View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_low_283 (Length: 226)
Name: NF1498_low_283
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_low_283 |
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Alignment Details
Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 208
Target Start/End: Original strand, 41184132 - 41184327
Alignment:
| Q |
13 |
attatacttgcaatattttgaggtgaaacataatttgtgtttgtataagaaaatgattacttcctatgtttcatagccgctatatttataacnnnnnnnn |
112 |
Q |
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| T |
41184132 |
attatatttgcaattttttgaggtgaaacataatttgtgtttgtataagaaaatgatttcttcctatgtttcatagccgttatatttataacaaaaagaa |
41184231 |
T |
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| Q |
113 |
tctcaaaaataatgtcaattttaattttaaatggagttttaattgactatattttctacccgtatcatatatataataatatgattataatgaaat |
208 |
Q |
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| T |
41184232 |
tctcaaaaataatgtcaattttaattttaaatggagttttaattgactatattttctacccgtatcatatatgtaataatatgattataatgaaat |
41184327 |
T |
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