View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14991_low_6 (Length: 266)
Name: NF14991_low_6
Description: NF14991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14991_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 41752952 - 41752710
Alignment:
| Q |
1 |
tacaacaaaaatcatatattttaagaaaaattccaacaaagaaatttccacagtacgtaattaatattccacctgtaaaattaaannnnnnnnaatagga |
100 |
Q |
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| T |
41752952 |
tacaacaaaaatcatatattttaagaaaaattccaacaaagaaatttccacagta----attaatattccacctgtaaaattaa-ttttttttaatagga |
41752858 |
T |
|
| Q |
101 |
aaatccaaacttaaagatagaaaaaacattactcccttaccaatagttgaggtattgcctgaatagaaagtggaggtgtagaagatagattgaaaagaga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41752857 |
aaatccaaacttaaagatagaaaaaacattactcccttaccaatatttgagggattgcctgaatagaaagtggaggtgtagaagatagattgaaaagaga |
41752758 |
T |
|
| Q |
201 |
atcatcagagatagctttgacttctttgttatgaaaatcaacagcagc |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41752757 |
atcatcagagatagctttgacttctttgttatgaaaatcaacagcagc |
41752710 |
T |
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