805412-36805600)
chr4 (59-242)||(19849079-19849273)
chr4 (59-243)||(39671068-39671238)
chr4 (59-211)||(24259606-24259771)
chr4 (148-243)||(56422961-56423056)
chr4 (58-243)||(30022062-30022257)
chr4 (59-230)||(22212336-22212518)
chr4 (59-190)||(31941553-31941697)
chr4 (59-128)||(6462004-6462073)
chr4 (137-230)||(34096100-34096193)
chr4 (66-179)||(31987306-31987430)
chr4 (62-126)||(28116243-28116307)
chr4 (15-127)||(29840026-29840139)
chr4 (59-214)||(35928486-35928650)
chr4 (59-243)||(56556241-56556410)
chr4 (59-124)||(19282501-19282567)
chr4 (59-188)||(17499732-17499874)
chr4 (145-230)||(42672481-42672566)
chr4 (58-190)||(47321138-47321284)
chr4 (21-127)||(51434346-51434452)
chr4 (15-211)||(34124246-34124455)
chr4 (68-127)||(30492732-30492791)
chr4 (59-190)||(45889559-45889702)
chr4 (62-243)||(45903378-45903559)
chr4 (62-243)||(11835105-11835294)
chr4 (137-189)||(54233902-54233954)
chr4 (59-180)||(32141163-32141280)
chr4 (137-243)||(3093433-3093538)
chr4 (58-127)||(6510112-6510181)
chr4 (60-109)||(17317950-17317999)
chr4 (58-179)||(38692408-38692516)
chr4 (59-106)||(1868208-1868255)
chr4 (58-109)||(6232141-6232192)
chr4 (137-211)||(4408169-4408243)
chr4 (133-243)||(38761788-38761898)
chr4 (137-241)||(29289852-29289959)
chr4 (71-127)||(44835341-44835398)
chr4 (158-242)||(51737285-51737367)
chr4 (62-119)||(54233844-54233900)
chr4 (59-127)||(54091953-54092021)
chr4 (59-109)||(6231652-6231702)
chr4 (66-124)||(29289982-29290040)
chr4 (59-108)||(4408286-4408335)
chr4 (59-127)||(34096010-34096079)
chr4 (145-190)||(51434270-51434315)
chr4 (61-126)||(55126494-55126559)
chr4 (59-127)||(55548313-55548380)
chr4 (139-190)||(6462102-6462153)
chr4 (140-190)||(28116334-28116384)
chr4 (152-242)||(30492828-30492909)
chr4 (139-184)||(34534111-34534157)
chr4 (145-190)||(55126591-55126636)
chr4 (14-50)||(51434169-51434205)
[»] chr2 (45 HSPs)
chr2 (22-231)||(29795170-29795381)
chr2 (82-243)||(40410473-40410636)
chr2 (66-230)||(40987254-40987418)
chr2 (59-242)||(4840687-4840881)
chr2 (59-227)||(1381748-1381916)
chr2 (61-235)||(7743401-7743586)
chr2 (62-243)||(1298739-1298931)
chr2 (60-230)||(4766184-4766341)
chr2 (8-230)||(4536521-4536742)
chr2 (66-231)||(14378219-14378371)
chr2 (64-230)||(36360347-36360522)
chr2 (59-243)||(34225771-34225943)
chr2 (137-241)||(43460860-43460961)
chr2 (58-234)||(24775186-24775373)
chr2 (15-127)||(33093322-33093434)
chr2 (15-211)||(43388648-43388855)
chr2 (62-204)||(16316710-16316863)
chr2 (26-230)||(42969864-42970069)
chr2 (85-242)||(37106886-37107056)
chr2 (15-127)||(10580944-10581055)
chr2 (59-190)||(14698010-14698130)
chr2 (59-230)||(43344195-43344375)
chr2 (59-127)||(1360175-1360243)
chr2 (59-127)||(2459771-2459839)
chr2 (59-127)||(18374850-18374918)
chr2 (59-190)||(41984416-41984561)
chr2 (59-127)||(775972-776039)
chr2 (15-127)||(25332525-25332636)
chr2 (66-124)||(39866762-39866820)
chr2 (146-242)||(11171839-11171935)
chr2 (60-127)||(14511459-14511526)
chr2 (59-110)||(45148055-45148106)
chr2 (145-211)||(775875-775941)
chr2 (137-211)||(4566112-4566186)
chr2 (59-109)||(6591963-6592013)
chr2 (20-103)||(19505936-19506018)
chr2 (193-243)||(44228609-44228659)
chr2 (137-190)||(2459862-2459915)
chr2 (145-190)||(25332667-25332712)
chr2 (59-100)||(45372645-45372686)
chr2 (80-127)||(43460792-43460839)
chr2 (145-179)||(1360272-1360306)
chr2 (73-122)||(4566214-4566263)
chr2 (145-189)||(10580869-10580913)
chr2 (138-190)||(33093458-33093510)
[»] chr7 (52 HSPs)
chr7 (59-242)||(28044101-28044286)
chr7 (58-243)||(36447570-36447757)
chr7 (59-242)||(32275203-32275388)
chr7 (58-240)||(18886667-18886836)
chr7 (65-243)||(22627313-22627495)
chr7 (10-243)||(42121500-42121736)
chr7 (15-243)||(17869192-17869431)
chr7 (58-243)||(41905894-41906089)
chr7 (69-243)||(34002091-34002277)
chr7 (15-213)||(40207379-40207576)
chr7 (58-243)||(33056243-33056433)
chr7 (59-243)||(3680882-3681077)
chr7 (134-240)||(34733394-34733500)
chr7 (15-230)||(40298802-40299019)
chr7 (58-243)||(1103482-1103678)
chr7 (59-230)||(42259521-42259702)
chr7 (15-127)||(43813431-43813543)
chr7 (59-211)||(26963478-26963643)
chr7 (21-127)||(22597191-22597297)
chr7 (59-190)||(19906413-19906555)
chr7 (66-243)||(26527357-26527544)
chr7 (59-124)||(30514972-30515037)
chr7 (58-211)||(32345825-32345991)
chr7 (19-124)||(36836018-36836123)
chr7 (15-127)||(42044066-42044178)
chr7 (62-127)||(19288434-19288499)
chr7 (59-127)||(31416838-31416906)
chr7 (22-109)||(18733415-18733502)
chr7 (66-127)||(19920358-19920419)
chr7 (145-224)||(42010553-42010632)
chr7 (59-188)||(36447083-36447225)
chr7 (64-211)||(39117479-39117638)
chr7 (63-127)||(5723006-5723069)
chr7 (58-126)||(10684918-10684986)
chr7 (137-211)||(10684820-10684894)
chr7 (137-230)||(48838652-48838750)
chr7 (15-121)||(29001634-29001740)
chr7 (58-109)||(32873268-32873319)
chr7 (66-231)||(30833066-30833241)
chr7 (137-190)||(6521907-6521960)
chr7 (137-190)||(19277057-19277110)
chr7 (138-211)||(47272240-47272313)
chr7 (137-189)||(31416763-31416815)
chr7 (134-230)||(33845391-33845478)
chr7 (12-109)||(40804977-40805073)
chr7 (137-188)||(36836148-36836199)
chr7 (134-177)||(18733540-18733583)
chr7 (58-97)||(42753705-42753744)
chr7 (137-175)||(5723090-5723128)
chr7 (135-189)||(29001577-29001631)
chr7 (66-123)||(47271731-47271789)
chr7 (200-241)||(32873127-32873168)
[»] chr1 (63 HSPs)
chr1 (59-243)||(48259822-48260008)
chr1 (62-242)||(40060866-40061048)
chr1 (59-243)||(11650056-11650251)
chr1 (59-243)||(24040983-24041155)
chr1 (15-243)||(84477-84692)
chr1 (21-243)||(5317536-5317769)
chr1 (59-242)||(43929683-43929876)
chr1 (60-243)||(1430495-1430666)
chr1 (137-243)||(52403563-52403669)
chr1 (20-189)||(44582791-44582973)
chr1 (60-242)||(1428865-1429059)
chr1 (14-242)||(50349817-50350057)
chr1 (62-230)||(17919793-17919971)
chr1 (22-243)||(28751367-28751600)
chr1 (59-230)||(12002244-12002426)
chr1 (60-230)||(37437375-37437549)
chr1 (70-242)||(10690915-10691074)
chr1 (104-235)||(30006182-30006315)
chr1 (59-190)||(38132202-38132322)
chr1 (15-211)||(2458962-2459167)
chr1 (134-242)||(6332251-6332359)
chr1 (145-242)||(43105562-43105659)
chr1 (59-190)||(26252116-26252260)
chr1 (59-204)||(22664937-22665091)
chr1 (59-187)||(254926-255068)
chr1 (59-127)||(12851739-12851807)
chr1 (58-242)||(44583769-44583963)
chr1 (21-185)||(17806392-17806567)
chr1 (62-127)||(45377236-45377301)
chr1 (59-226)||(15698726-15698905)
chr1 (24-209)||(43755016-43755187)
chr1 (147-231)||(45749470-45749554)
chr1 (59-222)||(48319981-48320144)
chr1 (15-127)||(44024499-44024611)
chr1 (66-243)||(2245791-2245981)
chr1 (62-211)||(49894807-49894943)
chr1 (62-243)||(50158277-50158458)
chr1 (66-230)||(40719020-40719195)
chr1 (58-188)||(5854238-5854381)
chr1 (59-121)||(26582923-26582985)
chr1 (59-127)||(28200310-28200379)
chr1 (137-189)||(9552368-9552420)
chr1 (59-107)||(9552436-9552484)
chr1 (59-126)||(15647150-15647215)
chr1 (59-123)||(43738344-43738408)
chr1 (60-127)||(11134548-11134614)
chr1 (61-124)||(42650339-42650402)
chr1 (137-190)||(42650261-42650314)
chr1 (67-127)||(52403482-52403542)
chr1 (137-183)||(672300-672346)
chr1 (20-83)||(672397-672460)
chr1 (145-187)||(35149394-35149436)
chr1 (59-109)||(35149485-35149535)
chr1 (64-121)||(50591388-50591446)
chr1 (59-123)||(6332164-6332229)
chr1 (145-190)||(28200234-28200279)
chr1 (145-242)||(43738214-43738311)
chr1 (59-121)||(9333105-9333168)
chr1 (59-121)||(9356878-9356941)
chr1 (22-102)||(43105692-43105772)
chr1 (145-179)||(12851836-12851870)
chr1 (15-82)||(50249264-50249331)
chr1 (139-211)||(50591309-50591381)
[»] scaffold0072 (1 HSPs)
scaffold0072 (66-243)||(12041-12219)
[»] chr8 (59 HSPs)
chr8 (15-243)||(7612452-7612690)
chr8 (22-188)||(1774085-1774251)
chr8 (15-230)||(22601090-22601315)
chr8 (59-219)||(29931224-29931386)
chr8 (58-242)||(27109780-27109976)
chr8 (58-243)||(45187255-45187440)
chr8 (14-243)||(9022348-9022589)
chr8 (62-211)||(16208951-16209102)
chr8 (22-243)||(38329014-38329221)
chr8 (60-230)||(30788934-30789115)
chr8 (59-243)||(36915365-36915558)
chr8 (64-190)||(34168224-34168355)
chr8 (138-243)||(2067788-2067893)
chr8 (22-243)||(7129262-7129475)
chr8 (59-243)||(6839215-6839400)
chr8 (62-213)||(18666534-18666672)
chr8 (59-190)||(8471279-8471399)
chr8 (64-243)||(32326684-32326875)
chr8 (59-211)||(14541737-14541900)
chr8 (18-230)||(41414799-41415012)
chr8 (59-179)||(156239-156358)
chr8 (58-180)||(2803268-2803393)
chr8 (137-243)||(11335998-11336098)
chr8 (61-127)||(34461670-34461737)
chr8 (143-243)||(32737859-32737958)
chr8 (63-230)||(41790113-41790268)
chr8 (66-188)||(26438980-26439102)
chr8 (61-127)||(3095590-3095656)
chr8 (181-243)||(24732079-24732141)
chr8 (59-124)||(5588563-5588628)
chr8 (59-242)||(11257540-11257731)
chr8 (31-124)||(33870724-33870817)
chr8 (62-127)||(27416502-27416565)
chr8 (66-127)||(8382564-8382625)
chr8 (59-127)||(39970323-39970390)
chr8 (69-180)||(8107191-8107304)
chr8 (59-121)||(35052469-35052531)
chr8 (66-127)||(32661310-32661371)
chr8 (25-122)||(32061515-32061612)
chr8 (59-127)||(42946120-42946188)
chr8 (157-243)||(5588427-5588512)
chr8 (66-124)||(18673189-18673247)
chr8 (189-242)||(2812915-2812968)
chr8 (62-119)||(13108989-13109045)
chr8 (140-190)||(27416593-27416643)
chr8 (145-243)||(42709949-42710046)
chr8 (68-109)||(2812817-2812858)
chr8 (137-190)||(13109076-13109129)
chr8 (137-230)||(39970412-39970496)
chr8 (139-211)||(5044218-5044290)
chr8 (137-189)||(34461595-34461647)
chr8 (59-102)||(3203325-3203368)
chr8 (137-180)||(35052560-35052603)
chr8 (66-109)||(43938125-43938168)
chr8 (63-109)||(2067725-2067770)
chr8 (58-88)||(11335839-11335869)
chr8 (193-242)||(32061419-32061468)
chr8 (190-242)||(3095473-3095525)
chr8 (15-47)||(11165482-11165514)
[»] chr6 (30 HSPs)
chr6 (15-242)||(1924634-1924862)
chr6 (59-230)||(12828653-12828835)
chr6 (64-243)||(26669057-26669247)
chr6 (59-242)||(29915539-29915735)
chr6 (59-243)||(29927205-29927401)
chr6 (59-230)||(31275613-31275796)
chr6 (60-242)||(23936543-23936735)
chr6 (15-243)||(32258676-32258906)
chr6 (19-242)||(34439368-34439607)
chr6 (59-127)||(4123941-4124009)
chr6 (59-127)||(11785189-11785255)
chr6 (59-190)||(17345146-17345290)
chr6 (59-124)||(6143082-6143147)
chr6 (59-127)||(4132061-4132129)
chr6 (22-127)||(26189469-26189574)
chr6 (59-127)||(34576542-34576610)
chr6 (59-124)||(6140598-6140662)
chr6 (59-203)||(10494760-10494916)
chr6 (58-127)||(30627088-30627157)
chr6 (32-127)||(8052316-8052410)
chr6 (64-109)||(3015919-3015964)
chr6 (59-110)||(30626867-30626918)
chr6 (137-188)||(34576633-34576684)
chr6 (139-242)||(4131908-4132008)
chr6 (58-122)||(19689927-19689989)
chr6 (155-190)||(6992508-6992543)
chr6 (140-190)||(26189600-26189651)
chr6 (59-89)||(19416857-19416887)
chr6 (191-240)||(19689809-19689858)
chr6 (137-190)||(25932718-25932771)
[»] scaffold0119 (1 HSPs)
scaffold0119 (64-243)||(1546-1736)
[»] scaffold0047 (1 HSPs)
scaffold0047 (59-190)||(70465-70609)
[»] scaffold0580 (4 HSPs)
scaffold0580 (165-243)||(1689-1767)
scaffold0580 (165-243)||(9428-9506)
scaffold0580 (15-109)||(1595-1691)
scaffold0580 (15-109)||(9334-9430)
[»] scaffold0886 (1 HSPs)
scaffold0886 (59-242)||(4068-4263)
[»] scaffold0238 (1 HSPs)
scaffold0238 (66-242)||(16000-16186)
[»] scaffold0189 (2 HSPs)
scaffold0189 (22-127)||(13145-13250)
scaffold0189 (145-180)||(13081-13116)
[»] scaffold0003 (2 HSPs)
scaffold0003 (59-127)||(321724-321792)
scaffold0003 (137-190)||(321815-321868)
[»] scaffold0194 (1 HSPs)
scaffold0194 (59-243)||(8156-8342)
[»] scaffold0007 (1 HSPs)
scaffold0007 (137-179)||(158187-158229)
[»] scaffold0519 (1 HSPs)
scaffold0519 (59-122)||(7791-7852)
[»] scaffold0060 (1 HSPs)
scaffold0060 (59-103)||(31623-31667)


Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 14980237 - 14980010
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||| ||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980237 tactccctccgtttcaaaatgagagtcactttagctaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 14980138  T
Q  115 caactttaccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatc 214  Q
    ||||||||||||| ||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980137 caactttaccctctccaactttt-tctcacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatc 14980039  T
Q  215 caatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||| |||||||||||    
T  14980038 caatgattatttcattccatttcttaatc 14980010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 43257998 - 43257832
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatct--tttctcacataattttcaatgcaacttta 163  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||  || ||  ||||||||| |||||||||||||||||||    
T  43257998 aaaatgaatgtcactttacatttccaatataactttaatttttttctttcaactttatcctcttcaactgttttctcacacaattttcaatgcaacttta 43257899  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    | ||||||| |||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||    
T  43257898 agtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttcatt 43257832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 166803 - 166608
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------cccca--tcttttctcacataat 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         | |||  | |||||||||| |||    
T  166803 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 166704  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||| |||||||||||| |||||   ||||||||||| ||||||||||||| || |||||||||||||||  ||| |||||||    
T  166703 tttcaatgcaactttaagtttgtctttttcatataatacaagggcagtttagtaaaagtgttatttctaatgattatttcatttcattccttaatc 166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 36660382 - 36660619
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||| ||||| |||||||||||||||||| ||        |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  36660382 tactcccttcgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttc 36660481  T
Q  115 caactttaccct---------ccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaag 205  Q
    ||||||||||||         | ||| |||||||| || ||||||  || ||||||||| ||||||||||||||||||||||||| || ||| |||||||    
T  36660482 caactttaccctcaataaatactccagcttttctctcacaattttttatacaactttaagtttgtctttttcttataaagtaaggacattttagtaaaag 36660581  T
Q  206 tgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||| || |||||||||||||||  ||| |||||||    
T  36660582 tgttatgtctaatgattatttcatttcattccttaatc 36660619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 31889741 - 31889913
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcctt-ccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||| |             ||||||| |||||||||||||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaatttttttttttccaacttttc-------------tctcacacaattttcaatgca 31889827  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||||||||||||||||||||||||| || |||  ||||||| |||| |||||||||||| |||||||||||    
T  31889828 actttaattttgtctttttcttataaagtaagggcagtttagtgaaaacgttatattcaataattatttcattccatttcttaatc 31889913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 4011790 - 4011619
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||             ||||||||| ||||||||||||||    
T  4011790 ttgttttaaaatgaacgtcactttacatttccgatacaactttaatttttttcttccaacttt-------------tttctcacacaattttcaatgcaa 4011704  T
Q  159 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||| ||||||||||||||| |||||||| ||| | ||||  |||||||||||||||||||| |||| |||||||||||    
T  4011703 ctttaattttatctttttcttataaaataagggcattttagaaaaaacgttatatccaatgattatttgattccatttcttaatc 4011619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 4967546 - 4967450
Alignment:
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatc 4967450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 31557489 - 31557300
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca-----tcttttctcacataattttcaa 153  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||   ||   |     | || ||||||| |||||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatactattctctcacacaattttcaa 31557390  T
Q  154 tgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||| ||||||||||||||||||||| |||||  ||||  ||||||| ||||||  |||||||||||||||| ||||||||||    
T  31557389 tgcaactttaagtttgtctttttcttataaagtaaagggttgtttactaaaagtattatatttaatgattatttcattctatttcttaat 31557300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 7388335 - 7388151
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    |||||| |||||||||||||||||| |||| |||||||| ||||||||||  |||||| ||||| ||||  || |||||||| || ||||||||||||||    
T  7388335 ttgttttaaaatgaatgtcactttatattttcaatacaattttaatttttatcttccatctttatcctcttcaacttttctctcacaattttcaatgcaa 7388236  T
Q  159 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||| ||| ||||||||||||||| ||||| || ||| |||||| | |||| || ||||||||||| |||  |||| ||||||    
T  7388235 ctttaaatttatctttttcttataaaataaggacaatttagtaaaaatattatgtctaatgattattttatttcatttattaatc 7388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 34919752 - 34919929
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||| || |||| || |||||||| || |||| | ||         
T  34919752 ttgtttcaaaatgaatgtcactttacattcctaatataactttaatttttttcttccaacttgactctcctcaacttttctctcacaattattaa----- 34919846  T
Q  159 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
      |||| |||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||||| |||  ||| |||||||    
T  34919847 --ttaagtttgtctttttcttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaatc 34919929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 12167700 - 12167570
Alignment:
Q  115 caactttaccctccccatcttttctcacata---attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||| ||| |||||||| || |   ||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||| |    
T  12167700 caactttaccctctccaacttttctctcacacaaattttcaatgcaactttaagtttgaccttttcttataaagtaagggcagtttagtaaaagtgtttt 12167601  T
Q  212 atccaatgattatttcattcaatttcttaat 242  Q
     || |||||||||||||||||||||||||||    
T  12167600 gtctaatgattatttcattcaatttcttaat 12167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 16886087 - 16886250
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttc--tcacataattttcaatgcaac 159  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||  ||||| |||||||||||||||    
T  16886087 tttcaaaatgaacgtcgctttgcattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctatcacacaattttcaatgcaac 16886186  T
Q  160 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||        |||| |||||||||||||||||||| ||||| ||||||  || ||| |||||||||||    
T  16886187 tttaa-------gttttgttataaagtaagggcagtttagtaaatgtgttacgtctaataattatttcatt 16886250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 36783361 - 36783549
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acataattttcaat 154  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||         | ||| ||||||||  ||| ||||||||||    
T  36783361 aaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctctcacacaattttcaat 36783460  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||| |||||||||||| ||  ||||||||||| ||| |||||| |||||| || |||||||||||||||  || ||||||||    
T  36783461 gcaactttaaatttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatttcatttcatctcttaatc 36783549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 42329700 - 42329556
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |  || ||||    ||||||| |    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctcacaca 42329601  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  42329600 attttcaatgcaactttaagtttgtcttattcttataaagtaagg 42329556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 15400177 - 15400366
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacat--aattttcaat 154  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||         | | | |||||||| |||  ||||| ||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttttctctcatacaatttccaat 15400276  T
Q  155 gcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    | |||||||| |||  |||||||||||||||| ||||| | ||| |||||||||||||||| ||| ||||||||||||||||| ||||||    
T  15400277 gaaactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattatttcattcaattttttaatc 15400366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 39059805 - 39059987
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc-----------cccatcttttctcacataat 147  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||| ||||||||||||           |  || |||||||| | |||    
T  39059805 ttgtttcaaaatgaatgttgctttacattttcaatacaactttaattttttc-ttctaactttaccctcaataaatactccaaattttttctcatacaat 39059903  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 231  Q
    ||||||||||||||||| ||||| |||||| ||||||  ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  39059904 tttcaatgcaactttaagtttgtttttttcatataaaacaagggtagtttagtaaaagtgttatgtctaatgattatttcattc 39059987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 793805 - 793692
Alignment:
Q  14 ctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcctt 113  Q
    ||||||| ||| ||| |||||||||||| ||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  793805 ctacttcttccatttcaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttctt 793706  T
Q  114 ccaactttaccctc 127  Q
    |||||| |||||||    
T  793705 ccaactctaccctc 793692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 4751685 - 4751502
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccct---------cccca--tcttttctcacataa 146  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||         | |||  | |||||||||| ||    
T  4751685 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4751586  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||| ||||||||| ||||| |||||| ||||||  |||||  |||| ||||||||||||| || |||||||||||||||    
T  4751585 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctaatgattatttcatt 4751502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 33693698 - 33693911
Alignment:
Q  18 ttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaa 117  Q
    ||||||| ||||||||| |||||| ||||| ||       ||| ||| ||||| |||||||||||||||||  ||||  ||||||||||||| |||||||    
T  33693698 ttcctccattttaaaataagtgtctctttagccaaaaatatttattttaaaataaatgtcactttacatttttaatatcactttaatttttttcttccaa 33693797  T
Q  118 ctttaccctcccca--tcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcc 215  Q
     |||||| ||| ||  | |||||||||| ||||||||||||||||||||  || |  |||| ||||||| ||||||||| || ||||||||||||  ||     
T  33693798 ttttaccttcctcaacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtct 33693896  T
Q  216 aatgattatttcatt 230  Q
    |||||||||||||||    
T  33693897 aatgattatttcatt 33693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 4742421 - 4742238
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccct---------cccca--tcttttctcacataa 146  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||         | |||  | |||||||||| ||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4742322  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||| ||||||||| ||||| |||||| ||||||  |||||  |||| ||||||||||||| ||  ||||||||||||||    
T  4742321 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctgatgattatttcatt 4742238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 29653713 - 29653600
Alignment:
Q  14 ctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcctt 113  Q
    ||||| ||||||||||||||||||||||  ||||||         ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||    
T  29653713 ctactccctccgttttaaaatgagtgtcgttttaacaaaaaaaaattgttgcaaaatgaatgtcattttacatttccaatacaactttaatttttttctt 29653614  T
Q  114 ccaactttaccctc 127  Q
    ||||||||||||||    
T  29653613 ccaactttaccctc 29653600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 219
Target Start/End: Original strand, 27810345 - 27810517
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------ccca---tcttttctcacataat 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||        | ||   | |||||||||| |||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttttttctcacacaat 27810444  T
Q  148 tttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 219  Q
    ||||||| ||||||||| ||| || |||||| ||||||  || |||||||| ||||||||||||||| |||||    
T  27810445 tttcaatacaactttaaatttatcttttttcatataaaacaatggcagtttagtaaaagtgttatatgcaatg 27810517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 13066712 - 13066780
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctc 13066780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 4371362 - 4371430
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaatttttttctccaaactttaccctc 4371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 38982299 - 38982231
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  38982299 ttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttctcccaactttaccctc 38982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 34171163 - 34171304
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------ccca---tcttttctcacataat 147  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| ||        | ||   | || ||||||| |||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttt-tttccaactttaccttcaataaatactcaaacttttctctcacagaat 34171261  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  34171262 tttcaatgcaactttaagtttgtcttgttcttataaagtaagg 34171304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 33585129 - 33585064
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  33585129 ttgttttaaaatgaacgtcactttacattttcaatacaactttaatttttttcttccaactttacc 33585064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 4833787 - 4833719
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||  |||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  4833787 ttgtttcaaaatgaatgttgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 4833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 17674163 - 17674275
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||||||||||||||||||||||  |        |||||||||||||||||||||||||| ||| ||||| |||||||||||||| | ||    
T  17674163 tactccctccgttttaaaatgagtgtcactttagtcaaataaaattgtttcaaaatgaatgtcactttacgttttcaataaaactttaattttttacgtc 17674262  T
Q  115 caactttaccctc 127  Q
     ||||||| ||||    
T  17674263 taactttatcctc 17674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 33822653 - 33822513
Alignment:
Q  63 ttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacataattt 149  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||||| |         |  || ||||    ||||||| |||||    
