View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14993_low_3 (Length: 372)

Name: NF14993_low_3
Description: NF14993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14993_low_3
NF14993_low_3
[»] chr4 (62 HSPs)
chr4 (200-355)||(55642804-55642959)
chr4 (39-177)||(33914057-33914196)
chr4 (45-177)||(25147719-25147852)
chr4 (39-177)||(5399607-5399746)
chr4 (39-167)||(9058952-9059080)
chr4 (49-177)||(22168266-22168395)
chr4 (39-177)||(1638445-1638584)
chr4 (49-177)||(27040035-27040164)
chr4 (49-177)||(32175747-32175876)
chr4 (49-177)||(37378633-37378762)
chr4 (49-177)||(46286239-46286368)
chr4 (55-177)||(2275694-2275817)
chr4 (49-167)||(38619856-38619974)
chr4 (49-177)||(55309222-55309352)
chr4 (49-177)||(8878881-8879010)
chr4 (49-177)||(22128322-22128451)
chr4 (49-167)||(38645759-38645877)
chr4 (49-177)||(18051837-18051966)
chr4 (49-177)||(19839177-19839306)
chr4 (39-167)||(12105992-12106119)
chr4 (38-177)||(45532578-45532718)
chr4 (49-167)||(9670489-9670607)
chr4 (49-167)||(29625334-29625452)
chr4 (49-167)||(30507996-30508114)
chr4 (49-177)||(5473847-5473976)
chr4 (39-164)||(9238625-9238750)
chr4 (37-177)||(12071960-12072101)
chr4 (49-177)||(36689675-36689804)
chr4 (49-161)||(4586768-4586880)
chr4 (49-177)||(24682337-24682464)
chr4 (49-177)||(13564925-13565054)
chr4 (49-173)||(19680434-19680559)
chr4 (49-177)||(30268998-30269127)
chr4 (49-177)||(30283062-30283191)
chr4 (90-177)||(22156652-22156740)
chr4 (55-174)||(38223511-38223631)
chr4 (49-156)||(44783502-44783610)
chr4 (38-161)||(25026572-25026695)
chr4 (49-167)||(7111956-7112074)
chr4 (49-146)||(18714932-18715029)
chr4 (49-177)||(30568009-30568138)
chr4 (55-167)||(9239297-9239409)
chr4 (49-161)||(13028826-13028938)
chr4 (69-160)||(313603-313694)
chr4 (38-167)||(4606828-4606957)
chr4 (49-177)||(16915367-16915496)
chr4 (55-159)||(9913275-9913379)
chr4 (69-167)||(6553813-6553911)
chr4 (69-167)||(14944755-14944853)
chr4 (49-167)||(42055406-42055524)
chr4 (69-177)||(18744100-18744209)
chr4 (49-161)||(54539301-54539413)
chr4 (49-177)||(39234940-39235068)
chr4 (48-169)||(29238429-29238551)
chr4 (49-155)||(30420043-30420149)
chr4 (109-173)||(37761912-37761977)
chr4 (49-161)||(4627088-4627200)
chr4 (39-159)||(3613012-3613133)
chr4 (82-163)||(23104362-23104442)
chr4 (112-161)||(45091289-45091338)
chr4 (49-148)||(25225127-25225224)
chr4 (55-135)||(34557224-34557304)
[»] chr7 (65 HSPs)
chr7 (38-177)||(39979623-39979763)
chr7 (37-177)||(40847433-40847574)
chr7 (56-177)||(36636506-36636628)
chr7 (38-167)||(4514776-4514905)
chr7 (38-167)||(1824199-1824328)
chr7 (35-167)||(26577276-26577408)
chr7 (49-177)||(23232039-23232168)
chr7 (39-177)||(31425511-31425650)
chr7 (55-177)||(47523666-47523789)
chr7 (36-177)||(15014402-15014544)
chr7 (49-177)||(22486394-22486523)
chr7 (39-177)||(1907355-1907494)
chr7 (48-177)||(20174020-20174150)
chr7 (48-177)||(24140450-24140580)
chr7 (49-177)||(21917344-21917473)
chr7 (49-177)||(27806018-27806147)
chr7 (49-177)||(28800878-28801007)
chr7 (49-177)||(37135295-37135424)
chr7 (48-177)||(2457670-2457798)
chr7 (49-177)||(7733322-7733451)
chr7 (49-177)||(11036507-11036636)
chr7 (49-177)||(18217829-18217958)
chr7 (49-177)||(24605838-24605967)
chr7 (38-177)||(48933136-48933276)
chr7 (39-177)||(36993820-36993959)
chr7 (49-173)||(1842898-1843023)
chr7 (49-177)||(23577199-23577328)
chr7 (49-167)||(3872197-3872315)
chr7 (49-167)||(3904488-3904606)
chr7 (49-159)||(11852027-11852137)
chr7 (49-177)||(816201-816330)
chr7 (49-177)||(20429465-20429594)
chr7 (49-177)||(23750746-23750875)
chr7 (49-177)||(6849221-6849350)
chr7 (49-177)||(9698548-9698677)
chr7 (69-177)||(10050866-10050975)
chr7 (48-177)||(27304872-27305000)
chr7 (49-161)||(23539249-23539361)
chr7 (49-161)||(33427707-33427818)
chr7 (49-177)||(20923968-20924097)
chr7 (53-177)||(22501594-22501719)
chr7 (49-177)||(23699835-23699964)
chr7 (49-173)||(38057636-38057761)
chr7 (49-161)||(21623038-21623149)
chr7 (55-177)||(42926435-42926559)
chr7 (49-160)||(2650838-2650949)
chr7 (55-177)||(31042251-31042374)
chr7 (69-177)||(11890177-11890286)
chr7 (34-159)||(14786630-14786755)
chr7 (49-161)||(15969801-15969914)
chr7 (81-177)||(45664768-45664865)
chr7 (53-174)||(32267350-32267471)
chr7 (39-167)||(1821996-1822121)
chr7 (49-167)||(2093372-2093490)
chr7 (49-139)||(21871607-21871697)
chr7 (49-177)||(26415424-26415553)
chr7 (57-155)||(10222648-10222745)
chr7 (49-177)||(27132731-27132860)
chr7 (55-173)||(25777128-25777247)
chr7 (48-146)||(1841792-1841889)
chr7 (49-173)||(27130338-27130461)
chr7 (39-105)||(38090336-38090402)
chr7 (101-177)||(687877-687954)
chr7 (90-154)||(15330256-15330320)
chr7 (119-148)||(5235420-5235449)
[»] chr3 (89 HSPs)
chr3 (38-177)||(30219334-30219474)
chr3 (39-176)||(19610335-19610473)
chr3 (39-177)||(16299857-16299996)
chr3 (38-167)||(15063991-15064120)
chr3 (39-177)||(29215988-29216127)
chr3 (39-167)||(50665636-50665764)
chr3 (38-177)||(25882566-25882706)
chr3 (49-177)||(27449084-27449213)
chr3 (39-167)||(5744423-5744551)
chr3 (39-167)||(5781382-5781510)
chr3 (39-177)||(18091547-18091686)
chr3 (39-177)||(49915447-49915586)
chr3 (49-177)||(11915754-11915883)
chr3 (49-177)||(18104540-18104669)
chr3 (39-148)||(37283549-37283658)
chr3 (38-177)||(19269863-19270003)
chr3 (49-167)||(26098820-26098938)
chr3 (49-177)||(5260933-5261062)
chr3 (49-177)||(18539800-18539929)
chr3 (49-177)||(19223445-19223574)
chr3 (49-177)||(26390644-26390773)
chr3 (49-177)||(36543745-36543874)
chr3 (54-177)||(17762638-17762762)
chr3 (54-177)||(19063958-19064082)
chr3 (49-161)||(48404873-48404985)
chr3 (55-177)||(8428167-8428290)
chr3 (49-160)||(10941675-10941786)
chr3 (39-177)||(21020061-21020200)
chr3 (49-177)||(1628211-1628340)
chr3 (49-177)||(4393360-4393489)
chr3 (49-177)||(7623541-7623670)
chr3 (49-177)||(8110335-8110464)
chr3 (49-177)||(9652574-9652703)
chr3 (49-177)||(11007693-11007822)
chr3 (36-161)||(13921338-13921463)
chr3 (69-177)||(17582331-17582440)
chr3 (37-161)||(21088765-21088887)
chr3 (49-177)||(29704042-29704171)
chr3 (39-167)||(1745488-1745615)
chr3 (49-161)||(11837224-11837336)
chr3 (49-167)||(13905048-13905166)
chr3 (49-177)||(11085352-11085481)
chr3 (49-177)||(28389969-28390098)
chr3 (49-177)||(36564449-36564578)
chr3 (49-176)||(1310969-1311097)
chr3 (49-161)||(21816734-21816846)
chr3 (39-159)||(23217208-23217328)
chr3 (39-177)||(26830441-26830581)
chr3 (49-167)||(5565729-5565847)
chr3 (49-167)||(17269614-17269732)
chr3 (49-167)||(23773484-23773602)
chr3 (39-161)||(29236057-29236179)
chr3 (49-167)||(43329773-43329891)
chr3 (49-167)||(46012738-46012856)
chr3 (49-177)||(11219134-11219263)
chr3 (69-177)||(19545506-19545615)
chr3 (49-173)||(29956372-29956497)
chr3 (49-173)||(30005527-30005652)
chr3 (49-167)||(3461320-3461438)
chr3 (53-174)||(31250087-31250209)
chr3 (49-154)||(8546265-8546370)
chr3 (49-177)||(27968911-27969040)
chr3 (39-177)||(8543465-8543603)
chr3 (82-175)||(20088398-20088492)
chr3 (55-161)||(28859604-28859710)
chr3 (81-177)||(27212823-27212920)
chr3 (37-175)||(27182656-27182793)
chr3 (69-164)||(6718720-6718815)
chr3 (39-177)||(15490031-15490169)
chr3 (39-158)||(31433753-31433872)
chr3 (49-167)||(6088238-6088356)
chr3 (49-177)||(10803716-10803846)
chr3 (49-167)||(21490044-21490162)
chr3 (49-159)||(46942502-46942612)
chr3 (38-137)||(6447245-6447344)
chr3 (49-177)||(18380020-18380149)
chr3 (49-134)||(20761960-20762045)
chr3 (49-177)||(29451090-29451219)
chr3 (38-177)||(20615344-20615482)
chr3 (69-167)||(50240753-50240851)
chr3 (90-167)||(23233214-23233291)
chr3 (49-161)||(47263275-47263387)
chr3 (91-161)||(10772106-10772176)
chr3 (107-156)||(27711236-27711285)
chr3 (49-173)||(26963259-26963384)
chr3 (119-161)||(35579605-35579647)
chr3 (38-156)||(13615433-13615551)
chr3 (37-74)||(23233182-23233219)
chr3 (50-134)||(45304374-45304458)
[»] scaffold0058 (1 HSPs)
scaffold0058 (36-177)||(74538-74680)
[»] chr8 (65 HSPs)
chr8 (49-177)||(17824626-17824755)
chr8 (49-177)||(17103875-17104004)
chr8 (49-177)||(8555314-8555443)
chr8 (38-177)||(3823131-3823271)
chr8 (49-167)||(10917836-10917954)
chr8 (35-177)||(18844540-18844683)
chr8 (36-177)||(27869236-27869378)
chr8 (48-177)||(37992097-37992227)
chr8 (49-177)||(4330976-4331105)
chr8 (49-177)||(19240865-19240994)
chr8 (49-177)||(19314049-19314178)
chr8 (49-177)||(24576034-24576163)
chr8 (49-177)||(33652565-33652694)
chr8 (49-167)||(32247918-32248036)
chr8 (49-177)||(17810296-17810425)
chr8 (49-177)||(18010070-18010199)
chr8 (49-177)||(24193206-24193335)
chr8 (49-177)||(27910774-27910903)
chr8 (49-177)||(27957193-27957322)
chr8 (39-143)||(8789873-8789977)
chr8 (49-161)||(19488071-19488183)
chr8 (49-167)||(13060941-13061059)
chr8 (49-167)||(25655868-25655986)
chr8 (49-177)||(22939311-22939440)
chr8 (49-177)||(43431569-43431698)
chr8 (49-161)||(11938760-11938871)
chr8 (49-161)||(19256227-19256339)
chr8 (39-177)||(6816383-6816522)
chr8 (60-167)||(26399028-26399135)
chr8 (49-177)||(16061949-16062078)
chr8 (49-177)||(21350476-21350605)
chr8 (49-161)||(30466964-30467076)
chr8 (37-167)||(23752284-23752414)
chr8 (49-177)||(29350921-29351051)
chr8 (49-177)||(4647765-4647894)
chr8 (49-177)||(9915051-9915179)
chr8 (38-177)||(32961657-32961797)
chr8 (49-167)||(25273338-25273455)
chr8 (64-161)||(5670194-5670291)
chr8 (79-167)||(19493695-19493784)
chr8 (52-161)||(24636667-24636776)
chr8 (49-146)||(30687966-30688063)
chr8 (49-177)||(21219250-21219377)
chr8 (55-177)||(40289437-40289559)
chr8 (49-167)||(8824834-8824952)
chr8 (49-159)||(15251619-15251728)
chr8 (49-174)||(29345072-29345198)
chr8 (49-167)||(31399518-31399636)
chr8 (49-177)||(6817052-6817181)
chr8 (49-161)||(25000441-25000553)
chr8 (79-177)||(5879202-5879301)
chr8 (39-177)||(31344172-31344311)
chr8 (49-177)||(9631401-9631531)
chr8 (55-166)||(33412992-33413097)
chr8 (36-159)||(17003279-17003402)
chr8 (69-167)||(41527730-41527828)
chr8 (49-146)||(6084256-6084351)
chr8 (82-177)||(3692214-3692310)
chr8 (87-160)||(15289660-15289731)
chr8 (87-160)||(15470029-15470100)
chr8 (49-119)||(25274654-25274724)
chr8 (48-135)||(2265388-2265474)
chr8 (49-125)||(42700667-42700743)
chr8 (49-167)||(14304238-14304356)
chr8 (115-156)||(24479874-24479915)
[»] chr6 (77 HSPs)
chr6 (38-177)||(22083838-22083978)
chr6 (39-177)||(12951708-12951847)
chr6 (39-177)||(18033526-18033664)
chr6 (49-167)||(11077660-11077778)
chr6 (37-177)||(11530225-11530366)
chr6 (38-177)||(22579348-22579488)
chr6 (36-177)||(28364911-28365053)
chr6 (49-177)||(9892963-9893092)
chr6 (39-177)||(2992615-2992754)
chr6 (48-167)||(14872130-14872249)
chr6 (49-177)||(6598464-6598593)
chr6 (49-177)||(15364468-15364597)
chr6 (49-177)||(24661019-24661148)
chr6 (49-177)||(25398002-25398131)
chr6 (37-155)||(6978300-6978418)
chr6 (49-177)||(495637-495766)
chr6 (49-177)||(12200694-12200823)
chr6 (57-177)||(12845003-12845124)
chr6 (49-177)||(14886561-14886690)
chr6 (49-177)||(26224428-26224557)
chr6 (49-159)||(5360428-5360538)
chr6 (39-149)||(14772690-14772800)
chr6 (49-177)||(1939252-1939381)
chr6 (49-177)||(11049761-11049890)
chr6 (49-177)||(21140939-21141068)
chr6 (49-177)||(27796844-27796973)
chr6 (39-177)||(18048788-18048927)
chr6 (63-177)||(23281786-23281901)
chr6 (49-167)||(5192199-5192317)
chr6 (49-167)||(6605506-6605624)
chr6 (49-177)||(20182145-20182274)
chr6 (49-177)||(22153717-22153846)
chr6 (54-177)||(33250723-33250847)
chr6 (36-167)||(6065448-6065579)
chr6 (79-177)||(27705422-27705521)
chr6 (49-167)||(12499227-12499345)
chr6 (49-167)||(12506556-12506674)
chr6 (49-167)||(12509556-12509674)
chr6 (49-177)||(2669309-2669438)
chr6 (57-177)||(12351604-12351725)
chr6 (49-177)||(21990185-21990313)
chr6 (49-177)||(26939587-26939716)
chr6 (49-177)||(30833970-30834099)
chr6 (49-161)||(15448402-15448514)
chr6 (48-177)||(22055621-22055751)
chr6 (49-177)||(9885243-9885372)
chr6 (48-167)||(11350193-11350309)
chr6 (49-177)||(16250812-16250941)
chr6 (49-177)||(18492369-18492498)
chr6 (39-177)||(21691495-21691635)
chr6 (79-167)||(33547557-33547645)
chr6 (49-167)||(20692821-20692939)
chr6 (49-177)||(9060091-9060219)
chr6 (49-177)||(12160857-12160985)
chr6 (80-167)||(13145013-13145100)
chr6 (49-148)||(15509186-15509285)
chr6 (49-159)||(12205195-12205305)
chr6 (49-167)||(15961417-15961535)
chr6 (49-167)||(28668111-28668229)
chr6 (69-177)||(343593-343702)
chr6 (49-154)||(12157386-12157491)
chr6 (49-177)||(12680195-12680323)
chr6 (49-146)||(17919568-17919665)
chr6 (90-177)||(14036620-14036708)
chr6 (48-167)||(1954892-1955010)
chr6 (90-177)||(19175828-19175915)
chr6 (37-160)||(16118164-16118287)
chr6 (48-160)||(10929505-10929618)
chr6 (49-140)||(10458802-10458893)
chr6 (38-177)||(11431638-11431779)
chr6 (69-177)||(5270392-5270502)
chr6 (40-156)||(28221614-28221730)
chr6 (90-139)||(3673184-3673233)
chr6 (49-122)||(5250195-5250268)
chr6 (69-154)||(2396227-2396313)
chr6 (35-122)||(8844164-8844252)
chr6 (49-121)||(9878525-9878596)
[»] scaffold0047 (1 HSPs)
scaffold0047 (39-177)||(58582-58721)
[»] chr2 (52 HSPs)
chr2 (39-177)||(30783334-30783473)
chr2 (49-177)||(41637614-41637743)
chr2 (39-177)||(31266350-31266489)
chr2 (49-177)||(29749413-29749542)
chr2 (38-173)||(27327616-27327752)
chr2 (49-177)||(32300447-32300576)
chr2 (38-177)||(28841341-28841481)
chr2 (49-172)||(28319589-28319713)
chr2 (49-177)||(1141532-1141661)
chr2 (49-177)||(15636745-15636874)
chr2 (39-177)||(18551253-18551392)
chr2 (49-167)||(43408521-43408639)
chr2 (49-177)||(8430292-8430421)
chr2 (45-177)||(18916407-18916539)
chr2 (49-177)||(20065084-20065213)
chr2 (49-177)||(22140374-22140503)
chr2 (49-177)||(23388388-23388517)
chr2 (49-177)||(37724002-37724131)
chr2 (49-161)||(37552240-37552352)
chr2 (49-167)||(7093575-7093693)
chr2 (36-177)||(13788052-13788194)
chr2 (49-177)||(32008948-32009078)
chr2 (49-177)||(21293721-21293850)
chr2 (49-177)||(32185828-32185957)
chr2 (49-177)||(41736168-41736297)
chr2 (49-161)||(12779613-12779725)
chr2 (49-161)||(13613103-13613215)
chr2 (49-167)||(44476385-44476503)
chr2 (49-177)||(14757131-14757260)
chr2 (50-177)||(26687701-26687830)
chr2 (49-177)||(28262360-28262489)
chr2 (99-177)||(27523007-27523086)
chr2 (49-175)||(44722930-44723057)
chr2 (49-167)||(26243331-26243449)
chr2 (56-154)||(35697475-35697573)
chr2 (48-177)||(44366006-44366136)
chr2 (49-161)||(23857968-23858079)
chr2 (35-161)||(36550849-36550974)
chr2 (39-177)||(37802379-37802517)
chr2 (49-159)||(38362281-38362391)
chr2 (49-134)||(27039918-27040003)
chr2 (38-177)||(18609510-18609650)
chr2 (65-177)||(40018798-40018911)
chr2 (38-177)||(2556091-2556231)
chr2 (69-161)||(31966555-31966646)
chr2 (51-161)||(8763647-8763757)
chr2 (113-177)||(29998633-29998698)
chr2 (38-177)||(36373896-36374034)
chr2 (90-177)||(9004359-9004447)
chr2 (131-177)||(22192188-22192235)
chr2 (130-177)||(27058407-27058455)
chr2 (49-121)||(22192232-22192304)
[»] chr5 (57 HSPs)
chr5 (38-167)||(25397787-25397916)
chr5 (49-177)||(33818571-33818700)
chr5 (38-177)||(23423755-23423895)
chr5 (38-177)||(618294-618434)
chr5 (49-177)||(16121849-16121978)
chr5 (39-177)||(27428012-27428151)
chr5 (49-167)||(746878-746996)
chr5 (49-177)||(17039641-17039770)
chr5 (49-177)||(23975635-23975764)
chr5 (38-173)||(35620343-35620478)
chr5 (67-177)||(33816786-33816897)
chr5 (49-173)||(2472724-2472849)
chr5 (49-177)||(8108870-8108999)
chr5 (49-177)||(8886861-8886990)
chr5 (49-177)||(36196394-36196523)
chr5 (49-167)||(38837681-38837799)
chr5 (49-177)||(12045727-12045856)
chr5 (49-177)||(12328236-12328365)
chr5 (49-177)||(15060973-15061102)
chr5 (38-177)||(25673228-25673367)
chr5 (49-167)||(10494748-10494866)
chr5 (49-167)||(36597350-36597468)
chr5 (49-177)||(7888797-7888926)
chr5 (49-177)||(13620137-13620266)
chr5 (49-177)||(36831900-36832029)
chr5 (53-161)||(26708599-26708707)
chr5 (53-161)||(26978333-26978441)
chr5 (49-177)||(7003740-7003867)
chr5 (49-167)||(16631884-16632002)
chr5 (49-167)||(17771978-17772096)
chr5 (48-154)||(33734982-33735088)
chr5 (49-167)||(40484055-40484173)
chr5 (49-177)||(17986729-17986858)
chr5 (49-177)||(20959508-20959637)
chr5 (49-173)||(28265485-28265610)
chr5 (37-161)||(24138839-24138963)
chr5 (39-174)||(25652583-25652719)
chr5 (36-159)||(10420249-10420372)
chr5 (49-167)||(4125198-4125316)
chr5 (49-177)||(23408980-23409110)
chr5 (49-177)||(36716210-36716339)
chr5 (43-177)||(3080700-3080835)
chr5 (39-177)||(11927786-11927925)
chr5 (36-159)||(17036409-17036532)
chr5 (49-173)||(5982649-5982775)
chr5 (49-177)||(13974088-13974217)
chr5 (45-177)||(32726732-32726865)
chr5 (79-177)||(17079405-17079504)
chr5 (39-177)||(20187941-20188080)
chr5 (49-167)||(35778152-35778270)
chr5 (82-159)||(31853131-31853208)
chr5 (38-161)||(23974575-23974698)
chr5 (69-167)||(9024224-9024323)
chr5 (49-177)||(16472191-16472320)
chr5 (121-167)||(16464689-16464735)
chr5 (121-177)||(29727928-29727985)
chr5 (116-159)||(22649406-22649449)
[»] scaffold0069 (1 HSPs)
scaffold0069 (48-177)||(10158-10288)
[»] chr1 (75 HSPs)
chr1 (49-177)||(14760867-14760996)
chr1 (49-177)||(50845340-50845469)
chr1 (49-177)||(12720809-12720938)
chr1 (39-177)||(7830031-7830170)
chr1 (39-177)||(13102316-13102455)
chr1 (49-177)||(6459217-6459346)
chr1 (49-177)||(9109985-9110114)
chr1 (49-177)||(45839292-45839421)
chr1 (36-177)||(18894897-18895039)
chr1 (49-177)||(41752433-41752562)
chr1 (48-177)||(16913586-16913716)
chr1 (49-177)||(6412063-6412192)
chr1 (49-177)||(9464103-9464232)
chr1 (49-177)||(20408170-20408299)
chr1 (49-177)||(52183678-52183807)
chr1 (38-161)||(4340424-4340547)
chr1 (49-167)||(19865255-19865373)
chr1 (49-167)||(28229465-28229583)
chr1 (64-177)||(41071860-41071974)
chr1 (49-167)||(46790011-46790129)
chr1 (49-177)||(22158802-22158931)
chr1 (49-177)||(22603548-22603677)
chr1 (49-177)||(29549418-29549547)
chr1 (49-177)||(38531180-38531309)
chr1 (39-167)||(13308820-13308948)
chr1 (39-177)||(17661050-17661189)
chr1 (49-177)||(9985337-9985466)
chr1 (49-177)||(12161814-12161943)
chr1 (49-177)||(15243085-15243214)
chr1 (49-177)||(18890559-18890688)
chr1 (49-177)||(23457897-23458026)
chr1 (49-158)||(46339455-46339564)
