View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1498_low_297 (Length: 217)

Name: NF1498_low_297
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1498_low_297
NF1498_low_297
[»] chr7 (46 HSPs)
chr7 (1-217)||(18512518-18512734)
chr7 (147-217)||(33871975-33872045)
chr7 (149-217)||(46354195-46354264)
chr7 (147-217)||(19426954-19427025)
chr7 (147-217)||(10693138-10693207)
chr7 (147-217)||(11741794-11741863)
chr7 (147-217)||(21172074-21172143)
chr7 (147-217)||(42391165-42391234)
chr7 (145-217)||(2541084-2541157)
chr7 (149-217)||(47716460-47716529)
chr7 (147-217)||(11617653-11617724)
chr7 (147-217)||(12473303-12473374)
chr7 (147-217)||(6736889-6736959)
chr7 (147-217)||(19265814-19265884)
chr7 (147-209)||(32233208-32233270)
chr7 (149-217)||(7879639-7879708)
chr7 (147-216)||(31591175-31591243)
chr7 (149-217)||(42805525-42805594)
chr7 (152-217)||(8149010-8149077)
chr7 (158-217)||(2663000-2663058)
chr7 (147-217)||(27629633-27629704)
chr7 (147-217)||(29907418-29907489)
chr7 (147-217)||(43557471-43557542)
chr7 (147-217)||(48735187-48735257)
chr7 (147-217)||(32758260-32758329)
chr7 (149-205)||(18327035-18327091)
chr7 (147-205)||(7193084-7193143)
chr7 (147-217)||(7644955-7645026)
chr7 (147-217)||(16341277-16341348)
chr7 (147-202)||(42495916-42495971)
chr7 (148-217)||(23419739-23419809)
chr7 (147-217)||(34626273-34626343)
chr7 (167-217)||(38604546-38604596)
chr7 (147-217)||(47077920-47077989)
chr7 (149-217)||(42798670-42798739)
chr7 (152-216)||(15108463-15108527)
chr7 (147-214)||(35203438-35203506)
chr7 (149-217)||(40463878-40463946)
chr7 (147-217)||(19266449-19266520)
chr7 (159-214)||(22065599-22065654)
chr7 (147-217)||(48123549-48123620)
chr7 (147-217)||(13805101-13805171)
chr7 (147-217)||(18747485-18747557)
chr7 (149-217)||(38262261-38262330)
chr7 (148-217)||(42476873-42476941)
chr7 (152-216)||(43852047-43852111)
[»] chr4 (51 HSPs)
chr4 (147-217)||(19027847-19027918)
chr4 (147-217)||(41018859-41018929)
chr4 (149-217)||(5648260-5648328)
chr4 (147-217)||(6430691-6430761)
chr4 (147-217)||(9832378-9832447)
chr4 (149-217)||(40915830-40915898)
chr4 (147-217)||(5306729-5306799)
chr4 (147-217)||(20224983-20225052)
chr4 (147-217)||(30639379-30639449)
chr4 (147-217)||(48598890-48598959)
chr4 (147-207)||(42164224-42164284)
chr4 (147-217)||(17043459-17043530)
chr4 (147-217)||(47443956-47444027)
chr4 (147-217)||(54175062-54175133)
chr4 (147-217)||(11054213-11054282)
chr4 (148-217)||(16911562-16911632)
chr4 (149-214)||(21646965-21647031)
chr4 (147-217)||(47528595-47528664)
chr4 (149-217)||(16408668-16408737)
chr4 (147-217)||(487200-487271)
chr4 (147-214)||(39077864-39077930)
chr4 (160-217)||(9987899-9987957)
chr4 (147-217)||(29207963-29208032)
chr4 (147-192)||(25463121-25463166)
chr4 (147-214)||(37494850-37494918)
chr4 (148-217)||(54730249-54730320)
chr4 (147-217)||(7038052-7038122)
chr4 (147-206)||(17315375-17315434)
chr4 (150-205)||(32478863-32478918)
chr4 (147-217)||(10380008-10380078)
chr4 (147-212)||(44363202-44363268)
chr4 (172-217)||(12711514-12711561)
chr4 (148-217)||(30581531-30581602)
chr4 (147-206)||(43035247-43035307)
chr4 (147-217)||(7385541-7385612)
chr4 (159-217)||(10660415-10660474)
chr4 (159-217)||(10874560-10874619)
chr4 (157-215)||(17079718-17079777)
chr4 (155-216)||(23914394-23914452)
chr4 (147-202)||(49938671-49938726)
chr4 (147-217)||(30496387-30496456)
chr4 (160-217)||(51420586-51420644)
chr4 (180-217)||(7909346-7909383)
chr4 (152-217)||(10277822-10277886)
chr4 (149-217)||(14983835-14983904)
chr4 (165-217)||(20639724-20639777)
chr4 (147-192)||(30690274-30690319)
chr4 (147-192)||(54640430-54640475)
chr4 (147-216)||(14590836-14590907)
chr4 (150-217)||(25343189-25343257)
chr4 (147-191)||(41549381-41549425)
[»] chr2 (42 HSPs)
chr2 (147-217)||(12023984-12024054)
chr2 (149-217)||(17623565-17623634)
chr2 (149-217)||(17668003-17668072)
chr2 (149-217)||(8455381-8455450)
chr2 (149-217)||(14444730-14444798)
chr2 (147-217)||(10543697-10543768)
chr2 (147-217)||(24200690-24200761)
chr2 (147-214)||(17896258-17896327)
chr2 (147-217)||(23397765-23397834)
chr2 (147-217)||(25641501-25641571)
chr2 (147-217)||(5450284-5450356)
chr2 (147-217)||(10546161-10546233)
chr2 (145-217)||(9671178-9671249)
chr2 (32-88)||(14516960-14517015)
chr2 (150-217)||(22371059-22371124)
chr2 (149-217)||(25249803-25249871)
chr2 (147-217)||(14530317-14530388)
chr2 (147-217)||(23145763-23145834)
chr2 (147-217)||(23557553-23557624)
chr2 (147-217)||(17380302-17380372)
chr2 (147-217)||(21779326-21779395)
chr2 (147-212)||(33795284-33795350)
chr2 (149-216)||(5841029-5841097)
chr2 (149-201)||(44604855-44604907)
chr2 (147-217)||(7214533-7214604)
chr2 (147-217)||(19977779-19977850)
chr2 (147-217)||(32781353-32781424)
chr2 (147-217)||(29419950-29420025)
chr2 (163-217)||(30826052-30826106)
chr2 (149-217)||(11514437-11514506)
chr2 (149-217)||(17705496-17705565)
chr2 (164-217)||(36871509-36871562)
chr2 (149-217)||(40416936-40417005)
chr2 (147-214)||(19614991-19615059)
chr2 (149-217)||(25079782-25079852)
chr2 (147-214)||(26684688-26684758)
chr2 (163-214)||(30864485-30864536)
chr2 (149-217)||(39914370-39914440)
chr2 (147-217)||(99330-99399)
chr2 (147-217)||(27573620-27573690)
chr2 (147-216)||(2003602-2003673)
chr2 (149-217)||(24860053-24860120)
[»] chr1 (47 HSPs)
chr1 (147-217)||(32632622-32632692)
chr1 (147-217)||(25468328-25468399)
chr1 (147-217)||(11596535-11596605)
chr1 (147-217)||(34725163-34725232)
chr1 (149-217)||(30395793-30395862)
chr1 (149-217)||(46991828-46991897)
chr1 (147-211)||(31272446-31272510)
chr1 (147-217)||(2435852-2435923)
chr1 (147-217)||(18724610-18724681)
chr1 (147-217)||(35005145-35005216)
chr1 (147-217)||(38478347-38478416)
chr1 (149-217)||(6925124-6925193)
chr1 (150-217)||(50760291-50760359)
chr1 (147-217)||(10668247-10668318)
chr1 (147-217)||(18944665-18944736)
chr1 (147-217)||(27201669-27201740)
chr1 (147-217)||(35117833-35117904)
chr1 (147-217)||(12126902-12126971)
chr1 (147-217)||(35253252-35253321)
chr1 (147-217)||(45812602-45812671)
chr1 (149-217)||(4430091-4430160)
chr1 (149-217)||(20004157-20004226)
chr1 (149-217)||(23768385-23768454)
chr1 (157-217)||(22324925-22324985)
chr1 (147-210)||(22327121-22327185)
chr1 (147-217)||(14617060-14617131)
chr1 (151-217)||(17470411-17470478)
chr1 (147-217)||(41319871-41319942)
chr1 (147-217)||(44485174-44485245)
chr1 (147-217)||(46248018-46248089)
chr1 (147-217)||(19974140-19974210)
chr1 (147-217)||(27474303-27474373)
chr1 (147-217)||(33223006-33223076)
chr1 (147-217)||(47214533-47214602)
chr1 (147-192)||(2435984-2436029)
chr1 (147-217)||(9939483-9939554)
chr1 (147-190)||(20036242-20036285)
chr1 (147-202)||(22930148-22930203)
chr1 (166-217)||(31382279-31382330)
chr1 (147-217)||(35019252-35019323)
chr1 (147-214)||(49722641-49722708)
chr1 (147-217)||(19414461-19414530)
chr1 (180-217)||(21723739-21723776)
chr1 (180-217)||(21910714-21910751)
chr1 (149-198)||(45402118-45402167)
chr1 (147-217)||(50811961-50812033)
chr1 (159-214)||(39215027-39215083)
[»] chr8 (35 HSPs)
chr8 (147-216)||(31457172-31457241)
chr8 (147-217)||(18164825-18164895)
chr8 (149-217)||(13160703-13160771)
chr8 (149-217)||(45071266-45071334)
chr8 (147-217)||(35105922-35105993)
chr8 (147-217)||(12670315-12670384)
chr8 (149-217)||(7136594-7136663)
chr8 (149-217)||(28817691-28817760)
chr8 (149-217)||(36720797-36720866)
chr8 (149-217)||(44530150-44530219)
chr8 (149-217)||(26954133-26954203)
chr8 (147-217)||(39461061-39461132)
chr8 (147-217)||(44781571-44781642)
chr8 (147-217)||(20869563-20869632)
chr8 (149-217)||(6760823-6760892)
chr8 (149-217)||(8897829-8897898)
chr8 (149-217)||(29521750-29521819)
chr8 (147-217)||(389642-389715)
chr8 (147-217)||(20284136-20284209)
chr8 (147-217)||(22598156-22598227)
chr8 (152-217)||(8484003-8484069)
chr8 (149-203)||(28407417-28407471)
chr8 (147-217)||(30454162-30454231)
chr8 (147-217)||(2626518-2626592)
chr8 (147-217)||(21070764-21070838)
chr8 (154-217)||(5135354-5135418)
chr8 (147-217)||(17823575-17823646)
chr8 (150-217)||(12625891-12625960)
chr8 (149-217)||(25250523-25250592)
chr8 (149-217)||(35261680-35261749)
chr8 (147-211)||(42083770-42083835)
chr8 (147-208)||(30962847-30962909)
chr8 (157-217)||(5689640-5689701)
chr8 (149-217)||(44742584-44742653)
chr8 (152-217)||(24365124-24365191)
[»] chr5 (30 HSPs)
chr5 (149-217)||(41014320-41014388)
chr5 (147-217)||(42924899-42924970)
chr5 (147-217)||(32703423-32703492)
chr5 (147-217)||(35710312-35710381)
chr5 (149-217)||(24448891-24448960)
chr5 (158-217)||(19143008-19143067)
chr5 (147-217)||(38879580-38879651)
chr5 (147-217)||(8170049-8170118)
chr5 (149-217)||(4619171-4619240)
chr5 (147-212)||(37024626-37024690)
chr5 (147-217)||(43334201-43334273)
chr5 (149-207)||(23974781-23974840)
chr5 (147-217)||(27328751-27328822)
chr5 (148-217)||(208993-209062)
chr5 (147-216)||(1850639-1850708)
chr5 (172-217)||(2838803-2838848)
chr5 (149-217)||(22600455-22600524)
chr5 (151-214)||(43574609-43574673)
chr5 (147-216)||(28516500-28516570)
chr5 (152-217)||(41425952-41426018)
chr5 (149-217)||(1405188-1405257)
chr5 (157-217)||(13801834-13801895)
chr5 (170-217)||(7097825-7097872)
chr5 (147-205)||(22025542-22025601)
chr5 (147-209)||(39301122-39301185)
chr5 (163-217)||(7368413-7368466)
chr5 (147-217)||(22907930-22908000)
chr5 (147-192)||(1565430-1565475)
chr5 (148-176)||(9794466-9794494)
chr5 (147-217)||(12006395-12006466)
[»] chr6 (21 HSPs)
chr6 (147-217)||(29355922-29355993)
chr6 (147-216)||(9161122-9161191)
chr6 (147-217)||(2166477-2166548)
chr6 (147-217)||(2178110-2178181)
chr6 (147-217)||(12221982-12222053)
chr6 (147-217)||(1346963-1347032)
chr6 (147-217)||(1354822-1354891)
chr6 (147-212)||(17448323-17448389)
chr6 (147-217)||(7947437-7947508)
chr6 (147-213)||(13905048-13905115)
chr6 (152-209)||(4136590-4136648)
chr6 (147-215)||(8409242-8409311)
chr6 (147-192)||(17432339-17432384)
chr6 (148-217)||(28007628-28007696)
chr6 (149-212)||(22967172-22967235)
chr6 (149-212)||(23821158-23821221)
chr6 (148-217)||(14553511-14553581)
chr6 (149-217)||(1941856-1941925)
chr6 (153-217)||(33138838-33138903)
chr6 (158-215)||(32579436-32579493)
chr6 (148-211)||(18277264-18277328)
[»] chr3 (42 HSPs)
chr3 (147-217)||(13628857-13628928)
chr3 (147-217)||(1217111-1217180)
chr3 (147-209)||(10870025-10870087)
chr3 (147-217)||(26869728-26869798)
chr3 (148-217)||(46421102-46421172)
chr3 (149-217)||(40272877-40272946)
chr3 (149-217)||(45948903-45948972)
chr3 (149-217)||(54032624-54032693)
chr3 (149-217)||(22609789-22609857)
chr3 (150-217)||(6411887-6411954)
chr3 (147-217)||(8247754-8247825)
chr3 (147-217)||(26573148-26573219)
chr3 (147-217)||(34420709-34420780)
chr3 (147-213)||(54374415-54374482)
chr3 (148-217)||(29366787-29366857)
chr3 (147-217)||(33926104-33926174)
chr3 (149-217)||(4495729-4495798)
chr3 (148-217)||(7696952-7697020)
chr3 (149-217)||(13730669-13730738)
chr3 (147-217)||(45620893-45620965)
chr3 (147-214)||(516430-516498)
chr3 (154-217)||(10795490-10795554)
chr3 (147-217)||(45139543-45139614)
chr3 (147-217)||(53996631-53996702)
chr3 (147-217)||(5173786-5173856)
chr3 (147-217)||(22122982-22123051)
chr3 (155-217)||(31592878-31592939)
chr3 (152-217)||(16735467-16735532)
chr3 (149-216)||(7943013-7943081)
chr3 (158-217)||(14986989-14987049)
chr3 (147-217)||(1121290-1121361)
chr3 (147-217)||(12914100-12914171)
chr3 (148-217)||(29106571-29106641)
chr3 (147-217)||(39203537-39203606)
chr3 (147-216)||(39212011-39212081)
chr3 (171-217)||(47624087-47624133)
chr3 (147-207)||(12525428-12525489)
chr3 (155-217)||(21875042-21875106)
chr3 (147-192)||(30928238-30928283)
chr3 (147-217)||(52428542-52428614)
chr3 (147-217)||(9607224-9607295)
chr3 (147-217)||(19751599-19751670)
[»] scaffold0057 (1 HSPs)
scaffold0057 (149-217)||(46832-46901)
[»] scaffold0254 (1 HSPs)
scaffold0254 (147-217)||(4156-4227)
[»] scaffold1176 (1 HSPs)
scaffold1176 (147-217)||(1652-1721)
[»] scaffold0258 (2 HSPs)
scaffold0258 (147-217)||(13089-13159)
scaffold0258 (153-192)||(16733-16772)
[»] scaffold0049 (1 HSPs)
scaffold0049 (147-217)||(58976-59047)
[»] scaffold0036 (1 HSPs)
scaffold0036 (149-217)||(35082-35152)
[»] scaffold0187 (2 HSPs)
scaffold0187 (147-217)||(10115-10184)
scaffold0187 (147-217)||(20443-20512)
[»] scaffold0168 (1 HSPs)
scaffold0168 (147-217)||(30578-30647)
[»] scaffold0311 (1 HSPs)
scaffold0311 (149-217)||(10811-10880)
[»] scaffold0223 (1 HSPs)
scaffold0223 (147-217)||(11130-11199)
[»] scaffold0167 (1 HSPs)
scaffold0167 (155-213)||(23606-23665)
[»] scaffold0015 (1 HSPs)
scaffold0015 (157-217)||(48699-48758)
[»] scaffold0005 (1 HSPs)
scaffold0005 (147-216)||(226471-226542)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 18512734 - 18512518
Alignment:
Q  1 agcagcacagaatagtatgatttaagaagtgtagtcattgccaaatgaaaaggcaaaaccaacctagtttgcaaaggatgcaacctgtcgnnnnnnngag 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||    
T  18512734 agcagctcagaatagtatgatttaagaagtgtagtcattgccaaatgaaaaggcaacaccaacctagtttgcaaaggatgcaacctgtcgaaaaaaagag 18512635  T
Q  101 aaagactgctgaatcatttcatgattatagattgcgatgatagttggaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaa 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18512634 aaagactgctgaatcatttcgtgattatagattgcgatgatagttggaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggtaa 18512535  T
Q  201 ggctgcgtacaatacac 217  Q
    |||||||||||||||||    
T  18512534 ggctgcgtacaatacac 18512518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 33872045 - 33871975
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  33872045 gaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggataaggctgcgtacaatacac 33871975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 46354195 - 46354264
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  46354195 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 46354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19427025 - 19426954
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||| |||||||||||||||    
T  19427025 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaatacac 19426954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 10693207 - 10693138
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  10693207 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaagagggtaaggctgcgtacaatacac 10693138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 11741794 - 11741863
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||    
T  11741794 gaaaggtcatgggttcaagtcctgaaaacagcttctagtgt-aaaatagggtaaggctgcgtacaatacac 11741863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 21172143 - 21172074
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  21172143 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 21172074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 42391234 - 42391165
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  42391234 gaaaggtcacgggttcaagtcctggaaacagcttcttgtgt-aaaacagggtaaggctgcgtacaatacac 42391165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 2541157 - 2541084
Alignment:
Q  145 tggaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||| ||||||    
T  2541157 tggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactatacac 2541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 47716460 - 47716529
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||    
T  47716460 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 47716529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 11617724 - 11617653
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| |||| |||||||| |||||||||||||||    
T  11617724 gaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacac 11617653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 12473303 - 12473374
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||||||| ||||||||||||||    
T  12473303 gaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaaggatgcgtacaatacac 12473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 6736889 - 6736959