T  33822653 ttcaaaatgaatgtcactttacattttcaatacaactttaattttgttctttcaactttaccttcaataaatacttcaacttttctctctcacacaattt 33822554  T
Q  150 tcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  33822553 tcaatgcaactttaagtttgtcttgttcttataaagtaagg 33822513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 27652384 - 27652310
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  27652384 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagtaaaattgttat 27652310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 8961099 - 8961011
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattattt 226  Q
    ||||||| |||||||| ||||||||||| ||| ||||||||||||||| ||| | |||||| ||||||||||||| || |||||||||||    
T  8961099 tctcacacaattttcattgcaactttaaatttatctttttcttataaaataa-gacagtttagtaaaagtgttatgtctaatgattattt 8961011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 12992063 - 12992129
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||| ||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaatttttt--ttccaactttatcctc 12992129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 32690882 - 32690821
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 123  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||    
T  32690882 tttcaaaatgaatgtcactttacatttcaaatacaactttaatttttttctctcaactttac 32690821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 32963197 - 32963095
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||||||||||||||||||||||  |       |||||||||||||||||  |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  32963197 tccgttttaaaatgagtgtcactttagtcaaaaag-tttgtttcaaaatgaataccactttacatttccaatacaactttattttttt--ttcaaacttt 32963101  T
Q  122 accctc 127  Q
    ||||||    
T  32963100 accctc 32963095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 33741464 - 33741531
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 126  Q
    ||||||||| |||||||||||||||||||| |||| ||||||| ||||||| |||| |||||||||||    
T  33741464 ttgtttcaatatgaatgtcactttacattttcaatgcaactttcatttttttcttcaaactttaccct 33741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 41845433 - 41845374
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||    
T  41845433 tttcaaaatgaatgtcactttacattttcaatacaattttaatttttttctttcaacttt 41845374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 1513075 - 1513172
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||| |||||||||| ||||| ||| |||| ||||||||||| ||||||  |||||| |||| |  |||||||||||||||  ||||||||||    
T  1513075 aattttcaaagcaactttaagtttgtttttctcttgtaaagtaagggtagtttgaaaaaagtattatgtttaatgattatttcatttcatttcttaat 1513172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 28640088 - 28640149
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||    
T  28640088 aaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctc 28640149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 793661 - 793616
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  793661 aattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 793616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 36296286 - 36296225
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 122  Q
    |||||| ||||||||| || |||| ||||||||||||||||||||||||||  |||||||||||    
T  36296286 ttgttttaaaatgaatatcgctttccatttccaatacaactttaatttttt--ttccaacttta 36296225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 7731747 - 7731697
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||||| |||||||||||||||||| |||| ||| ||||||||||||||||    
T  7731747 ttgttttaaaatgaatgtcactttatattttcaaaacaactttaatttttt 7731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 33585038 - 33584964
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||| |||||||||||||||||||| |||||||| ||| | ||||||||||  | ||| |||||| ||||||    
T  33585038 tctcacacaattttcaatgcaactttaagtttgtcttgttcatgtaaagtaaggttattttagtaaaattgttat 33584964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 8961162 - 8961117
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaatttt 107  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  8961162 tttcaaaatggatgtcactttacaattccaatgcaactttaatttt 8961117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24436552 - 24436499
Alignment:
Q  190 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||| |||||||||||||||||||| |||||||||||||||  ||| |||||||    
T  24436552 ggcattttggtaaaagtgttatatctaatgattatttcattttattccttaatc 24436499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 29044811 - 29044860
Alignment:
Q  140 cacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    |||| |||||||||||||||||||| ||| |||| |||||||||||||||    
T  29044811 cacacaattttcaatgcaactttaagtttatcttattcttataaagtaag 29044860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 36296196 - 36296144
Alignment:
Q  138 ctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||| |||||||||||||||||||| |||||||| ||| |||||| |||||    
T  36296196 ctcacacaattttcaatgcaactttaagtttgtcttgttcctataaattaagg 36296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 12167736 - 12167693
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaacttta 102  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  12167736 ttgttttaaaatgaatgtcactctacattttcaatacaacttta 12167693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 28316712 - 28316759
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattt 106  Q
    |||||||||||| ||||||| |||| |||| |||||||||||||||||    
T  28316712 ttgtttcaaaataaatgtcattttatattttcaatacaactttaattt 28316759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 29051659 - 29051620
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaatt 105  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  29051659 aaaatgaatgtcactttacctttctaatacaactttaatt 29051620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 88
Target Start/End: Complemental strand, 24436615 - 24436585
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacattt 88  Q
    |||||||||||||||||||||||||||||||    
T  24436615 tttgtttcaaaatgaatgtcactttacattt 24436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 38982202 - 38982168
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttctt 179  Q
    |||||||||||||||||||| ||||||||||||||    
T  38982202 aattttcaatgcaactttaagtttgtctttttctt 38982168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 4371491 - 4371543
Alignment:
Q  190 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||| ||||||||| ||| || |||||||||||||||| ||| ||||||    
T  4371491 ggcagtttagtaaaagtgctatgtctaatgattatttcattccattccttaat 4371543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 8755651 - 8755591
Alignment:
Q  170 tctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||||  |||| ||||||  |||||||||||| ||  ||||||||||||||    
T  8755651 tctttttcttataaaaaaaggacagtttaataaaagtgttatgtctgatgattatttcatt 8755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 17674329 - 17674381
Alignment:
Q  178 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||||||||||||||||  ||||| |||||| |  |||||||||||||||    
T  17674329 ttataaagtaagggcagtttaataaaaatgttatgtttaatgattatttcatt 17674381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 29653562 - 29653526
Alignment:
Q  152 aatgcaactttaattttgtctttttcttataaagtaa 188  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  29653562 aatgcaactttaagtttgtcttgttcttataaagtaa 29653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 41566878 - 41566914
Alignment:
Q  143 ataattttcaatgcaactttaattttgtctttttctt 179  Q
    |||||||||||||||||||||| |||||| |||||||    
T  41566878 ataattttcaatgcaactttaagtttgtcattttctt 41566914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 24 - 243
Target Start/End: Complemental strand, 26965688 - 26965467
Alignment:
Q  24 cgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 123  Q
    |||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  26965688 cgttttaaaatgagtgtcactttagccaaaaaatattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttac 26965589  T
Q  124 cctccccatcttttctc--acataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 221  Q
    |||| ||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  26965588 cctctccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgat 26965489  T
Q  222 tatttcattcaatttcttaatc 243  Q
    |||||||||  |||||||||||    
T  26965488 tatttcattttatttcttaatc 26965467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 230
Target Start/End: Complemental strand, 27483337 - 27483165
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||  |||||||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacataattttcaatgca 27483238  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||    
T  27483237 actttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgattatttcatt 27483165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 2568157 - 2567971
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca--tcttttctcacataattttcaatgc 156  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||  | |  | || ||||||| ||||||||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaatttttttcttccaactttaccctttctaatttttctctcacacaattttcaatgc 2568058  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  2568057 aactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattatttcattcaattccttaatc 2567971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 19552538 - 19552725
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatg 155  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | | ||||  ||||||| |||||||||||    
T  19552538 tttgttttaaaatgaatgtcactttacattttcaatacaactttaaattttttcttccaactttaccctctctaacttttctctcacagaattttcaatg 19552637  T
Q  156 caactttaattttgtctttttcttataaagtaagggcagtttggt-aaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||||| ||||||||||||||||||| |||||| || ||||  ||||||||||||||||||||||||  ||||||||||    
T  19552638 caactttaattttgtatttttcttataaagtaaggacagtttagtaaaaaacgttatatccaatgattatttcatttcatttcttaat 19552725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 37225749 - 37225554
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataat 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||          | | ||||||||  ||| |||    
T  37225749 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattcttttcttccaactttaccctcaataaatacgctaacttttctctcacacaat 37225650  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||  |||||||||||    
T  37225649 tttcaatgcaactttaattttgtctttttcttataaagtaaggacagtttagtaaaagtattatatccaatgattatttcattgtatttcttaatc 37225554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 34059874 - 34060059
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatg 155  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||| ||| ||||  |||| || |||||||||||    
T  34059874 tttgttttaaaatgaatgtcattttacattttcaatacaactttaatttttttctttcaactttaccctctccaacttttctctcgcacaattttcaatg 34059973  T
Q  156 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||  ||||||||||||||||||||||||| ||||| ||||||   ||||||||||| |||||||||||| |||||||||||    
T  34059974 caactttaa--ttgtctttttcttataaagtaagggtagtttagtaaaaactttatatccaattattatttcattccatttcttaatc 34060059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 647789 - 647551
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||||||||||||||||       ||||||| ||||||| | ||| ||||||||| |||||||||||||||||||| ||||    
T  647789 tactccctccgtttcaaaatgagtgtcactttaaccaaaaaaatttgtttaaaaatga-tatcattttacattttcaatacaactttaatttttttcttc 647691  T
Q  115 caactttaccctcc---------ccatcttttctc--acataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaa 203  Q
    |||||||||||||          | | ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  647690 caactttaccctcaataaatactctaacttttctcttacagaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaa 647591  T
Q  204 agtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    | ||||||||| |||||||||||||||  |||||||||||    
T  647590 actgttatatctaatgattatttcatttcatttcttaatc 647551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 242
Target Start/End: Original strand, 790058 - 790265
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||| |||||||||||| ||||||||       ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  790058 tccgtttcaaaatgagtgtccctttaaccaaaaaaatttgtttcaaaattaatgtcactttacatttccaatacaactttaatttttttcttcaaacttt 790157  T
Q  122 accctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 221  Q
     |             ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  790158 tc-------------tctcacacaatttccaatgcaactttaattttgactttttcttataaagtaagggcagtttagtaaaagcgttatattcaatgat 790244  T
Q  222 tatttcattcaatttcttaat 242  Q
    |||||||||  ||||||||||    
T  790245 tatttcattacatttcttaat 790265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 25061703 - 25061874
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacat--aattttcaatgc 156  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| ||| ||| |||||||| |||  ||||||||||||    
T  25061703 ttgttttaaaatgaatgccactttacatttccaatacaactttaatttttttctcccaactttactctctccaacttttctctcatacaattttcaatgc 25061802  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||| ||||  |||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||    
T  25061803 aactttaagtttg--tttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatt 25061874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 36771722 - 36771536
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatg 155  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| |||| ||| ||||||||  ||| |||||||||||    
T  36771722 tttgttttaaaatgaatgtcactttacatttacaatacaactttaattttttactttcaactttatcctctccaacttttctctcacacaattttcaatg 36771623  T
Q  156 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| |||||| | |||| || ||| |||||||||||  ||||||||||    
T  36771622 caactttaagtttgtctttttcttataaaataagagcagtttagtaaaaatattatgtctaataattatttcattatatttcttaat 36771536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 1341067 - 1340900
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgcaacttta 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||| ||||||||  ||| |||||||||||||||||||    
T  1341067 aaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacgttaccctctccaacttttctctcacacaattttcaatgcaacttta 1340968  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 231  Q
    | ||||||||||||||||||||||| | || ||| | ||||||||||| || ||| ||||||||||||    
T  1340967 agtttgtctttttcttataaagtaaagacactttagaaaaagtgttatgtctaattattatttcattc 1340900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 44648555 - 44648369
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca--tcttttctcacataattttcaatgc 156  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||| |||  | |||||||||| |||||||||| |    
T  44648555 ttgttttaaaatgaatgtcactttacatttccaatacaacttt-attttttttttccaactttactctctccaacttttttctcacacaattttcaattc 44648457  T
Q  157 aactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| |||||| ||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||||||  ||| |||||||    
T  44648456 aactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatc 44648369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 40048900 - 40049067
Alignment:
Q  67 aaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactttaatt 166  Q
    |||||||||||||||||||||||||        |||||||||| |||||| |||||||||| ||| |||||||| ||||||||||||||||||||||| |    
T  40048900 aaatgaatgtcactttacatttcca--------ttaatttttttcttccagctttaccctctccaacttttctctcataattttcaatgcaactttaaat 40048991  T
Q  167 ttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||||||||||| |||| |||  |||||||||||| || |||||||||||||||| ||| ||||||    
T  40048992 ttgtctttttcttataaagtaaaggcaatttaataaaagtgttatgtctaatgattatttcattccattccttaat 40049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 46363165 - 46362970
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctcc---------ccatcttttctc--acataa 146  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||          ||| ||||||||  ||| ||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 46363066  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||| |||||| |||||| |||||  || |||||||||||||||||||| ||||||    
T  46363065 tttacaatgcaactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgttaggtctaatgattatttcattcaattccttaat 46362970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 53716029 - 53716196
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaac 159  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |             ||||||| | |||||||||||||    
T  53716029 tgttttaaaatgaatgttactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacagttttcaatgcaac 53716115  T
Q  160 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||  ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||  ||||||||||    
T  53716116 tttaatt--gtctttttcttataaagtaagagcagtttagtaaaagcgttatatccaatgattatttcatttcatttcttaat 53716196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 38457460 - 38457653
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataatt 148  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||| | |||||||||||||||          ||| ||||||||  ||| ||||    
T  38457460 tgtttcaaaatgaatatcattttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctctcacacaatt 38457559  T
Q  149 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||| ||||| ||| ||||||||| ||||||||| |||||||| ||||||||||||| |  |||||||||||||||||||||||||||    
T  38457560 ttcaatgcaattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatgtgtaatgattatttcattcaatttcttaat 38457653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 43580430 - 43580673
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-ctt 113  Q
    |||||||||||||| |||||||| ||| ||||| ||       ||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||    
T  43580430 tacttcctccgtttcaaaatgagcgtcgctttagccaaaaaaatttgtttcaaaataaatgtcactttacattttcaatacaactttaattttttttctt 43580529  T
Q  114 ccaactttaccct---------ccccatctttt---ctcacataattttcaatgcaactttaattttgtctttttc--ttataaagtaagggcagtttgg 199  Q
    |||||||||||||         | ||| |||||   |||||| |||||||||||||||||||| ||||||||||||   ||||||  ||||||||||| |    
T  43580530 ccaactttacccttaataaatactccaactttttttctcacacaattttcaatgcaactttaaatttgtctttttcatatataaaacaagggcagtttag 43580629  T
Q  200 taaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||| ||||||||  |||||||||||||||| ||| |||||||    
T  43580630 taaaaatgttatatgtaatgattatttcattctattccttaatc 43580673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 83295 - 83476
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacat--aat 147  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||          | | |||||||| ||   |||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaattttttc-ttccaactttaccctcattaaatactctaacttttctctcacgcaat 83393  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | || |||||||| ||||||    
T  83394 tttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttgtgtctaatgattaattcatt 83476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 35239390 - 35239555
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaacttta 163  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |             ||||||| |||||||| ||||||||||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaactttaattttttc-ttccaacttttc-------------tctcacacaattttcactgcaacttta 35239475  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    | ||||||||||||||||||||||||| |||||| |||||| ||||||  | ||||||||||| ||||||||| ||||||    
T  35239476 agtttgtctttttcttataaagtaaggacagtttagtaaaaatgttatgcctaatgattattttattcaattttttaatc 35239555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 31291111 - 31290933
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatgcaacttta 163  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||  |||  || ||||  ||||||| |||||||| ||||||||||    
T  31291111 aaaatgaatatcactttacatttctaatacaactttaatttttttctttcaactttatgctcttcaacttttctctcacacaattttcattgcaacttta 31291012  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    | ||| ||||||||| ||||| ||| |||||||| ||||||||||||| || ||| |||||||||||  ||| |||||||    
T  31291011 agttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttcatttcattccttaatc 31290933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 54933359 - 54933194
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         | ||| ||||    ||||||| |    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 54933260  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  | ||| |||||| ||||||    
T  54933259 attttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 54933194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 44854314 - 44854499
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacat---aa 146  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||| |||||| |||||| |||||||||          ||| |||||||| ||    ||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaattttaactttttc-ttccaattttaccctcaataaatactccaacttttctctcagtacaa 44854412  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatt 235  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||  | || ||||||||||||||||||||    
T  44854413 ttttcaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaagtgt--tgtctaatgattatttcattcaatt 44854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 2662557 - 2662464
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||| || |||||||||||||||    
T  2662557 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatttcatt 2662464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 42740190 - 42740403
Alignment:
Q  18 ttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaa 117  Q
    ||||||| ||||||||| |||||| ||||| ||       ||| ||| ||||| |||||||||||| ||||  ||||  ||||||||||||| |||||||    
T  42740190 ttcctccattttaaaataagtgtctctttagccaaaaatatttattttaaaataaatgtcactttatatttttaatatcactttaatttttttcttccaa 42740289  T
Q  118 ctttaccctcccca--tcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcc 215  Q
     |||||| ||| ||  | |||||||||| ||||||||||||||||||||  || |  |||| ||||||| ||||||||| || ||||||||||||  ||     
T  42740290 ttttaccttcctcaacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtct 42740388  T
Q  216 aatgattatttcatt 230  Q
    |||||||||||||||    
T  42740389 aatgattatttcatt 42740403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 43599976 - 43599855
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatg 155  Q
    ||||||||||||||||||||  |||||||||   |||||||||||||||||| |||  |||||||||||| ||| ||||  ||||||| |||||| ||||    
T  43599976 tttgtttcaaaatgaatgtcgttttacatttttcatacaactttaatttttttcttttaactttaccctctccaacttttctctcacacaatttttaatg 43599877  T
Q  156 caactttaattttgtctttttc 177  Q
    ||||||||| ||||||||||||    
T  43599876 caactttaagtttgtctttttc 43599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 2988763 - 2988696
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaatacaa-tttaatttttttcttccaactttaccctc 2988696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 38165712 - 38165620
Alignment:
Q  151 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |  |||||||||||||||  ||| |||||||    
T  38165712 caatgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaagtgttatgtttaatgattatttcattacattccttaatc 38165620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 43169289 - 43169398
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||||||||||||||||||||| |||||  |        |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43169289 tactccctccgttttaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttc 43169388  T
Q  115 caactttacc 124  Q
     |||||||||    
T  43169389 taactttacc 43169398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 44645340 - 44645481
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc----acataatt 148  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||         | ||| ||||||||    ||||||||    
T  44645340 tttcaaaatgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcttacataatt 44645439  T
Q  149 ttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  44645440 ttcaatgcaactttaagtttatctttttcatataaagtaagg 44645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 25722659 - 25722450
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||||||| ||||| ||        || ||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  25722659 tactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaattatttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttc 25722560  T
Q  115 caactttaccct---------ccccatcttt----tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggta 201  Q
      ||||||||||         | ||| ||||    ||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||  | ||| |||    
T  25722559 atactttaccctaaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattcttgtaaagtaaggttattttagta 25722460  T
Q  202 aaagtgttat 211  Q
    ||| ||||||    
T  25722459 aaattgttat 25722450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 41287082 - 41287255
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttc--cttccaactttaccctcccca-----tc------ttttctcacataattttca 152  Q
    |||||| |||||||||||||||||||||||||||||||||||||   ||||||||||| |||||   |     ||      |||||||||| ||||||||    
T  41287082 aaaatggatgtcactttacatttccaatacaactttaatttttttttcttccaacttttccctcaataaatactcaaaccattttctcacacaattttca 41287181  T
Q  153 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattattt 226  Q
    |||||||||||| ||||  |||||| |||||| |||| ||||||| ||||||||||||| || |||||||||||    
T  41287182 atgcaactttaagtttgagtttttcatataaaataagtgcagtttagtaaaagtgttatgtctaatgattattt 41287255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 230
Target Start/End: Complemental strand, 9167810 - 9167661
Alignment:
Q  80 tttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttctt 179  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||| ||  || |||||||  ||  ||||||||||||| ||||| ||| | ||||| |     
T  9167810 tttatattttcaatacaactttaatttttttcttcctactttaccatcttcaacttttctttcacgattttcaatgcaattttaagttt-ttttttttta 9167712  T
Q  180 ataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||||||| |||||| |||||| |  |||||||||||||||    
T  9167711 ataaagtaagggcagtttagtaaaaatgttatgtgaaatgattatttcatt 9167661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 45095559 - 45095723