chr1 (49-173)||(51973428-51973553)
chr1 (49-161)||(41120747-41120859)
chr1 (39-177)||(12989852-12989991)
chr1 (39-177)||(19081728-19081867)
chr1 (39-177)||(19129616-19129755)
chr1 (55-177)||(22789607-22789730)
chr1 (49-164)||(50092308-50092423)
chr1 (36-177)||(7181552-7181694)
chr1 (49-177)||(48522518-48522647)
chr1 (49-161)||(46785968-46786080)
chr1 (81-175)||(12174808-12174903)
chr1 (80-177)||(13523002-13523100)
chr1 (49-147)||(25788007-25788105)
chr1 (49-177)||(9259193-9259322)
chr1 (49-177)||(17200020-17200149)
chr1 (49-177)||(41063197-41063326)
chr1 (79-167)||(41358998-41359087)
chr1 (49-167)||(8941004-8941122)
chr1 (48-177)||(30928387-30928517)
chr1 (101-177)||(12370003-12370080)
chr1 (49-177)||(46865243-46865372)
chr1 (48-177)||(17733962-17734093)
chr1 (38-159)||(11917805-11917925)
chr1 (69-177)||(32046876-32046985)
chr1 (49-161)||(9177117-9177229)
chr1 (39-167)||(12806836-12806966)
chr1 (49-177)||(18787923-18788049)
chr1 (49-159)||(26825259-26825369)
chr1 (49-139)||(27253865-27253955)
chr1 (49-177)||(20290331-20290459)
chr1 (39-167)||(49881055-49881182)
chr1 (53-174)||(13195586-13195708)
chr1 (39-161)||(39748950-39749072)
chr1 (48-161)||(45918913-45919026)
chr1 (39-159)||(20580928-20581049)
chr1 (48-177)||(16258495-16258625)
chr1 (49-146)||(6775919-6776015)
chr1 (105-177)||(14486698-14486771)
chr1 (69-167)||(9882070-9882165)
chr1 (80-177)||(52621154-52621252)
chr1 (87-161)||(30673511-30673585)
chr1 (81-177)||(29093596-29093693)
chr1 (114-156)||(25687355-25687397)
[»] scaffold0717 (1 HSPs)
scaffold0717 (49-177)||(928-1058)
[»] scaffold0599 (1 HSPs)
scaffold0599 (49-177)||(7505-7634)
[»] scaffold0219 (1 HSPs)
scaffold0219 (49-177)||(19603-19732)
[»] scaffold0108 (1 HSPs)
scaffold0108 (49-177)||(12653-12781)
[»] scaffold0576 (1 HSPs)
scaffold0576 (49-177)||(9239-9368)
[»] scaffold0087 (1 HSPs)
scaffold0087 (49-177)||(37797-37926)
[»] scaffold0076 (1 HSPs)
scaffold0076 (49-177)||(26483-26612)
[»] scaffold0001 (3 HSPs)
scaffold0001 (49-177)||(8120-8249)
scaffold0001 (49-177)||(21852-21981)
scaffold0001 (49-177)||(84303-84432)
[»] scaffold0502 (1 HSPs)
scaffold0502 (39-177)||(10892-11031)
[»] scaffold0603 (1 HSPs)
scaffold0603 (49-177)||(5989-6118)
[»] scaffold0007 (3 HSPs)
scaffold0007 (49-173)||(3746-3871)
scaffold0007 (49-177)||(202774-202903)
scaffold0007 (112-177)||(276207-276273)
[»] scaffold0240 (1 HSPs)
scaffold0240 (49-161)||(15000-15112)
[»] scaffold0006 (2 HSPs)
scaffold0006 (49-167)||(84684-84802)
scaffold0006 (39-175)||(120987-121124)
[»] scaffold0009 (3 HSPs)
scaffold0009 (49-177)||(219636-219765)
scaffold0009 (49-167)||(182541-182659)
scaffold0009 (39-167)||(215663-215784)
[»] scaffold0128 (1 HSPs)
scaffold0128 (49-161)||(10673-10785)
[»] scaffold0014 (1 HSPs)
scaffold0014 (49-161)||(22228-22340)
[»] scaffold0019 (1 HSPs)
scaffold0019 (39-177)||(173444-173584)
[»] scaffold0655 (1 HSPs)
scaffold0655 (49-174)||(3172-3296)
[»] scaffold0062 (1 HSPs)
scaffold0062 (49-177)||(43917-44046)
[»] scaffold0023 (1 HSPs)
scaffold0023 (49-177)||(39713-39842)
[»] scaffold0035 (1 HSPs)
scaffold0035 (53-177)||(74731-74857)
[»] scaffold0161 (1 HSPs)
scaffold0161 (49-177)||(6795-6924)
[»] scaffold0284 (1 HSPs)
scaffold0284 (69-167)||(1549-1647)
[»] scaffold0184 (1 HSPs)
scaffold0184 (49-173)||(7460-7585)
[»] scaffold0002 (1 HSPs)
scaffold0002 (49-167)||(439974-440092)
[»] scaffold0114 (1 HSPs)
scaffold0114 (69-167)||(36313-36411)
[»] scaffold0011 (1 HSPs)
scaffold0011 (49-127)||(17627-17705)
[»] scaffold0211 (1 HSPs)
scaffold0211 (79-167)||(19178-19266)
[»] scaffold0038 (1 HSPs)
scaffold0038 (40-156)||(22112-22228)
[»] scaffold0024 (1 HSPs)
scaffold0024 (108-159)||(112347-112398)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 5e-78; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 200 - 355
Target Start/End: Complemental strand, 55642959 - 55642804
Alignment:
Q  200 caaccaacgattatgcataatataaataggcatagaataaagaacttatttagccaaaatcactctacctaatctacttgatagtctaccttttcaagct 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  55642959 caaccaacgattatgcataatataaataggcatagaataaagaacttatttagccaaaatcactctacctaatctacttaatagtctaccttttcaagct 55642860  T
Q  300 tccagtctcgatttgatcttatcaaagatataggaaaaatttgtgttggtaaccct 355  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55642859 tccagtctcgatttgatcttatctaagatataggaaaaatttgtgttggtaaccct 55642804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 33914196 - 33914057
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33914196 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattagag 33914097  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  33914096 agggatttcatgtttttcctcactaaatttccctcactaa 33914057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 177
Target Start/End: Complemental strand, 25147852 - 25147719
Alignment:
Q  45 taagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggat 144  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25147852 taagaaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggat 25147753  T
Q  145 ttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||| ||||||||||||||||    
T  25147752 ttcatgttttccctcactaaatttccctcactaa 25147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 5399746 - 5399607
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  5399746 cactactaggaaaagcaaacttagggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattagag 5399647  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  5399646 agggatttcatgttttccctcactaaatttccctcactaa 5399607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 9058952 - 9059080
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||    
T  9058952 cactactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagag 9059051  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    ||||||||||||||||||||||| |||||    
T  9059052 agggatttcatgttttccctcaccaattt 9059080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 22168395 - 22168266
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  22168395 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattccttggtcgcaaaatttagtgccggaattagagaggaatttca 22168296  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  22168295 tgttttccctcactaaatatccctcactaa 22168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 1638584 - 1638445
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||| |||||||||||||||||||| ||| ||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||| |    
T  1638584 cactactaggaaaaacaaaattagggagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacggaattaggg 1638485  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||| ||||||||||||||||||| |||||| |||||||||    
T  1638484 aggaatttcatgttttccctcactaaattttcctcactaa 1638445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 27040035 - 27040164
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| | ||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  27040035 aaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 27040134  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  27040135 cgttttccctcacaaaatttccctcactaa 27040164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 32175747 - 32175876
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  32175747 aaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 32175846  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  32175847 cgttttccctcactaaatttccctcactaa 32175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 37378633 - 37378762
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| |||||  || ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37378633 aaaagcaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 37378732  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  37378733 tgttttccctcacaaaatttccctcactaa 37378762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 46286239 - 46286368
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| ||||||| ||||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  46286239 aaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 46286338  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  46286339 cgttttccctcacaaaatttccctcactaa 46286368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 2275694 - 2275817
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  2275694 aaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggatttcatgtttt 2275793  T
Q  155 ccctcac-aaatttccctcactaa 177  Q
    ||||||| |||| |||||||||||    
T  2275794 ccctcactaaatatccctcactaa 2275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 38619974 - 38619856
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  38619974 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcataaattctttggtcgtaaaatttagtgacggaattagagagggatttta 38619875  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  38619874 cgttttccctcactaattt 38619856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 55309222 - 55309352
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| |||||||||| ||| ||||||| | | |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  55309222 aaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttt 55309321  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | |||||||||||| ||||||||||||||||    
T  55309322 acgttttccctcactaaatttccctcactaa 55309352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 8879010 - 8878881
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| || |||||||||| ||| ||||||| |||||||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  8879010 aaaagcaaaatcagagagggaaattagtgacggaaaaaataaaatctctcagaaattcgttggtcgcaaaatttagtgacagaattagagagggatttca 8878911  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||||| |||||||    
T  8878910 tgttttccctcactaaatttccgtcactaa 8878881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 22128322 - 22128451
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||||| ||||||||||||| ||| ||||||| |||||||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  22128322 aaaaacaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaattagagagggatttca 22128421  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  22128422 cgttttccctcactaaatttccctcactaa 22128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 38645877 - 38645759
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |    
T  38645877 aaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggagttagagagggatttta 38645778  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  38645777 cgttttccctcactaattt 38645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 18051966 - 18051837
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||    |||||||||||||||||||||||||||||||||||||||    
T  18051966 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatttca 18051867  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  18051866 cgttttccctcacaaaatttccctcactaa 18051837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 19839306 - 19839177
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  19839306 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 19839207  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||| ||||    
T  19839206 cgttttccctcactaaattttcctcgctaa 19839177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 12106119 - 12105992
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  ||||| |||||||| ||||||||||  ||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  12106119 cactattagaaaaagtaaaattagcgagggaaattattgatggaaaaaataaaatttctcataaattctttggtcgcaaa-tttagtgacggaattagag 12106021  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    |||| |||||||||||||||||| |||||    
T  12106020 aggggtttcatgttttccctcactaattt 12105992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 45532578 - 45532718
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||  |||||||||| ||| ||||||| || |||||||||| |||||  ||| |||||||||||| |||||||||||||    
T  45532578 acactattagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattaga 45532677  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  45532678 gagggattttacgttttccctcactaaatttccctcactaa 45532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 9670489 - 9670607
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |    
T  9670489 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttta 9670588  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  9670589 cgttttccctcactaattt 9670607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 29625452 - 29625334
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||    
T  29625452 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttagtgacggaattagagagggatttca 29625353  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  29625352 cgttttccctcactaattt 29625334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 30508114 - 30507996
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| |||| |||| || |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  30508114 aaaagcaaaattagcgaggaaaatctgtgacgaaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 30508015  T
Q  149 tgttttccctcacaaattt 167  Q
      ||||||||||| |||||    
T  30508014 cattttccctcactaattt 30507996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 5473976 - 5473847
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||| ||| || ||||||||||  ||||| |||||||||||||||||||||||||||| |||||||||| |    
T  5473976 aaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattcctcaccaattccttggtcgcaaaatttagtgacggaattaaagagggatttta 5473877  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  5473876 cgttttccctcactaaattttcctcactaa 5473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 9238625 - 9238750
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  |||||||||||||||||||||||||||||||    
T  9238625 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagag 9238724  T
Q  139 agggatttcatgttttccctcacaaa 164  Q
    ||  |||| | |||||||||||||||    
T  9238725 agaaattttacgttttccctcacaaa 9238750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 12072101 - 12071960
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||||||  |||||||||||||| ||| |||||| |||   ||||| || |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  12072101 tacactattagaaaaagcaaaattagcgagcgaaattagtgatcgaaaaaatgaaattcttcataaattccttgatcgcaaaatttagtgacggaattag 12072002  T
Q  137 agagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| ||||||||| |||| |||| |||||||||||    
T  12072001 agagggattttatgttttccttcactaaatatccctcactaa 12071960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 36689804 - 36689675
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||  |||||||||| |||  |||||| || ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36689804 aaaaacaaaattaacgagggaaattagtgatggaaaaaatgaaatttctcataaattttttggtcgcaaaatttagtgacggaattagagagggatttca 36689705  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||| ||| ||||||||||| ||||    
T  36689704 cgttttcccacactaaatttccctcgctaa 36689675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 4586768 - 4586880
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||| |    
T  4586768 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgtaaaatttagtgacggaattagagagggatttta 4586867  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  4586868 cgttttccctcac 4586880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 24682337 - 24682464
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||||||||||||||  || ||||||| ||||||||||||| ||||||  ||||||||||||||||||  ||||||||||||||||||||    
T  24682337 aaaagaaaaattagggagggaaattaatgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtggtggaattagagagggatttca 24682436  T
Q  149 tgttttccctcacaaatttccctcactaa 177  Q
     |||||||||  | |||||||||||||||    
T  24682437 cgttttccctttc-aatttccctcactaa 24682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 13564925 - 13565054
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||  || |||||| ||| |||||| ||||||  |||||||||||||||||||||||||| |||| |    
T  13564925 aaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattagagaggaatttta 13565024  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  13565025 cgttttccctcactaaatttccctcactaa 13565054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 19680434 - 19680559
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| ||||||| || ||| ||||||| || |||||||||| |||||   |||||||||||||||||||||||||||||||||||||| |    
T  19680434 aaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttta 19680533  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
     |||||||||||| ||||||||||||    
T  19680534 cgttttccctcacaaaatttccctca 19680559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 30268998 - 30269127
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||  ||| ||||||| || |||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |    
T  30268998 aaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattagagagagatttta 30269097  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||| | ||||||||||||||||    
T  30269098 cattttccctcgctaaatttccctcactaa 30269127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 30283191 - 30283062
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||  ||| ||||||| || |||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |    
T  30283191 aaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattagagagagatttta 30283092  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||| | ||||||||||||||||    
T  30283091 cattttccctcgctaaatttccctcactaa 30283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 22156652 - 22156740
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  22156652 aaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 22156740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 38223631 - 38223511
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    ||||||||||||||| ||| ||| ||||||| ||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||||   |||||    
T  38223631 aaaattagggagggagattagtgacggaaaaaataaaattccttacaaattccttggtcgcaaaatttagtgacagaattagagagggattttgcgtttt 38223532  T