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||| | |||||| |||| ||||||||||    
T  6736889 gaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaacaaggtaagactgcatacaatacac 6736959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 19265814 - 19265884
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| || | ||| |  |||||||||||| ||||||||||||||||||||||||    
T  19265814 gaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggtaaggctgcgtacaatacac 19265884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 32233270 - 32233208
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgta 209  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||| |||||    
T  32233270 gaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggcagcgta 32233208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 7879639 - 7879708
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||||  |||||||| ||||| | ||||||||||||||||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacac 7879708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 31591243 - 31591175
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaataca 216  Q
    ||||||||||| |||||||||||| ||||||| |||||||| |||| || ||||||||||||||||||||    
T  31591243 gaaaggtcacgagttcaagtcctggaaacaacctcttgtgt-aaaacagagtaaggctgcgtacaataca 31591175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 42805525 - 42805594
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||| |||||||||||    
T  42805525 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacac 42805594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 8149077 - 8149010
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||| ||||||||||||||||| || ||||||||  ||||||||||||||| ||||||||||||||    
T  8149077 gtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacac 8149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 2663058 - 2663000
Alignment:
Q  158 ggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||||    
T  2663058 ggttcaagtcctggaaacagcctcttgtgtaaaa-tagggtaaggctgcgtacaatacac 2663000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27629633 - 27629704
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| ||||| ||||||||| |||||| |||||||    
T  27629633 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacac 27629704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 29907418 - 29907489
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||  ||||| | |||||||| |||||||| |||||||||||| ||||||||    
T  29907418 gaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacac 29907489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 43557471 - 43557542
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||| | |||||||| ||||| || |||||||||||||||||||||    
T  43557471 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacac 43557542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 48735257 - 48735187
Alignment:
Q  147 gaaaggtcacgggttcaagtcc-tgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| || ||||||| |||||||| |||| | ||||||||||||||||||||||    
T  48735257 gaaaggtcacgggttcaagtccttggaaacaacctcttgtgt-aaaacacggtaaggctgcgtacaatacac 48735187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 32758260 - 32758329
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | |||||||| |||| |||||||||||| |||||||||||    
T  32758260 gaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgtgtacaatacac 32758329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 18327035 - 18327091
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctg 205  Q
    |||||||||||||||||||| | ||||| | ||||||||||||| ||||||||||||    
T  18327035 aaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggtaaggctg 18327091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 7193084 - 7193143
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaa-aatagggtaaggctg 205  Q
    |||||||||||||||||||||||  ||||||| ||||||||||| |||| ||||||||||    
T  7193084 gaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaaggctg 7193143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7644955 - 7645026
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| ||||| ||||||||   |||||||||||||    
T  7644955 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacac 7645026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 16341277 - 16341348
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||| ||  ||||| | |||||||| ||||| ||||||||||| ||||||||||||    
T  16341277 gaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaatacac 16341348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 42495971 - 42495916
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaagg 202  Q
    |||||||||||||||||||||||| ||||| | |||||| |||||| |||||||||    
T  42495971 gaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacagggtaagg 42495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 23419809 - 23419739
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| ||||||||| ||| ||||| | ||||||||| |||| |||||||| |||||||||||||||    
T  23419809 aaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 23419739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34626343 - 34626273
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||| ||| | ||||||||||| ||||| | || |||||||||| ||||||||||||||| ||||||||    
T  34626343 gaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggtaaggctgcgttcaatacac 34626273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 38604546 - 38604596
Alignment:
Q  167 cctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||| ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  38604546 cctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 38604596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 47077989 - 47077920
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| |||||   |||||||| ||||||| |||| | ||||||||||||||    
T  47077989 gaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaatagagtaaagttgcgtacaatacac 47077920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 42798670 - 42798739
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| || |||||   |||||||| ||||| | ||||||||||||||||||||||    
T  42798670 aaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatacac 42798739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 15108527 - 15108463
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaataca 216  Q
    |||||| |||||||||||| |||||   ||||||||||||| | |||||||||| ||||||||||    
T  15108527 gtcacgagttcaagtcctggaaacagtttcttgtgtaaaaacaaggtaaggctgtgtacaataca 15108463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 35203438 - 35203506
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaata 214  Q
    |||||||||||||||||||||||| |||||   |||||||| ||||| ||| |||| ||||||||||||    
T  35203438 gaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaata 35203506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 40463878 - 40463946
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| |  |||||   |||||||||||||  ||||||||||||||| |||||||    
T  40463878 aaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggtaaggctgcgtataatacac 40463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 19266449 - 19266520
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||||  |||||||||||||||||| | |  |||| |||||||  ||||||||||||||||||||||||    
T  19266449 gaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacac 19266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 22065599 - 22065654
Alignment:
Q  159 gttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaata 214  Q
    ||||||||  || ||||||| ||||||||||||||||||||| ||||| |||||||    
T  22065599 gttcaagttttggaaacaacctcttgtgtaaaaatagggtaaagctgcatacaata 22065654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 48123620 - 48123549
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaa-aatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||| | ||||||||||| || |||||||  |||| ||||||||||    
T  48123620 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacac 48123549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 13805101 - 13805171
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||| |||||||||||||||| ||| | | ||| ||||||||   ||||||||||| |||||||||||    
T  13805101 gaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaacaggggtaaggctgtgtacaatacac 13805171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 18747485 - 18747557
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa--tagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||||| || ||||| | | |||||||||||   |||||||||||||||| |||||||    
T  18747485 gaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacac 18747557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 38262330 - 38262261
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| |||||   ||||||||| |||||| ||||| | ||| ||||||||||    
T  38262330 aaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacac 38262261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 42476873 - 42476941
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| ||||||| ||| |||||   ||||||||||||  ||| ||||||||||||||||||||    
T  42476873 aaaggtcacggattcaagttctggaaacagtctcttgtgtaaaacaagg-taaggctgcgtacaatacac 42476941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 43852047 - 43852111
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaataca 216  Q
    ||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||  ||||||||||    
T  43852047 gtcacgggttcaagtcctgaaaa-aacctcttctgtaaaaaacagggtaaggctatgtacaataca 43852111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 19027847 - 19027918
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  19027847 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacac 19027918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 41018929 - 41018859
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| ||||||||||||    
T  41018929 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaatacac 41018859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 5648260 - 5648328
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  5648260 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 5648328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 6430761 - 6430691
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  6430761 gaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 6430691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 9832447 - 9832378
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||    
T  9832447 gaaaggtcacgggttcaagtcctgaaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 9832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 40915830 - 40915898
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| | ||||||||||||||||||||||    
T  40915830 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacaaggtaaggctgcgtacaatacac 40915898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 5306799 - 5306729
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||  ||||||||| ||||||||||||||    
T  5306799 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggtaaggttgcgtacaatacac 5306729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 20224983 - 20225052
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  20224983 gaaaggtcatgggttcaagtcctggaaacaacctcttgtgt-aaaacagggtaaggctgcgtacaatacac 20225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 30639379 - 30639449
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| |||||   ||||||||||||| ||||||||||||||||||||||||    
T  30639379 gaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggtaaggctgcgtacaatacac 30639449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 48598959 - 48598890
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  48598959 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 48598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 42164284 - 42164224
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcg 207  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||| ||||||||||||||    
T  42164284 gaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggtaaggctgcg 42164224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 17043530 - 17043459
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | |||||||||||| | ||||||||||||||||||||||||    
T  17043530 gaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacac 17043459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 47443956 - 47444027
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||| || ||||| ||||||||||||||||||||||||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacac 47444027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 54175062 - 54175133
Alignment:
Q  147 gaaaggtcacgggttcaagtcctg-aaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||| ||||||| ||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  54175062 gaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 54175133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 11054282 - 11054213
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||||||||||   |||||||| |||| |||||||| |||||||||||||||    
T  11054282 gaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt-aaaacagggtaagactgcgtacaatacac 11054213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 16911562 - 16911632
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||  ||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  16911562 aaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatacac 16911632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 21646965 - 21647031
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaata 214  Q
    |||||||| ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||    
T  21646965 aaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgtacaata 21647031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 47528664 - 47528595
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  47528664 gaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 47528595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 16408737 - 16408668
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||| |||| |||||||| |||||||||||||||    
T  16408737 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 16408668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 487271 - 487200
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| || ||||||| ||||||||| |||| | ||||| ||||||||||||||||    
T  487271 gaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgtacaatacac 487200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 39077930 - 39077864
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaata 214  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||| |||||||||||    
T  39077930 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggttgcgtacaata 39077864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 9987957 - 9987899
Alignment:
Q  160 ttcaagtcctgaaaacaacatcttgtgtaaa-aatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacac 9987899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 29208032 - 29207963
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| |||   | ||||||||||||  ||||||||||||||||||||||||    
T  29208032 gaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaac-agggtaaggctgcgtacaatacac 29207963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 25463121 - 25463166
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||    
T  25463121 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 25463166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 37494850 - 37494918
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaata 214  Q
    |||||||||| ||||||||||||| ||||||| |||||||| ||||| ||||||||| ||| |||||||    
T  37494850 gaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaata 37494918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 54730249 - 54730320