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactttaat 165  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||| |||||||| ||            || ||||||     
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaatttttt--ttccaactttaccctctccaacttttctctca------------cacctttaag 45095644  T
Q  166 tttgtctttttcttataaagtaa-gggcagtttggtaaaa-gtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||| |||||||||||||||| ||||| ||| |||||| ||||||| |  |||||||||||||||| ||| ||||||    
T  45095645 tttgtccttttcttataaagtaaggggcattttagtaaaatgtgttatgtttaatgattatttcattccattccttaat 45095723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 5244673 - 5244777
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 236  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||| |||| |  | |||  |||||||||||| || |||||||||||||||||||||    
T  5244673 tctcacattattttcaatgcaactttaagtttgtttttttcttataa-gtaaagagactttaataaaagtgttatgtctaatgattatttcattcaattt 5244771  T
Q  237 cttaat 242  Q
    ||||||    
T  5244772 cttaat 5244777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 32304060 - 32303991
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  32304060 tttgttttgaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 32303991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 13486003 - 13485909
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||| |||| |||| |||||||||||||||||| |        ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13486003 tactccctcagtttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttt 13485909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 22730924 - 22730989
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  22730924 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 22730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 43688040 - 43687872
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt---ttttccttccaactttaccct---------ccccatcttt----tctcac 142  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||         | ||| ||||    ||||||    
T  43688040 ttgttccaaaataaatgtcactttacatttccaatacaactttaattttttttttcttccaactttaccctcaataaatactccaacttttctctctcac 43687941  T
Q  143 ataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    | ||||||||||| |||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  43687940 acaattttcaatgaaactttaaatttgtcttgttcttataaagtaaggttattttagtaaaattgttat 43687872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 43736922 - 43736842
Alignment:
Q  149 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||||| ||| ||||||||||||||| |||| | ||||| |||||||||||||||| |||||||||||||||    
T  43736922 ttcaatgcaactttaagttt-tctttttcttataaaataagagtagtttagtaaaagtgttatatctaatgattatttcatt 43736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 51381720 - 51381867
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccctc----------cccatcttt-----tctcac 142  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||||          || || |||     ||||||    
T  51381720 ttgtttcaaaataaatgtcactttacatttacaatacaactttaattttttttcttctaactttaccctcgataaatactccaatttttctctctctcac 51381819  T
Q  143 ataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    | |||||||||||||||||||| ||||||||||| |||||||||||||    
T  51381820 acaattttcaatgcaactttaagtttgtctttttattataaagtaagg 51381867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 54261414 - 54261579
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc----acata 145  Q
    ||||||||||||||| ||| |||||||||| |||| ||||||||||||||| |||||||||||||||||          | | ||||||||    ||| |    
T  54261414 ttgtttcaaaatgaacgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctctcacaca 54261513  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||    
T  54261514 attttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttat 54261579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 4476498 - 4476334
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatctttt--ctcacataattttcaatgcaacttta 163  Q
    ||||| |||||||||||||||||  ||||  | ||||||||||| ||| ||| |||||| ||| || |||||  |||||| |||||||||||||||||||    
T  4476498 aaaataaatgtcactttacatttttaatatcattttaatttttttctttcaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 4476399  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |  || | | ||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  4476398 agcttat-tattttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 4476334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 27027732 - 27027899
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataat 147  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||||||| |||| ||||||| |||         | ||| ||||  ||||||| |||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatactccaacttttctctcacacaat 27027831  T
Q  148 tttcaatgcaactttaattttgtc----tttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||||||| ||||||    ||||| ||||||||||||| || |||  ||||||||||||    
T  27027832 tttcaatgcaactttaaatttgtcttttttttttttataaagtaaggacactttattaaaagtgttat 27027899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 27039415 - 27039519
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatt 235  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||||||||||||| || ||| |||||||||||||||  ||||||  |||||||| |||    
T  27039415 tctcacacaattttcaatgcaactttaaatttgtctttttttttataaagtaaggacactttagtaaaagtgttatatttaatgat--tttcattccatt 27039512  T
Q  236 tcttaat 242  Q
     ||||||    
T  27039513 acttaat 27039519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 20512651 - 20512453
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaacttt-aattttttccttccaactttaccct---------ccccatcttt----tctcacat 144  Q
    ||||||||||||||||||| |||||||||| |||| ||||||| |||||||| |||||||||||||| |         | ||| ||||    |||||||     
T  20512651 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaaatttttttcttccaactttaccttcaataaatactccaacttttctctctcacac 20512552  T
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| || |||  |   ||| ||||| ||||||||||||||||    
T  20512551 aattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaatttcttaatc 20512453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 35099518 - 35099453
Alignment:
Q  61 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 126  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  35099518 gtttcataataaatgtcattttacatttccaatacaactttaatttttttctcccaactttaccct 35099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 36310404 - 36310339
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||||| || |||||||||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaactttattttttttctcccaactttacc 36310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 53560754 - 53560807
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  53560754 tctcacataattttcaatgcaactttaagattgtctttttcttataaagtaagg 53560807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 4391902 - 4392088
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataa 146  Q
    ||||||| ||||||||| |||||||||||||  | ||||| ||||||||||| || |||||||||||||         | ||| ||||  |||| || ||    
T  4391902 tttgttttaaaatgaatatcactttacatttttagtacaattttaatttttttctcccaactttaccctcaataaatactccaacttttctctcgcacaa 4392001  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||||||| ||||||||||||||         ||||||||| ||||||||||||| || ||| |||||||||||  ||||||||||    
T  4392002 ttttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtctaataattatttcatttcatttcttaat 4392088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 22414757 - 22414947
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttttctcacataattttc 151  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||| |||||||||||||| |         | | | ||| ||| ||| |||||||    
T  22414757 tttcaaaatgaatgtcactttacatttttaatataactttaattttttttcttccaactttaccttcaataaatactcaaccttctcttacacaattttc 22414856  T
Q  152 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||| ||| || |||||||||||| ||  || |||||  ||||||| |||| || ||| |||||||||||  |||||||||||    
T  22414857 aatgcaactttaagtttctc-ttttcttataaactataggtagtttaataaaagtattatgtctaataattatttcatttcatttcttaatc 22414947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 43600341 - 43600152
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------cccatcttt--tctcacataattttc 151  Q
    ||||||||| ||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||        | |  ||||  ||||||| ||||| |    
T  43600341 tttcaaaataaatgttactttacattttcaatacaattttaatttttt-cttccaactttaccctcaataaatactctacttttctctcacacaatttcc 43600243  T
Q  152 aatgcaactttaattttgtc-tttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 240  Q
    |||  |||||||| |||||| ||||| ||||||||| ||||| ||||| |||||| ||||||||| ||| ||||||| |||  ||||||||    
T  43600242 aatataactttaaatttgtcattttttttataaagtaaagggaagtttagtaaaaatgttatatctaataattattttatttcatttctta 43600152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 3000751 - 3000883
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttt--tctcacataa 146  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||| |||||| || |||||| ||||||         | ||| ||||  ||||||| ||    
T  3000751 ttgttttaaaatgaatgttactttacattttcaatacaactttaattttttttctcccaactctaccctcaataaatactccaacttttctctcacacaa 3000850  T
Q  147 ttttcaatgcaactttaattttgtctttttctt 179  Q
    |||||||||||||||||| ||||||||||||||    
T  3000851 ttttcaatgcaactttaaatttgtctttttctt 3000883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 36541493 - 36541558
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||  ||||||||| ||||||||||||| ||| || |||||||||||||||||    
T  36541493 tttcaaaatgaatgtcgttttacattttcaatacaactttactttatttcttccaactttaccctc 36541558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 42857212 - 42857148
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    ||||| |||| |||||||||||||||||||| ||||||| |||||||||| |||| |||||||||    
T  42857212 tgttttaaaaggaatgtcactttacatttcccatacaacattaatttttttcttctaactttacc 42857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 52222892 - 52222831
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||  ||  |||||||||||||||||||||||||| |||||||||||||||||    
T  52222892 tcaaaatgaatgtcgttt--catttccaatacaactttaatttttttcttccaactttaccctc 52222831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 49470788 - 49470851
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 122  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||| | ||||| ||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaatttttttcatccaaattta 49470851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 15514872 - 15514830
Alignment:
Q  67 aaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  15514872 aaataaatgtcactttacatttccaatacaactttaatttttt 15514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 22731040 - 22731125
Alignment:
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| ||||||||||||||||||| | ||| |||||| |||||| |||||| |  |||||||||||||||  |||||||||||    
T  22731040 aactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatc 22731125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 38165783 - 38165733
Alignment:
Q  72 aatgtcactttacatttccaatacaactttaatt-ttttccttccaacttt 121  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  38165783 aatgtcactttacatttccaatacaactttaattttttttcttccaacttt 38165733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 52202445 - 52202383
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    |||||| ||||||||||||  ||| ||||| |||||||||||||||||||| |||||||||||    
T  52202445 ttgttttaaaatgaatgtcgttttgcattttcaatacaactttaatttttttcttccaacttt 52202383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 2988665 - 2988620
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  2988665 aattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 2988620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 43169424 - 43169477
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||    
T  43169424 tctcacacaattttcaatacaactttaagtttgtcttattcttataaagtaagg 43169477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 53560617 - 53560726
Alignment:
Q  12 ttctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcc 111  Q
    ||||||||||||||||| ||||||| |||  |||||  |       ||||||||||||| ||||||  ||||||||| |||| ||||||||||||||| |    
T  53560617 ttctacttcctccgtttcaaaatgaatgttgctttagtcaaaaaaatttgtttcaaaataaatgtcgttttacatttacaatgcaactttaatttttt-c 53560715  T
Q  112 ttccaacttta 122  Q
    |||||||||||    
T  53560716 ttccaacttta 53560726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 50420258 - 50420321
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 123  Q
    |||||| ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaactttaatttttt-cttccaactttac 50420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 5244584 - 5244652
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||| |||||||||||||| ||||||||  |||| ||||||||||||||   |||||||||||||||    
T  5244584 tttgttttaaaatgaatgtcaccttacatttttaatataactttaatttttt-tatccaactttaccctc 5244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 42007117 - 42007072
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||    
T  42007117 aattttcaatgcaactttaagtttgtcttgttcttataaaataagg 42007072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 42791330 - 42791388
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||||| |||||||||||| |||  || ||||||||||||||||| |||||||||||    
T  42791330 tttcaaaatcaatgtcacttta-attatcagtacaactttaatttttttcttccaacttt 42791388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 43599571 - 43599520
Alignment:
Q  179 tataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||| |||||||||||| |||||||| |||| || |||||||||||||||    
T  43599571 tataaaataagggcagtttagtaaaagtattatgtctaatgattatttcatt 43599520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 16240672 - 16240706
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttctt 179  Q
    |||||||||||||||||||| ||||||||||||||    
T  16240672 aattttcaatgcaactttaagtttgtctttttctt 16240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 15514785 - 15514752
Alignment:
Q  142 cataattttcaatgcaactttaattttgtctttt 175  Q
    ||||||||||||||||||||||| ||||||||||    
T  15514785 cataattttcaatgcaactttaagtttgtctttt 15514752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 32303960 - 32303915
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||    
T  32303960 aattttcaatacagctttaagtttgcctttttcttataaagtaagg 32303915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 36541581 - 36541634
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| ||||||| |||||||||||| |||||||| ||| ||||||| ||||    
T  36541581 tctcacacaattttcgatgcaactttaagtttgtcttgttcctataaagcaagg 36541634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 47895253 - 47895285
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcacttta 47  Q
    ||||||||||||||||||||||||||| |||||    
T  47895253 tacttcctccgttttaaaatgagtgtcgcttta 47895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 52732552 - 52732781
Alignment:
Q  17 cttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttcc 115  Q
    |||||||||||| ||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  52732552 cttcctccgtttcaaaatgagtgtcactttagttaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaattttttttcttcc 52732651  T
Q  116 aactttaccctccccatcttttctc--acataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 213  Q
    |||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  52732652 aactttaccctccccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttatat 52732751  T
Q  214 ccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||| |||| ||||||    
T  52732752 ccaatgattatttcattccattttttaatc 52732781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 43421273 - 43421087
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatg 155  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||  |||||||  ||| ||| |||||||    
T  43421273 tttgtttcaaaatgaaggtcactttacatttcccatacaactttaatttttttcttccaactttaccctctccaggttttctctcacacaatattcaatg 43421174  T
Q  156 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  43421173 caactttaattttgtctttttcttataaagtaagagcaatttagtaaaagtattatatccaatgattatttcattccatttcttaat 43421087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 34360033 - 34360195
Alignment:
Q  83 acatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgcaactttaattttgtctttttctta 180  Q
    |||||| ||||||||||||| |||||| ||||||||||||||||| ||| ||||||||  ||| |||||||||||||||||||| |||||||||||||||    
T  34360033 acattttcaatacaactttattttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttctta 34360132  T
Q  181 taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||  ||| |||||||    
T  34360133 taaagtaagggcagtttagtaaaagtgttatatctaatgattatttcatttcattccttaatc 34360195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 15501302 - 15501129
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgc 156  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||  || ||||||||  ||| |||||| |||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacattactctcttcaacttttctctcacacaatttttaatgc 15501203  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||    
T  15501202 aactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattatttcatt 15501129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 51930556 - 51930765
Alignment:
Q  20 cctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 119  Q
    ||||||||| ||||||||||||||||||          |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  51930556 cctccgtttcaaaatgagtgtcactttagttaaaaaaatttgtttcaaaatgaatgtcgctttacatttccaatacaattttaatttttttcttccaact 51930655  T
Q  120 ttaccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 219  Q
    || |             ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||     
T  51930656 tttc-------------tctcacacaattttcaatgcaactttaattttgtcattttcttataaagtaagggcagtttagtaaaagcgttatatccaatt 51930742  T
Q  220 attatttcattcaatttcttaat 242  Q
    |||||||||||| ||||| ||||    
T  51930743 attatttcattccatttcataat 51930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 21045108 - 21045323
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-ctt 113  Q
    |||||||||||||| ||||||||||||| || | ||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  21045108 tacttcctccgtttcaaaatgagtgtca-ttgagccaaaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttctt 21045206  T
Q  114 ccaactttaccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 213  Q
    |||||||| |             ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||    
T  21045207 ccaacttttc-------------tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttaataaaagccttatat 21045293  T
Q  214 ccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||| ||| |||||||    
T  21045294 ccaatgattatttcattccattccttaatc 21045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 50072238 - 50072438
Alignment:
Q  21 ctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 120  Q
    |||||||| |||||||||||||||||| ||        |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  50072238 ctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactt 50072337  T
Q  121 taccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatga 220  Q
                 |||||||||| |||||||||||||||||||||||||      |||||||||||||||||||||| ||||||  ||||||||||||||    
T  50072338 -------------ttttctcacacaattttcaatgcaactttaattttg------tcttataaagtaagggcagtttagtaaaaacgttatatccaatga 50072418  T
Q  221 ttatttcattcaatttctta 240  Q
    ||||||||||| ||||||||    
T  50072419 ttatttcattccatttctta 50072438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 54512034 - 54512212
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgcaacttta 163  Q
    ||||||||| |||||||||||||  |||| |||||||||||||  |||||||||||| |||| ||| ||||||||  ||| ||| |||||||||||||||    
T  54512034 aaaatgaatatcactttacatttttaatataactttaatttttatcttccaactttatcctctccaacttttctctcacacaatgttcaatgcaacttta 54512133  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||| |||||||||||  ||||||||||    
T  54512134 attttgtcattttcttataaagtaagagcagtttagtaaaaacgttatatccaattattatttcatttcatttcttaat 54512212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 44855237 - 44855433
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaa--ctttaccctcc---------ccatcttttctc--acata 145  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| ||||  |||||||  ||||||||||          ||| ||||||||  ||| |    
T  44855237 ttgtttcgaaataaatgtcactttacatttccaatacaactttaagttttctcttccaattctttaccctcaataaataatccaacttttctctcacaca 44855336  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||    
T  44855337 attttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatattcaatgattatttcattctatttcttaat 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 242
Target Start/End: Complemental strand, 31817375 - 31817162
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||||||||| ||| ||       |||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||    
T  31817375 tactccctccgtttcaaaatgagtgtcacattagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatgcaacttt--tttttttcttc 31817278  T
Q  115 caactttaccctccccatcttttctcacataattttcaatgcaactttaattttgtcttttt-cttataaagtaagggcagtttggtaaaagtgttatat 213  Q
    ||||||| |             ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||  |||||||    
T  31817277 caacttttc-------------tctcacacaattttcaatgcaactttaattttgtattttttcttataaagtaagggaagtttagtaaaaacgttatat 31817191  T
Q  214 ccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||||||| ||||||||||    
T  31817190 ccaatgattatttcattccatttcttaat 31817162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 32141119 - 32140948
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |             ||||||| ||||||||||||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacaattttcaatgcaa 32141033  T
Q  159 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
     ||||  ||||||||||  |||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  32141032 atttatgtttgtcttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgattatttcattcaatttcttaatc 32140948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 45520651 - 45520420
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||||||||||||||||| |||||||       ||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  45520651 tccgttttaaaatgagtgtcattttaaccaaaataatttattttaaaatgaatgtcactttacattttcaatacaactttaattttttc-ttccaacttt 45520553  T
Q  122 accct---------ccccatcttttctcacata--attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgtta 210  Q
    | |||         | | | |||||||| ||||  ||||| ||||||||||||| |||||||| ||||||||| |||||||||| || ||||||||||||    
T  45520552 atccttgataaatactcaaacttttctctcatacaatttttaatgcaactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgtta 45520453  T
Q  211 tatccaatgattatttcattcaatttcttaatc 243  Q
    | || ||||||||||| |||| |||||||||||    
T  45520452 tgtctaatgattattttattccatttcttaatc 45520420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 37445655 - 37445837
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttct--cacataat 147  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||          | |  ||||||  ||||||||    
T  37445655 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttcacataat 37445754  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  37445755 ttttaatgcaactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatt 37445837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 36805600 - 36805412
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc--catctttt--ctcacataattttcaat 154  Q
    |||||| |||||| |||| | ||||||||| |||||||||||||||||||| |||||||||||| |||| |  || |||||  |||||| ||||||||||    
T  36805600 ttgttttaaaatgtatgttattttacatttgcaatacaactttaatttttttcttccaactttaacctcactccaacttttttctcacacaattttcaat 36805501  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
     ||||||||| |||||||||||| |||||| ||||| |||||| ||||||||||||| || |||||||||||||||  ||| |||||||    
T  36805500 acaactttaagtttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatc 36805412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 19849079 - 19849273
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataat 147  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||          ||| ||||||||  ||| |||    
T  19849079 ttgttttaaaatgaatttcactttacaattccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcacacaat 19849178  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||||  ||| ||||||| |||  ||||||||||    
T  19849179 tttcaatgcaactttaagtttgtttttttcttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 19849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 39671238 - 39671068
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||| |             ||||||| ||||||||||||||    
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaattttttctttc-aacttttc-------------tctcacacaattttcaatgcaa 39671153  T
Q  159 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||| || |||||| ||||||||| |||||||||||    
T  39671152 ctttaagtttgtttttttcttataaagtaaaggtagtttagtaaatgtgttatgtctaatgataatttcattccatttcttaatc 39671068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 24259606 - 24259771
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         | ||| ||||    ||||||| |    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 24259705  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  | ||| |||||| ||||||    
T  24259706 attttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 24259771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 56423056 - 56422961
Alignment:
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||| |||||||| |||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  56423056 tttcaatgcaattttaatttcgtctttttcttataaagtaaagacagtttagtaaaagcgttatatccaatgattatttcattcgatttcttaatc 56422961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 30022062 - 30022257
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataa 146  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||         |  || ||||  ||||||| ||    
T  30022062 tttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaa 30022161  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||| | ||||||||||||||||| |  || || ||||| |||||||||||||||  ||||||||||| |||  ||| |||||||    