Q  155 ccctcac-aaatttccctcac 174  Q
    ||||| | |||||||||||||    
T  38223531 ccctctctaaatttccctcac 38223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 44783610 - 44783502
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag-agagggatttc 147  Q
    |||||||||| ||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||||    
T  44783610 aaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagaagagggatttc 44783511  T
Q  148 atgttttcc 156  Q
    |||||||||    
T  44783510 atgttttcc 44783502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 25026695 - 25026572
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  ||||| |||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| || |||||||||||||||||||||||||||    
T  25026695 acactattagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttagtcgcaaaatttagtgacggaattaga 25026596  T
Q  138 gagggatttcatgttttccctcac 161  Q
    ||| ||||| | ||||||||||||    
T  25026595 gagagattttacgttttccctcac 25026572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 7111956 - 7112074
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  ||||||| |||||||||||||||||||| |||||||||| |    
T  7111956 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgaaaaatttagtgacggaattatagagggatttta 7112055  T
Q  149 tgttttccctcacaaattt 167  Q
      ||||||||||| |||||    
T  7112056 cattttccctcactaattt 7112074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 18715029 - 18714932
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    |||||||| ||||| |||||||||  ||| ||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  18715029 aaaagcaatattagcgagggaaataagtgacggaaaaaataaaattcctcacaaattccttggtctcaaaatttagtgacggaattagagagggattt 18714932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 30568009 - 30568138
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| ||| |||||| ||| ||||||| || |||||||||| ||||||| |||||| |||||||| |||||||||||||||| ||||| |    
T  30568009 aaaaacaaaattagcgagcgaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgacggaattagagagagatttta 30568108  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||||| |||||||    
T  30568109 cgttttccctcacaaaatttccttcactaa 30568138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 9239297 - 9239409
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||  |||||||||| ||| ||||||| || ||||| |||| |||||| |||||||||||||| | |||||||||||||||||||||||| |||||    
T  9239297 aaaattaacgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaattgaatgacggaattagagagggatttcacgtttt 9239396  T
Q  155 ccctcacaaattt 167  Q
    ||||||| |||||    
T  9239397 ccctcactaattt 9239409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 13028826 - 13028938
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||| |||| |||| ||||| ||| ||||||| ||  ||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  13028826 aaaagcaaacttagcgaggaaaattagtgacggaaaaaatgcaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 13028925  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  13028926 cgttttccctcac 13028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 313694 - 313603
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctca 160  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||    
T  313694 aaattagtgacggaaaaaataaaatccctcataaattctttggtcgcaaaatttagtaacataattagagagggatttcatgttatccctca 313603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 4606828 - 4606957
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||| || |||||||   ||| |||||  |||| |||||||||||||||||||||||||    
T  4606828 acactactaggaaaagtaaaattagggagggaaattagtgacggacaaaataaaatctgtcacaaatttcttggccgcaaaatttagtgacggaattaga 4606927  T
Q  138 gagggatttcatgttttccctcacaaattt 167  Q
    ||| |||||||  ||||||||||| |||||    
T  4606928 gagtgatttcactttttccctcactaattt 4606957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 16915496 - 16915367
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||||||| ||||| |||  |||||| |||||||  |||| |||||  |||||||||||||||||||||  |||||||||| |||||||    
T  16915496 aaaagcaaaatcagggaggaaaattagtgatggaaaaaataaaatctctcacaaatttgttggtcgcaaaatttagtgacaaaattagagagagatttca 16915397  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    | ||||||||||| |||||||| |||||||    
T  16915396 tattttccctcactaaatttccgtcactaa 16915367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 9913379 - 9913275
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    ||||||||||||| ||||| ||| ||||||| || |||| ||||| || ||  ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9913379 aaaattagggaggaaaattagtgacggaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagagggatttcacgtttt 9913280  T
Q  155 ccctc 159  Q
    |||||    
T  9913279 ccctc 9913275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 6553911 - 6553813
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| ||||||| |||||||||||  |||||||||||||||||| ||  |||||||||||||||||||||| |||||||| |||||    
T  6553911 aaattagtgacggaaaaaataaaatccctcataaatttcttggtcgcaaaatttagtaacataattagagagggatttcatgttatccctcactaattt 6553813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 14944853 - 14944755
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| || |||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  14944853 aaattagtgacgtaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaattt 14944755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 42055524 - 42055406
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||| |||| || |||| || |||||||||| |||||| |||||||||||||||||| |||||||||| ||| ||||| |    
T  42055524 aaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtaacggaattagtgagtgatttta 42055425  T
Q  149 tgttttccctcacaaattt 167  Q
      |||| |||||| |||||    
T  42055424 catttttcctcactaattt 42055406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 18744100 - 18744209
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaattt 167  Q
    ||||| ||| ||||||| || ||||| |||| |||||   |||||  ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  18744100 aaattagtgacggaaaaaatgaaatttctcacaaatttcatggtcataaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18744199  T
Q  168 ccctcactaa 177  Q
    ||||||||||    
T  18744200 ccctcactaa 18744209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 54539413 - 54539301
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||| ||||| ||| ||||||| || |||||||||| |||||| || ||||||||||||||||||| ||||| |||| ||||| |    
T  54539413 aaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacgcaattaaagagtgatttta 54539314  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  54539313 cgttttccctcac 54539301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 39235068 - 39234940
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaa-cataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||| |||||||||||||||||| ||||  ||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||  |||||||||  ||||||    
T  39235068 aaaaccaaaattagggagggaaacttgtaacggaaaaacataaaatttctcacaaattttttggtcgcaaaatttagtaacaaaattagaga--gatttc 39234971  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | ||||||| || | ||||||||||||||||    
T  39234970 acgttttccttctctaaatttccctcactaa 39234940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 29238551 - 29238429
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||| ||||| ||||||||||||||  || ||||||| |||||||  |||| ||||||||||||  |||||||||||||| |||||||| || |||||     
T  29238551 gaaaaacaaaactagggagggaaattattgacggaaaaaataaaatctctcacaaattctttggtttcaaaatttagtgacagaattagatagagatttt 29238452  T
Q  148 atgttttccctcac-aaatttcc 169  Q
    ||||||| |||||| ||||||||    
T  29238451 atgtttttcctcactaaatttcc 29238429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 30420043 - 30420149
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||| ||||| ||| ||||||| ||||||||| | | |||||  ||||||| |  ||||||||||| ||||||||||| ||||||    
T  30420043 aaaagcaaaattagggaggaaaattagtgacggaaaaaataaaattcattacaaattacttggtcgaagcatttagtgacgaaattagagaggaatttca 30420142  T
Q  149 tgttttc 155  Q
    |||||||    
T  30420143 tgttttc 30420149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 37761912 - 37761977
Alignment:
Q  109 tggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctca 173  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  37761912 tggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattttcctca 37761977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 4627088 - 4627200
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||||| |||||  ||| ||| |||||||||||||| |||||||||| ||||| |    
T  4627088 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaatttcttgatcgtaaaatttagtgacgaaattagagagagatttta 4627187  T
Q  149 tgttttccctcac 161  Q
      |||||||||||    
T  4627188 cattttccctcac 4627200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 3613133 - 3613012
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtc-ggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||||||  |||||||||||||||||||||| || ||| |   |||| ||||| | ||||| |||||| ||||||||||| |||||||||| |||||||    
T  3613133 cactattagaaaaagcaaaattagggagggaatttggtggctaaaaaaaataaattccctcacaaattccttggtcgcaaattttagtgacgaaattaga 3613034  T
Q  138 gagggatttcatgttttccctc 159  Q
    |||| |||||| ||||| ||||    
T  3613033 gaggaatttcacgtttttcctc 3613012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 23104442 - 23104362
Alignment:
Q  82 aaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaa 163  Q
    |||| ||||||||| ||| ||||||| |||||||||||||||| |||   ||||||||||||||||||| ||||||||||||    
T  23104442 aaaaaataaaattcatcacaaattctatggtcgcaaaatttagggacatgattagagagggatttcatg-tttccctcacaa 23104362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 45091338 - 45091289
Alignment:
Q  112 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac 161  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  45091338 tcgcaaaatttagtgacggaattagagaaggattttacgttttccctcac 45091289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 25225224 - 25225127
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||||||||   || ||||||| |||||||  ||   |||||||||| |||||||||||| | || |||||||||||||||||||    
T  25225224 aaaagaaaaattagggagggaaatcaatgacggaaaatataaaat--ctgtcaaattctttgatcgcaaaatttaataacagaattagagagggatttca 25225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 34557304 - 34557224
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| |||| ||||| ||| ||||||| ||||||| | ||| |||||| |||||| ||||||||| |||||||||||    
T  34557304 aaaattagtgaggaaaattagtgacggaaaaaataaaatccttcacaaattccttggtcacaaaatttaatgacggaatta 34557224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 4e-57; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 39979623 - 39979763
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  39979623 acactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttaatgacggaattaga 39979722  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  39979723 gagggatttcatgttttccctcactaaatttccctcactaa 39979763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 40847433 - 40847574
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  40847433 tacactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattag 40847532  T
Q  137 agagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  40847533 agagggatttcatgttttccctcactaaatttccctcactaa 40847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 56 - 177
Target Start/End: Complemental strand, 36636628 - 36636506
Alignment:
Q  56 aaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttc 155  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36636628 aaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttc 36636529  T
Q  156 cctcac-aaatttccctcactaa 177  Q
    |||||| |||||| |||||||||    
T  36636528 cctcactaaatttgcctcactaa 36636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 4514905 - 4514776
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  4514905 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcacaaattctttggtcgcaaaatttagtgaaggaattaga 4514806  T
Q  138 gagggatttcatgttttccctcacaaattt 167  Q
    |||||||||||| ||||||||||| |||||    
T  4514805 gagggatttcatattttccctcactaattt 4514776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 1824199 - 1824328
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  1824199 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 1824298  T
Q  138 gagggatttcatgttttccctcacaaattt 167  Q
    |||| ||||||| ||||||||||| |||||    
T  1824299 gaggaatttcatattttccctcactaattt 1824328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 35 - 167
Target Start/End: Complemental strand, 26577408 - 26577276
Alignment:
Q  35 tttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatt 134  Q
    ||||||||| |  |||||||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||    
T  26577408 tttacactactgggaaaagcaaaattaggaagggaaacttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtatt 26577309  T
Q  135 agagagggatttcatgttttccctcacaaattt 167  Q
    ||||||||||||||||||||||||||| |||||    
T  26577308 agagagggatttcatgttttccctcactaattt 26577276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 23232168 - 23232039
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23232168 aaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagaaagggatttca 23232069  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  23232068 tgttttccctcactaaatatccctcactaa 23232039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 31425511 - 31425650
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31425511 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctgtggtcgcaaaatttagtgacggaattagag 31425610  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||| | |||||||||||| ||||||||||||||||    
T  31425611 agggattttacgttttccctcactaaatttccctcactaa 31425650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 47523666 - 47523789
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47523666 aaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 47523765  T
Q  155 ccctcac-aaatttccctcactaa 177  Q
    ||||||| |||| |||||||||||    
T  47523766 ccctcactaaatatccctcactaa 47523789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 15014402 - 15014544
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  ||||| |||||||| |||||||||| ||| ||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||    
T  15014402 ttacactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgacggaatta 15014501  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  15014502 gagagggatttcatgttttccctcactaaatatccctcactaa 15014544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 22486523 - 22486394
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  22486523 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 22486424  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||||| |||| ||||||||||||||||    
T  22486423 cgttttccgtcactaaatttccctcactaa 22486394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 1907494 - 1907355
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||||||||||||| |||||||||| ||| ||||||| ||||||| ||||| | ||||||||||||||||||||||||||| ||||||||    
T  1907494 cactactaggaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacgaaattagag 1907395  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| | |||| |||||||||    
T  1907394 agggatttcatgttttccctcactagattttcctcactaa 1907355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 20174150 - 20174020
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||||||||||||||||||||||||||||||||||||    
T  20174150 gaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttc 20174051  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | |||||||||||| ||||||||||||||||    
T  20174050 acgttttccctcacaaaatttccctcactaa 20174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 24140580 - 24140450
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||| ||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||| |||||||| |||||||||| |||| ||||||     
T  24140580 gaaaagtaaaattagggaggaaaatttgtgacggaaaatataaaattcctcacaaattctttggtcgtaaaatttaatgacggaattggagaaggatttt 24140481  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||| ||||||||||||||||    
T  24140480 atgttttccctcactaaatttccctcactaa 24140450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 21917344 - 21917473
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  21917344 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 21917443  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||| |||||||||||    
T  21917444 cgttttccctcactaaatgtccctcactaa 21917473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 27806147 - 27806018
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  27806147 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagagggatttca 27806048  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  27806047 tgttttccctcactaaatatccctcactaa 27806018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 28801007 - 28800878
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| | ||||| || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  28801007 aaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttca 28800908  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  28800907 tgttttccctcactaaatatccctcactaa 28800878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 37135295 - 37135424
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  37135295 aaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcataaattccatggtcgtaaaatttagtgacggaattagagagggatttca 37135394  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  37135395 cgttttccctcacaaaatttccctcactaa 37135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 2457798 - 2457670
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||||||||||||| ||| | ||||| |||||||  |||| ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  2457798 gaaaagcaaaattagggagggaaattagtgacagaaaatataaaat--ctcacaaattcttttgtcgcaaaatttagtgacggaatttgagagggatttc 2457701  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||| |||||| |||||||||    