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||  ||||| | ||||||||  ||||||||| |||||||||||| |||||||    
T  54730249 aaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgtataatacac 54730320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7038052 - 7038122
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | |||||||| |||||||||||||| || ||||||||||||    
T  7038052 gaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacac 7038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 17315434 - 17315375
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgc 206  Q
    |||||||||||||||||| ||||  ||||||| ||||||||||||| | |||||||||||    
T  17315434 gaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaacaaggtaaggctgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 32478918 - 32478863
Alignment:
Q  150 aggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctg 205  Q
    ||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  32478918 aggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggtaaggctg 32478863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 10380078 - 10380008
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||  |||||||||||  ||||||| ||||||||||||||||| |||   ||||||||||||||    
T  10380078 gaaaggtcacttgttcaagtcctacaaacaacctcttgtgtaaaaataggataaaattgcgtacaatacac 10380008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 44363268 - 44363202
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaa 212  Q
    ||||||||||| |||||||||||||||||| | || ||||| ||||| |||||| ||||||||||||    
T  44363268 gaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaa 44363202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 12711561 - 12711514
Alignment:
Q  172 aaacaacatcttgtgtaaaaa--tagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||    
T  12711561 aaacaacatcttgtgtaaaaaaatagggtaagactgcgtacaatacac 12711514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 30581602 - 30581531
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgta--aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||| ||||||||||| || ||||||| |||||||||  |||| ||||||||| || |||||||||||    
T  30581602 aaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacac 30581531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 43035247 - 43035307
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaa-aaatagggtaaggctgc 206  Q
    |||||||||||||||||||||| | ||||||| |||||||||| ||| | |||||||||||    
T  43035247 gaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 7385612 - 7385541
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| |||| ||||| | || ||||| ||||||||||||||| || || ||||||||    
T  7385612 gaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacac 7385541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 10660415 - 10660474
Alignment:
Q  159 gttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||| ||||||| |||| ||| |||||||||||| |||||| ||||||||||    
T  10660415 gttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacac 10660474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 10874560 - 10874619
Alignment:
Q  159 gttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||| ||||||| |||| ||| |||||||||||| |||||| ||||||||||    
T  10874560 gttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcatacaatacac 10874619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 17079777 - 17079718
Alignment:
Q  157 gggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatac 215  Q
    ||||||||||| || |||||| |||||||||| |||| ||||||||||||| ||||||||    
T  17079777 gggttcaagtcttggaaacaatatcttgtgtataaaacagggtaaggctgcatacaatac 17079718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 23914452 - 23914394
Alignment:
Q  155 acgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaataca 216  Q
    |||| ||||||||||||||||    |||||||||||||||||||||| |||| |||||||||    
T  23914452 acggattcaagtcctgaaaacg---tcttgtgtaaaaatagggtaagactgcatacaataca 23914394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 49938726 - 49938671
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaagg 202  Q
    |||||||||| ||||||||||||| ||||| | |||||||||||||  ||||||||    
T  49938726 gaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaagg 49938671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 30496456 - 30496387
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| ||||||||| || ||||| | ||||||||||| |  |||||||||||| ||||||||||    
T  30496456 gaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaaca-cgggtaaggctgcatacaatacac 30496387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 51420586 - 51420644
Alignment:
Q  160 ttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||| || ||||||| ||||||||| |||| |||||||||||| |||||||||||    
T  51420586 ttcaagtcatggaaacaacctcttgtgtagaaaacagggtaaggctgggtacaatacac 51420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 7909383 - 7909346
Alignment:
Q  180 tcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  7909383 tcttgtgtaaaaacagggtaaggttgcgtacaatacac 7909346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 10277886 - 10277822
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||  ||||| | |||||| ||||| |||| ||||||||||||||||||||    
T  10277886 gtcacgggttcaaatccttgaaacagcctcttgtataaaa-taggataaggctgcgtacaatacac 10277822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 14983835 - 14983904
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||| |||||||| |  ||||| | |||||||||||| ||||||||||| ||| ||||||||||    
T  14983835 aaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggttgcctacaatacac 14983904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 20639777 - 20639724
Alignment:
Q  165 gtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||| ||||| | |||||||||||||  ||||||||||||||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 20639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 30690319 - 30690274
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||||||||||||||||||| ||| | | |||||||||||||    
T  30690319 gaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaa 30690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 54640475 - 54640430
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    ||||||||||||||||||||| || ||||| | |||||||||||||    
T  54640475 gaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 54640430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 14590836 - 14590907
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||||| ||||||||||  ||||| | |||||| |  ||||| ||||||||||||| |||||||||    
T  14590836 gaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaataca 14590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 25343189 - 25343257
Alignment:
Q  150 aggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||| ||||||||| ||| ||| |   |||||||||||||  ||||||||||||||||||||||||    
T  25343189 aggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 25343257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 41549381 - 41549425
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa 191  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||||||    
T  41549381 gaaatgtcacgggttcaagttctggaaacaacctcttgtgtaaaa 41549425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 9e-23; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12024054 - 12023984
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  12024054 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 12023984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 17623565 - 17623634
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17623565 aaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17623634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 17668003 - 17668072
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  17668003 aaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17668072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 8455450 - 8455381
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | |||||||||||| | ||||||||||||||||||||||||    
T  8455450 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatacac 8455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 14444730 - 14444798
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||| |||| ||||||    
T  14444730 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgtgtacgatacac 14444798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 10543697 - 10543768
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||  | |||||||| ||||| ||||||||||||||||||||||||    
T  10543697 gaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 10543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 24200761 - 24200690
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||| ||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  24200761 gaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 24200690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 17896258 - 17896327
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaata 214  Q
    |||||||||||| ||||||||||  ||||||| ||||||||  |||||||||||||||||||||||||||    
T  17896258 gaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaata 17896327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 23397765 - 23397834
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||| | |||||||| |||||||||||||||| ||||||||||||    
T  23397765 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgt-aaaatagggtaaggctacgtacaatacac 23397834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 25641501 - 25641571
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| ||| |||||| |||| ||||||| | ||||||||||||||    
T  25641501 gaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggtaaagttgcgtacaatacac 25641571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 5450284 - 5450356
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||| ||||| ||||||| ||||||||  ||||| | ||||||||||||||||||||||    
T  5450284 gaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacac 5450356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 10546161 - 10546233
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||| |  ||||| ||||||||||||||||||||||||    
T  10546161 gaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacac 10546233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 9671178 - 9671249
Alignment:
Q  145 tggaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||| ||||||||||||| ||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  9671178 tggaaatgtcacgggttcaaatcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 9671249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 14516960 - 14517015
Alignment:
Q  32 tagtcattgccaaatgaaaaggcaaaaccaacctagtttgcaaaggatgcaacctgt 88  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  14516960 tagtcattgcaaaatgaaaaggcaaa-ccaacctagtttccaaaggatgcaacctgt 14517015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 22371059 - 22371124
Alignment:
Q  150 aggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| ||||| | ||  ||||||||| ||||||||||||||||||||||||    
T  22371059 aggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacagggtaaggctgcgtacaatacac 22371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 25249871 - 25249803
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| || |||||   ||||||||| ||| ||||||||||||||||||||||||    
T  25249871 aaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggtaaggctgcgtacaatacac 25249803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 14530317 - 14530388
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||| | ||||| ||||||||||| ||||||||||||    
T  14530317 gaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaatacac 14530388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 23145834 - 23145763
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| ||||||||   ||||||||| |||| || |||||||||||||||||||||    
T  23145834 gaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacac 23145763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 23557624 - 23557553
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| ||||||||   ||||||||| |||| || |||||||||||||||||||||    
T  23557624 gaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacac 23557553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 17380372 - 17380302
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| || ||||||| ||||||||| ||| ||||||||| || || ||||||||    
T  17380372 gaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggtaaggttgtgtgcaatacac 17380302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 21779395 - 21779326
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| | ||| | |||||||| |||| ||||||||| ||||||||||||||    
T  21779395 gaaaggtcacgggttcaagtcctggagacagcctcttgtgt-aaaacagggtaaggttgcgtacaatacac 21779326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 33795284 - 33795350
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaa 212  Q
    |||||||||||||||||||||| | ||||||| ||||| || ||||| |||||||||||||||||||    
T  33795284 gaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaa 33795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 5841029 - 5841097
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaataca 216  Q
    |||||||||||||||||||||  ||||| | | |||||||||| ||||||||||| |||||||||||||    
T  5841029 aaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaataca 5841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 44604855 - 44604907
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaag 201  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||    
T  44604855 aaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaag 44604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7214533 - 7214604
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||||||| ||||||||||| || |||||   |||||||||||| | ||||||||||||||||||||||||    
T  7214533 gaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacac 7214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19977850 - 19977779
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||| ||| ||||| | |||| ||| ||||||||| ||||| ||||||||||||||    
T  19977850 gaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacac 19977779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 32781424 - 32781353
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| |||||||||  | ||||||| ||||||||| |||| |||||||| |||||||||||||||    
T  32781424 gaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacac 32781353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 29420025 - 29419950
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagg----gtaaggctgcgtacaatacac 217  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| |||| |||    |||||||||||||||||||||    
T  29420025 gaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacac 29419950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 30826052 - 30826106
Alignment:
Q  163 aagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| || ||||| | ||||||||||||||||||||||| ||||||||||||||    
T  30826052 aagtcttggaaacagcctcttgtgtaaaaatagggtaaggttgcgtacaatacac 30826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 11514437 - 11514506
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||| ||||| ||||| | |||||||| ||||| |  |||||||||||||||||||||    
T  11514437 aaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatacac 11514506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 17705496 - 17705565
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaa-aatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||  | ||||||||||| || || ||||||||| |||||||||||    
T  17705496 aaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctgtgtacaatacac 17705565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 36871509 - 36871562
Alignment:
Q  164 agtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggtaaggctgcgtacaatacac 36871562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 40417005 - 40416936