T  30022162 ttttcaatgcaactttgagtttgtctttttcttatacaagaa-ggtagtttagtaaaagtgttatatataatgattattttatttcattccttaatc 30022257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 22212336 - 22212518
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatc--ttttctcacataat 147  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||         | ||| |  |||||||||| |||    
T  22212336 ttgttttaaaatgaatgtcaccttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctcacacaat 22212435  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| ||||||||| ||||  |||||  ||||||  || |||||||| ||||||||||||| || |||||||||||||||    
T  22212436 tttcaatacaactttaagtttgagttttttatataaaacaaaggcagttttgtaaaagtgttatgtctaatgattatttcatt 22212518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 31941553 - 31941697
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatct----tttctcacata 145  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||         | ||| ||    | |||||||||    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaactattctctctcacata 31941652  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  31941653 attttcaatgcaactttaagtttgtcttgttcttataaagtaagg 31941697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 6462004 - 6462073
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcc 6462073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 34096100 - 34096193
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||  || |||||||||||||||    
T  34096100 tctcacacaattttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaagtgttaagtctaatgattatttcatt 34096193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 31987306 - 31987430
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataattttcaat 154  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||         | ||| ||||  |||| |||||||||||||    
T  31987306 aaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcgcataattttcaat 31987405  T
Q  155 gcaactttaattttgtctttttctt 179  Q
    |||||||||| ||||||||||||||    
T  31987406 gcaactttaaatttgtctttttctt 31987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 28116243 - 28116307
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 126  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28116243 tttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccct 28116307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 29840026 - 29840139
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttcctt 113  Q
    |||| ||||||||| ||||||| |||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||     
T  29840026 tactccctccgtttcaaaatgactgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttctc 29840125  T
Q  114 ccaactttaccctc 127  Q
    ||||||||||||||    
T  29840126 ccaactttaccctc 29840139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 35928486 - 35928650
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacataattt 149  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||         |  || | |||||  || |||||    
T  35928486 ttgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactgcaacgtttctttcacaattt 35928585  T
Q  150 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatc 214  Q
    ||||||||| ||||| ||| ||||||||||||||||| | |||| ||| ||||||||| ||||||    
T  35928586 tcaatgcaattttaagtttatctttttcttataaagtcatggcaatttagtaaaagtgatatatc 35928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 56556410 - 56556241
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||             || ||||||| ||||||||||| |    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactt-------------ttctctcacacaattttcaatgta 56556324  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |  |||| ||||| |||||||||||||| ||||  | ||| ||||||||||||| || ||||   ||||||||||||| |||||||    
T  56556323 atgttaagtttgtatttttcttataaagcaaggataatttagtaaaagtgttatgtctaatg---atttcattcaattccttaatc 56556241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 19282567 - 19282501
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttacc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttacc 19282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 17499874 - 17499732
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||         | | | ||||    ||||| | |    
T  17499874 ttgtttcaaaatgaatgtcgctttacatttccaatgcaattttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcataca 17499775  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaa 188  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  17499774 attttcaatgcaactttaagtttgtctttttcttataaagtaa 17499732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 42672481 - 42672566
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||| ||||||||| |||||||||||||||||||||| | | ||||| ||||||||||||| || |||||||||||||||    
T  42672481 aattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagtaaaagtgttatgtctaatgattatttcatt 42672566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 47321138 - 47321284
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttttctca----ca 143  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||         | | | |||||||||    ||    
T  47321138 tttgttttaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaacttttctcactcgca 47321237  T
Q  144 taattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
     ||||||||||||||||||||  ||||||||||||||||||||||||    
T  47321238 caattttcaatgcaactttaaggttgtctttttcttataaagtaagg 47321284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 51434452 - 51434346
Alignment:
Q  21 ctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 120  Q
    ||||||||||||||||||||| |||||||         |||||| |||||||||||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  51434452 ctccgttttaaaatgagtgtcgctttaacaaaaaaaaattgttttaaaatgaatgtcgctttacatttctaatgcaactttaattttttccttcaaactt 51434353  T
Q  121 taccctc 127  Q
    |||||||    
T  51434352 taccctc 51434346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 34124246 - 34124455
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||||||||| ||||||||||||||||  ||||  |       ||||||| |||||||||||| |||||||||| |||| ||||||||||||||| ||||    
T  34124246 tacttcctccattttaaaatgagtgtcgttttagtcaaaaaaatttgttttaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttc 34124345  T
Q  115 caactttaccctcc---------ccatcttttctc----acataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggta 201  Q
    |||||||||||||          | | ||||||||    ||| |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||    
T  34124346 caactttaccctcaataaatactcaaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagta 34124445  T
Q  202 aaagtgttat 211  Q
    ||| ||||||    
T  34124446 aaattgttat 34124455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 30492732 - 30492791
Alignment:
Q  68 aatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  30492732 aatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctc 30492791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 45889559 - 45889702
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc----acata 145  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||| ||||| ||||| |||||||||||          ||| ||||||||    ||| |    
T  45889559 ttgtttcaaaatgaatgtcgctt-acattttcaatacaactttaacttttttcttcctactttaccctcaataaatactccaacttttctctctcacaca 45889657  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  45889658 attttcaatgcaactttaagtttgtttttttcttataaagtaagg 45889702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 45903559 - 45903378
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacat--aatttt 150  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||| | |||         | |   |||||||| |||  ||||||    
T  45903559 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctaccaacttaaacctcaaaaagtactctgacttttctctcatccaatttt 45903460  T
Q  151 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||           | |||||||||| |||||||  |||||| ||||||||||||||||||||||||| |||||||||||    
T  45903459 caatgcaactttaatt-----------taataaagtaagagcagtttaataaaagcgttatatccaatgattatttcattctatttcttaatc 45903378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 11835105 - 11835294
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacataattttca 152  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||| ||| ||| |||||| |         | | | ||| ||||||| ||||||||    
T  11835105 tttcaaaatgaatgtcactttacatttttaatataactttaatttttttctttcaaatttaccttcaataaatactcaaccttctctcacacaattttca 11835204  T
Q  153 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||| ||| || |||||||||||| ||  || |||||  ||||||||||||  | ||| |||||||||||  |||||||||||    
T  11835205 atgcaactttaagtttatc-ttttcttataaactataggtagtttaataaaagtgttatgcctaataattatttcatttcatttcttaatc 11835294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 54233902 - 54233954
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  54233902 tctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaag 54233954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 32141280 - 32141163
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccctcccca--tcttttctcacataattttcaatg 155  Q
    ||||||||||||||| ||||||| | ||||  ||||||||||||||| |||| ||||||||||||||||| |||  ||||| |||||||       ||||    
T  32141280 ttgtttcaaaatgaacgtcacttcatattttgaatacaactttaattttttttcttccaactttaccctctccaactctttcctcacat-------aatg 32141188  T
Q  156 caactttaattttgtctttttctta 180  Q
    ||||||||| |||||||||||||||    
T  32141187 caactttaagtttgtctttttctta 32141163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 3093433 - 3093538
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 236  Q
    ||||||| ||||| | |||||||||||| ||| | |||||||||||||| |||| || |||  | |||||||||| || ||||||||||| |||||||||    
T  3093433 tctcacacaatttccgatgcaactttaaatttct-tttttcttataaaggaaggacaatttaatgaaagtgttatgtctaatgattattttattcaattt 3093531  T
Q  237 cttaatc 243  Q
    |||||||    
T  3093532 cttaatc 3093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 6510112 - 6510181
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||  |||||||||||||    
T  6510112 tttgtttcaaaataaatgtcactttatattttcaatacaactttaacttttttctctcaactttaccctc 6510181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 17317999 - 17317950
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17317999 tgtttcaaactgaatgtcacattacatttccaatacaactttaatttttt 17317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 38692408 - 38692516
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||||||| || |||||||             || |||| || |||||||||||||    
T  38692408 tttgttttaaaatgaatgtcactttacattttcaattaaactttaatttttttctcccaactt-------------ttctctcgcacaattttcaatgca 38692494  T
Q  158 actttaattttgtctttttctt 179  Q
    ||||||||||||||||||||||    
T  38692495 actttaattttgtctttttctt 38692516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 1868255 - 1868208
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattt 106  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  1868255 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaattt 1868208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 6232192 - 6232141
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  6232192 tttgtttcaaaataaatgtcaatttacattttcaatacaactttaatttttt 6232141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 4408243 - 4408169
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||  | ||| |||||| ||||||    
T  4408243 tctcacacaattttcaatgcaattttaagtttgtctttttcttatatagtaaggttattttagtaaaattgttat 4408169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 38761898 - 38761788
Alignment:
Q  133 cttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattca 232  Q
    |||||||| || ||||||||| | |||||||| | ||||||| ||| ||||||||||||   ||| ||||||||||||| || | | ||||||| ||||     
T  38761898 cttttctctcacaattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagtaaaagtgttatgtctattaattatttaattct 38761799  T
Q  233 atttcttaatc 243  Q
    |||||||||||    
T  38761798 atttcttaatc 38761788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 29289959 - 29289852
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtct---ttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 233  Q
    ||||||| |||||||||||||| ||||| |||||||   |||| ||||||||||| |||  |||  ||||| | |||| || |||||||||||||||| |    
T  29289959 tctcacacaattttcaatgcaattttaagtttgtctttttttttttataaagtaaaggcgatttattaaaaatattatgtctaatgattatttcattcca 29289860  T
Q  234 tttcttaa 241  Q
    ||||||||    
T  29289859 tttcttaa 29289852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 44835341 - 44835398
Alignment:
Q  71 gaatgtcactttacatttccaatacaactttaattttttccttcc-aactttaccctc 127  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  44835341 gaatatcactttacatttcgaatacaactttaatttttttcttccaaactttaccctc 44835398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 51737367 - 51737285
Alignment:
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||| ||||||||||||  |||||||||||| | ||| ||||||||||||| || ||| |||||||||||| ||| ||||||    
T  51737367 actttaagtttgtctttttc--ataaagtaagggtaatttagtaaaagtgttatgtctaattattatttcattctattccttaat 51737285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 54233844 - 54233900
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 119  Q
    |||||||||||||| | |||||||||| |||||||||||||||||||| |||||||||    
T  54233844 tttcaaaatgaatgccgctttacattttcaatacaactttaatttttt-cttccaact 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 54091953 - 54092021
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| ||||||||||||| |||| ||||  ||||||||||||||||||| ||  |||||||||||||    
T  54091953 ttgttttaaaatgaatgtcaatttagatttttaatacaactttaatttttttctctcaactttaccctc 54092021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 6231652 - 6231702
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||||||||||||||||||||| ||||  | |||||||||||||||||    
T  6231652 ttgtttcaaaatgaatgtcactttatatttatagtacaactttaatttttt 6231702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 29290040 - 29289982
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||| |||| |||||||||    
T  29290040 aaaattaatgtcactttatattttcaatacaacttcaatttttttcttcaaactttacc 29289982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 4408335 - 4408286
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttt 108  Q
    ||||||||||||||||||| |||||||||  |||| ||||||||||||||    
T  4408335 ttgtttcaaaatgaatgtcgctttacattctcaatgcaactttaattttt 4408286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 34096010 - 34096079
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccctc 127  Q
    ||||||||||| |||||||| |||||||||| ||||||| ||||| ||||||  || |||||||||||||    
T  34096010 ttgtttcaaaacgaatgtcaatttacatttctaatacaattttaattttttttttttcaactttaccctc 34096079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 51434315 - 51434270
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||| || || ||||||||||||||||||||||    
T  51434315 aattttcaatgcaacttaaagttagtctttttcttataaagtaagg 51434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 55126494 - 55126559
Alignment:
Q  61 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 126  Q
    |||| ||||||||||||| |||| |||| |||||||||||||||||||  |||| |||| ||||||    
T  55126494 gttttaaaatgaatgtcattttaaattttcaatacaactttaatttttctcttctaactctaccct 55126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 55548380 - 55548313
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||| | ||||||||||||||| |||| |||||||||||| ||  |||||||||| |||||    
T  55548380 ttgtttcaaaataagtgtcactttacattttcaatgcaactttaatttctt-tttccaactttgccctc 55548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 6462102 - 6462153
Alignment:
Q  139 tcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||| ||| |||||||||||||||| ||||| || ||||||||||||||||    
T  6462102 tcacacaatattcaatgcaactttaagtttgttttgttcttataaagtaagg 6462153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 28116334 - 28116384
Alignment:
Q  140 cacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||| |||||||| || |||||||| |||||||| ||||||||||||||||    
T  28116334 cacacaattttcagtgtaactttaagtttgtcttattcttataaagtaagg 28116384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 30492828 - 30492909
Alignment:
Q  152 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||| ||||||||||||||         ||||||||  ||||||||||||| || |||||||||||||||| ||| ||||||    
T  30492828 aatgcaactttaagtttgtctttttctt---------gggcagttcagtaaaagtgttatgtctaatgattatttcattccattccttaat 30492909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 34534157 - 34534111
Alignment:
Q  139 tcacataattttcaatgcaacttt-aattttgtctttttcttataaa 184  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||    
T  34534157 tcacacaattttcaatgcaacttttaagtttgtctttttcttataaa 34534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 55126591 - 55126636
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||  ||||||||||| |||||||| ||||||||||||||||    
T  55126591 aattttccttgcaactttaagtttgtcttattcttataaagtaagg 55126636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 51434169 - 51434205
Alignment:
Q  14 ctacttcctccgttttaaaatgagtgtcactttaacc 50  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  51434169 ctacttcctccgttttaaaatgaatgtcgctttaacc 51434205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 29795381 - 29795170
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||||||||||| |||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29795381 tccgttttaaaatgaatgtcactttagccaaaaatatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacttt 29795282  T
Q  122 accctccccatcttttc--tcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 219  Q
    |||||| ||| ||||||  ||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||| || ||||    
T  29795281 accctctccaacttttctttcacacaattttcaatgcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtctaatg 29795182  T
Q  220 attatttcattc 231  Q
    ||||||||||||    
T  29795181 attatttcattc 29795170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 40410473 - 40410636
Alignment:
Q  82 tacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgcaactttaattttgtctttttctt 179  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||| ||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  40410473 tacatttccaatacaactttaatttttttctcccaactttaccctctccaacttttctctgacacaattttcaatgcaactttaattttgtctttttctt 40410572  T
Q  180 ataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||||  |||||| |||||||||||||||||| |||||| |||||||||||    
T  40410573 ataaagtaagggcagtttaataaaagcgttatatccaatgattatgtcattccatttcttaatc 40410636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 40987418 - 40987254
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactttaat 165  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||||||||||||||||||     
T  40987418 aaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacaattttcaatgcaactttaaa 40987319  T
Q  166 tttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||| ||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||||    
T  40987318 tttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatttcatt 40987254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 4840881 - 4840687
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataat 147  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          | | ||||||||  ||| | |    
T  4840881 ttgttccaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctcccacacagt 4840782  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||    
T  4840781 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattccatttcttaat 4840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 227
Target Start/End: Original strand, 1381748 - 1381916
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    |||||| ||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||| || ||| |||||||| || ||||||||||||||    
T  1381748 ttgttttaaaatgaatgttactttacatttccaatataactttgatttttttcttccaactttaccttctccaacttttctctcacaattttcaatgcaa 1381847  T
Q  159 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttc 227  Q
     ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||    
T  1381848 ttttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatgtctaatgattatttc 1381916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 7743401 - 7743586
Alignment:
Q  61 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataattt 149  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||          ||| ||||||||  ||| |||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaatctttttcttccaactttaccctcaataaatagtccaacttttctctcacacaattt 7743500  T
Q  150 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatt 235  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||  |||||||||||||| ||||    
T  7743501 tcaatgcaactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgttatatctgatgattatttcatttaatt 7743586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 1298931 - 1298739
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataatttt 150  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||| ||||          ||| ||||||||  ||||||||||    
T  1298931 tttcaaaatgaatgtcactttacatttctaatacaactttaatttttctcatcgaactttatcctcaataaattctccaacttttctctcacataatttt 1298832  T
Q  151 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||| ||||||||||||||||  |||||||||||    
T  1298831 caatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatattcaatgattatttcattttatttcttaatc 1298739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 60 - 230
Target Start/End: Complemental strand, 4766341 - 4766184
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaac 159  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| |             ||||||| |||||||||||||||    
T  4766341 tgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaacttttc-------------tctcacacaattttcaatgcaac 4766255  T
Q  160 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |  ||||||||||||||||||||||||    
T  4766254 tttaattttgtctttttcttataaagtaaaggcagtttagtaataacgttatatccaatgattatttcatt 4766184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 4536521 - 4536742
Alignment:
Q  8 tgcattctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttt 107  Q
    |||||| |||| ||||||||| |||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4536521 tgcattatactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttt 4536620  T
Q  108 ttccttccaactttaccctcccca-----tct---tttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttgg 199  Q
    || || ||||||||||||||  ||     |||   ||||||||| |||||||||||||||||||| ||||||||||||||         ||||||||| |    
T  4536621 tttctcccaactttaccctcaacaaatactctaactttctcacacaattttcaatgcaactttaaatttgtctttttctt---------gggcagtttag 4536711  T
Q  200 taaaagtgttatatccaatgattatttcatt 230  Q
    |||||||| ||| || |||||||||||||||    
T  4536712 taaaagtgatatgtctaatgattatttcatt 4536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 14378371 - 14378219
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactttaat 165  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |             |||| |||||||||||||||||||||||     
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaacttttc-------------tctcgcataattttcaatgcaactttaaa 14378285  T
Q  166 tttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 231  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  14378284 tttatctttttcttataaagtaagggcagtttagtaaaagtgttatattaaatgattatttcattc 14378219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 36360522 - 36360347
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccat---------cttttctcacataattttcaat 154  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| ||| |||||||||||||   ||         ||||||||||| ||||||||||    
T  36360522 tcaaaatgaatatcactttgcattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctcacacaattttcaat 36360423  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
     ||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||    
T  36360422 acaactttaagtttatctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattatttcatt 36360347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 34225771 - 34225943
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |             ||||||| |||||||||||||    
T  34225771 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 34225857  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||| | |||| || |||||||||||||||  ||| |||||||    
T  34225858 actttaagtttgtctttttcttataaagtaagggcaatttagtaaaattattatgtctaatgattatttcatttcattccttaatc 34225943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 43460860 - 43460961
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 236  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||   ||||||||||||||||||||| ||||    
T  43460860 tctcacataattttcaatacaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtg---tatccaatgattatttcattccattt 43460956  T
Q  237 cttaa 241  Q
    |||||    
T  43460957 cttaa 43460961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 24775186 - 24775373
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catcttttctc--acataa 146  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||| || |||| |||||||||           || ||||||||  ||| ||    
T  24775186 tttgttttaaaatgattgtcactttacattttcaatacaattttaatttttttctcccaagtttaccctcaataaatacttcaacttttctctcacacaa 24775285  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaat 234  Q
    ||||||||  |||||||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||    
T  24775286 ttttcaatataactttaagtttgtttttttcttataaagtaagagcattttagtaaaagtgttatatctaatgattatttcattcaat 24775373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 33093322 - 33093434
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||||||||||||||||||||| |||| ||        ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  33093322 tactccctccgttttaaaatgagtgtctctttgactaaaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttc 33093421  T
Q  115 caactttaccctc 127  Q
    |||||||||||||    
T  33093422 caactttaccctc 33093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 43388855 - 43388648
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| ||||||||||||| |||| ||       |||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||    
T  43388855 tactccctccgtttcaaaatgagtgtcattttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttc 43388756  T
Q  115 caactttaccctc--------ccca---tcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaa 203  Q