T  2457700 atgttttccctcacaaaattttcctcactaa 2457670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 7733322 - 7733451
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||| ||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  7733322 aaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagagacggaattagagagggatttca 7733421  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    |||||| |||||| |||| |||||||||||    
T  7733422 tgttttacctcactaaatatccctcactaa 7733451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 11036636 - 11036507
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  11036636 aaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 11036537  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  11036536 cgttttccctcacaaaatttccctcactaa 11036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 18217958 - 18217829
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||| |||||||||||||||| |    
T  18217958 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaattagagagggatttta 18217859  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||||| ||||||||||||||||    
T  18217858 cgtttttcctcactaaatttccctcactaa 18217829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 24605967 - 24605838
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || |||||||||| ||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24605967 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagagatttca 24605868  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  24605867 cgttttccctcactaaattttcctcactaa 24605838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 48933276 - 48933136
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||| ||||| ||| ||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  48933276 acactattagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattaga 48933177  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||| |||||| |||||  ||||| ||||||||||||||||    
T  48933176 gaggaatttcacgttttttctcacaaaatttccctcactaa 48933136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 36993959 - 36993820
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||  || |||| ||||||||||||||||||||||     
T  36993959 cactactaggaaaagcaaaattagggagggaaatttgtgatggaaaatataaaattcctcacaaatttcttagtcgtaaaatttagtgacggaattagaa 36993860  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    || ||||||||||||| |||||| |||||||| |||||||    
T  36993859 agagatttcatgtttttcctcactaaatttccttcactaa 36993820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 1843023 - 1842898
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| |    
T  1843023 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagggagggatttta 1842924  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
     |||||||||||| ||||||||||||    
T  1842923 cgttttccctcactaaatttccctca 1842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 23577199 - 23577328
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || ||| |||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  23577199 aaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagatagggatttca 23577298  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  23577299 cgttttccctcactaaatttccctcactaa 23577328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 3872197 - 3872315
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||| |    
T  3872197 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtctcaaaatttagtgacggaattagagagagatttta 3872296  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  3872297 cgttttccctcactaattt 3872315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 3904488 - 3904606
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||  |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  3904488 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 3904587  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  3904588 cgttttccctcactaattt 3904606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 11852137 - 11852027
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||||||| |||||||||| | ||||| |||||||  |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  11852137 aaaagcaaaattagggagagaaatttgtgacagaaaaaataaaatgtctcacaaattctttggtcacaaaatttagtgacggaattagagaaggatttca 11852038  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  11852037 ggttttccctc 11852027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 816201 - 816330
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||| ||||||||||||||| ||| ||||||| | |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  816201 aaaaacaaatttagggagggaaattagtgacggaaaaaacaaaatctctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttca 816300  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||||| || | |||||| |||||||||    
T  816301 cgttttccatctctaaattttcctcactaa 816330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 20429594 - 20429465
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||   ||||||||| ||| ||||||| || |||||||||| |||||   |||||| |||||||||||||||||||||||||||||||||    
T  20429594 aaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgtaaaatttagtgacggaattagagagggatttca 20429495  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  20429494 cgttttccctcacaaaatttccctcactaa 20429465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 23750746 - 23750875
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  23750746 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagagagggatttta 23750845  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  23750846 cattttccctcactaaatttccctcactaa 23750875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 6849221 - 6849350
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| |||| || || |||||||||| |||||| || |||||||||||||||||||||||||||||| ||||| |    
T  6849221 aaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagagagatttta 6849320  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||||| ||||||||||| ||||    
T  6849321 cgttttacctcactaaatttccctcgctaa 6849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9698548 - 9698677
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||  || |||||| ||| |||||| ||||||  |||||||||||||||||||||||||| |||| |    
T  9698548 aaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattagagaggaatttta 9698647  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9698648 cgttttccctcactaaatttccctcactaa 9698677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 10050866 - 10050975
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaattt 167  Q
    ||||| ||| ||||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  10050866 aaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 10050965  T
Q  168 ccctcactaa 177  Q
    ||||||||||    
T  10050966 ccctcactaa 10050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 27305000 - 27304872
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||| |||||||||||||||||||| ||| | ||||| ||||||| || || |||||| |||| |||||||||||||||||||||||||||||||| ||    
T  27305000 gaaaaacaaaattagggagggaaattagtgacagaaaaaataaaatcccccacaaattccttggccgcaaaatttagtgacggaattagagagggatgtc 27304901  T
Q  148 atgttttccctcacaaatttccctcactaa 177  Q
    | | ||||| |||||||||||||| |||||    
T  27304900 acg-tttccttcacaaatttccctgactaa 27304872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 23539361 - 23539249
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||  | ||||||||||||| ||||||||||||||||||||||||    
T  23539361 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttaatgacggaattagagagggatttca 23539262  T
Q  149 tgttttccctcac 161  Q
     || |||||||||    
T  23539261 cgtattccctcac 23539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 33427818 - 33427707
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| |  |||| || |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  33427818 aaaaacaaaattagcgagggaaattagtgaccaaaaa-atgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagaggaatttca 33427720  T
Q  149 tgttttccctcac 161  Q
    |||||||||||||    
T  33427719 tgttttccctcac 33427707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 20923968 - 20924097
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||| ||||||||||| |||  |||||| |||||||  || | |||||  |||||| |||||||||||||| |||||||||||||||||||    
T  20923968 aaaagtaaaattatggagggaaattagtgatggaaaaaataaaatctcttacaaatttgttggtcacaaaatttagtgacagaattagagagggatttca 20924067  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||||| |||||||    
T  20924068 tgttttccctcactaaatttccatcactaa 20924097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 22501719 - 22501594
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtt 152  Q
    ||||||||| ||| | ||||| ||| ||||||| |||||||   ||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  22501719 gcaaaattaaggatgaaaattagtgacggaaaaaataaaatctttcacaaattctttggccgcaaaatttaatgacggaattagagagggatttcacgtt 22501620  T
Q  153 ttccctcac-aaatttccctcactaa 177  Q
    ||||||| | ||||||||||||||||    
T  22501619 ttccctctctaaatttccctcactaa 22501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 23699835 - 23699964
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||||||||||||||||| |||||| ||||||||||||    
T  23699835 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattaaagagggatttca 23699934  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||| ||||||||    
T  23699935 cattttccctcacaaaatttctctcactaa 23699964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 38057761 - 38057636
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| |  |||| ||||| |||  |||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  38057761 aaaagcaaaatcaacgaggaaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaagtttagtgacggaattaaagagggatttca 38057662  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
     |||||||||| | ||||||||||||    
T  38057661 cgttttccctcgctaaatttccctca 38057636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 21623149 - 21623038
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| || |||||||||| ||| ||||||| || |||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| |    
T  21623149 aaaagcaaaat-agcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgggcgcaaaatttagtgatggaattagagagggatttta 21623051  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  21623050 cgttttccctcac 21623038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 42926435 - 42926559
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttt 153  Q
    |||||||| |||| ||||| ||| ||||||| | | |||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  42926435 aaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttagtcgcaaaatttagtgacggaattagagagggatttcatgttt 42926534  T
Q  154 tccctcac-aaatttccctcactaa 177  Q
    | |||||| |||| |||||||||||    
T  42926535 ttcctcactaaatatccctcactaa 42926559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 2650838 - 2650949
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| ||||||| || ||| ||||||| || |||||||||| |||||   |||||||||||||||||||||||||||||||||||||| |    
T  2650838 aaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttta 2650937  T
Q  149 tgttttccctca 160  Q
     |||||||||||    
T  2650938 cgttttccctca 2650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 31042374 - 31042251
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||| ||||| ||   |||||| |||||||| |||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  31042374 aaaattagagaggaaaattagttatggaaaaaataaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagagggatttcacgtttt 31042275  T
Q  155 ccctcac-aaatttccctcactaa 177  Q
    ||||| | ||| ||||||||||||    
T  31042274 ccctctctaaaattccctcactaa 31042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 11890177 - 11890286
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaattt 167  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||| | |||| ||||||| |||| ||||||||||| ||||||    
T  11890177 aaattagtgacggaaaaaataaaatccctcataaattctttggtctcaaaatttagtgacgaagttagcgagggatatcatattttccctcactaaattt 11890276  T
Q  168 ccctcactaa 177  Q
     |||||||||    
T  11890277 tcctcactaa 11890286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 14786630 - 14786755
Alignment:
Q  34 ttttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaat 133  Q
    |||||||||||||  |||| ||||||||| |||| ||||| ||| | ||||| || |||||||||| ||||| |||||||||||||||||||||||||||    
T  14786630 ttttacactattagaaaaaacaaaattagtgaggaaaattagtgacagaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaat 14786729  T
Q  134 tagagagggatttcatgttttccctc 159  Q
    || | ||| |||| | ||||||||||    
T  14786730 taaaaaggaattttacgttttccctc 14786755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 15969914 - 15969801
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||| |||||||  |||||| ||| ||| ||||||| | | ||||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||    
T  15969914 aaaagtaaaattaatgagggatattagtgacggaaaaaaatgaaatttctcacaaattctttggtcgtaaaatttagtgacggaattagagaggaatttc 15969815  T
Q  148 atgttttccctcac 161  Q
    ||||||||||||||    
T  15969814 atgttttccctcac 15969801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 45664865 - 45664768
Alignment:
Q  81 gaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||| || |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  45664865 gaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggattttacgttttccctcactatatttccctcactaa 45664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 32267471 - 32267350
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtt 152  Q
    ||||||||||||||||| ||| ||| ||||||| ||||||| ||||| |||||  ||| ||||||||||||||||| |||||||||||||||||   |||    
T  32267471 gcaaaattagggagggagattagtgacggaaaa-ataaaatccctcacaaatttcttgatcgcaaaatttagtgacagaattagagagggattttgcgtt 32267373  T
Q  153 ttccctcac-aaatttccctcac 174  Q
    ||||||| | |||||||||||||    
T  32267372 ttccctctctaaatttccctcac 32267350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 1821996 - 1822121
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||   |||| ||| ||||||| ||||||||||||| |||||| | | ||  |||||||| ||| ||||||||||    
T  1821996 cactactatgaaaagcaaaattagggag---aattagtgacggaaaatataaaattcctcacaaattcctcgatcttaaaatttactgaaggaattagag 1822092  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    || ||||||||||||| |||||| |||||    
T  1822093 agagatttcatgtttttcctcactaattt 1822121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 2093372 - 2093490
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || |||||||||| ||| ||||||| || |||||||||| |||   |||| ||| ||||||||||||||||||||||||| ||||| |    
T  2093372 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaaaaatttgatcgaaaaatttagtgacggaattagagagagatttga 2093471  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  2093472 cgttttccctcactaattt 2093490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 21871697 - 21871607
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagaga 139  Q
    |||| ||||||||| |||| ||||  ||| ||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  21871697 aaaaacaaaattagcgaggaaaatcagtggcggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagaga 21871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 26415553 - 26415424
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| || ||||||| |||  |||||| |||||||| |||| ||||| |||| ||| |||||||||||||| ||||| |||||||||| |    
T  26415553 aaaagtaaaattagagaaggaaattagtgatggaaaaaataaaatttctcacaaattttttgatcgtaaaatttagtgacgaaattaaagagggatttta 26415454  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||| | ||| ||||||||||||    
T  26415453 cgtttttcctctctaaaattccctcactaa 26415424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 10222648 - 10222745
Alignment:
Q  57 aattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttc 155  Q
    ||||||||||| ||||| ||| | |||||  ||||||| |||||||||| |||| |||||||||||| |||| ||||||||||||||||| | ||||||    
T  10222648 aattagggaggaaaattagtgacagaaaaagtaaaatttctcataaatt-tttgatcgcaaaatttaatgacagaattagagagggattttacgttttc 10222745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 27132731 - 27132860
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||  ||||||| ||||||| | ||| |||||  || || ||||||||||||||| |||||||||||  |||||     
T  27132731 aaaagtaaaattagagagggaaattggtaacggaaaaaataaaatccatcacaaatttgtttgttgcaaaatttagtgacagaattagagagatatttcg 27132830  T
Q  149 tgttttccctcaca-aatttccctcactaa 177  Q
     ||||| |||| || |||||||||||||||    
T  27132831 cgtttttcctctcacaatttccctcactaa 27132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 25777128 - 25777247
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    ||||||||||| | ||||| ||| |  | || ||||||| ||||| ||||| |||| ||| |||||||||||| | |||||||||| ||||||| |||||    
T  25777128 aaaattagggaagaaaattagtgaccaataaaataaaatccctcacaaattttttgatcgtaaaatttagtgatgaaattagagagtgatttcacgtttt 25777227  T
Q  155 ccctcac-aaatttccctca 173  Q
    ||||| | ||||||||||||    
T  25777228 ccctctctaaatttccctca 25777247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 1841792 - 1841889
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    |||||||||||||||| || |||||| || |  ||||| ||||||| ||||| |||||| ||| | |||||||||| ||| ||||||||||||||||||    
T  1841792 gaaaagcaaaattaggaagagaaattagt-taagaaaaaataaaatccctcacaaattccttgattgcaaaatttactgaaggaattagagagggattt 1841889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 27130461 - 27130338
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||| | ||| |||||  |||  |||||| ||||||| ||||| |||||| ||  |||||||| ||||||||||||||  ||||||||||||    
T  27130461 aaaagcaaaattcgagagagaaatcagtgatggaaaatataaaatgcctcacaaattcgttaatcgcaaaagttagtgacggaatt--agagggatttca 27130364  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
      ||||||||| | ||||||||||||    
T  27130363 cattttccctctctaaatttccctca 27130338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 38090402 - 38090336
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaatt 105  Q