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| || ||||||| |||||| | ||||| |||| ||||||| |||||||||||    
T  40417005 aaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacac 40416936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 19614991 - 19615059
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaata 214  Q
    |||||||||||||||||||||||  ||||| | |||||| | ||||| |||||||| ||||||||||||    
T  19614991 gaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaata 19615059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 25079852 - 25079782
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta--aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| |  ||||||| |||||||||  |||| | ||||||| ||||||||||||||    
T  25079852 aaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacac 25079782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 26684758 - 26684688
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaaca-acatcttgtgtaaaaa--tagggtaaggctgcgtacaata 214  Q
    |||||||||  |||| |||||||||||||| || |||||||||||||  || |||||||||||||||||||    
T  26684758 gaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggtaaggctgcgtacaata 26684688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 30864536 - 30864485
Alignment:
Q  163 aagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaata 214  Q
    ||||| || ||||| | ||||||||||||||||||||||| |||||||||||    
T  30864536 aagtcatggaaacagcctcttgtgtaaaaatagggtaagggtgcgtacaata 30864485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 39914440 - 39914370
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta--aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| |||||| ||| ||||||| |||||||||  |||| ||||||||| || |||||||||||    
T  39914440 aaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacac 39914370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 99399 - 99330
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||  ||||| | ||||||  ||||| | || |||||||||||||||||||    
T  99399 gaaaggtcacgggttcaagtcctagaaacagcctcttgt-aaaaaacatggcaaggctgcgtacaatacac 99330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27573620 - 27573690
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||  ||||||||||| |  |||| | ||||||||| ||| | ||||||||||||||||||||||    
T  27573620 gaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggtaaggctgcgtacaatacac 27573690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 2003673 - 2003602
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||||||| ||||||||| ||||| |  |||| ||  ||||| ||||||||| |||||||||||||    
T  2003673 gaaaggtcacgggtacaagtcctggaaacagccccttgcgtaaaaaaacagggtaaggatgcgtacaataca 2003602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 24860120 - 24860053
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| ||||||| ||| |||| ||||||| ||| ||||||||| | |||| |||||||||||||||||    
T  24860120 aaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggta-ggctgcgtacaatacac 24860053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 32632692 - 32632622
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  32632692 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 32632622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 25468399 - 25468328
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  25468399 gaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacac 25468328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 11596535 - 11596605
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||| ||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||| |||||||    
T  11596535 gaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggtaaggctgcgtataatacac 11596605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34725232 - 34725163
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  34725232 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 34725163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 30395862 - 30395793
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  30395862 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 30395793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 46991828 - 46991897
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||| |||||||||||    
T  46991828 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacac 46991897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 31272510 - 31272446
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtaca 211  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||    
T  31272510 gaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacatggtaaggctgcgtaca 31272446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 2435923 - 2435852
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | || ||||| |||||||||||||| |||||||||||||||    
T  2435923 gaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgtacaatacac 2435852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 18724681 - 18724610
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||| |||| |||||||||||| |||||||||||    
T  18724681 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacac 18724610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 35005145 - 35005216
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| |||||||| | |||||||| ||||| ||||||||||||| ||||||||||    
T  35005145 gaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacac 35005216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 38478416 - 38478347
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||  ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  38478416 gaaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 38478347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 6925124 - 6925193
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||| | | |||||||| |||||||||||||||||||| |||||||||    
T  6925124 aaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacac 6925193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 50760359 - 50760291
Alignment:
Q  150 aggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||  ||||||||||||||| |||||||    
T  50760359 aggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgtataatacac 50760291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 10668247 - 10668318
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| ||||| | ||||||| ||||||||||||||    
T  10668247 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacac 10668318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 18944665 - 18944736
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| |||||||| |||| ||||| | |||||||| ||||| ||||||||||||||||||||||||    
T  18944665 gaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 18944736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27201669 - 27201740
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||||| | |||||||| | ||| ||||||||||||||||||||||||    
T  27201669 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacac 27201740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 35117904 - 35117833
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||| | | |||||||||||| | |||||||||||| |||||||||||    
T  35117904 gaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacac 35117833  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12126971 - 12126902
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||| |||| ||| ||||| | ||||||||||||  ||||||||||||||||||||||||    
T  12126971 gaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaac-agggtaaggctgcgtacaatacac 12126902  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 35253321 - 35253252
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| |||||||||||||||||  ||||| | ||||||||||||  ||||||||||||||||||||||||    
T  35253321 gaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaac-agggtaaggctgcgtacaatacac 35253252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 45812671 - 45812602
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| |||||||||||||||||||   |||||||| |||| ||||||||||||| ||||||||||    
T  45812671 gaaaggtcacaggttcaagtcctgaaaacagtctcttgtgt-aaaagagggtaaggctgcatacaatacac 45812602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 4430160 - 4430091
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||| ||||||||  |||||||||| |||| |||||||| |||||||||||||||    
T  4430160 aaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacac 4430091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 20004226 - 20004157
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||| |||| ||||| | ||||||||||||||||||||||    
T  20004226 aaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacac 20004157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 23768454 - 23768385
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||| |||||||||| || ||||| | |||||||||||||  ||||||||||||||||||||||||    
T  23768454 aaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 23768385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 22324925 - 22324985
Alignment:
Q  157 gggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| || ||||| | ||||||||||||| ||||||||||||| ||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcatacaatacac 22324985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 22327121 - 22327185
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtac 210  Q
    |||||||| ||||||||||||||| ||||||| |||||||| ||||| |||||||||||| ||||    
T  22327121 gaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtac 22327185  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 14617060 - 14617131
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaa-aatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| |||||||||||| ||||| | ||||||||||| || | ||||||| ||||||||||||||    
T  14617060 gaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgtacaatacac 14617131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 17470478 - 17470411
Alignment:
Q  151 ggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||| |||||||||||||  ||||| | |||||||||||||  ||||||||||||||||||||||||    
T  17470478 ggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 17470411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 41319942 - 41319871
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||| |||| |||||||| |||||   |||||||||||||  ||||||||||||||||||||||||    
T  41319942 gaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 41319871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 44485245 - 44485174
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||  ||||||| |||||||  ||||||||||| | | ||||||||||||||||||||||    
T  44485245 gaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggctgcgtacaatacac 44485174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 46248089 - 46248018
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||| |||||||||||||||| || ||||| | ||||||||| |||| |||||||| |||||||||||||||    
T  46248089 gaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacac 46248018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19974210 - 19974140
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| ||||||||||||||| || ||||| | ||  |||||||||||||| |||| ||||||||||||||    
T  19974210 gaaagatcacgggttcaagtcttggaaacagcctcaagtgtaaaaatagggcaaggttgcgtacaatacac 19974140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27474303 - 27474373
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| |||||||||| || |||||   ||||||||||||| |||| || ||||||||||||||||    
T  27474303 gaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacagggcaaagctgcgtacaatacac 27474373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 33223006 - 33223076
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||| || ||||| || ||||| | ||||||||||||| |||| |||| ||||||||||||||    
T  33223006 gaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacagggaaaggttgcgtacaatacac 33223076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 47214533 - 47214602
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| |||||   |||||| | |||| ||||||||| ||||||||||||||    
T  47214533 gaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggtaaggttgcgtacaatacac 47214602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 2436029 - 2435984
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||    
T  2436029 gaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaa 2435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 9939483 - 9939554
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| |||||||||||| ||||||| |||||| ||| ||| | ||||||| ||||| ||||||||    
T  9939483 gaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacac 9939554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 20036242 - 20036285
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaa 190  Q
    |||||||||||||||||||||||| ||||||  |||||||||||    
T  20036242 gaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaa 20036285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 22930203 - 22930148
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaagg 202  Q
    ||||||||| |||||||||||||| ||||| | | ||||||||||| |||||||||    
T  22930203 gaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggtaagg 22930148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 31382330 - 31382279
Alignment:
Q  166 tcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| ||||| | ||||||||||||| ||| ||||||||||||||||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggataaggctgcgtacaatacac 31382279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 35019252 - 35019323
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||| | ||||||||||| ||||||| |||||| ||||||| ||  ||||||||| ||||||||||    
T  35019252 gaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcatacaatacac 35019323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 49722708 - 49722641
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaata 214  Q
    ||||||||||||||| ||||| || ||||||| ||||||  || |||||||||||  |||||||||||    
T  49722708 gaaaggtcacgggtttaagtcatgtaaacaacctcttgtaaaataatagggtaagattgcgtacaata 49722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 19414461 - 19414530
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||  ||| | | |||| ||| |||| ||| ||||||||||||||||||||    
T  19414461 gaaaggtcacgggttcaagtcctagaaagagcctcttatgt-aaaacaggttaaggctgcgtacaatacac 19414530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 21723739 - 21723776
Alignment:
Q  180 tcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  21723739 tcttgtataaaaatagggtaaggctgagtacaatacac 21723776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 21910751 - 21910714
Alignment:
Q  180 tcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  21910751 tcttatgtaaaaatagggtaaggttgcgtacaatacac 21910714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 45402118 - 45402167
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggt 198  Q
    ||||| |||||||||||||||| ||||| | ||||||||||||| |||||    
T  45402118 aaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt 45402167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 50811961 - 50812033
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||  ||| |||||| ||||| | ||||||||  ||||| ||||||||| ||||||||||||||    
T  50811961 gaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgtacaatacac 50812033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 39215083 - 39215027
Alignment:
Q  159 gttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaata 214  Q
    |||||||| ||| ||||||| ||||||||| ||||  ||||||||||||||||||||    
T  39215083 gttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtacaata 39215027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 31457172 - 31457241
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||    