    |||||||||||||        | ||   | || |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||    
T  43388755 caactttaccctcaataaatactcaaacttttctctcacataattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaa 43388656  T
Q  204 agtgttat 211  Q
    | ||||||    
T  43388655 attgttat 43388648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 204
Target Start/End: Original strand, 16316710 - 16316863
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatctttt--ctcacataatttt 150  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||  ||          ||| |||||  |||||| ||||||    
T  16316710 tttcaaattgaatgtcactttatatttccaatacaactttaatttttttcttccaaatttactttcaataaatattccaacttttatctcacacaatttt 16316809  T
Q  151 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaa 204  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  16316810 caatgcaactttaattttgtctttttcttatacagtaagggcaatttagtaaaa 16316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 42969864 - 42970069
Alignment:
Q  26 ttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccc 125  Q
    ||||||||| |||||||||||| ||       ||| ||| ||||| |||||||||||||||||  ||||| ||||||||||||| |||| || ||||||     
T  42969864 ttttaaaataagtgtcactttagccaaaaatatttattttaaaataaatgtcactttacatttttaataccactttaatttttttcttctaattttacct 42969963  T
Q  126 tcccca--tcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatta 223  Q
    ||||||  | |||||||||| ||||||||||||||||||||  || || |||| ||||||| |||| |||| || ||||||||||||  || ||| ||||    
T  42969964 tccccaacttttttctcacacaattttcaatgcaactttaaggttatcatttttttataaaataagagcag-ttagtaaaagtgttacgtctaataatta 42970062  T
Q  224 tttcatt 230  Q
    |||||||    
T  42970063 tttcatt 42970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 37106886 - 37107056
Alignment:
Q  85 atttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acataattttcaatgcaactttaattttgtctt 173  Q
    |||| |||||||||||||||||||| ||||||||||||||||         | ||| ||||||||  ||| |||||||||||||||||||| ||| ||||    
T  37106886 attttcaatacaactttaatttttttcttccaactttacccttaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttttctt 37106985  T
Q  174 ttt--cttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||  ||||||||||||||||| ||| ||||||||||| | || ||| |||||||||||| ||||||||||    
T  37106986 ttttgcttataaagtaagggcaatttagtaaaagtgttgtgtcaaataattatttcattccatttcttaat 37107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 10581055 - 10580944
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||||||||||||||||||||||||||  |||| ||        |||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||    
T  10581055 tacttcctccgttttaaaatgagtgtcg-tttagccaaaaaaaattgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttc 10580957  T
Q  115 caactttaccctc 127  Q
    |||||||||||||    
T  10580956 caactttaccctc 10580944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 14698010 - 14698130
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||| |           | ||||||| |||||||||| |||    
T  14698010 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaacttttc-----------tctctcacacaattttcaatacaa 14698098  T
Q  159 ctttaattttgtctttttcttataaagtaagg 190  Q
    |||||| ||||| |||||||||||||||||||    
T  14698099 ctttaagtttgtatttttcttataaagtaagg 14698130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 43344375 - 43344195
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc-----------ctccccatcttttctcacataat 147  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||  ||||||||||||||           |||    | || |||||||||||    
T  43344375 ttgtttcaaaatgaatgtcaccttatattttcaatacaactttaattttt--cttccaactttacctttaataaatactctaatttttctctcacataat 43344278  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| |||||||||  || ||||||||||||||||||||||  ||||  ||||| |||||| || |||||||||||||||    
T  43344277 tttcaatacaactttaaacttatctttttcttataaagtaagggtggtttaataaaattgttatgtctaatgattatttcatt 43344195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 1360175 - 1360243
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||    
T  1360175 ttgtttcaaaatgaatgtcactttgcatttccaatacaactttaatttttttctcccaattttaccctc 1360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 2459771 - 2459839
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  2459771 ttgttttaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaactttaccctc 2459839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 18374918 - 18374850
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  18374918 ttgtttgaaaatgaatgtcactttacatttccaatataattttaatttttttcttccaactttaccctc 18374850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 41984416 - 41984561
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttct----cacata 145  Q
    |||||||||||| ||| || |||||||||| |||||||||||||||||||| |||||||||||||| |         | ||| |||||||    |||| |    
T  41984416 ttgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacctttaataaatactccaacttttctctcacacaca 41984515  T
Q  146 attttcaatgcaactttaa-ttttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  41984516 attttcaatgcaactttaagttttgtcttattcttataaagtaagg 41984561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 776039 - 775972
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||| ||||||||||||    
T  776039 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttt-cttctaactttaccctc 775972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 25332525 - 25332636
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    ||||||||| |||| ||||||| |||| |||||||        |||||||||||||||| ||| | ||||||||||||| ||||||||||||||| ||||    
T  25332525 tacttcctctgtttcaaaatgattgtcgctttaacaaaaaaaatttgtttcaaaatgaacgtcgccttacatttccaatgcaactttaatttttt-cttc 25332623  T
Q  115 caactttaccctc 127  Q
    |||||||| ||||    
T  25332624 caactttatcctc 25332636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 39866820 - 39866762
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  39866820 aaaatgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttacc 39866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 11171839 - 11171935
Alignment:
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||| ||||| |||||||| ||||||||||||  ||||||| |||  | ||| ||||||||||||| || | ||||||||| |||||||||||||||    
T  11171839 atttccaatgtaactttaagtttgtctttttcgcataaagttaggataatttagtaaaagtgttatgtctattgattattttattcaatttcttaat 11171935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 14511459 - 14511526
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||| ||||||||||  |||||||| ||||||||||||| | ||||||| ||||    
T  14511459 tgtttcaaaatgaatgtctctttacattttgaatacaacattaattttttcctccaaactttatcctc 14511526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 45148106 - 45148055
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc 110  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaattttttc 45148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 775941 - 775875
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||  | ||| |||||| ||||||    
T  775941 aattttcaatgcaactttaagtttgtctttttcttataaattaaggttattttagtaaaattgttat 775875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 4566186 - 4566112
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||  | ||| |||||| ||||||    
T  4566186 tctcacacaattttcaatgcaactttaaatttatctttttcttataaaataaggttattttagtaaaattgttat 4566112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 6591963 - 6592013
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||||    
T  6591963 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttt 6592013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 19505936 - 19506018
Alignment:
Q  20 cctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 103  Q
    ||||| ||||||||||||||||||||||||        ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  19505936 cctccattttaaaatgagtgtcactttaactaaaaaaatttgtttcaaaataaatgtcacttta-attcccaatacaactttaa 19506018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 44228609 - 44228659
Alignment:
Q  193 agtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||| |||||||||||||||| |||||||||||||||| |||| ||||||    
T  44228609 agtttagtaaaagtgttatatctaatgattatttcattccattttttaatc 44228659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 2459862 - 2459915
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||||||||||||||||| |||||| | |||||||||| |||||    
T  2459862 tctcacacaattttcaatgcaactttaagtttgtcctattcttataaaataagg 2459915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 25332667 - 25332712
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||    
T  25332667 aattttcaatacaactctaagtttgtctttttcttataaagtaagg 25332712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 45372686 - 45372645
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactt 100  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  45372686 ttgttttaaaatgaatgtcactttacattttcaatacaactt 45372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 43460792 - 43460839
Alignment:
Q  80 tttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  43460792 tttacatttccaatacaactttaagttttctcttccaacgttaccctc 43460839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 1360272 - 1360306
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttctt 179  Q
    |||||||||||||||||||| ||||||||||||||    
T  1360272 aattttcaatgcaactttaagtttgtctttttctt 1360306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 4566263 - 4566214
Alignment:
Q  73 atgtcactttacatttccaatacaactttaattttttccttccaacttta 122  Q
    ||||||||||||||||  |||||||||||||||||||  || ||||||||    
T  4566263 atgtcactttacatttttaatacaactttaatttttttttttcaacttta 4566214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 10580913 - 10580869
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    |||||||||| |||||||||  ||||||| |||||||||||||||    
T  10580913 aattttcaatacaactttaagattgtcttgttcttataaagtaag 10580869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 33093458 - 33093510
Alignment:
Q  138 ctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||| |||||||||||||||||||| ||| ||||  | |||||||||||||    
T  33093458 ctcacacaattttcaatgcaactttaagtttatcttgatgttataaagtaagg 33093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 28044286 - 28044101
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgc 156  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| |||  |||||||  ||| |||||||||| |    
T  28044286 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttatcctctccaatttttctctcacacaattttcaatac 28044187  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||||||||    
T  28044186 aactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattttatttcttaat 28044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 36447757 - 36447570
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatg 155  Q
    ||||||| ||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||  ||| ||||||||  ||||||||||||||     
T  36447757 tttgttttaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctttccaacttttctctcacataattttcaatt 36447658  T
Q  156 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||| ||||||||||||||||||| | ||||||  |||||| |||||||||| | |||||||||||| |||||||||||    
T  36447657 caactttaattttatctttttcttataaagtaaagacagtttaataaaagagttatatccagtaattatttcattccatttcttaatc 36447570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 32275203 - 32275388
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttc--tcacataattttcaatgc 156  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| | | ||||||  ||||| ||||||||||||    
T  32275203 ttgtttcaaaatgaatgccactttacatttctaatacaactttaatttttttcttccaactttaccctctcaaacttttccttcacacaattttcaatgc 32275302  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||| ||||  ||||||||||||||||| |||||||| ||||||  || || |  |||||||||||||||  ||||||||||    
T  32275303 aactttaagtttgattttttcttataaagtaaaggcagtttagtaaaaacgtcatgtttaatgattatttcatttcatttcttaat 32275388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 240
Target Start/End: Original strand, 18886667 - 18886836
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||          |||||   |||| |||||||||||||    
T  18886667 tttgttttaaaatgaatctcactttacattttcaatacaactttaatttttttcttccaacttt----------tcttt---cacacaattttcaatgca 18886753  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 240  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||||    
T  18886754 actttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatatctaatgattatttcattccatttctta 18886836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 22627495 - 22627313
Alignment:
Q  65 caaaatgaatgtcactttacatttccaatacaactttaattttttc--cttccaactttaccctccccatcttttctc--acataattttcaatgcaact 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||| ||||||||  ||| ||||||||||||||||    
T  22627495 caaaatgaatgtcactttacatttccaatacaactttaatttttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaact 22627396  T
Q  161 ttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||| |||||||| || ||||||||||| |||||||| ||||| ||||||| |  || ||||||||||||  ||| |||||||    
T  22627395 ttaagtttgtcttatttttataaagtaaaggcagtttagtaaatgtgttatgtttaacgattatttcatttcattccttaatc 22627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 42121500 - 42121736
Alignment:
Q  10 cattctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttt 108  Q
    |||| |||| ||||||||||||||||| |||||||||| |         ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  42121500 cattatactccctccgttttaaaatgaatgtcactttagcaaaaaaaaattgtttcaaaatgaatgtcactttatatttccaatacaactttaatttttt 42121599  T
Q  109 tccttccaactttaccctccccatcttt--tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagt 206  Q
    | ||||||||||||| ||| ||| ||||  ||||| | |||||||||||||||||||| | | ||||||||| ||||||||||| |||||| ||||||||    
T  42121600 ttcttccaactttactctctccaacttttctctcaaacaattttcaatgcaactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaagt 42121699  T
Q  207 gttatatccaatgattatttcattcaatttcttaatc 243  Q
    | ||| || ||||||||||| |||  ||| |||||||    
T  42121700 gatatgtctaatgattatttgatttcattccttaatc 42121736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 17869192 - 17869431
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||||||||||||||||||||||||||| |        ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17869192 tactccctccgttttaaaatgagtgtcactttagcgaaaaaaatttgtttcaaaatgaatgtcattttacatttccaatgcaactttaattttttccttc 17869291  T
Q  115 caactttaccct---------ccccatcttt--tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaa 203  Q
    |||||||| |||         | | ||||||  ||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | || |||  ||||    
T  17869292 caactttatcctcaataaatactcaatcttttctctcacacaattttcaatgcaactttaagtttgtatttttcttataaagtaaagacaatttaataaa 17869391  T
Q  204 agtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| || |||||||||||||||  ||| |||||||    
T  17869392 agtgttatgtctaatgattatttcatttcattccttaatc 17869431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 41906089 - 41905894
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct--------ccccatcttttctc--acataat 147  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||||| ||||  ||||||||||||||          | ||| ||||||||  ||| |||    
T  41906089 tttgttttaaaataaatgtcactttacatttctaatacaactttaagttttctcttccaactttacctcaataaatactccaacttttctcttacacaat 41905990  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |  |||||||||||    
T  41905989 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcagttcatttcttaatc 41905894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 243
Target Start/End: Complemental strand, 34002277 - 34002091
Alignment:
Q  69 atgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataattttcaatgca 157  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||          ||| ||||||||  ||| |||||||||||||    
T  34002277 atgaatgtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgca 34002178  T
Q  158 actttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | ||| ||||||||||||||||||||||||||  |||||||||||    
T  34002177 actttaattttgtctttttcttataaagtaaagtgcagtttagcaaaggtgttatatccaatgattatttcatttcatttcttaatc 34002091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 40207576 - 40207379
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||||||||||||| ||        ||| |||||||||||||||| |||| ||||  ||||||||||||||||||| |||     
T  40207576 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgcttcaaaatgaatgtcattttatatttttaatacaactttaatttttttcttt 40207477  T
Q  115 caactttaccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 213  Q
    |||||||| ||||  || |||||| | || |||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  40207476 caactttatcctcttcaacttttc-ctcacaattttcaatgcaattttaagtttgtcattttcttataaagtaagggcagtttagtaaaagtgttatat 40207379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 33056433 - 33056243
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttaca---tttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttca 152  Q
    ||||||||||||| ||||||| ||||||   ||||||||||||||||||||||||| ||| ||||||| |||| ||| ||||||||  ||| ||||||||    
T  33056433 tttgtttcaaaataaatgtcattttacaacatttccaatacaactttaattttttctttc-aactttatcctctccaacttttctctcacacaattttca 33056335  T
Q  153 atgcaactttaattttgtctttttctta-taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||  ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |  |||||||||||||||  ||| |||||||    
T  33056334 atgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgattatttcatttcattccttaatc 33056243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 3681077 - 3680882
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acataat 147  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |         | | | ||||||||  ||| |||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctcacagaat 3680978  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| |||| || |||||||||||||||| |||| ||||||    
T  3680977 tttaaatgcaactttaaatttgtctttttcttataaagtaagagcagtttagtaaaagttttatgtctaatgattatttcattccattttttaatc 3680882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 34733394 - 34733500
Alignment:
Q  134 ttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 233  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||  |    
T  34733394 ttttctctcacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatttca 34733493  T
Q  234 tttctta 240  Q
    |||||||    
T  34733494 tttctta 34733500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 40298802 - 40299019
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||||||||||||| ||        |||||||||||||||||||||||||||||| |||||||||||||||||||| || |    
T  40298802 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctcc 40298901  T
Q  115 caactttaccct---------ccccatcttt--tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaa 203  Q
    ||||||||||||         | ||| ||||  ||||||| ||||||||||| |||||||| ||||||||||||||         ||||||||| |||||    
T  40298902 caactttaccctcaataaatactccaacttttctctcacacaattttcaatgtaactttaagtttgtctttttctt---------gggcagtttagtaaa 40298992  T
Q  204 agtgttatatccaatgattatttcatt 230  Q
    |||||||| |||||| |||||||||||    
T  40298993 agtgttatgtccaattattatttcatt 40299019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 1103482 - 1103678
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataa 146  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||         |  || ||||  ||||||| ||    
T  1103482 tttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaacttttctctcacacaa 1103581  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| |||||| |||| | ||   |||||||||||||  |||||||||||    
T  1103582 ttttcaatgtaactttaaatttgttttttttttataaagtaagggtagtttagtaaaaatgttttgtctggtgattatttcattttatttcttaatc 1103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 42259702 - 42259521
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatctttt--ctcacataat 147  Q
    |||||| ||||||||||| | ||||| ||| ||||||||||||||||||||| ||||||||||||||||          | | |||||  ||||||||||    
T  42259702 ttgttttaaaatgaatgttattttacgttttcaatacaactttaattttttc-ttccaactttaccctcaataaatactcaaacttttgtctcacataat 42259604  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| || ||| ||||| |||||    
T  42259603 tttcaatgcaactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgttatgtctaataattatctcatt 42259521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 43813543 - 43813431
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||||||||||||||||||||| ||||| ||       ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  43813543 tactacctccgttttaaaatgagtgtcgctttagccaacaaaatttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttcttc 43813444  T
Q  115 caactttaccctc 127  Q
    |||||||||||||    
T  43813443 caactttaccctc 43813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 26963478 - 26963643
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc----acata 145  Q
    |||||||||||| ||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||          ||| ||||||||    |||||    
T  26963478 ttgtttcaaaataaatgtctatttacatttccaatgcaactttaatttttttcttccaactttaccctcaatgaatactccaacttttctctctcacata 26963577  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  26963578 attttcaatgcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 26963643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 22597191 - 22597297
Alignment:
Q  21 ctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 120  Q
    |||||||| |||||||||||||||||| ||       ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  22597191 ctccgtttcaaaatgagtgtcactttagccaaaagaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactt 22597290  T
Q  121 taccctc 127  Q
    || ||||    
T  22597291 taacctc 22597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 19906413 - 19906555
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc---------cccatcttt--tctcacataat 147  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||          ||| ||||  |||| || |||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctcacaat 19906512  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||    
T  19906513 tttcaatgcaactttaagtttgtcttgttcctataaagtaagg 19906555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 26527544 - 26527357
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataattttcaat 154  Q
    ||||||||||| | ||||||||| |||||||||||||||||||| |||| ||||||| ||||          ||| |||||||   | ||||||||||||    
T  26527544 aaaatgaatgttattttacattttcaatacaactttaatttttttcttctaactttaacctcaataaatactccaacttttctgttaaataattttcaat 26527445  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||| ||| | |||||||||||||||||  ||||||| ||||| ||||||| || |||||||||| ||||| |||||||||||    
T  26527444 gcaactttaaattttt-tttttcttataaagtaaaagcagtttagtaaaggtgttatgtctaatgattattgcattccatttcttaatc 26527357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 30514972 - 30515037
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 30515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 211
Target Start/End: Complemental strand, 32345991 - 32345825
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacat 144  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||         | ||| ||||    |||||||     
T  32345991 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacac 32345892  T
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||    
T  32345891 aattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttat 32345825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 36836018 - 36836123
Alignment:
Q  19 tcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaac 118  Q
    |||||||||| |||||||||||| |||||  |       |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||    
T  36836018 tcctccgtttcaaaatgagtgtcgctttagtcaaaataatttgtttcaaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaac 36836117  T
Q  119 tttacc 124  Q
    ||||||    
T  36836118 tttacc 36836123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 42044178 - 42044066
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| |||||||||||| |||||| |        || ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  42044178 tactccctccgtttcaaaatgagtgtcgctttaatcaaaaaaaattatttcaaaattaatgtcactttacattttcaatacaactttaatttttttcttc 42044079  T
Q  115 caactttaccctc 127  Q
    |||||||||||||    
T  42044078 caactttaccctc 42044066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 19288499 - 19288434
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  19288499 tttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttctaactttaccctc 19288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 31416906 - 31416838
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctc 31416838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 18733415 - 18733502
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||||||||||||||||||| ||||| ||        |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18733415 tccgttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 18733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 19920419 - 19920358
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctc 19920358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 42010632 - 42010553
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattat 224  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||| | |||| || |||||||||    
T  42010632 aattttcaatgtaactttaagtttgtctttttcttataaaataagggcagtttagtaaaaatattatgtctaatgattat 42010553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 36447225 - 36447083
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||  |||||||||||| |||         | ||| ||||    ||||||| |    
T  36447225 ttgtttcaaaatgaatgtcattttacattttcaatacaattttaatttttctcttccaactttatcctcattaaatactccaacttttctctctcacaca 36447126  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaa 188  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  36447125 attttcaatgcaactttaagcttgtcttattcttataaagtaa 36447083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 39117638 - 39117479
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttt---tctcacataattttc 151  Q
    ||||||||||||||  ||||||||| |||||||||||||||| ||| |||||||| ||||||||          |||  |||   ||||||| |||||||    
T  39117638 tcaaaatgaatgtcgttttacattttcaatacaactttaattattttcttccaacattaccctcaatgaatactccaattttctctctcacacaattttc 39117539  T