    ||||| || ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  38090402 cactactaggaatagcaaaattagggagggaaatttgtgacggaaaaaataaaatccctcacaaatt 38090336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 687954 - 687877
Alignment:
Q  101 aaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||| || |||||||| ||||||||| |||||||||| |||||| |  ||||||||||| ||||||| ||||||||    
T  687954 aaattcctttgtcgcaaagtttagtgacagaattagagaaggattttacattttccctcactaaatttctctcactaa 687877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 15330256 - 15330320
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    ||||| |||| |||||  ||||||||||||||||||||| |||||||||||  |||||| |||||    
T  15330256 aaatttctcacaaatttcttggtcgcaaaatttagtgacagaattagagagaaatttcaagtttt 15330320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 148
Target Start/End: Original strand, 5235420 - 5235449
Alignment:
Q  119 atttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||||||||||||||    
T  5235420 atttagtgacggaattagagagggatttca 5235449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 30219474 - 30219334
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30219474 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattaga 30219375  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  30219374 gagggatttcatgtttttcctcactaaatttccctcactaa 30219334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 19610473 - 19610335
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  19610473 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 19610374  T
Q  139 agggatttcatgttttccctcac-aaatttccctcacta 176  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19610373 agggatttcatgttttccctcactaaatttccctcacta 19610335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 16299996 - 16299857
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  16299996 cactactaggaaaagcaaaattagggagcgaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 16299897  T
Q  139 agggatttcatgttttccctca-caaatttccctcactaa 177  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  16299896 agggatttcatgttttccctcaccaaatttccctcactaa 16299857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 15063991 - 15064120
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  15063991 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 15064090  T
Q  138 gagggatttcatgttttccctcacaaattt 167  Q
    ||| |||||||||||||||||||| |||||    
T  15064091 gagagatttcatgttttccctcactaattt 15064120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 29216127 - 29215988
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  29216127 cactactaggaaaagcaaaattatggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagag 29216028  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  29216027 agggatttcatgttttccctcactaaatttccctcactaa 29215988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 50665636 - 50665764
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| |||||||||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  50665636 cactactaagaaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttgatcgcaaaatttagtgacgaaattagag 50665735  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    ||||||||||||||||||||||| |||||    
T  50665736 agggatttcatgttttccctcactaattt 50665764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 25882706 - 25882566
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  25882706 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattaga 25882607  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  25882606 gagggatttcatgttttccctcactaaatatccctcactaa 25882566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 27449213 - 27449084
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  27449213 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttta 27449114  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  27449113 cgttttccctcactaaatttccctcactaa 27449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 5744551 - 5744423
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||    
T  5744551 cactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagag 5744452  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    || |||||||||||||||||||| |||||    
T  5744451 agagatttcatgttttccctcactaattt 5744423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 5781510 - 5781382
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||    
T  5781510 cactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagag 5781411  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    || |||||||||||||||||||| |||||    
T  5781410 agagatttcatgttttccctcactaattt 5781382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 18091547 - 18091686
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  18091547 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagag 18091646  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||| |||||||||||||| |||| |||||||||||    
T  18091647 agggattttatgttttccctcactaaatatccctcactaa 18091686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 49915586 - 49915447
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||||||||| |||||||  |||||||||||||| ||||||||||||||| ||| | |||||  || ||||||||||||||||||||||||||||    
T  49915586 cactactaagaaaagtaaaattaaagagggaaatttgtgacggaaaacataaaatccctaacaaatttcttagtcgcaaaatttagtgacggaattagag 49915487  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49915486 agggatttcatgttttccctcactaaatttccctcactaa 49915447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 11915883 - 11915754
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |    
T  11915883 aaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 11915784  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  11915783 cgttttccctcactaaatttccctcactaa 11915754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 18104540 - 18104669
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18104540 aaaagcaaaattagcgagggaaattattgacggaaaaaattaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 18104639  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  18104640 tgttttccctcacaaaatttccctcactaa 18104669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 37283658 - 37283549
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||  |||||||||||||||||||||||    
T  37283658 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcataaaatttagtgacggaattagag 37283559  T
Q  139 agggatttca 148  Q
    ||||||||||    
T  37283558 agggatttca 37283549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 19269863 - 19270003
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||| |    
T  19269863 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaa 19269962  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  19269963 gagggattttacgttttccctcactaaatttccctcactaa 19270003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 26098938 - 26098820
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| |||  |||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  26098938 aaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 26098839  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  26098838 tgttttccctcactaattt 26098820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 5261062 - 5260933
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  5261062 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 5260963  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| | ||||||||||||||    
T  5260962 cgttttccctcactatatttccctcactaa 5260933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 18539929 - 18539800
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  18539929 aaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaaaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 18539830  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  18539829 cgttttccctcacaaaatttccctcactaa 18539800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 19223574 - 19223445
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  19223574 aaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagagggatttta 19223475  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||| ||| ||||||||||||||||    
T  19223474 cgttttcccccactaaatttccctcactaa 19223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 26390644 - 26390773
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||| |||||| ||| ||||||| || |||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  26390644 aaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagggatttca 26390743  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    |||| |||||||| |||| |||||||||||    
T  26390744 tgttatccctcacaaaatatccctcactaa 26390773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 36543874 - 36543745
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||| ||||| |||  |||||| |||||||  |||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  36543874 aaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatctctcacagattctttggtcgcaaaatttagtgacgaaattagagagggatttca 36543775  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  36543774 tgttttccctcacaaaatttccctcactaa 36543745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 17762762 - 17762638
Alignment:
Q  54 caaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttt 153  Q
    ||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  17762762 caaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagcgatttcatgttt 17762663  T
Q  154 tccctcac-aaatttccctcactaa 177  Q
    |||||||| |||| |||||||||||    
T  17762662 tccctcactaaatatccctcactaa 17762638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 19064082 - 19063958
Alignment:
Q  54 caaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttt 153  Q
    ||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  19064082 caaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagcgatttcatgttt 19063983  T
Q  154 tccctcac-aaatttccctcactaa 177  Q
    |||||||| |||| |||||||||||    
T  19063982 tccctcactaaatatccctcactaa 19063958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 48404985 - 48404873
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  48404985 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 48404886  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  48404885 cgttttccctcac 48404873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 8428290 - 8428167
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  8428290 aaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagagagatttcatgtttt 8428191  T
Q  155 ccctcac-aaatttccctcactaa 177  Q
    ||||||| |||| |||||||||||    
T  8428190 ccctcactaaatatccctcactaa 8428167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 10941675 - 10941786
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||    
T  10941675 aaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagagggatttca 10941774  T
Q  149 tgttttccctca 160  Q
    ||||||||||||    
T  10941775 tgttttccctca 10941786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 21020200 - 21020061
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||||||||| ||| ||||||| |||||||  |||| |||||| ||||| |||||||||||||||||||||||||    
T  21020200 cactactaggaaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggttgcaaaatttagtgacggaattagag 21020101  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    | |||||| |||||||||||||| ||| | ||||||||||    
T  21020100 aaggattttatgttttccctcactaaactgccctcactaa 21020061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 1628340 - 1628211
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||||||||||||||  ||  |||||| |||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||    
T  1628340 aaaagtaaaattagggagggaaattaatgatggaaaaaataaaattcctcataaattccttagtcgtaaaatttagtgacgaaattagagagggatttca 1628241  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||| | ||||||||||||||||    
T  1628240 cgttttccctctctaaatttccctcactaa 1628211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 4393360 - 4393489
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||    |||||||||||||||||||||||||||||||||||||||    
T  4393360 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatttca 4393459  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  4393460 cgttttccctcacaaaatttccctcactaa 4393489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 7623541 - 7623670
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || |||||||||| ||| ||||||| || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  7623541 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaatttctcacagattctttggtcgcaaaatttagtgacggaattagagagggatttca 7623640  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  7623641 cattttccctcacaaaatttccctcactaa 7623670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 8110464 - 8110335
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||| |||||||| ||||||||||||||||| |||| |    
T  8110464 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcggaaaatttaatgacggaattagagaggaatttta 8110365  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  8110364 cgttttccctcactaaatttccctcactaa 8110335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9652703 - 9652574
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||| | |||||||||| ||| ||||||| || |||||||||| |||||   | ||||||||||||||||||||||||||||||||||||||    
T  9652703 aaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattagagagggatttca 9652604  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9652603 cgttttccctcacaaaatttccctcactaa 9652574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 11007693 - 11007822
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||| ||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  11007693 aaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcgtcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 11007792  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  11007793 cgttttccctcactaaatttccctcactaa 11007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 13921463 - 13921338
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||    
T  13921463 ttacactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 13921364  T
Q  136 gagagggatttcatgttttccctcac 161  Q
    ||||||||||| | ||||||||||||    
T  13921363 gagagggattttacgttttccctcac 13921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 17582331 - 17582440
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaattt 167  Q
    ||||| ||| ||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  17582331 aaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 17582430  T
Q  168 ccctcactaa 177  Q
    ||||||||||    
T  17582431 ccctcactaa 17582440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 21088887 - 21088765
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||| ||||||||||||| ||||||||||||||| ||| ||||||| |||||||  |||| |||||| |||||||||||||||  |||||||||| |    
T  21088887 tacactactaagaaaagcaaagttagggagggaaattagtgacggaaaaaataaaat--ctcacaaattccttggtcgcaaaatttgatgacggaattcg 21088790  T
Q  137 agagggatttcatgttttccctcac 161  Q
    |||||||||||||||||||||||||    
T  21088789 agagggatttcatgttttccctcac 21088765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 29704042 - 29704171
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||| | || |||||||||||||||||||||||| ||||||||||||    
T  29704042 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttatgatcgcaaaatttagtgacggaattaaagagggatttca 29704141  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||| ||||| ||||||||||||||||    
T  29704142 cgttttctctcacaaaatttccctcactaa 29704171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 1745488 - 1745615
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  1745488 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaa-atgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 1745586  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    || ||||| | |||||||||||| |||||    
T  1745587 agagattttacgttttccctcactaattt 1745615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 11837224 - 11837336
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| |||  |||||| || |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  11837224 aaaaacaaaattagcgagggaaattcgtgatggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagaggaatttca 11837323  T
Q  149 tgttttccctcac 161  Q
    |||||||||||||    
T  11837324 tgttttccctcac 11837336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 13905048 - 13905166
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||| |||||| ||| ||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  13905048 aaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 13905147  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  13905148 cgttttccctcactaattt 13905166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 11085352 - 11085481
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| ||| |||||  ||  ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11085352 aaaagtaaaattagcgagagaaatcagtaacggaaaaaatgaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 11085451  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
       |||||||||| ||||||| ||||||||    
T  11085452 caatttccctcactaaatttctctcactaa 11085481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 28390098 - 28389969
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || |||| ||||| ||| ||||||| |||||||  |||| |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  28390098 aaaagtaaaatcagagaggaaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagaaggatttca 28389999  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  28389998 cgttttccctcactaaatttccctcactaa 28389969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 36564449 - 36564578
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||| ||||| |||  |||||| ||||||| ||| | | |||||||||||||| |||||||||||| ||||||||||||||||||    
T  36564449 aaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatccctgacagattctttggtcgcagaatttagtgacgaaattagagagggatttca 36564548  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    || |||||||||| ||||||||||||||||    