T  31457172 gaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaaaggctgcgtacaataca 31457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 18164895 - 18164825
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  18164895 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggttgcgtacaatacac 18164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 13160703 - 13160771
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  13160703 aaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 13160771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 45071266 - 45071334
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||| ||| ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  45071266 aaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 45071334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 35105922 - 35105993
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| | || |||||||||||||||||||||    
T  35105922 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacac 35105993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12670384 - 12670315
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  12670384 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 12670315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 7136663 - 7136594
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa-tagggtaaggctgcgtacaatacac 217  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||    
T  7136663 aaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgtacaatacac 7136594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 28817760 - 28817691
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  28817760 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 28817691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 36720797 - 36720866
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||    
T  36720797 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 36720866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 44530150 - 44530219
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||| || ||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  44530150 aaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 44530219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 26954133 - 26954203
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||  ||||| ||||||||||||||||||||||||    
T  26954133 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacac 26954203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 39461132 - 39461061
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||| |||| || |||||||||||||||||||||    
T  39461132 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacac 39461061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 44781642 - 44781571
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||| | |||||||||||| |||||||||||    
T  44781642 gaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgtacaatacac 44781571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 20869632 - 20869563
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| |||||||||||| |||||||||||    
T  20869632 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgtgtacaatacac 20869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 6760823 - 6760892
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | |||||||| ||||| ||||||||||| ||||||||||||    
T  6760823 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacac 6760892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 8897898 - 8897829
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| |||||||| |||||||  |||||||| |||||||||||||||| ||||||||||||    
T  8897898 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacac 8897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 29521819 - 29521750
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | |||||| | ||||| ||||||||||||||||||||||||    
T  29521819 aaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatacac 29521750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 389642 - 389715
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt---aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||   ||||| ||||||||| ||||||||||||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacac 389715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 20284209 - 20284136
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt---aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||| |   ||||| ||||||||||||||||||||||||    
T  20284209 gaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacac 20284136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 22598156 - 22598227
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||| ||||| ||||||| |||||||| ||||| |||||||||||  |||||||||||    
T  22598156 gaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacac 22598227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 8484069 - 8484003
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||| |||||||||||||| ||||||| ||||||||| |||| |||| |||||||||||||||||||    
T  8484069 gtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacac 8484003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 28407417 - 28407471
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggc 203  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||    
T  28407417 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggc 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 30454231 - 30454162
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| | ||||||||||||||| ||||||    
T  30454231 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacaaggtaaggctgcgtacgatacac 30454162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 2626518 - 2626592
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt----aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||    ||||| |||||||| |||||||||||||||    
T  2626518 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacac 2626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 21070838 - 21070764
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt----aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||| |    ||||| ||||||||||||||||||||||||    
T  21070838 gaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacac 21070764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 5135418 - 5135354
Alignment:
Q  154 cacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||| ||||| | ||||||||| |||| |||||||||||| |||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacac 5135354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 17823575 - 17823646
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa-tagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||  ||| |||| ||||||| |||||||    
T  17823575 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaaaatacac 17823646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 12625891 - 12625960
Alignment:
Q  150 aggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| |||||||||| ||||||| ||||||||  ||||| |||||||| |||| ||||||||||    
T  12625891 aggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacac 12625960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 25250523 - 25250592
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||||||  |||||||||||| ||||| | | |||||||||| |||||||| |||||||||||||||||    
T  25250523 aaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacac 25250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 35261680 - 35261749
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||| |||| |||||   |||||||| ||||| ||||||||| ||||||||||||||    
T  35261680 aaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatacac 35261749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 42083835 - 42083770
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtaca 211  Q
    |||||||||||||||||||||||| ||||| | | ||||||| ||||| ||| |||||||||||||    
T  42083835 gaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgtaca 42083770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 30962909 - 30962847
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgt 208  Q
    |||||||||||  ||||||||||| ||||| | ||||||||| |||||||||| |||||||||    
T  30962909 gaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcgt 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 5689640 - 5689701
Alignment:
Q  157 gggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||||||| || ||| | | |||||||||||||  ||||||||||||||||||||||||    
T  5689640 gggttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacac 5689701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 44742653 - 44742584
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||| | |||||||| ||| ||||||  || ||||||||||  ||||||||||||||||||||||||    
T  44742653 aaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggctgcgtacaatacac 44742584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 24365191 - 24365124
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa--tagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||| |||  ||||| | |||||||||||||   |||||||||||||| |||||||||    
T  24365191 gtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacac 24365124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 41014320 - 41014388
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  41014320 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 41014388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 42924970 - 42924899
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  42924970 gaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacac 42924899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 32703423 - 32703492
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  32703423 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 32703492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 35710312 - 35710381
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||| ||||||||    
T  35710312 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaatagggtaaggctgcgttcaatacac 35710381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 24448891 - 24448960
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | | |||||||||| ||||||||||||||||||||||||||    
T  24448891 aaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatacac 24448960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 19143067 - 19143008
Alignment:
Q  158 ggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19143067 ggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggctgcgtacagtacac 19143008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 38879580 - 38879651
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||| | ||||| ||||||||||||||||||||||||    
T  38879580 gaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacac 38879651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 8170118 - 8170049
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | | |||||| |||| ||||||||||||||||||||||||    
T  8170118 gaaaggtcacgggttcaagtcctggaaacagccttttgtgt-aaaacagggtaaggctgcgtacaatacac 8170049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 4619240 - 4619171
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||| | | ||||||||| |||| ||||||||||||||||||||||||    
T  4619240 aaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 4619171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 37024690 - 37024626
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaa 212  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| |||||||||||||||||||    
T  37024690 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 43334201 - 43334273
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | || |||||  ||||| ||||||||||||||||||||||||    
T  43334201 gaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgtacaatacac 43334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 23974781 - 23974840
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcg 207  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||    
T  23974781 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27328751 - 27328822
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| |||||   |||||||| ||||| ||||||||||||||||||||||||    
T  27328751 gaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 27328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 209062 - 208993
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||  ||||||||||||  |||||| ||||||||||||| ||||||||||||| | ||||||||    
T  209062 aaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggtaaggctgcattcaatacac 208993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 1850639 - 1850708
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||||| ||  ||||| |||||||||||||    
T  1850639 gaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacagaataagggtgcgtacaataca 1850708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 2838803 - 2838848
Alignment:
Q  172 aaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2838803 aaacagcatcttgtgtaaaaacagggtaaggctgcgtacaatacac 2838848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 22600455 - 22600524
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||| |||||||||||||||| |||||| || |||||||||| | |||||||||||| |||||||||||    
T  22600455 aaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctgtgtacaatacac 22600524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 43574609 - 43574673
Alignment:
Q  151 ggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaata 214  Q
    ||||||| |||||||||||| ||||||  ||||||||| |||| |||||||||||||||||||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaata 43574673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 28516570 - 28516500
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaataca 216  Q
    ||||||||||||||||||||| || ||||| | ||||||||| |||| ||| || ||||||||||||||||    
T  28516570 gaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaataca 28516500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 41425952 - 41426018
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||| ||| ||||||| | |||||| ||||| ||||||||||||| ||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacac 41426018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 1405188 - 1405257
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||||| |||| | | |||||||| |||||  ||||||||||||||    
T  1405188 aaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacac 1405257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 13801895 - 13801834
Alignment:
Q  157 gggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||||||| || || | |||||||||||||  ||||||||||||||||||||||||    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 13801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 7097872 - 7097825
Alignment:
Q  170 gaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  7097872 gaaaacagcctcttgtgtaaaaacagggtaaggttgcgtacaatacac 7097825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 22025542 - 22025601
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctg 205  Q
    ||||||||| |||||||||||||| ||||| | |||||||| ||||| ||||||||||||    
T  22025542 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 22025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 39301122 - 39301185
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgta 209  Q
    ||||||||||||||||||||| ||  |||||| ||||||||| |||| ||||||||| ||||||    
T  39301122 gaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaaggatgcgta 39301185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 7368413 - 7368466
Alignment:
Q  163 aagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||| ||||| | ||||||||||||  ||||||||||||||||||||||||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaac-agggtaaggctgcgtacaatacac 7368466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 22908000 - 22907930
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| ||||||||||||   ||||| | ||||||||||||| || |||||| ||| ||||||||||    