Q  152 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  39117538 aatgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 39117479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 5723006 - 5723069
Alignment:
Q  63 ttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||||||    
T  5723006 ttcaaaatgaatgtcactttacattttcaatacaactttaatttttt-ctcctaactttaccctc 5723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 10684986 - 10684918
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 126  Q
    ||||||||||||||||||   |||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  10684986 tttgtttcaaaatgaatgctgctttacattttcaatgcaactttaatttttttcttccaactttaccct 10684918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 10684894 - 10684820
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  10684894 tctcacacaattttcaattcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 10684820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 48838750 - 48838652
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtcttt-----ttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| |||||||||||||||||||| |||||||||     || ||||||||||||| |||||| ||| || |||||| || |||||||||||||||    
T  48838750 tctcacacaattttcaatgcaactttaaatttgtctttttttatttttataaagtaaggtcagtttagtataaatgttatgtctaatgattatttcatt 48838652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 29001740 - 29001634
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||||| ||||||||||||||||||||||||||  |        |||||||||||| ||||||  ||||||||||||||| ||| |||||||| | ||||    
T  29001740 tacttcatccgttttaaaatgagtgtcactttagtcaaaaataattgtttcaaaattaatgtcgttttacatttccaatataaccttaattttattcttc 29001641  T
Q  115 caacttt 121  Q
    |||||||    
T  29001640 caacttt 29001634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 32873319 - 32873268
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  32873319 tttgttttaaaatgaatgtcactttatatttccaatacaattttaatttttt 32873268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 30833241 - 30833066
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc-----------ctccccatcttttctcacataattttcaat 154  Q
    ||||||||| ||| ||||||||| |||||||||||| ||||||| ||| ||||||||||           ||||   | |||||||||| |||||||| |    
T  30833241 aaaatgaatatcattttacattttcaatacaacttttatttttttctttcaactttaccttcaataaatactccaacttttttctcacacaattttcagt 30833142  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 231  Q
    | |||| ||| |||||||||||| ||||||  || | || ||| |||||||||||||||| ||| ||||||||||||    
T  30833141 gtaactctaagtttgtctttttcatataaaacaa-gacaatttagtaaaagtgttatatctaataattatttcattc 30833066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 6521907 - 6521960
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||    
T  6521907 tctcacacaattttcaatacaattttaagtttgtctttttcttataaagtaagg 6521960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 19277110 - 19277057
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttgtcttgttcatataaagtaagg 19277057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 47272240 - 47272313
Alignment:
Q  138 ctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    |||||| |||||||||||||| ||||  |||||||||||| ||||||  ||||||||||| |||||| ||||||    
T  47272240 ctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttat 47272313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 31416815 - 31416763
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    ||||||| |||||||||||||||||||| |||||||| |||||||||| ||||    
T  31416815 tctcacacaattttcaatgcaactttaaatttgtcttgttcttataaaataag 31416763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 33845478 - 33845391
Alignment:
Q  134 ttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||| || |||||||||||||||||||| ||||||||||||||         ||||||||| |||||||||||| ||  |||||||||||||||    
T  33845478 ttttctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttacatgtaatgattatttcatt 33845391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 40804977 - 40805073
Alignment:
Q  12 ttctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||||| ||||||||||||||||||||||| ||          ||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  40804977 ttctacttcttccgttttaaaatgagtgtcactctaga-taaaaaatttattttaaaataaatgtcactttacatttacaatacaactttaatttttt 40805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 36836148 - 36836199
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaa 188  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  36836148 tctcacataattttcaatgcaactttaaatttgtcttgtttctataaagtaa 36836199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 18733540 - 18733583
Alignment:
Q  134 ttttctcacataattttcaatgcaactttaattttgtctttttc 177  Q
    |||||||||| || ||||||||||||||||| ||||||||||||    
T  18733540 ttttctcacacaactttcaatgcaactttaaatttgtctttttc 18733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 42753705 - 42753744
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaa 97  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  42753705 tttgtttcaaaatgaatgtcactttcaatttccaatacaa 42753744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 5723090 - 5723128
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttt 175  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  5723090 tctcacacaattttcaatgcaactttaagtttgtctttt 5723128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 29001631 - 29001577
Alignment:
Q  135 tttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    ||||||||| |||||||||||||||||||| ||||| || ||| |||||| ||||    
T  29001631 tttctcacacaattttcaatgcaactttaagtttgttttgttcctataaaataag 29001577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 47271731 - 47271789
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaacttta-attttttccttccaactttac 123  Q
    |||||||||| |||| || ||||||||||||||||||  |||||| |||||||||||||    
T  47271731 aaaatgaatgacactctagatttccaatacaactttagttttttttcttccaactttac 47271789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 32873168 - 32873127
Alignment:
Q  200 taaaagtgttatatccaatgattatttcattcaatttcttaa 241  Q
    ||||| ||||||||| |||||||||| |||||||||||||||    
T  32873168 taaaaatgttatatctaatgattattgcattcaatttcttaa 32873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 48260008 - 48259822
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttc--tcacataattttcaatgc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||  ||||| ||||||||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctcaaacttttctttcacacaattttcaatgc 48259909  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| ||| |||||||||||||||| |||||||||||  |||||||||||| || || ||||||||||||| ||| |||||||    
T  48259908 aactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttatgtctaacgattatttcattctattccttaatc 48259822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 40061048 - 40060866
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgcaac 159  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||| ||| ||||||||  ||| |||||||||||||||    
T  40061048 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttttcaaactttaccctctccaacttttctcttacaaaattttcaatgcaac 40060949  T
Q  160 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    | |||  || |||||||||||||||||||||||| ||| ||||||||||||| || ||| |||||||||||  ||||||||||    
T  40060948 tataaaattatctttttcttataaagtaagggcaatttagtaaaagtgttatgtctaatcattatttcatttcatttcttaat 40060866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 11650056 - 11650251
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc----------cccatcttt-tctcacataat 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||          || || ||| ||||||| |||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaatttttctctcacacaat 11650155  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||| |||||| |  |||||| |||| |||||||||||||||||||||||    
T  11650156 ttccaatgcaactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaaatactatatctaatggttatttcattcaatttcttaatc 11650251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 24041155 - 24040983
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |             ||||||| |||||||||||||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 24041069  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| ||| |||||||    
T  24041068 actttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatc 24040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 84692 - 84477
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||||||| |||||||||||||| |         |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  84692 tactccctccgttttaaattgagtgtcactttagcaaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaatttttttcttc 84593  T
Q  115 caactttaccctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatc 214  Q
    ||| ||| |             |||| || |||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||||||||| ||    
T  84592 caatttttc-------------tctcgcacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtc 84506  T
Q  215 caatgattatttcattcaatttcttaatc 243  Q
     |||||||||||||||||||| |||||||    
T  84505 taatgattatttcattcaattccttaatc 84477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 243
Target Start/End: Complemental strand, 5317769 - 5317536
Alignment:
Q  21 ctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 120  Q
    |||||||| |||||||||||||||||| ||       |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  5317769 ctccgtttcaaaatgagtgtcactttatccaacaaaatttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactt 5317670  T
Q  121 taccct---------ccccatcttttctc-acataattttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgtt 209  Q
    ||||||         |  || ||||||||  || |||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| |||||||||||    
T  5317669 taccctcaataaatactacaacttttctctccacaattttcaatgcaactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgtt 5317570  T
Q  210 atatccaatgattatttcattcaatttcttaatc 243  Q
    || || |||||||||||||||  ||| |||||||    
T  5317569 atgtctaatgattatttcatttcattccttaatc 5317536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 43929683 - 43929876
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc----------cccatcttttctcacataatt 148  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||          ||  | || ||||||||||||    
T  43929683 ttgtttcaaaatgaatgtcaatttcagtttccaatacaactttaattttttccttccaactttaccctcaataaatactccacttttctctcacataatt 43929782  T
Q  149 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||| || ||||||||| || |||||||||||||||||||| || ||| | ||||||||||||| || |||||||||||||||||||||||||||    
T  43929783 ttcgatacaactttaagttagtctttttcttataaagtaatggaagtatagtaaaagtgttatgtctaatgattatttcattcaatttcttaat 43929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 1430666 - 1430495
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaac 159  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |             || |||| ||||| |||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaacttttc-------------tcacacacaatttccaatgcaac 1430580  T
Q  160 tttaattttgtctttttcttataaagtaagg-gcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||    
T  1430579 tttaagtttgtctttttcttataaagtaaagtgcagtttagtaaaagtgttatatctaattattatttcattaaatttcttaatc 1430495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 52403563 - 52403669
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 236  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  52403563 tctcacataattttcagtgcaactttaattttgtcttttccttataaagtaagggcagtttaataacagtgttatatccaatgattatttcattccattt 52403662  T
Q  237 cttaatc 243  Q
    |||||||    
T  52403663 cttaatc 52403669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 44582973 - 44582791
Alignment:
Q  20 cctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 119  Q
    ||||||||| ||||||||||||||||||||        ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  44582973 cctccgtttcaaaatgagtgtcactttaactaaaacaatttatttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaact 44582874  T
Q  120 ttaccct---------ccccatcttt----tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    |||||||         | ||| ||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44582873 ttaccctcaataaatactccaacttttctatctcacataattttcaatgcaactttaagtttgtctttttcttataaagtaag 44582791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 1428865 - 1429059
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataatt 148  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||| ||| |||||||||||||          | | ||||||||  ||| ||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaatacaacttaaatttttttcttgcaactttaccctcaataaatactcaaacttttctctcacacaatt 1428964  T
Q  149 ttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    | |||| ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  1428965 tccaattcaactttaagtttgtccttttcttataaagtaaagggcagtttagtaaaagtgttatatctaataattatttcattcaatttcttaat 1429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 50350057 - 50349817
Alignment:
Q  14 ctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaat--gtcactttacatttccaatacaactttaattttttcc 111  Q
    ||||| ||||||||| ||||||||| |||||||| ||        ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  50350057 ctactccctccgtttcaaaatgagtatcactttagccaaaaaaaattgtttcaaaatgaatatgtcactttacatttccaatacaactttaatttttttc 50349958  T
Q  112 ttccaactt--taccctccccatcttttctc--acataattttcaatgcaactttaattttgtctttttcttataa------agtaagggcagtttggta 201  Q
    ||||| ||   ||    | | | ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||      |||||||||||||| |||    
T  50349957 ttccacctcaataaatactcaaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagta 50349858  T
Q  202 aaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||| || |||||||||||||||| ||| ||||||    
T  50349857 aaagtgttatgtctaatgattatttcattccattccttaat 50349817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 230
Target Start/End: Complemental strand, 17919971 - 17919793
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca-----------tcttttctcacataatttt 150  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||   |           | |||||||||| ||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaactttaatttttttcttccaactttaccctcaatatatactctaacttttttctcacacaatttt 17919872  T
Q  151 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||| |||||||||||  ||||||  ||||||||||| ||||||||||||| |  |||||||||||||||    
T  17919871 caatgcaactttaagtttgtctttttaatataaaacaagggcagtttagtaaaagtgttatgt-taatgattatttcatt 17919793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 28751600 - 28751367
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaa-tgtcactttacatttccaatacaactttaattttttccttccaactt 120  Q
    ||||||| |||||||||||||||||| ||        || |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  28751600 tccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaaatgtcactttacattttcaatacaactttaatttttttcttccaactt 28751501  T
Q  121 taccctcc---------ccatcttttctcac--ataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgtt 209  Q
    |||||||          | | |||||||| |  | ||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| ||||    
T  28751500 taccctcaataaatactcaaacttttctctcgcacaattttcaatgtaactttaagtttgtccttttcttataaagtaagggcagtttagtaaaaatgtt 28751401  T
Q  210 atatccaatgattatttcattcaatttcttaatc 243  Q
    || || ||||||||||| |||  ||| |||||||    
T  28751400 atgtctaatgattattttatttcattccttaatc 28751367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 12002244 - 12002426
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc-----------ctccccatcttttctcacataat 147  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||           ||||   | |||||||||| |||    
T  12002244 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccagctttaccttcaataaatactccaacttttttctcacacaat 12002343  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||| |||||||| |||| ||  ||||||||||||||    
T  12002344 tttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttagtaaaagtattatgtctgatgattatttcatt 12002426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 230
Target Start/End: Complemental strand, 37437549 - 37437375
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca---tcttttctcacataattttcaatgc 156  Q
    ||||||||||||| | || |||||||||| |||||||| ||||||| ||| ||| |||||||| |||| | |   | || ||||||| ||||||||||||    
T  37437549 tgtttcaaaatgagtatcgctttacattttcaatacaattttaattattttctttcaactttatcctctctaattttttctctcacacaattttcaatgc 37437450  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggt-aaaagtgttatatccaatgattatttcatt 230  Q
    |||||||| |||||||||||||||||||||||||||| ||| || ||||||||||| || ||||| |||||||||    
T  37437449 aactttaagtttgtctttttcttataaagtaagggcaatttagtaaaaagtgttatgtctaatgaatatttcatt 37437375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 10691074 - 10690915
Alignment:
Q  70 tgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactttaattttg 169  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||| |||||||             | ||||||| |||||||||||||||||||| ||||    
T  10691074 tgaatgtcactttacattttcaatacaactataatttttttctttcaacttt-------------tatctcacacaattttcaatgcaactttaagtttg 10690988  T
Q  170 tctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||  ||||||| ||||||| |||||| ||||||||| |||||||||||||||  ||||||||||    
T  10690987 tctttttcttacgaagtaagtgcagtttagtaaaaatgttatatctaatgattatttcatttcatttcttaat 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 30006182 - 30006315
Alignment:
Q  104 ttttttccttccaactttaccctccccatcttttctcacata--attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggta 201  Q
    |||||| ||| ||||||||||||| ||| |||||||| || |  ||||||||||||||||||| ||| |||||||||||||||||||| ||| ||| |||    
T  30006182 tttttttctttcaactttaccctctccaacttttctctcaaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagta 30006281  T
Q  202 aaagtgttatatccaatgattatttcattcaatt 235  Q
    | |||||||| || ||||||||||||||||||||    
T  30006282 atagtgttatgtctaatgattatttcattcaatt 30006315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 38132322 - 38132202
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |           ||||||||| ||||||||||||||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacttttc-----------tttctcacacaattttcaatgcaa 38132234  T
Q  159 ctttaattttgtctttttcttataaagtaagg 190  Q
    |||||| | |||||| ||| ||||||||||||    
T  38132233 ctttaagtatgtcttgttcctataaagtaagg 38132202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 2458962 - 2459167
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| ||||||||||||  |||| ||       |||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||    
T  2458962 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttc 2459061  T
Q  115 caactttaccct---------ccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaag 205  Q
    ||||||||||||         | | | |||||||| || |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| ||||||     
T  2459062 caactttaccctcaacaaatactcaaacttttctctcacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaat 2459161  T
Q  206 tgttat 211  Q
    ||||||    
T  2459162 tgttat 2459167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 6332251 - 6332359
Alignment:
Q  134 ttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 233  Q
    |||||||||| ||||||||||| |||||||  |||||||||||| ||||||  || |||||||| ||||||||||||| || ||||||||||||||||||    
T  6332251 ttttctcacacaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtctaatgattatttcattcaa 6332350  T
Q  234 tttcttaat 242  Q
    |||||||||    
T  6332351 tttcttaat 6332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 43105659 - 43105562
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||| || | ||| ||||||||||||| || |||||||||||||||||||||||||||    
T  43105659 aattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatgtctaatgattatttcattcaatttcttaat 43105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 26252116 - 26252260
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatctttt----ctcacata 145  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||         | | | |||||    |||||| |    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatactctaacttttttctctcacaca 26252215  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  26252216 attttcaatgcaactttaagtttgtcttgttcttataaaataagg 26252260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 22664937 - 22665091
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacataattt 149  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||||||         | ||| ||| |||| || |||||    
T  22664937 ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatactccaacttctctctcacaattt 22665036  T
Q  150 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaa 204  Q
    | ||| ||||||||| |||||||| ||||||||||||||||  ||||| ||||||    
T  22665037 ttaattcaactttaagtttgtcttgttcttataaagtaaggttagtttagtaaaa 22665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 255068 - 254926
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccct---------ccccatctttt----ctcacat 144  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||         | ||| |||||    ||||||     
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactcacac 254969  T
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagta 187  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  254968 aattttcaatgcaactttaagtttgtctttttcttataaagta 254926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 12851739 - 12851807
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaatttttttctcccaactttaccctc 12851807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 44583769 - 44583963
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttct--cacataa 146  Q
    ||||||| |||||||||||||| ||||||||  ||||||||||||||||||| ||||  ||||||||||         | | | |||||||  ||||||     
T  44583769 tttgttttaaaatgaatgtcaccttacatttttaatacaactttaatttttttcttctgactttacccttaataagtactctaacttttctttcacatag 44583868  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||| |||| ||||||||||||||||||| ||| |||||||| | |||| |||||| || ||||||||||| |||  ||||||||||    
T  44583869 ttttcaatgcaacattaagtttgtctttttcttataaaataa-ggcagtttaggaaaattgttatgtctaatgattattttatttcatttcttaat 44583963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 17806567 - 17806392
Alignment:
Q  21 ctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 120  Q
    |||||||| |||||||||||||||||| ||        |||||| ||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||    
T  17806567 ctccgtttcaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgagtgtcgctttacatttccaatacaactttaattttttacttccaattt 17806468  T
Q  121 taccct---------ccccatcttttctcacat--aattttcaatgcaactttaattttgtctttttcttataaag 185  Q
    |||| |         | ||| |||||||| |||  |||||||||||||| ||||| ||||||||||||||||||||    
T  17806467 taccttcaataaatactccaacttttctctcatacaattttcaatgcaattttaagtttgtctttttcttataaag 17806392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 45377301 - 45377236
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctc 45377236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 15698905 - 15698726
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------ccca---tcttttctcacataat 147  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||        | ||   | || |||||||||||    
T  15698905 ttgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactctcaataaatactcaaacttttctctcacataat 15698806  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagta-agggcagtttggtaaaagtgttatatccaatgattattt 226  Q
    |||||||  |||||||| ||| |||||||||||||||||| | || |||||  | |||||||||| || |||||||||||    
T  15698805 tttcaatagaactttaagtttatctttttcttataaagtacatggtagtttatttaaagtgttatgtctaatgattattt 15698726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 43755016 - 43755187
Alignment:
Q  24 cgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 123  Q
    ||||| |||||||||||||||||| ||        || |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||       
T  43755016 cgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaacgtcactttacattttcaatacaactttaatttttt-cttccaactt--- 43755111  T
Q  124 cctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgtt 209  Q
              || ||||||| |||||||||  ||||||||| |||||||||||||||| ||||||||||  ||| |||||||||||    
T  43755112 ----------ttctctcacacaattttcaaaacaactttaagtttgtctttttcttattaagtaagggcgatttagtaaaagtgtt 43755187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 45749554 - 45749470
Alignment:
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 231  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||||| ||||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattc 45749470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 48320144 - 48319981
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacata-attttcaatgca 157  Q
    |||||| ||||| ||||| |||||| |||| |||||||| |||||||||||| ||| |||||||| ||| |||  || |||| || | | |||| |||||    
T  48320144 ttgttttaaaataaatgttactttatattttcaatacaaatttaattttttctttc-aactttactctctccaatttatctctcacacaatttcgatgca 48320046  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt 222  Q
    ||||||| ||||||||| | |||||||||||||||| ||| |||||||| |||| || |||||||    
T  48320045 actttaagtttgtctttcttttataaagtaagggcaatttagtaaaagtcttatgtctaatgatt 48319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 44024499 - 44024611
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||||||||||||||||||||| ||||| |         ||||||||||||||||| | |||||||||| |||| ||||||||||||||| ||||    
T  44024499 tactccctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgccgctttacattttcaatgcaactttaatttttttcttc 44024598  T
Q  115 caactttaccctc 127  Q
    |||||||||||||    
T  44024599 caactttaccctc 44024611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 2245791 - 2245981
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacat----aattttca 152  Q
    |||||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||          | | |||||||| | |    ||||||||    
T  2245791 aaaatgaatgtcaccttacattttcaatacaactttaatctttttctttcaactttaccctcaataaatactcaaacttttctctctttcacaattttca 2245890  T
Q  153 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||| |||||| |||||||||||||||||||| || | |||||| |||||| | |||| |  |||||||| ||||||| |||||||||||    
T  2245891 atgcatctttaagtttgtctttttcttataaaggaatgacagtttagtaaaaatattatgtttaatgattacttcattccatttcttaatc 2245981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 49894807 - 49894943