T  36564549 tgctttccctcacaaaatttccctcactaa 36564578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 176
Target Start/End: Original strand, 1310969 - 1311097
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||| ||||| ||| ||||||| || ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  1310969 aaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaaatcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 1311068  T
Q  149 tgttttccctcac-aaatttccctcacta 176  Q
     ||||||| |||| |||||||||||||||    
T  1311069 cgttttccatcactaaatttccctcacta 1311097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 21816846 - 21816734
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |    
T  21816846 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttta 21816747  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  21816746 cgttttccctcac 21816734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 23217208 - 23217328
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||| |||||||||||||||||||  ||  |||||| || |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  23217208 cactactaaaaaaagaaaaattagggagggaaattaatgagggaaaaaatcaaattcctcacaaattctatggtcccaaaatttagtgacggaattagag 23217307  T
Q  139 agggatttcatgttttccctc 159  Q
    |||||||||| ||||||||||    
T  23217308 agggatttcacgttttccctc 23217328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 26830441 - 26830581
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||||||  ||||| ||||||||||||| |||||  || ||||||| | |||||||||||| ||||||  |||||||||||||| ||||||||||||||    
T  26830441 cactattagaaaaagaaaaattagggaggaaaattaatgacggaaaaaaataaaattcctcacaaattccatggtcgcaaaattttgtgacggaattaga 26830540  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||| |||||||||| | ||||||||||||||||    
T  26830541 gagggatttcacgttttccctctctaaatttccctcactaa 26830581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 5565847 - 5565729
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||  |||| |||||  |||||||||||||||||||||  ||||||||||||||||||    
T  5565847 aaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttcttggtcgcaaaatttagtgacataattagagagggatttca 5565748  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  5565747 cgttttccctcactaattt 5565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 17269614 - 17269732
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || |||||||   |  |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  17269614 aaaagcaaaattagcgatggaaattaacgatggaaaaaataaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagagagggatttca 17269713  T
Q  149 tgttttccctcacaaattt 167  Q
    | |||| |||||| |||||    
T  17269714 tatttttcctcactaattt 17269732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 23773602 - 23773484
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||||||||  ||||||||| ||| ||||| | || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  23773602 aaaaacaaaattagtaagggaaattagtgacggaagaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 23773503  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  23773502 cgttttccctcactaattt 23773484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 29236179 - 29236057
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| ||| |  |||||||||||||||||||||||||||||||    
T  29236179 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaaattcttggtcgcaaaatttagtgacggaattagag 29236080  T
Q  139 agggatttcatgttttccctcac 161  Q
    |||||||| | ||||||||||||    
T  29236079 agggattttacgttttccctcac 29236057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 43329773 - 43329891
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||| |||||||||||||||||||||||| |||||| |    
T  43329773 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagaaggatttta 43329872  T
Q  149 tgttttccctcacaaattt 167  Q
      ||||||||||| |||||    
T  43329873 cattttccctcactaattt 43329891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 46012738 - 46012856
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||||||| ||||| ||| ||||||| |||||||  |||| |||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  46012738 aaaagcaaaatcagggaggaaaattagtgacggaaaaaataaaatctctcacaaattccttgatcgcaaaatttagtgacaaaattagagagggatttca 46012837  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  46012838 tgttttccctcactaattt 46012856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 11219263 - 11219134
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || ||||| |||| ||||||  | ||||||||||||| ||||||||||||||||||||||||    
T  11219263 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatagtcgcaaaatttaatgacggaattagagagggatttca 11219164  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  11219163 cgttttccctcacaaaattttcctcactaa 11219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 19545615 - 19545506
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaattt 167  Q
    ||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||    
T  19545615 aaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgtttttcctcactaaattt 19545516  T
Q  168 ccctcactaa 177  Q
    ||||||||||    
T  19545515 ccctcactaa 19545506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 29956497 - 29956372
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| |||  |||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  29956497 aaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaaagggatttca 29956398  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
      ||||||||||| ||||||||||||    
T  29956397 cattttccctcacaaaatttccctca 29956372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 30005652 - 30005527
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| |||  |||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  30005652 aaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaaagggatttca 30005553  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
      ||||||||||| ||||||||||||    
T  30005552 cattttccctcacaaaatttccctca 30005527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 3461320 - 3461438
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| | ||||| ||||||||||||| |||||  ||| |||||||||||| |||||||||||||||||||||| |    
T  3461320 aaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattagagagggatttta 3461419  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  3461420 cgttttccctcactaattt 3461438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 31250209 - 31250087
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtt 152  Q
    ||||||||||||||| | ||| ||| ||||||| ||||||||||| | |||||  ||||||||||||||||||||| |||||||||||||||||  ||||    
T  31250209 gcaaaattagggaggaagattagtgacggaaaaaataaaattccttacaaatttcttggtcgcaaaatttagtgacagaattagagagggattttgtgtt 31250110  T
Q  153 ttccctcac-aaatttccctcac 174  Q
    ||||||| | |||||||||||||    
T  31250109 ttccctctctaaatttccctcac 31250087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 8546370 - 8546265
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||    
T  8546370 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagagagggatttca 8546271  T
Q  149 tgtttt 154  Q
     |||||    
T  8546270 cgtttt 8546265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 27969040 - 27968911
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||||||||||||| ||| ||||| | |||||||  |||| |  ||  |||||||||||||||| |||| |||||||||||||||||||    
T  27969040 aaaagcaaaatcagggagggaaattagtgacggaacaaataaaatctctcacacctttgttggtcgcaaaatttaatgacagaattagagagggatttca 27968941  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||||| |||||||    
T  27968940 tgttttccctcactaaatttccgtcactaa 27968911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 8543603 - 8543465
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||| ||||||||| |||||||||| |||  |||||| || |||||||| | || ||   ||||||||||||||| ||||||||||||||    
T  8543603 cactattagaaaaaacaaaattagcgagggaaattagtgatggaaaa-atgaaattcctaacaagtttcatggtcgcaaaatttaatgacggaattagag 8543505  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  8543504 agggatttcacgttttccctcacaaaatttccctcactaa 8543465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 20088492 - 20088398
Alignment:
Q  82 aaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcact 175  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||| ||||||    
T  20088492 aaaaaataaaatttctcataaattctttggtcacaaaatttagtgatggaattagagaaggatttcatgttttgcctcactaaatttctctcact 20088398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 28859710 - 28859604
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| | |||||    
T  28859710 aaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagagggattttacgtttt 28859611  T
Q  155 ccctcac 161  Q
     ||||||    
T  28859610 acctcac 28859604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 27212823 - 27212920
Alignment:
Q  81 gaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||| ||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||||    
T  27212823 gaaaaaataaaatccctcacaaattctttagtcgcaaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaatttccctcactaa 27212920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 27182656 - 27182793
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||| || ||||| |||||||||||||||||||| ||| |  |||| ||||||| ||||| |||| | |||||| ||| ||||||||||| ||||||    
T  27182656 tacactactaggaaaaacaaaattagggagggaaattagtgac--aaaaaataaaatccctcacaaatcccttggtcacaagatttagtgacgaaattag 27182753  T
Q  137 agagggatttcatgttttccctcac-aaatttccctcact 175  Q
    |||| |||||| ||||||||||||| ||||||| ||||||    
T  27182754 agagagatttcttgttttccctcactaaatttctctcact 27182793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 6718815 - 6718720
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaa 164  Q
    ||||| ||| ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  6718815 aaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagaaagggatttcacgttttccctcacaaa 6718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 15490169 - 15490031
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||||||||| ||||||  ||||| ||| || |||| |||||||  |||| ||||| ||||||||||||||||||||||  ||||| ||    
T  15490169 cactactaaaaaaagcaaaatcagggagaaaaattagtgacgaaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgac-aaattaaag 15490071  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| |||||| ||||| ||||||||||||||||    
T  15490070 agggatttcacgttttctctcactaaatttccctcactaa 15490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 31433872 - 31433753
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||| ||||||||  ||||||||| |||   ||||| |||||||| |||| |||||| ||||||| |||||||||||||||||||||||    
T  31433872 cactactaaaaaaagtaaaattagatagggaaattagtgatagaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagag 31433773  T
Q  139 agggatttcatgttttccct 158  Q
    ||| |||||| |||||||||    
T  31433772 aggaatttcacgttttccct 31433753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 6088238 - 6088356
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||  ||||||||| ||| ||||||| || |||||||||| |||||| |||||| ||||||||| | ||||||||||||| |||||| |    
T  6088238 aaaagcaaaataagtaagggaaattagtgacggaaaaaatgaaattcctcagaaattccttggtcacaaaatttaataacggaattagagatggatttta 6088337  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  6088338 cgttttccctcactaattt 6088356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 10803846 - 10803716
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||| ||||||||||||||||||  || ||||||| | | |||||||||| |||||  |||||||||||||||| ||||||||||| ||||| ||||     
T  10803846 aaaagccaaattagggagggaaattaatgacggaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttaatgacggaattaaagaggaatttt 10803747  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | |||||||||||| ||||||||||| ||||    
T  10803746 acgttttccctcactaaatttccctcgctaa 10803716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 21490044 - 21490162
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||   || ||||||| || ||||| |||| |||||| ||||||||||||||||||||| ||||||||||||||||| |    
T  21490044 aaaaacaaaattagtgagggaaatcaatgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagagggatttta 21490143  T
Q  149 tgttttccctcacaaattt 167  Q
      ||||||||||| |||||    
T  21490144 cattttccctcactaattt 21490162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 46942612 - 46942502
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||||||||||| ||||||| ||| | ||||| || |||| ||||| || ||  ||||||||||||||||||||| |||||||||||||||||||    
T  46942612 aaaatcaaaattagggaaggaaattagtgacagaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagagggatttca 46942513  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  46942512 cgttttccctc 46942502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 6447245 - 6447344
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||| |||  |||||| ||||||||||||  | ||||||||||| |||| ||||||||| ||||||||    
T  6447245 acactactaggaaaagcaaaattagggagggaaattagtgatggaaaaaataaaattcctcgcagattctttggtctcaaagtttagtgacagaattaga 6447344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 18380149 - 18380020
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||  ||| ||||||| || |||||| ||| |||||  ||| ||| |||||||||||||||||||| |||||||||| |    
T  18380149 aaaagtaaaattagcgagggaaatcagtgacggaaaaaatgaaattcttcacaaatttcttgatcgtaaaatttagtgacggaattaaagagggatttta 18380050  T
Q  149 tgttttccctca-caaatttccctcactaa 177  Q
      ||||||||||  ||||||||||||||||    
T  18380049 cattttccctcattaaatttccctcactaa 18380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 20761960 - 20762045
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatt 134  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||  |||| |||||| ||||||||||||||||||||| |||||    
T  20761960 aaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaatt 20762045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 29451219 - 29451090
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||  |||||||||| ||| ||||||| || ||||| ||||||||||| |  || ||||||||| | ||||||||||||||||||||| |    
T  29451219 aaaaacaaaattaacgagggaaattagtgacggaaaaaatgaaatttctcataaattcctcagttgcaaaattttgggacggaattagagagggatttta 29451120  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||| ||| ||||    
T  29451119 cgttttccctcactaaatttctctcgctaa 29451090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 20615344 - 20615482
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||||||| |||||| ||||||| ||||| ||||| | | ||||||| |||||||  |||| ||||| |||||||| |||||||| |||| ||||||||    
T  20615344 acactatta-gaaaag-aaaattaaggaggaaaattagagacggaaaaaataaaatatctcacaaattttttggtcgtaaaatttaatgacagaattaga 20615441  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||| |||||| ||||||| || | ||||||||||||||||    
T  20615442 gaggaatttcacgttttccttctctaaatttccctcactaa 20615482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 50240851 - 50240753
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| |||||||  ||||||||||| |||| ||||||||||||| ||  |||||||||| ||||||||||| |||||||| |||||    
T  50240851 aaattagtgacggaaaaaataaaatctctcataaattccttggacgcaaaatttagtaacataattagagagagatttcatgttatccctcactaattt 50240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 23233214 - 23233291
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  23233214 aaatttctcacaaatactttggtcgcaaaatttagtgaaggaatttgagaggaatttcacgttttccctcactaattt 23233291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 47263275 - 47263387
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  || ||||||| ||| | ||||| || |||||||||| |||||| ||||||||||||||||||||| || ||||| ||  |||| |    
T  47263275 aaaagcaaaattaacgaaggaaattggtgacagaaaaaattaaattcctcacaaattccttggtcgcaaaatttagtgacagagttagatagaaatttta 47263374  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  47263375 cgttttccctcac 47263387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 10772106 - 10772176
Alignment:
Q  91 aattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac 161  Q
    ||||| ||| ||||| ||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  10772106 aattcttcacaaattttttagtcgcaaaatttaatgacgaaattagagagggatttcatattttccctcac 10772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 27711236 - 27711285
Alignment:
Q  107 tttggtcgcaaaatttagtgacggaattagagagggatttcatgttttcc 156  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  27711236 tttggtcgcaaaatttagtgacggaattagagagaaatttcatgttttcc 27711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 26963259 - 26963384
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||  |||||||||| ||| || |||| || |||||  | | |||| ||||||| | |||||||||| ||||||||||||||| |||| |    
T  26963259 aaaaacaaaattaacgagggaaattagtgacgtaaaaaatgaaattttttacaaatactttggttgtaaaatttagtaacggaattagagaggaatttta 26963358  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
      ||||||||||| ||||||||||||    
T  26963359 cattttccctcactaaatttccctca 26963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 35579605 - 35579647
Alignment:
Q  119 atttagtgacggaattagagagggatttcatgttttccctcac 161  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  35579605 atttagtgacggaattagagagggattttacgttttccctcac 35579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 13615551 - 13615433
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  ||||||||||||||| | | ||| | ||| ||||| | ||||||  ||||| |||||  ||   ||||||||||||||| | |||||||    
T  13615551 acactattagaaaaagcaaaattaggaaagaaaaatagtgacggaagaaataaaacccctcacaaatttcttaaccgcaaaatttagtgatgaaattaga 13615452  T
Q  138 gagggatttcatgttttcc 156  Q
    |||| |||||| |||||||    
T  13615451 gaggaatttcacgttttcc 13615433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 23233182 - 23233219
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaattt 74  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  23233182 tacactattagaaaaagcaaaattagggagggaaattt 23233219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 45304458 - 45304374
Alignment:
Q  50 aaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatt 134  Q
    |||||||||| | |||| ||||||  || ||||||| ||||||||||| | || |||||| ||  ||||||||| ||||||||||    