T  22908000 gaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagtaaggttgcatacaatacac 22907930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 1565430 - 1565475
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||| ||||||||||||||| ||||||| ||||| |||||||    
T  1565430 gaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaa 1565475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 9794494 - 9794466
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaaca 176  Q
    |||||||||||||||||||||||||||||    
T  9794494 aaaggtcacgggttcaagtcctgaaaaca 9794466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12006466 - 12006395
Alignment:
Q  147 gaaaggtcacggg-ttcaagtcctgaaaacaacatcttgtgtaaaaa-tagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| |||||||| || ||||||| |||| |||||||| |||||||||||| | ||||||||||    
T  12006466 gaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatacaatacac 12006395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 29355993 - 29355922
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||||| ||| ||||||||||||||||||||||||    
T  29355993 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacac 29355922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 9161122 - 9161191
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||| ||||||||||||| ||||| | ||||||||||||| || ||||||||||||||||||||    
T  9161122 gaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagtaaggctgcgtacaataca 9161191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 2166548 - 2166477
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| | ||| ||||| ||||||||||||||    
T  2166548 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacac 2166477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 2178181 - 2178110
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| | ||| ||||| ||||||||||||||    
T  2178181 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacac 2178110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12222053 - 12221982
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||| || ||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  12222053 gaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 12221982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 1346963 - 1347032
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| |  ||||||| |||| ||||||||||||||||||||||||    
T  1346963 gaaaggtcacgggttcaagtcctggaaacagccacttgtgt-aaaacagggtaaggctgcgtacaatacac 1347032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 1354891 - 1354822
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  1354891 gaaaggtcactggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 1354822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 17448323 - 17448389
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaa 212  Q
    ||||||||||||||||||||  |||||||||||| |||||| ||||| |||||||||||||||||||    
T  17448323 gaaaggtcacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaaggctgcgtacaa 17448389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 7947508 - 7947437
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||| ||||| ||||||| || ||||||||||  ||||||||||||||||||||||||    
T  7947508 gaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgtacaatacac 7947437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 13905115 - 13905048
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaat 213  Q
    ||||||||||||| ||||||||||||||| || ||||||||| |||| ||||||||||||| ||||||    
T  13905115 gaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgcatacaat 13905048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 4136648 - 4136590
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgta 209  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||||    
T  4136648 gtcacgggttcaagtcctaaaaacaacatcttgtgtaaaatacagggtaaggttgcgta 4136590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 8409242 - 8409311
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatac 215  Q
    |||||||||||| ||||||||||| ||||  | |||||||| ||||| ||||||||||||||||||||||    
T  8409242 gaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 17432339 - 17432384
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  17432339 gaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaa 17432384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 28007628 - 28007696
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||| ||| | | |||||||| |||| ||||| ||||||||||||||||||    
T  28007628 aaaggtcacgggttcaagtcctggaaagagcctcttgtgt-aaaacagggtcaggctgcgtacaatacac 28007696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 22967172 - 22967235
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaa 212  Q
    ||||||||  ||||||||| || ||||||| ||||||||||||||||| ||||||||| |||||    
T  22967172 aaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaataggataaggctgcatacaa 22967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 23821221 - 23821158
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaa 212  Q
    ||||||||  ||||||||| || ||||||| ||||||||||||||||| ||||||||| |||||    
T  23821221 aaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaataggataaggctgcatacaa 23821158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 14553511 - 14553581
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| ||||||||||||| ||| | | |||||||| |||||||||||||||||| ||| |||||||    
T  14553511 aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacac 14553581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 1941856 - 1941925
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||| ||| || ||||| || ||||||| |||||||||||||  ||||||||||||||||||||||||    
T  1941856 aaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 1941925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 33138838 - 33138903
Alignment:
Q  153 tcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||| ||||||| |||||| | ||||| || ||||||| |||||||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacac 33138903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 32579436 - 32579493
Alignment:
Q  158 ggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatac 215  Q
    ||||||||||||| ||||| | ||| || |||||||| |||||| |||||||||||||    
T  32579436 ggttcaagtcctggaaacagcctctggtataaaaatacggtaagcctgcgtacaatac 32579493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 18277328 - 18277264
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtaca 211  Q
    ||||||||||||||||| || || ||||| | |||||||||||||| ||||||||| || |||||    
T  18277328 aaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaaggttgagtaca 18277264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 13628928 - 13628857
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||||| ||| ||||||||||||||||||||||||    
T  13628928 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacac 13628857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 1217111 - 1217180
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  1217111 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 1217180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 10870087 - 10870025
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgta 209  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||    
T  10870087 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 26869728 - 26869798
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  26869728 gaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggtaaggctgcgtacaatacac 26869798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 46421172 - 46421102
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||||||    
T  46421172 aaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 46421102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 40272946 - 40272877
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  40272946 aaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 40272877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 45948972 - 45948903
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  45948972 aaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgcatacaatacac 45948903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 54032693 - 54032624
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  54032693 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacac 54032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 22609789 - 22609857
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||| ||||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  22609789 aaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 22609857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 6411954 - 6411887
Alignment:
Q  150 aggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||| ||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||    
T  6411954 aggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 6411887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 8247825 - 8247754
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||| ||||||||||||||    
T  8247825 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtacaatacac 8247754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 26573148 - 26573219
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | || ||||| ||||| ||||||||||||||||||||||||    
T  26573148 gaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacac 26573219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34420780 - 34420709
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||| ||||||    
T  34420780 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacac 34420709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 54374482 - 54374415
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaat 213  Q
    |||||||||| |||||||||| || ||||||| ||||||||| |||||||||||||||||||||||||    
T  54374482 gaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaat 54374415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 29366857 - 29366787
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||| ||||| | |||||| | ||||| ||||||||||||||||||||||||    
T  29366857 aaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacac 29366787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 33926104 - 33926174
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||| ||| | | ||||||||||||| |||||||||||| |||||||||||    
T  33926104 gaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggtaaggctgtgtacaatacac 33926174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 4495798 - 4495729
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||||| | | | ||||||| |||| ||||||||||||||||||||||||    
T  4495798 aaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacac 4495729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 7697020 - 7696952
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||| |||||   |||||||| |||| ||||||||||||||||||||||||    
T  7697020 aaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaacagggtaaggctgcgtacaatacac 7696952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 13730738 - 13730669
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||| ||||| | ||||||||| |||| |||||||||||| |||||||||||    
T  13730738 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacac 13730669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 45620965 - 45620893
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta--aaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||| ||| ||||| | |||||||||  |||| ||||||||||||||||||||||||    
T  45620965 gaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacac 45620893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 516430 - 516498
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaata 214  Q
    |||||||||||||||||||||||| ||||| | |||||||| ||||| |||||||||||||| ||||||    
T  516430 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaata 516498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 10795554 - 10795490
Alignment:
Q  154 cacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||| ||||| | |||||||||||| | ||||||||||||||||||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacac 10795490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 45139614 - 45139543
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||  || ||||||| |||||||||||| | ||||||||||||| ||||||||||    
T  45139614 gaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacac 45139543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 53996702 - 53996631
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| ||||||||| || ||||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  53996702 gaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacac 53996631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 5173856 - 5173786
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |  |||||| ||| | ||||||||    
T  5173856 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagtaaggttgcatgcaatacac 5173786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 22123051 - 22122982
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||| ||||||||||||||| |||||   ||||||||||||  ||||||||||||||||||||||||    
T  22123051 gaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaac-agggtaaggctgcgtacaatacac 22122982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 31592878 - 31592939
Alignment:
Q  155 acgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||    
T  31592878 acgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 31592939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 16735467 - 16735532
Alignment:
Q  152 gtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||  ||||| | ||||||  ||||| ||||||||||||||||||||||||    
T  16735467 gtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggtaaggctgcgtacaatacac 16735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 7943013 - 7943081
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||| ||||||||||| ||||| |||||||| | ||||| |||||||| ||||||||||||||    
T  7943013 aaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaataca 7943081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 14986989 - 14987049
Alignment:
Q  158 ggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    ||||||||||||| ||||| | |||||||||||||  ||||||||||||||||||||||||    
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 14987049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 1121361 - 1121290
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||| ||||| ||| || |||||||||||||||    
T  1121361 gaaaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacac 1121290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12914171 - 12914100
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgta-aaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||  |||||||||||| ||||| | ||||||||| |||| |||||||||| |||||||||||||    
T  12914171 gaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacac 12914100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 29106571 - 29106641
Alignment:
Q  148 aaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||| |||||||| |||||| |||||||||| |||||||| ||||||||| ||||| | ||||||||||||    
T  29106571 aaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataaggttacgtacaatacac 29106641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 39203537 - 39203606
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||  ||||| | |||||||| |||| ||||||||| ||||||||||||||    
T  39203537 gaaaggtcacaggttcaagtccttgaaacagcctcttgtgt-aaaacagggtaaggttgcgtacaatacac 39203606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 39212011 - 39212081
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaa-aatagggtaaggctgcgtacaataca 216  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||| || | |||||| ||||||||||||||    
T  39212011 gaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

