View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1498_low_91 (Length: 388)
Name: NF1498_low_91
Description: NF1498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1498_low_91 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 11 - 370
Target Start/End: Original strand, 36403473 - 36403823
Alignment:
| Q |
11 |
cacagagaaagatggaaaaggagacttaagaggctctaaagaaatataaaaagtctacattattattgtacaacttaatacaatgacaataattaattaa |
110 |
Q |
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| T |
36403473 |
cacaaagaaagatggaaaaggaaacttaagaggctctaaagaaatataaaaagtctacattattattgtacaacttaatacaatgacaataattaattaa |
36403572 |
T |
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| Q |
111 |
agtaaaggcagactaggattgatgtgaaaatatcaagattttttataaaaataaataaggataataattggtgtacatatcatatggtgtaacatctcga |
210 |
Q |
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| T |
36403573 |
agtaaaggcagactaggattgatgtgaaaatatcaagattttttataaaaataaataaggataataattggtgtacatatcatatggtgtaacatctcga |
36403672 |
T |
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| Q |
211 |
gagaagtatataaaatgaatgaagctatagaagttatagaagtgataagtttgtaacttgatagaaagagaaagataaaatcaagtgttgaaagagtatt |
310 |
Q |
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| T |
36403673 |
gagaagtatataaaatgaatgaagc---------tatagaagtgataagtttgtaacttgatagaaagagaaagataaaatcaagtgttgaaagagtatt |
36403763 |
T |
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| Q |
311 |
aggtaatatcaagtgtacaaatatcactgttgaaaaaaccacaacacaagagcacaagaa |
370 |
Q |
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| T |
36403764 |
aggtaatatcaaatgtacaaatatcactgttgaaaaaaccacaatacaagagtacaagaa |
36403823 |
T |
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