T  45304458 aaagcaaaatcaaggagagaaattaatgacggaaaaaataaaattcctaacaatttctttagttacaaaatttaatgacggaatt 45304374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 74538 - 74680
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| || |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  74538 ttacactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttggtcgcaaaatttagtgacggaatta 74637  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  74638 gagagggatttcatgttttccctcactaaatttccctcactaa 74680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 17824626 - 17824755
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17824626 aaaagcaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttca 17824725  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  17824726 tgttttccctcactaaatttccctcactaa 17824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 17103875 - 17104004
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17103875 aaaaacaaaattagagagagaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttca 17103974  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  17103975 tgttttccctcactaaatttccctcactaa 17104004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 8555314 - 8555443
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |    
T  8555314 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagagatttta 8555413  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  8555414 tgttttccctcactaaatttccctcactaa 8555443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 3823271 - 3823131
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  3823271 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattctttggtcgcaaaatttagtgacggaattaga 3823172  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  3823171 gagggattttacgttttccctcactaaatttccctcactaa 3823131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 10917954 - 10917836
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||| ||    
T  10917954 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttgattgcaaaatttagtgacggaattagagagggattgca 10917855  T
Q  149 tgttttccctcacaaattt 167  Q
    |||||| |||||| |||||    
T  10917854 tgtttttcctcactaattt 10917836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 18844540 - 18844683
Alignment:
Q  35 tttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatt 134  Q
    ||||||||| || |||||||||||||||||| || ||||||||  |||||||||||||||||||| ||||| ||||||||||||||||| | ||  ||||    
T  18844540 tttacactactaggaaaagcaaaattagggatggtaatttgtgatggaaaacataaaattcctcacaaattttttggtcgcaaaatttaataacaaaatt 18844639  T
Q  135 agagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||| |||| ||||||||||||||||    
T  18844640 agagagggatttcatgttttccttcactaaatttccctcactaa 18844683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 27869378 - 27869236
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  |||||||||||||| |||||||||| |||  |||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  27869378 ttacactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatta 27869279  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||| |||||||||||||||||||| |||| || ||||||||    
T  27869278 gagagagatttcatgttttccctcactaaatatctctcactaa 27869236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 37992227 - 37992097
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||| | ||| | ||||||| |||||||||||||||||||||||||||||| ||||||    
T  37992227 gaaaagcaaaattagggaggaaaattagtgacggaaaacataaaatccttcacatattctttagtcgcaaaatttagtgacggaattagagagagatttc 37992128  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||| |||||| |||||||||    
T  37992127 atgttttccctcactaaattttcctcactaa 37992097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 4331105 - 4330976
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  4331105 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagaggaatttca 4331006  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  4331005 cgttttccctcacaaaatttccctcactaa 4330976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 19240994 - 19240865
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |    
T  19240994 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttta 19240895  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  19240894 cgttttccctcacaaaatttccctcactaa 19240865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 19314178 - 19314049
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |    
T  19314178 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttta 19314079  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  19314078 cgttttccctcacaaaatttccctcactaa 19314049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 24576034 - 24576163
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24576034 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagagatttca 24576133  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||| | |||| |||||||||||    
T  24576134 tgttttccctcgctaaatatccctcactaa 24576163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 33652694 - 33652565
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  33652694 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggagttagagaaggatttca 33652595  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  33652594 tgttttccctcactaaatatccctcactaa 33652565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 32248036 - 32247918
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32248036 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattagagagggatttca 32247937  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  32247936 cgttttccctcactaattt 32247918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 17810425 - 17810296
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||  |||||||||||||||||||||| ||||||||||||||||||    
T  17810425 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattagagagggatttca 17810326  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  17810325 tgttttccctcactaaatatccctcactaa 17810296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 18010070 - 18010199
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||| |||||| ||| ||||||| || |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  18010070 aaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggatttca 18010169  T
Q  149 tgttttccctc-acaaatttccctcactaa 177  Q
    ||||||||||| | |||| |||||||||||    
T  18010170 tgttttccctcaataaatatccctcactaa 18010199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 24193206 - 24193335
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||||||||||||||||||||||||||||| |||||||    
T  24193206 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagagatttca 24193305  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||| ||||||||    
T  24193306 tgttttccctcacaaaatttctctcactaa 24193335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 27910774 - 27910903
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||    
T  27910774 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagagagggatttca 27910873  T
Q  149 tgttttccctca-caaatttccctcactaa 177  Q
    ||||||||||||  |||| |||||||||||    
T  27910874 tgttttccctcagtaaatatccctcactaa 27910903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 27957193 - 27957322
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||    
T  27957193 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagagagggatttca 27957292  T
Q  149 tgttttccctca-caaatttccctcactaa 177  Q
    ||||||||||||  |||| |||||||||||    
T  27957293 tgttttccctcagtaaatatccctcactaa 27957322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 8789977 - 8789873
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  8789977 cactactaggaaaagcaaaattagggaggaaaatttgtgactgaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 8789878  T
Q  139 aggga 143  Q
    |||||    
T  8789877 aggga 8789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 19488071 - 19488183
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  19488071 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttca 19488170  T
Q  149 tgttttccctcac 161  Q
    | |||||||||||    
T  19488171 tattttccctcac 19488183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 13060941 - 13061059
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||    
T  13060941 aaaagcaaaattagcgaggtaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacagaattagagagggatttca 13061040  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  13061041 tgttttccctcactaattt 13061059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 25655868 - 25655986
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||  |||||||||||||||||||  |||||||||||||||||||    
T  25655868 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgatagaattagagagggatttca 25655967  T
Q  149 tgttttccctcacaaattt 167  Q
     ||||||||||||||||||    
T  25655968 cgttttccctcacaaattt 25655986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 22939440 - 22939311
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| ||||||| || |||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||    
T  22939440 aaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattcctttgtcgcaaaatttagtgacggaattagagagagatttca 22939341  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| || ||||||||    
T  22939340 tgttttccctcactaaatatctctcactaa 22939311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 43431569 - 43431698
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||| |    
T  43431569 aaaagaaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacgaaattagagagggatttta 43431668  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  43431669 cgttttccctcactaaatttccctcactaa 43431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 11938871 - 11938760
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  11938871 aaaagcaaaattagcgagggaaattagtgacggaaaa-atgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 11938773  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  11938772 cgttttccctcac 11938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 19256339 - 19256227
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  19256339 aaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 19256240  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  19256239 cgttttccctcac 19256227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 6816383 - 6816522
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||| |||||| |||||||||| |||  | |||| |||||||| |||| |||||| ||||| ||||||||||||| |||||||||||    
T  6816383 cactactaggaaaagcataattagcgagggaaattagtgatgaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtggcggaattagag 6816482  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  6816483 agggatttcatgttttccctcactaaatatccctcactaa 6816522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 26399028 - 26399135
Alignment:
Q  60 tagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctc 159  Q
    |||||||||||||| ||| ||||||| |||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26399028 tagggagggaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctc 26399127  T
Q  160 acaaattt 167  Q
    || |||||    
T  26399128 actaattt 26399135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 16061949 - 16062078
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  16061949 aaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatgtagtgacggaattagagagtgatttca 16062048  T
Q  149 tgttttccctc-acaaatttccctcactaa 177  Q
     ||||| |||| | ||||||||||||||||    
T  16062049 cgtttttcctcaaaaaatttccctcactaa 16062078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 21350605 - 21350476
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||  ||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| |    
T  21350605 aaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagatggatttta 21350506  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||||| ||||||||||||||||    
T  21350505 cgtttttcctcactaaatttccctcactaa 21350476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 30466964 - 30467076
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| |||||||  ||||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||| |    
T  30466964 aaaagcaaaattagcgagggaaattagtgacggaaaaattaaaattcctcataaatttcttggtcgcaaaatttagtgatggaattagagagagatttta 30467063  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  30467064 cgttttccctcac 30467076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 23752284 - 23752414
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||||||  |||||||||||||| |||||| ||| ||| ||||||| || ||||| |||| |||||| |||||||||||||||||||||||||||||    
T  23752284 tacactattagaaaaagcaaaattagcgagggatattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattag 23752383  T
Q  137 agagggatttcatgttttccctcacaaattt 167  Q
    |||| ||||| |  ||||||||||| |||||    
T  23752384 agagtgattttacattttccctcactaattt 23752414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 29351051 - 29350921
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcg-gaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| |||||||||| ||| |  ||||| || |||||||||| |||||   ||||||||||||||||||||| |||||||||||||||||    
T  29351051 aaaagcaaaattagcgagggaaattagtgactagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgcaattagagagggatttc 29350952  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||| |||| |||||||||||    
T  29350951 atgttttccctcactaaatatccctcactaa 29350921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 4647765 - 4647894
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   | ||||||||||||||||||||||||||||||||||||||    
T  4647765 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattagagagggatttca 4647864  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||| ||||||||    
T  4647865 cattttccctcacaaaatttctctcactaa 4647894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9915051 - 9915179
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||| |||||| ||| ||||||| || |||||||||| ||||||  || ||||||||||||||||| | |||||||||||||||||    
T  9915051 aaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccatg-tcgcaaaatttagtgacaggattagagagggatttca 9915149  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9915150 cgttttccctcacaaaatttccctcactaa 9915179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 32961797 - 32961657
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| ||| |||||||||||||| |||||||||  ||| | ||||| || |||||||||| |||||  ||||||||||| ||||||||||||||||||    
T  32961797 acactactaaaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaagtttagtgacggaattaga 32961698  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||| |||| |  ||||||||||| ||||||||||||||||    
T  32961697 gaggaattttacattttccctcactaaatttccctcactaa 32961657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 25273338 - 25273455
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| || |||| || ||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||| |    
T  25273338 aaaagcaaaattaacgagggaaattagtgacgaaaaa-atgaaagtcctcacaaattctttggtcgcaaaatttagtgacagaattagagagggatttta 25273436  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  25273437 cgttttccctcactaattt 25273455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 161
Target Start/End: Original strand, 5670194 - 5670291
Alignment:
Q  64 gagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac 161  Q
    |||||||||| ||| ||||||| ||  ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  5670194 gagggaaattagtgacggaaaaaatggaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcac 5670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 19493695 - 19493784
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagaggga-tttcatgttttccctcacaaattt 167  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  19493695 cggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttttatgttttccctcactaattt 19493784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 24636776 - 24636667
Alignment:
Q  52 agcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgt 151  Q
    ||||||||||  |||||||||| ||| ||||||| || |||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| | ||    
T  24636776 agcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagagggattttacgt 24636677  T
Q  152 tttccctcac 161  Q
    ||||||||||    
T  24636676 tttccctcac 24636667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 30688063 - 30687966
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    |||||||||||||| |||||||||  ||| | ||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  30688063 aaaagcaaaattagcgagggaaatcagtgaccgaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattt 30687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 21219250 - 21219377
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || ||| |||||| ||| ||||||| || ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21219250 aaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattactcataaattttttggtcgcaaaatttagtgatggaattagagagggatttca 21219349  T
Q  149 tgttttccctcacaaatttccctcactaa 177  Q
     || || ||||  ||||||||||||||||    
T  21219350 cgtatt-cctcgtaaatttccctcactaa 21219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 40289437 - 40289559
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||| ||||| ||| ||||||| || || || |||| |||||| ||||||||||||||||||||||||||||| ||||||||| | |||||    
T  40289437 aaaattagcgaggaaaattagtgacggaaaaaatgaattttctcacaaattccttggtcgcaaaatttagtgacggaattag-gagggattttacgtttt 40289535  T
Q  155 ccctcac-aaatttccctcactaa 177  Q
    ||||||| ||||||||||||||||    
T  40289536 ccctcactaaatttccctcactaa 40289559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 8824952 - 8824834
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| |||  |||||| || |||||||||| | |||| || |||||||||||||||||||||||||||||||||||| |    
T  8824952 aaaagcaaaattagcgagggaaattagtgatggaaaaaatcaaattcctcacagattccttagtcgcaaaatttagtgacggaattagagagggatttta 8824853  T
Q  149 tgttttccctcacaaattt 167  Q
      |||| |||||| |||||    