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Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 47624087 - 47624133
Alignment:
Q  171 aaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  47624087 aaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacac 47624133  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 12525428 - 12525489
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcg 207  Q
    |||||||||| ||||| ||||||| ||||| | |||||||||||||| ||||||||||||||    
T  12525428 gaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggctgcg 12525489  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 21875042 - 21875106
Alignment:
Q  155 acgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| | ||| ||||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  21875042 acgggttcaaattctggaaacaacctcttgtgttaaaaaagagggtaaggctgcgtacaatacac 21875106  T

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Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 30928283 - 30928238
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||    
T  30928283 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 30928238  T

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Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 52428614 - 52428542
Alignment:
Q  147 gaaaggtcacgggttcaagtc-ctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||| ||||| ||| || || | |||||||||||| | ||||||||||||||||||||||||    
T  52428614 gaaaggtcacgggtttaagtctctggaagcagcctcttgtgtaaaatacagggtaaggctgcgtacaatacac 52428542  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 9607224 - 9607295
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||  ||||||||||||| ||||| | ||||| || ||||| |||||||||||||||| |||||||    
T  9607224 gaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacac 9607295  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 19751599 - 19751670
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaat-agggtaaggctgcgtacaatacac 217  Q
    |||||||||||| | ||||||||| ||| | | |||||||||||||| | ||||||| ||||||||||||||    
T  19751599 gaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacac 19751670  T