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactt 161  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||             || ||||||| ||||||||||| |||||    
T  49894807 tttcaaaatgaatgttattttacatttccaatacaactttaatttttttcttctaactt-------------ttctctcacacaattttcaatgtaactt 49894893  T
Q  162 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  49894894 taagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 49894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 50158458 - 50158277
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccc---------tccccatcttt--tctcacataattt 149  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||         || ||| ||||  ||||||| |||||    
T  50158458 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaacctcaaaaaattctccaacttttctctcacacaattt 50158359  T
Q  150 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    | |||||||||||||||           |||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||  |||||||||||    
T  50158358 t-aatgcaactttaatt-----------ttataaagcaagggaagtttagtaaaagtgttatatccaatgattattgcattatatttcttaatc 50158277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 40719020 - 40719195
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc-----------ctccccatcttttctcacataattttcaat 154  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||           ||||   | |||||| ||| |||| |||||    
T  40719020 aaaatgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttcttacacaattctcaat 40719119  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
     ||||||||| ||| |||||||| ||||||  || |||||||| |||||| ||| || || |||||||||||||||    
T  40719120 acaactttaaatttatctttttcatataaaacaatggcagtttagtaaaaatgtgatgtctaatgattatttcatt 40719195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 5854381 - 5854238
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacat 144  Q
    ||||||||| ||| |||||| ||||||||||||||| |||||||||||||||  ||||||||||| |||         | ||| ||||    |||||||     
T  5854381 tttgtttcagaataaatgtcgctttacatttccaatgcaactttaatttttttattccaactttatcctcaataaatactccaacttttcgatctcacac 5854282  T
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaa 188  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||    
T  5854281 aattttcaatgcaaccttaaggttgtctttttcttataaagtaa 5854238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 26582923 - 26582985
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaatttttttcttcgaacttt 26582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 28200379 - 28200310
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaa-tacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||| || ||||||| ||| | ||||||||||||||| |||||||||||||||||    
T  28200379 ttgtttcaaaatgaatgtcgctctacattttcaaatgcaactttaatttttttcttccaactttaccctc 28200310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 9552420 - 9552368
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  9552420 tctcacataattttcaatgcaactttaagattgtcttgttcttataaagtaag 9552368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 9552484 - 9552436
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttt 107  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttt 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 15647215 - 15647150
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 126  Q
    |||||||||||||||||||||||||||||| |||||||| |||  |||||| || |||||||||||||    
T  15647215 ttgtttcaaaatgaatgtcactttacattttcaatacaaattt--tttttttctcccaactttaccct 15647150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 43738408 - 43738344
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 123  Q
    |||||| |||||||||||||||| |||||| ||||||||||| |||||||| ||| |||||||||    
T  43738408 ttgttttaaaatgaatgtcacttcacattttcaatacaacttaaatttttttctttcaactttac 43738344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 11134614 - 11134548
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||  |||||||||| |||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttctt-tttccaactttgccctc 11134548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 42650402 - 42650339
Alignment:
Q  61 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||||| |||||| |||||||    
T  42650402 gttttaaaataaatgtcgctttacatttctaatacaactttaatttttttcttccagctttacc 42650339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 42650314 - 42650261
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||    
T  42650314 tctcacacaattttcaatgcaattttaagtttgtctttttcttataaactaagg 42650261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 52403482 - 52403542
Alignment:
Q  67 aaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||| |||| |||||||||||||| ||||   ||||||||||||||||    
T  52403482 aaatgaatgtcactttaaattttcaatacaactttaagttttctattccaactttaccctc 52403542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 672346 - 672300
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataa 183  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  672346 tctcacacaattttcaatgcaaatttaagtttgtctttttcttataa 672300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 672460 - 672397
Alignment:
Q  20 cctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcacttta 83  Q
    |||||||||||||||||||||||||||| ||       ||||||| ||||||||||||||||||    
T  672460 cctccgttttaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcacttta 672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 35149436 - 35149394
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagta 187  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  35149436 aattatcaatgcaactttaattttatctttttcttataaagta 35149394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 35149535 - 35149485
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||| |||| ||| |||||||| |||||||||||||||||||||||||    
T  35149535 ttgtttcgaaataaatttcactttatatttccaatacaactttaatttttt 35149485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 50591446 - 50591388
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaacttt 121  Q
    ||||||||||||||  |||||||| ||||||||||||||||| |||| |||||||||||    
T  50591446 tcaaaatgaatgtcgttttacattaccaatacaactttaattttttttcttccaacttt 50591388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 6332164 - 6332229
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttac 123  Q
    |||||| |||||||||||||||||||||||  || |||||||||| |||||| ||| |||||||||    
T  6332164 ttgttttaaaatgaatgtcactttacatttttaacacaactttaattttttttctttcaactttac 6332229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 28200279 - 28200234
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||    
T  28200279 aattttcaatacaactttaagtttgtatttttcttataaagtaagg 28200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 43738311 - 43738214
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||| | |||||||  ||| ||||||||||||||||||| || ||||| |||||| | |||| || ||| ||||||| |||  ||||||||||    
T  43738311 aattttcaaagtaactttatatttatctttttcttataaagtaaaggtagtttagtaaaaatattatgtctaataattattttatttcatttcttaat 43738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 9333105 - 9333168
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaacttt 121  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||| |||||| |||||||||||    
T  9333105 ttgttttaaaataaatgttactttacatttctaatacaattttaattttttttcttccaacttt 9333168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 9356878 - 9356941
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaacttt 121  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||| |||||| |||||||||||    
T  9356878 ttgttttaaaataaatgttactttacatttctaatacaattttaattttttttcttccaacttt 9356941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 43105772 - 43105692
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaacttta 102  Q
    ||||||| ||| ||||||||| |||||||       ||| ||| |||||||||||||| |||||||| |||||||||||||    
T  43105772 tccgtttcaaagtgagtgtcattttaaccaaaacaatttattttaaaatgaatgtcaccttacattttcaatacaacttta 43105692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 12851836 - 12851870
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttctt 179  Q
    |||||| ||||||||||||||||||||||||||||    
T  12851836 aatttttaatgcaactttaattttgtctttttctt 12851870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 50249264 - 50249331
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcacttt 82  Q
    |||| |||| ||||||||||||||||| ||||| ||       |||||||||||||||||||||||||    
T  50249264 tactccctctgttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcacttt 50249331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 50591381 - 50591309
Alignment:
Q  139 tcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||| |||||||||||||| ||||| |||||||| ||| |||||| |||||  | ||| |||||| ||||||    
T  50591381 tcacacaattttcaatgcaattttaagtttgtcttgttcctataaaataaggttattttagtaaaattgttat 50591309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 12219 - 12041
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatgcaacttta 163  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| | | ||||  ||||||| |||||||||||||||||||    
T  12219 aaaatgaatgtcattttacatttccaatataactttaatttttttcttccaactttaccctctcaaacttttctctcacacaattttcaatgcaacttta 12120  T
Q  164 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    | ||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||| ||| |||||||    
T  12119 agtttgtctttttcttataaagtaa-ggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatc 12041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 7612452 - 7612690
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||| ||||||||||||||||||||||||         |||||| ||||||||||||||||||||||| ||||||||| |||| ||||  ||||    
T  7612452 tactccctcccttttaaaatgagtgtcactttaacaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttc 7612551  T
Q  115 caactttaccct---------ccccatcttttctc--acataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaa 203  Q
    ||||||||||||         | ||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  7612552 caactttaccctaaataaatactccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagt-aa 7612650  T
Q  204 agtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    || ||||||||||||||||||||||||| |||||||||||    
T  7612651 agcgttatatccaatgattatttcattctatttcttaatc 7612690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 1774251 - 1774085
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    |||||||||||||||||||||||||| ||        |||||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  1774251 tccgttttaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaacttt 1774152  T
Q  122 accctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaa 188  Q
    || ||| | | ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  1774151 acgctctctaacttttctcttacaattttcaatgcaactttaattttgtctttttcttataaagtaa 1774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 22601090 - 22601315
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| ||||||||| || ||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  22601090 tactccctccgtttcaagatgagtgtcactttagccaaaaagttttgtttcaaaatgaatgtcactttacatttccaatacaactttaattgttt-cttc 22601188  T
Q  115 caactttaccctc----------cccatcttt-tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaa 203  Q
    |||||||||||||          || | |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | || ||| |||||    
T  22601189 caactttaccctcgataaatactccaacctttctctcacagaattttcaatgcaactttaagtttgtctttttcttataaagtaaagacaatttagtaaa 22601288  T
Q  204 agtgttatatccaatgattatttcatt 230  Q
    || ||||| || |||||||||||||||    
T  22601289 agagttatgtctaatgattatttcatt 22601315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 219
Target Start/End: Complemental strand, 29931386 - 29931224
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgc 156  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||| ||| | | ||||||||  ||||||||||||||||    
T  29931386 ttgttttaaaataaatatcactttacatttccaatacaactttaatttttttcttctaactttactctctcaaacttttctctcacataattttcaatgc 29931287  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 219  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||  |||||||||||||| |||||    
T  29931286 aactttaattttttctttctcttataaaataaaggcagtttaataaaagtgttatattcaatg 29931224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 27109976 - 27109780
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataa 146  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||         | | | ||||  ||||||| ||    
T  27109976 tttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctcacacaa 27109877  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||| |||||||||||||| |||||| |||||||||||||| || | || ||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  27109876 tttccaatgcaactttaagtttgtccttttcttataaagtaaaagacaatttagtaaaagtgttatatctaatgattatttcattctatttcttaat 27109780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 45187440 - 45187255
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgca 157  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||| |||  ||| ||| |||| | | |||||||| || ||||||||| |||    
T  45187440 tttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttcttttaacattatcctctctaacttttctctcacaattttcaaagca 45187341  T
Q  158 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||| |||||||||||||||||||  |||| |||||| |||||||||| || || |||||||||||||||  ||| |||||||    
T  45187340 actttaagtttgtctttttcttataaaacaaggacagtttagtaaaagtgtcatgtctaatgattatttcattatattccttaatc 45187255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 9022348 - 9022589
Alignment:
Q  14 ctacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcctt 113  Q
    ||||| ||||||||||||||||||| ||| |||| ||        |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||    
T  9022348 ctactccctccgttttaaaatgagtatcattttagccaaaaagaattgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttctt 9022447  T
Q  114 ccaactttaccct---------cccca--tcttttctcacataattttcaatgcaac-tttaattttgtctttttcttataaagtaagggcagtttggta 201  Q
    |||||||||||||         | |||  | |||||||||| ||||||||||||||| ||||| |||||||||||| ||||||  ||| ||||||| |||    
T  9022448 ccaactttaccctcaataaatactccaacttttttctcacacaattttcaatgcaacttttaagtttgtctttttcatataaaacaagtgcagtttagta 9022547  T
Q  202 aaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||| || |||||||| ||||||| |||| ||||||    
T  9022548 aaagtgttatgtctaatgattaattcattccattttttaatc 9022589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 16208951 - 16209102
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatgcaac 159  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||  || |||||||||  || ||||  |||||||||||||||||||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttaaattttaccctctacaacttttctctcacataattttcaatgcaac 16209050  T
Q  160 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||| |||||||||||| |||||| ||||| ||| ||  ||||||||||||    
T  16209051 tttaagtttgtctttttcctataaaataaggacagattaataaaagtgttat 16209102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 243
Target Start/End: Complemental strand, 38329221 - 38329014
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||| ||||||||||||||||||  |       ||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||    
T  38329221 tccgtttcaaaatgagtgtcactttagtcaaaaaaatttgttttaaaatgaatgtcactttatattttcaatacaactttaatttttttctttcaacttt 38329122  T
Q  122 accctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 221  Q
    ||||||             ||| |||||||||||||||||||| ||||||||||  ||||||||||| |||||||| ||||||||||||| || ||||||    
T  38329121 accctc-------------acacaattttcaatgcaactttaagtttgtcttttgattataaagtaa-ggcagtttagtaaaagtgttatgtctaatgat 38329036  T
Q  222 tatttcattcaatttcttaatc 243  Q
    |||||||||| ||| |||||||    
T  38329035 tatttcattccattccttaatc 38329014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 230
Target Start/End: Original strand, 30788934 - 30789115
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acataatt 148  Q
    ||||| ||||| ||||||||||||||| | |||||||||||||||||||| |||| |||||||||||         | ||| ||||||||  ||||||||    
T  30788934 tgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatactccaacttttctctcacataatt 30789033  T
Q  149 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||| ||||||||| ||||||||||||||||||||||||| || |||  |||||||||||| || |||||||||||||||    
T  30789034 ttcaatacaactttaaatttgtctttttcttataaagtaaggacaatttaataaaagtgttatgtctaatgattatttcatt 30789115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 36915365 - 36915558
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc-----------ctccccatcttttctcacataat 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||            ||  ||| |||||||||  |||    
T  36915365 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatattcaacattttttctcac--aat 36915462  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||| ||| |||||| | |||| || |||||||||||||||| ||| |||||||    
T  36915463 tttcaatgcaactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaatc 36915558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 34168355 - 34168224
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca-----tcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||   |     |||| ||||||| ||||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactcttctctcacacaattttcaatgcaa 34168256  T
Q  159 ctttaattttgtctttttcttataaagtaagg 190  Q
    |||||| |||||||| ||||||||||||||||    
T  34168255 ctttaagtttgtcttgttcttataaagtaagg 34168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 2067788 - 2067893
Alignment:
Q  138 ctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttc 237  Q
    |||||| |||||| |||||||||||||||| ||||||| |||||||||||||||||||||  |||||| |||||||| |||||||||||||||| |||||    
T  2067788 ctcacacaatttttaatgcaactttaatttggtcttttccttataaagtaagggcagtttaataaaagcgttatatcaaatgattatttcattccatttc 2067887  T
Q  238 ttaatc 243  Q
    ||||||    
T  2067888 ttaatc 2067893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 7129262 - 7129475
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||| ||||||||||||||||||||         || ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  7129262 tccgtttcaaaatgagtgtcactttaacaaaaaaaaattatttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaacttt 7129361  T
Q  122 accctccccatcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 221  Q
     |             ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||   |||||| ||||||| ||||||| |||||||    
T  7129362 tc-------------tctcacacaatttccaatgcaactttaattttgtcttattcttataaagtaaaatcagtttagtaaaagcgttatattcaatgat 7129448  T
Q  222 tat-----ttcattcaatttcttaatc 243  Q
    |||     ||||||| |||||||||||    
T  7129449 tatactatttcattccatttcttaatc 7129475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 6839215 - 6839400
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acataattttcaatgc 156  Q
    |||||| ||||||||| | |||||||||||  || | ||||||||||||||  ||  ||||||| | |  ||| ||||||||  ||||||||||||||||    
T  6839215 ttgttttaaaatgaattttactttacatttttaaaataactttaattttttttttt-aactttatcatttccaacttttctctcacataattttcaatgc 6839313  T
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    || ||||  ||||||||||||||||||||||| |||| ||| ||||||||||||| || |||||||||||||||| |||| ||||||    
T  6839314 aattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattatttcattccattttttaatc 6839400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 18666672 - 18666534
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaactt 161  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| |             ||||||| |||||| ||||||||||    
T  18666672 tttcaaaatgaatgtcactttacatttccaatgcaactttagtttttttcttccaacttttc-------------tctcacacaatttttaatgcaactt 18666586  T
Q  162 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 213  Q
    || | |||||||||||||||||||||||| |||||| |||||||||||||||    
T  18666585 tagtgttgtctttttcttataaagtaaggacagtttagtaaaagtgttatat 18666534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 8471279 - 8471399
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| |           | ||||||| ||||||||||||||    
T  8471279 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaacttttc-----------tctctcacacaattttcaatgcaa 8471367  T
Q  159 ctttaattttgtctttttcttataaagtaagg 190  Q
    |||||| |||||||||||||||||||||||||    
T  8471368 ctttaagtttgtctttttcttataaagtaagg 8471399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 32326875 - 32326684
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaatttttt-ccttccaactttaccc-----------tccccatcttttctcacataattttc 151  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||           |||   | |||||||||| |||||||    
T  32326875 tcaaaataaatgtcactttacattttcaatacaactttaatttttttcctttcaattttacccacaataaatactccaacttttttctcacacaattttc 32326776  T
Q  152 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||||| ||||||||||||  || |||||||||||||||  ||| |||||||    
T  32326775 aatgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgtctaatgattatttcatttcattccttaatc 32326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 14541900 - 14541737
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacataat 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||         |  || ||||  |||| || |||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaacttttctctctcacaat 14541801  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||||||||||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  14541800 tttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgttat 14541737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 41414799 - 41415012
Alignment:
Q  18 ttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaa 117  Q
    ||||||| ||||||||| |||||| ||||| ||       ||| ||| ||||| |||||||||||| ||||  ||||  ||||||||||||| |||||||    
T  41414799 ttcctccattttaaaataagtgtctctttagccaaaaatatttattttaaaataaatgtcactttatatttttaatatcactttaatttttttcttccaa 41414898  T
Q  118 ctttaccctcccca--tcttttctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcc 215  Q
     |||||| ||| ||  | |||||||||| ||||||||||||||||||||  || |  |||| ||||||| ||||||||| || ||||||||||||  ||     
T  41414899 ttttaccttcctcaacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtct 41414997  T
Q  216 aatgattatttcatt 230  Q
    |||||||||||||||    
T  41414998 aatgattatttcatt 41415012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 156239 - 156358
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacataattttcaatgcaa 158  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||||  ||| | | || |||| || |||||||||| |||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaatttttttctcccaactttactttccac-ttttctctcgcacaattttcaatacaa 156337  T
Q  159 ctttaattttgtctttttctt 179  Q
    |||||| |||||| |||||||    
T  156338 ctttaagtttgtccttttctt 156358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 2803393 - 2803268
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc---cttccaactttaccctccccatcttttctcacataattttcaat 154  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||   || |||||||||||||||   | || |||  || ||||||||||    
T  2803393 tttgtttcaaaataaatgtcactttacattttcaatacaattttaattttttctccctcccaactttaccctccaacttttctcttgcacaattttcaat 2803294  T
Q  155 gcaactttaattttgtctttttctta 180  Q
     ||||||||| |||||||||||||||    
T  2803293 tcaactttaagtttgtctttttctta 2803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 11336098 - 11335998
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||| |||| ||| ||||||  ||||    
T  11336098 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa------tttagtaaaagtgttatatcgaatggttacttcattacattt 11336005  T
Q  237 cttaatc 243  Q
    |||||||    
T  11336004 cttaatc 11335998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 34461737 - 34461670
Alignment:
Q  61 gtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctc 34461670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 32737859 - 32737958
Alignment:
Q  143 ataattttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaa 241  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||   |||||||||||||| |||||| |||||||||||||||||||    
T  32737859 ataattttcaatgcaa-tttaagtttttctttttcttataaagtaaagggcagtttaacaaaagtgttatatctaatgat-atttcattcaatttcttaa 32737956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 41790268 - 41790113
Alignment:
Q  63 ttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctcacataattttcaatgcaactt 161  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||| |             ||||||| |||||||||| ||||||    
T  41790268 ttcaaaatgaatgtcactttacatttctaatacaactttaattttttttctttcaacttttc-------------tctcacacaattttcaatccaactt 41790182  T
Q  162 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    ||| |||||||||||||||||||| || | || |||  ||||||| |||| || |||||||||||||||    
T  41790181 taaatttgtctttttcttataaagcaaagacaatttaataaaagtattatgtctaatgattatttcatt 41790113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 26438980 - 26439102
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctc--acataattttcaatgcaacttt 162  Q
    |||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||| |||| | | ||||||||  ||| ||||||||||||||||||    
T  26438980 aaaatgaatgccactttacatttcca-tacaactttaattttttttcttccaactttatcctctcaaacttttctctcacacaattttcaatgcaacttt 26439078  T
Q  163 aattttgtctttttcttataaagtaa 188  Q
    || ||||  ||||| |||||||||||    
T  26439079 aagtttg--tttttgttataaagtaa 26439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 3095656 - 3095590
Alignment:
Q  61 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaactttaattttttcctcccaactttaccctc 3095590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 24732079 - 24732141
Alignment:
Q  181 taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  24732079 taaagtaggggcagtttagtaaaagtgttatatccaatgactatttcattcaatttcttaatc 24732141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 5588628 - 5588563
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5588628 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 5588563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 11257540 - 11257731
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catcttttctc--acataat 147  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||  |||           || ||||||||  ||| |||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaattttt--cttccaactttaatctcaataaatacttcaacttttctctcacacaat 11257637  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| || ||||| |||||| |||| | |  ||| |||||||||||| ||||||||||    