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Target: scaffold0057 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 46832 - 46901
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  46832 aaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacac 46901  T

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Target: scaffold0254 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 4156 - 4227
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaa-atagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| | ||| ||||| ||||||||||||||    
T  4156 gaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaatacac 4227  T

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Target: scaffold1176 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 1721 - 1652
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||| |||||||||||||||||||||| |||||||| |||| ||| ||||||||| ||||||||||    
T  1721 gaaaggtcatgggttcaagtcctgaaaacaacctcttgtgt-aaaacaggataaggctgcatacaatacac 1652  T

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Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 13159 - 13089
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | ||||| ||||||| | ||||||||||||||||||||||    
T  13159 gaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggtaaggctgcgtacaatacac 13089  T

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Target: scaffold0258; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 192
Target Start/End: Original strand, 16733 - 16772
Alignment:
Q  153 tcacgggttcaagtcctgaaaacaacatcttgtgtaaaaa 192  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  16733 tcacgggttcaagtcctgaaaacaacttcttatgtaaaaa 16772  T

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Target: scaffold0049 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 58976 - 59047
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||| | ||||| |||||||| |||||||||||||||    
T  58976 gaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacac 59047  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 35152 - 35082
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatct--tgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||||||||||||||||||||   |||  ||||| |||| ||||||||||||||||||||||||    
T  35152 aaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaatacac 35082  T

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Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 10184 - 10115
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| || ||||| |||||||||||||||    
T  10184 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagagtaagactgcgtacaatacac 10115  T

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Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 20512 - 20443
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| || ||||| |||||||||||||||    
T  20512 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagagtaagactgcgtacaatacac 20443  T

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Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 30578 - 30647
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||| ||||||||||||| ||||| | |||||||| |||| |||||| |||||||||||||||||    
T  30578 gaaaggtcaccggttcaagtcctggaaacagcctcttgtgt-aaaacagggtagggctgcgtacaatacac 30647  T

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Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 10811 - 10880
Alignment:
Q  149 aaggtcacgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||  ||||||||||| |||||||| ||||| |||||| |||||||| ||||||||    
T  10811 aaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacac 10880  T

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Target: scaffold0223 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 11130 - 11199
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||| |  |||||||||| ||||||||||    
T  11130 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacaaagtaaggctgcttacaatacac 11199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 23606 - 23665
Alignment:
Q  155 acgggttcaagtcctgaaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaat 213  Q
    ||||||||||||| || ||||||| |||||||| ||||| ||||| ||||||||||||||    
T  23606 acgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgtacaat 23665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 48758 - 48699
Alignment:
Q  157 gggttcaagtcctgaaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacac 217  Q
    ||||||||||  || ||||| | ||||||||||||  ||||||||||||||||||||||||    
T  48758 gggttcaagtggtggaaacagcctcttgtgtaaaac-agggtaaggctgcgtacaatacac 48699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 226542 - 226471
Alignment:
Q  147 gaaaggtcacgggttcaagtcctgaaaacaacatcttgtgt--aaaaatagggtaaggctgcgtacaataca 216  Q
    |||||||||||| ||||||||||  ||||| | |||||| |  ||||| ||||||||||||| |||||||||    
T  226542 gaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaataca 226471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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