T  11257638 tttcaatgcaactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaaatgtt-tttttaataattatttcattccatttcttaat 11257731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 33870724 - 33870817
Alignment:
Q  31 aaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    ||||||||||| ||||||||       ||| |||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  33870724 aaatgagtgtcgctttaaccaaaataatttatttcaaaatggatgtcactttatattttcaatacaactttaatttttttcttccaactttacc 33870817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 27416502 - 27416565
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||    
T  27416502 tttcaaaatgaatgtcactttacatttccaatacaactttagttttt--cgtccaactttaccctc 27416565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 8382625 - 8382564
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctc 8382564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 39970323 - 39970390
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| |||||| || ||||||||||||||    
T  39970323 ttgtttcaaaatgaatgttactttacatttccaatacaacattagtttttt-ctcccaactttaccctc 39970390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 8107304 - 8107191
Alignment:
Q  69 atgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacataattttcaatgcaactttaatt 166  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||  || ||||  ||| ||| ||||  ||||| | ||||||||||  |||||||| |    
T  8107304 atgaatgtcactttacattttcaatacaactttaatttttttttttaaattttattctctccaacttttctctcagacaattttcaatagaactttaaat 8107205  T
Q  167 ttgtctttttctta 180  Q
    ||||||||||||||    
T  8107204 ttgtctttttctta 8107191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 35052469 - 35052531
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||||| ||| |||||||    
T  35052469 ttgttttaaaatgaatgtcgttttacatttccaatacaactttaatttttttctttcaacttt 35052531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 32661310 - 32661371
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||| || ||||||||||||||    
T  32661310 aaaatgaatgttactctacattttcaatacaactttaatttttttctcccaactttaccctc 32661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 32061612 - 32061515
Alignment:
Q  25 gttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 122  Q
    ||||||||||||||||||||||||          |||||| ||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||    
T  32061612 gttttaaaatgagtgtcactttaaataaaaaaaattgttttaaaatgaatgtcactttacattttctatacaaatttaattattttcttccaacttta 32061515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 42946120 - 42946188
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||||| ||| ||| |||||||||    
T  42946120 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttctttcaattttaccctc 42946188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 5588512 - 5588427
Alignment:
Q  157 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| ||||||||||||||||||| | ||| |||||| |||||| |||||| |  |||||||||||||||  |||||||||||    
T  5588512 aactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatc 5588427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 18673247 - 18673189
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||||||||| |||||||||| |||| | ||||||||||||| ||||||||||||||    
T  18673247 aaaatgaatgtcgctttacattttcaatgcgactttaatttttttcttccaactttacc 18673189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 2812915 - 2812968
Alignment:
Q  189 gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  2812915 gggcagtttagtaaaagtgttatgtctaatgattatttcattcaattacttaat 2812968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 13108989 - 13109045
Alignment:
Q  62 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 119  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||    
T  13108989 tttcaaaatgaatgtcattttacattttcaatgcaactttaatttttt-cttccaact 13109045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 27416593 - 27416643
Alignment:
Q  140 cacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||| |||||||||||||| | ||| |||||||||||||||||||||||||    
T  27416593 cacacaattttcaatgcaattctaagtttgtctttttcttataaagtaagg 27416643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 42710046 - 42709949
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||| |||||||||||||| ||||||| | |||||||||||  ||||| ||  |||||| || || |||||| |||| ||| ||||||||||||    
T  42710046 aattttcaacgcaactttaattttatctttttttaataaagtaaggatagtttagt-caagtgtcatgtctaatgataattttatttaatttcttaatc 42709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 2812817 - 2812858
Alignment:
Q  68 aatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  2812817 aatgaatgttgctttacatttccaatacaactttaatttttt 2812858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 13109076 - 13109129
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||| ||||||| ||||| ||||||||||||||||||| |||||    
T  13109076 tctcacacaatttttaatgcaaatttaaatttgtctttttcttataaaataagg 13109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 39970412 - 39970496
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||| || |||||||||||||||||||| ||||||||||||||         ||||||||| ||||||||| ||| || |||||||||||||||    
T  39970412 tctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtggtatgtctaatgattatttcatt 39970496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 5044290 - 5044218
Alignment:
Q  139 tcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 211  Q
    ||||| |||||| ||| ||||||||| ||||| ||||| |||||||||||| |||||||  ||||||| ||||    
T  5044290 tcacacaatttttaatacaactttaaatttgtattttttttataaagtaagagcagtttaataaaagtattat 5044218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 34461647 - 34461595
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaag 189  Q
    ||||||| |||||||||||||||||||| |||||||| ||| | |||||||||    
T  34461647 tctcacacaattttcaatgcaactttaagtttgtcttgttcatgtaaagtaag 34461595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 3203325 - 3203368
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaacttta 102  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||    
T  3203325 ttgtttcaaaataaatgtcactttacattttcaatgcaacttta 3203368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 35052560 - 35052603
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttctta 180  Q
    ||||||||||||||||||||||||||||  || |||||||||||    
T  35052560 tctcacataattttcaatgcaactttaaacttatctttttctta 35052603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 43938125 - 43938168
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||    
T  43938125 aaaatgaatgccactttacatttcgaatagaactttaatttttt 43938168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 2067725 - 2067770
Alignment:
Q  63 ttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||    
T  2067725 ttcaaaatgaatgtca-tttacattttcaatacaattttaatttttt 2067770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 88
Target Start/End: Original strand, 11335839 - 11335869
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacattt 88  Q
    |||||||||||||||||||||||||||||||    
T  11335839 tttgtttcaaaatgaatgtcactttacattt 11335869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 32061468 - 32061419
Alignment:
Q  193 agtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||||| ||||||||||||| ||  ||||||||||| ||||||||||||||    
T  32061468 agtttagtaaaagtgttatgtctgatgattatttcgttcaatttcttaat 32061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 3095525 - 3095473
Alignment:
Q  190 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||| |||||||||| ||||  |||||||||||||||| |||| |||||    
T  3095525 ggcagtttagtaaaagtgtcatatttaatgattatttcattctattttttaat 3095473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 11165482 - 11165514
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcacttta 47  Q
    |||| ||||||||||||||||||||||||||||    
T  11165482 tactccctccgttttaaaatgagtgtcacttta 11165514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 15 - 242
Target Start/End: Complemental strand, 1924862 - 1924634
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||| |||| |||||||||||||||||| ||       ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||  |||    
T  1924862 tactccctctgtttcaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaattttttttttc 1924763  T
Q  115 caactttaccctccccatcttttctc--acataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttata 212  Q
     ||||| |||||| ||| ||||||||  ||| |||||||||||||||||||||||||| |||| ||||||||||||| | ||||| ||||||  ||||||    
T  1924762 -aacttcaccctctccaacttttctctcacacaattttcaatgcaactttaattttgtattttccttataaagtaagagaagtttagtaaaaacgttata 1924664  T
Q  213 tccaatgattatttcattcaatttcttaat 242  Q
    ||||||||||||||||||  ||||||||||    
T  1924663 tccaatgattatttcattatatttcttaat 1924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 12828835 - 12828653
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catcttttctc--acataat 147  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||           || ||||||||  ||| |||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 12828736  T
Q  148 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  12828735 tttcaatgcaactttaagcttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatt 12828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 26669247 - 26669057
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataattttca 152  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| ||||          ||| ||||||||  ||||||||||||    
T  26669247 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 26669148  T
Q  153 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||||||||  |||||||||||    
T  26669147 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatc 26669057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 29915539 - 29915735
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctcc---------ccatcttttctc--acataa 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||| ||||||||  ||| ||    
T  29915539 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 29915638  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaag-ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||| |||||||||||||  |||||||||||||||||||||||  |||||||| ||||||||||||| || ||| |||||||||||||||||||||||    
T  29915639 tttccaatgcaactttatgtttgtctttttcttataaagtaaatggcagtttagtaaaagtgttatttctaattattatttcattcaatttcttaat 29915735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 29927205 - 29927401
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttttctcaca--taa 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||         | ||| |||||||| ||  ||     
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcatgtag 29927304  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |  || ||||||||||||| || |||||||||||||||| |||| ||||||    
T  29927305 ttttcaatgcaactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatgtctaatgattatttcattctattttttaatc 29927401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 31275796 - 31275613
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctcc---------ccatctttt--ctcacataa 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||| |||||  |||||| ||    
T  31275796 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 31275697  T
Q  147 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 230  Q
    |||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||  || |||| ||||||||||    
T  31275696 ttttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttggtaaaagtgttacgtctaatggttatttcatt 31275613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 23936735 - 23936543
Alignment:
Q  60 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacataatttt 150  Q
    ||||||||||||||||| ||||||||||| |||| ||||||| ||||||| |||||||||||||||||          ||| | |||||| || ||||||    
T  23936735 tgtttcaaaatgaatgttactttacattttcaatgcaactttcatttttttcttccaactttaccctcaatatatactccaacctttctctcacaatttt 23936636  T
Q  151 caatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||| ||  |||||| ||||||||| |||||||||||||||| ||||||||||    
T  23936635 caatgcaactttaaatttgtttttttcttataaagtaaagggcaattcagtaaaaatgttatatctaatgattatttcattccatttcttaat 23936543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 32258676 - 32258906
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 114  Q
    |||| |||||||||||| |||||||| ||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  32258676 tactacctccgttttaagatgagtgttactttaacaaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttc 32258775  T
Q  115 caactttaccct----------ccccatcttt---tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggta 201  Q
    |||||||| |||          | ||| ||||   ||||||| ||||||||||||||||||||||           |||||||| ||||||||||| |||    
T  32258776 caactttaacctaaaaaaaatactccaactttttctctcacacaattttcaatgcaactttaatt-----------ttataaagcaagggcagtttagta 32258864  T
Q  202 aaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||| |||||||||||||||||||||| || |||||||||||    
T  32258865 aaagcgttatatccaatgattatttcaatcgatttcttaatc 32258906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 34439607 - 34439368
Alignment:
Q  19 tcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaac 118  Q
    |||||||||||||||||| ||||||||||| |        |||||||||||||||||||| |||||||||||||||||||||| ||| |||| |||||||    
T  34439607 tcctccgttttaaaatgaatgtcactttaatcaaaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaactttcattctttc-ttccaac 34439509  T
Q  119 tttaccctcc---------cca-----tcttttctc--acataattttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggta 201  Q
    |||||| ||          |||     |||||||||  ||| ||||| |||||||||||||  ||||||||||||||||||| ||| ||||| |||  ||    
T  34439508 tttaccttcaatatatactccaacttttcttttctcttacacaatttccaatgcaactttatgtttgtctttttcttataaaataaagggcaatttaata 34439409  T
Q  202 aaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    ||| ||||||||| |||||||||||||||  ||||||||||    
T  34439408 aaaatgttatatctaatgattatttcatttcatttcttaat 34439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 4124009 - 4123941
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4123941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 11785255 - 11785189
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaatttttt-cttccaactttaccctc 11785189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 17345290 - 17345146
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||||         | ||| ||||    ||||||| |    
T  17345290 ttgttttaaaatgaatatcactttacatttctaatacaactttaatatttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 17345191  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||||||||| || |||||||| ||||||||||||||||    
T  17345190 attttcaatgcaacttgaagtttgtcttgttcttataaagtaagg 17345146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 6143082 - 6143147
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  6143082 ttgttttaaaatgaatgtcattttacatttccaattcaactttaatttttttcttccaactttacc 6143147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 4132129 - 4132061
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4132061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 26189469 - 26189574
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||| |||||||||||| ||||||||        ||||||||||||||||||   |||||||||||||| |||||||||| |||| |||||||||||    
T  26189469 tccgtttcaaaatgagtgtcgctttaaccaaaaaaaattgtttcaaaatgaatgttgttttacatttccaatgcaactttaatatttttcttccaacttt 26189568  T
Q  122 accctc 127  Q
    ||||||    
T  26189569 accctc 26189574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 34576542 - 34576610
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  34576542 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttttcttccaactttatcctc 34576610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 6140598 - 6140662
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 124  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  6140598 ttgttttaaaatgaatgtcgctttacatttccaattcaactttaatttttt-cttccaactttacc 6140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 10494916 - 10494760
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccc---------tccccatcttttctcacat--aat 147  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||| |||            ||| |||||||| |||  |||    
T  10494916 ttgttttaaaatgaatgtcagtttacatttccaattcaactttaatttttttctttcaactttgcccaaaataaatagtccaacttttctctcatacaat 10494817  T
Q  148 tttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaa 203  Q
    |||||||||||||| || |||||| |||||||||||||||||||| ||||| |||||    
T  10494816 tttcaatgcaacttaaagtttgtcttttttcttataaagtaagggtagtttagtaaa 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 30627088 - 30627157
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||  |||||||||||||    
T  30627088 tttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttctctcaactttaccctc 30627157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 8052316 - 8052410
Alignment:
Q  32 aatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||||||||||||||||        |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || |||| |||||||||    
T  8052316 aatgagtgtcactttaacccaaaaacattgttttaaaatgaatgtcactttatatttctaatacaactttaatttttt-ctcccaattttaccctc 8052410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 3015919 - 3015964
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaatttttt 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaatttttt 3015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 30626867 - 30626918
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc 110  Q
    |||||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  30626867 ttgtttcaaaataaatattactttacattttcaatacaactttaattttttc 30626918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 34576633 - 34576684
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaa 188  Q
    ||||||| |||||||||||||||||||| |||||||| ||||| ||||||||    
T  34576633 tctcacacaattttcaatgcaactttaagtttgtcttgttcttgtaaagtaa 34576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 4132008 - 4131908
Alignment:
Q  139 tcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttct 238  Q
    ||||| |||||||||||||| || | ||||   ||||||||||||| ||| || ||||| |||||| ||||||||  ||||||||||| |||  ||||||    
T  4132008 tcacacaattttcaatgcaatttaagtttt---tttttcttataaaataaaggtagtttagtaaaaatgttatatataatgattatttaattttatttct 4131912  T
Q  239 taat 242  Q
    ||||    
T  4131911 taat 4131908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 19689989 - 19689927
Alignment:
Q  58 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 122  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||  | ||| ||||||||||||    
T  19689989 tttgttttaaaatgaatgttactttacatttctaatacaacttta--tattttcttccaacttta 19689927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 6992508 - 6992543
Alignment:
Q  155 gcaactttaattttgtctttttcttataaagtaagg 190  Q
    |||||||||| |||||||||||||||||||||||||    
T  6992508 gcaactttaagtttgtctttttcttataaagtaagg 6992543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 26189600 - 26189651
Alignment:
Q  140 cacataattttcaatgcaactttaattttg-tctttttcttataaagtaagg 190  Q
    |||| |||||||||||||||||||| |||| | |||||||||||||||||||    
T  26189600 cacacaattttcaatgcaactttaagtttgttttttttcttataaagtaagg 26189651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 19416857 - 19416887
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttc 89  Q
    |||||||||||||||||||||||||||||||    
T  19416857 ttgtttcaaaatgaatgtcactttacatttc 19416887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 19689858 - 19689809
Alignment:
Q  191 gcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 240  Q
    ||||||| |||||| ||||||||| ||| |||||||||||| ||||||||    
T  19689858 gcagtttagtaaaattgttatatctaataattatttcattccatttctta 19689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 25932718 - 25932771
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| ||||||||||| |||||||| |||||||| ||  ||||||||||||    
T  25932718 tctcacacaattttcaatgtaactttaagtttgtcttgttgctataaagtaagg 25932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 1546 - 1736
Alignment:
Q  64 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataattttca 152  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| ||||          ||| ||||||||  ||||||||||||    
T  1546 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 1645  T
Q  153 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||||||||  |||||||||||    
T  1646 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatc 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 70609 - 70465
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacata 145  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||         | ||| ||||    ||||||| |    
T  70609 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 70510  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||    
T  70509 attttcaatacaactttaagtttgtatttttcttataaagtaagg 70465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 1689 - 1767
Alignment:
Q  165 ttttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  |||||||||||    
T  1689 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatc 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 9428 - 9506
Alignment:
Q  165 ttttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  |||||||||||    
T  9428 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatc 9506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 1595 - 1691
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttcc--aatacaactttaatttttt 109  Q
    |||| ||||||||| |||||||||||||||||| ||        || |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  1595 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtcactttacatttccaaaatacaactttaatttttt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 9334 - 9430
Alignment:
Q  15 tacttcctccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttcc--aatacaactttaatttttt 109  Q
    |||| ||||||||| |||||||||||||||||| ||        || |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9334 tactccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtcactttacatttccaaaatacaactttaatttttt 9430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 242
Target Start/End: Complemental strand, 4263 - 4068
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acataat 147  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||||| ||||          ||| ||||||||  |||||||    
T  4263 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttttcttccaactttatcctcaataaatactccaacttttctctcacataat 4164  T
Q  148 tttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||  |||||||| |||||| ||||| ||||||||||||| || ||| |||||| |||||| |  ||||||| |||||||| ||||||||||    
T  4163 tttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatttcgtaaaaatgttatgtataatgattgtttcattccatttcttaat 4068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 16186 - 16000
Alignment:
Q  66 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc----------cccatcttt-tctcacataattttcaat 154  Q
    ||||| |||||| ||||| ||||  ||||||||||||||||||| |||| ||||||||||||          || | |||| ||||||| ||||||||||    
T  16186 aaaataaatgtctctttatatttttaatacaactttaatttttttcttcaaactttaccctcaataaatattccaacctttctctcacacaattttcaat 16087  T
Q  155 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 242  Q
    |||||||||| |||||| |||| ||||||||||| || ||||| |||||| ||||||||  ||||||||||||||| ||||| |||||    
T  16086 gcaactttaagtttgtcatttt-ttataaagtaaaggtagtttagtaaaaatgttatatataatgattatttcatttaattttttaat 16000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 13250 - 13145
Alignment:
Q  22 tccgttttaaaatgagtgtcactttaaccnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 121  Q
    ||||||| |||||||||||||||||||||        |||||| |||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||    
T  13250 tccgtttcaaaatgagtgtcactttaaccaaaaaaaattgttttaaaatgaacgtcactttacatttccaatacaattttaatttttttctcccaacttt 13151  T
Q  122 accctc 127  Q
    ||||||    
T  13150 accctc 13145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 13116 - 13081
Alignment:
Q  145 aattttcaatgcaactttaattttgtctttttctta 180  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13116 aattttcaatgtaactttaattttgtctttttctta 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 321724 - 321792
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 127  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctc 321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 321815 - 321868
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagg 190  Q
    ||||||| |||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  321815 tctcacacaattttcaatgcaattttaagtttgtcttgttcctataaagtaagg 321868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 8156 - 8342
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa--ttttttccttccaactttaccct---------ccccatcttt--tctcacata 145  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||  |||||| ||| |||||||| |||         | ||| ||||  ||||||| |    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttttctttcaactttaacctcaaaaaatactccaacttttctctcacaca 8255  T
Q  146 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 243  Q
    |||||||| ||||||||||||           |||||||| ||||||||||| |||||||  |||||||||||||||||||||||| |||| ||||||    
T  8256 attttcaaagcaactttaatt-----------ttataaagcaagggcagtttagtaaaagccttatatccaatgattatttcattccattttttaatc 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 158187 - 158229
Alignment:
Q  137 tctcacataattttcaatgcaactttaattttgtctttttctt 179  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  158187 tctcgcataattttcaatgcaactttaagtttgtctttttctt 158229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 7852 - 7791
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 122  Q
    |||||| |||||||||||||||||||||||  ||||||||||| | ||||| ||||||||||||    
T  7852 ttgttttaaaatgaatgtcactttacattt-taatacaacttttaattttt-cttccaacttta 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 31623 - 31667
Alignment:
Q  59 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 103  Q
    |||||| ||||||||||| ||||||||||||||||| || |||||    
T  31623 ttgttttaaaatgaatgttactttacatttccaataaaattttaa 31667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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