T  8824852 catttttcctcactaattt 8824834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 15251728 - 15251619
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||  ||||  | || |||||||||||||||||||||| |||||||||| ||||||||    
T  15251728 aaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacgattt-tttggtcgcaaaatttagtgacagaattagagaaggatttca 15251630  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  15251629 cgttttccctc 15251619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 29345198 - 29345072
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||||||   ||| |||||  || || ||||||||||||||||||||||| |||||||||||    
T  29345198 aaaagaaaaattagggagggaaattagtgacggaaaaaataaaatctttcacaaatttcttagtggcaaaatttagtgacggaattagggagggatttca 29345099  T
Q  149 tgttttccctcac-aaatttccctcac 174  Q
     |||||||||| | |||||||||||||    
T  29345098 cgttttccctctctaaatttccctcac 29345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 31399518 - 31399636
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||  |||||||||| |||  | |||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  31399518 aaaaacaaaattaacgagggaaattagtgatgaaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagatggatttca 31399617  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  31399618 cgttttccctcactaattt 31399636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 6817181 - 6817052
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||| ||||  ||| ||||||| || |||||||||| |||||  |||||| |||||||||||||||||||||||||| ||||| |    
T  6817181 aaaagcaaaattagcaaggaaaatcagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagagagagatttta 6817082  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  6817081 cattttccctcactaaatttccctcactaa 6817052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 25000441 - 25000553
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| || |||||| ||||| ||||||||||||||||||||| | |    
T  25000441 aaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcagaattttgtgacggaattagagagggatgtta 25000540  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  25000541 cgttttccctcac 25000553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 5879301 - 5879202
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||| ||||||||||||| |||||  ||||||| |||||||||||||||||||||||||| |||| | ||||| |||||| ||||||||||||||||    
T  5879301 cggaaaaaataaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaggcattttacgtttttcctcactaaatttccctcactaa 5879202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 31344172 - 31344311
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||||||||| |||||||| || ||||||| |||  |||||| || ||||| ||||||||||  ||| |||||||||||| ||||||||||||||    
T  31344172 cactactaagaaaagtaaaattagagaaggaaattagtgatggaaaaaatcaaatttctcataaatttcttgatcgcaaaatttaatgacggaattagag 31344271  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||| ||||||  ||||||||| | ||| ||||||||||||    
T  31344272 aggaatttcacattttccctctctaaaattccctcactaa 31344311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9631531 - 9631401
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgac-ggaattagagagggatttc 147  Q
    ||||||||||||||  ||| ||||| ||| ||||||| ||||||||||||| ||||||| |  ||||||||||||||||| ||||||||||||  |||||    
T  9631531 aaaagcaaaattagcaaggaaaattagtgacggaaaaaataaaattcctcacaaattctatactcgcaaaatttagtgacgggaattagagagaaatttc 9631432  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | ||||||| |||| ||||||||||| ||||    
T  9631431 acgttttccttcacaaaatttccctcgctaa 9631401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 33412992 - 33413097
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||| |||||||||| ||  ||||||| || |||||||||| ||||||      |||||||||||||||||||||||||||||||||| | |||||    
T  33412992 aaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattc------cgcaaaatttagtgacggaattagagagggattttacgtttt 33413085  T
Q  155 ccctcacaaatt 166  Q
    ||||||| ||||    
T  33413086 ccctcactaatt 33413097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 17003402 - 17003279
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  ||||||||||||||||||| ||||| |||| |||||| ||||||  |||||||||||| ||| || ||||||||| |||| | ||||    
T  17003402 ttacactactagaaaaagcaaaattagggaggaaaattagtgtgggaaaaaataaaacccctcataaattccttgatcacaaaatttaatgactgtatta 17003303  T
Q  136 gagagggatttcatgttttccctc 159  Q
    |||||  |||| | ||||||||||    
T  17003302 gagagcaattttacgttttccctc 17003279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 41527730 - 41527828
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| ||||||| |||||||||||| ||| |||||||||||||| ||  |||||| ||| ||||||||||| |||||||| |||||    
T  41527730 aaattagtgacggaaaaaataaaatccctcataaattccttgatcgcaaaatttagtaacataattagggagagatttcatgttatccctcactaattt 41527828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 6084256 - 6084351
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    ||||||||||||||||||  ||||| ||| ||||||| |||||||  |||  |||||| ||||||  ||||||||||||||||||||||||| |||||    
T  6084256 aaaagcaaaattagggagataaattagtgacggaaaaaataaaat--ctcccaaattccttggtctaaaaatttagtgacggaattagagagagattt 6084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 3692214 - 3692310
Alignment:
Q  82 aaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctc-acaaatttccctcactaa 177  Q
    |||| ||||||||||||| ||||||||| |||  |||||||||| | ||||||||||| |||||| | ||||| |||| | ||||||||||||||||    
T  3692214 aaaaaataaaattcctcacaaattctttagtcataaaatttagtaatggaattagagaaggattttacgttttacctctataaatttccctcactaa 3692310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 15289731 - 15289660
Alignment:
Q  87 ataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctca 160  Q
    |||||||  |||| |||||||||||||| |||||||||||| |||||||||||   ||||||||||||||||||    
T  15289731 ataaaatctctcacaaattctttggtcgtaaaatttagtgatggaattagaga--tatttcatgttttccctca 15289660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 15470100 - 15470029
Alignment:
Q  87 ataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctca 160  Q
    |||||||  |||| |||||||||||||| |||||||||||| |||||||||||   ||||||||||||||||||    
T  15470100 ataaaatctctcacaaattctttggtcgtaaaatttagtgatggaattagaga--tatttcatgttttccctca 15470029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 25274724 - 25274654
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaa 119  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| ||||||||||||    
T  25274724 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaa 25274654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 2265388 - 2265474
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||| ||||||||||| | ||||| ||| ||||||| ||||||| | ||| |||||||||| || |||||||||||||| ||||||    
T  2265388 gaaaagtaaaattagggacg-aaattagtgacggaaaaaataaaatccttcacaaattctttgatcacaaaatttagtgacagaatta 2265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 42700667 - 42700743
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagt 125  Q
    ||||| |||||||| |||| ||||  ||| ||||||| || |||||||||| |||||| || |||||||||||||||    
T  42700667 aaaagtaaaattagcgaggaaaatcagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagt 42700743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 14304356 - 14304238
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| |||  |||||| || |||| ||||  |||||   | |||  ||||||||||| | ||| || |||||||||||     
T  14304356 aaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaatccctcgcaaatttcctcgtcataaaatttagtgccagaaataaagagggatttcg 14304257  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  14304256 cgttttccctcactaattt 14304238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 24479874 - 24479915
Alignment:
Q  115 caaaatttagtgacggaattagagagggatttcatgttttcc 156  Q
    |||||||||||||| |||||||||||| |||||| |||||||    
T  24479874 caaaatttagtgacagaattagagaggaatttcacgttttcc 24479915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 9e-55; HSPs: 77)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 22083978 - 22083838
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  22083978 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaattttgtgacggaattaga 22083879  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  22083878 gagggatttcatgttttccctcactaaatttccctcactaa 22083838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 12951847 - 12951708
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||    
T  12951847 cactactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagag 12951748  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  12951747 agggatttcatgttttccctcactaaatttccctcactaa 12951708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 18033526 - 18033664
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  18033526 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaa-cattaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 18033624  T
Q  139 agggatttcatgttttccctca-caaatttccctcactaa 177  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  18033625 agggatttcatgttttccctcattaaatttccctcactaa 18033664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 11077778 - 11077660
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  11077778 aaaagaaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattagagagggatttca 11077679  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  11077678 tgttttccctcactaattt 11077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 11530366 - 11530225
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||  ||| |||||||||||||||||||||    
T  11530366 tacactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcataaatttcttaatcgtaaaatttagtgacggaattag 11530267  T
Q  137 agagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||| ||||||||||||||||||||| |||||| |||||||||    
T  11530266 agatggatttcatgttttccctcactaaattttcctcactaa 11530225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 22579348 - 22579488
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  22579348 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattaga 22579447  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  22579448 gagggatttcacgttttccctcacaaaatttccctcactaa 22579488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 28365053 - 28364911
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  28365053 ttacactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatta 28364954  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||| | |||||||||||| ||||||||||||||||    
T  28364953 gagagggattttacgttttccctcactaaatttccctcactaa 28364911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9893092 - 9892963
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9893092 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 9892993  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9892992 cgttttccctcactaaatttccctcactaa 9892963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 2992754 - 2992615
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||| |||||| |||||||||| |||  |||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  2992754 cactactaggaaaagcataattagcgagggaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 2992655  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  2992654 agggatttcatgttttccctcactaaatatccctcactaa 2992615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 14872249 - 14872130
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||||| |||||  |||||||||||||||||||||||||||||||||    
T  14872249 gaaaagaaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattccttggttccaaaatttagtgacggaattagagagggatttc 14872150  T
Q  148 atgttttccctcacaaattt 167  Q
    |||||||||||||| |||||    
T  14872149 atgttttccctcactaattt 14872130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 6598593 - 6598464
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  6598593 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattacttggtcgcaaaatttagtgacggaattagagagggatttca 6598494  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||| |||||||||||    
T  6598493 agttttccctcactaaatatccctcactaa 6598464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 15364468 - 15364597
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| |    
T  15364468 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaaggatttta 15364567  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  15364568 cgttttccctcactaaatttccctcactaa 15364597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 24661019 - 24661148
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||    
T  24661019 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagagagatttca 24661118  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  24661119 tgttttccctcactaaatatccctcactaa 24661148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 25398131 - 25398002
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  25398131 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 25398032  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  25398031 cgttttccctcactaaatttccctcactaa 25398002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 6978418 - 6978300
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    |||||||||| ||||||||||||||| |||||||||| ||  ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||    
T  6978418 tacactattaggaaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 6978319  T
Q  137 agagggatttcatgttttc 155  Q
    ||||| |||||||||||||    
T  6978318 agaggaatttcatgttttc 6978300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 495637 - 495766
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |    
T  495637 aaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagtgatttta 495736  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  495737 cgttttccctcactaaatttccctcactaa 495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 12200823 - 12200694
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  12200823 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgagggaattagagagggatttca 12200724  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    | ||||||||||| |||| |||||||||||    
T  12200723 tattttccctcactaaatatccctcactaa 12200694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 12845124 - 12845003
Alignment:
Q  57 aattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttcc 156  Q
    ||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  12845124 aattagggagggaaattagtgacggaaaaaataaaattgctcacaaattctttggtcgcaaaatttagtgacggaattagagagagatttcacgttttcc 12845025  T
Q  157 ctcac-aaatttccctcactaa 177  Q
    ||| | |||||| |||||||||    
T  12845024 ctctctaaattttcctcactaa 12845003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 14886690 - 14886561
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||| ||||| ||| | ||||| ||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||| |    
T  14886690 aaaagcaaaattagggaggaaaattagtgacagaaaaaataaaatccctcacatattctttggtcgtaaaatttagtgacggaattagagagggatttga 14886591  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||| |||||||||    
T  14886590 tgttttccctcactaaattttcctcactaa 14886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 26224557 - 26224428
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  |||||| ||||||||||||||||||||||||||||||||||    
T  26224557 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagagagggatttca 26224458  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||| ||||    
T  26224457 tgttttccctcactaaatatccctcgctaa 26224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 5360538 - 5360428
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| |    
T  5360538 aaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagagagagatttta 5360439  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  5360438 cgttttccctc 5360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 14772800 - 14772690
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||||||||||||||||| |||||||||| || |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  14772800 cactattagaaaaagcaaaattagggagagaaatttgtgacgaaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagag 14772701  T
Q  139 agggatttcat 149  Q
    || ||||||||    
T  14772700 agagatttcat 14772690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 1939252 - 1939381
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| | ||||| || |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  1939252 aaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaattttttggtcgcaaaatttaatgacggaattagagagggatttca 1939351  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||| |||||  ||| |||||||||||    
T  1939352 tgttttctctcactgaatatccctcactaa 1939381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 11049761 - 11049890
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||||||||  ||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  11049761 aaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagagatttca 11049860  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| || ||||||||    
T  11049861 tgttttccctcactaaatatctctcactaa 11049890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 21141068 - 21140939
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||||  |||||   ||||||||||||||||||||||||||||||||||||||||    
T  21141068 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcccaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 21140969  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  21140968 cgttttccctcacaaaatttccctcactaa 21140939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 27796844 - 27796973
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| || |||| || | ||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  27796844 aaaagcaaaattagcgagggaaattagtgacgaaaaaaatgatatttctcataaattccttgattgcaaaatttagtgacggaattagagagggatttca 27796943  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  27796944 tgttttccctcactaaatatccctcactaa 27796973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 18048927 - 18048788
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||| ||||||||| |||| ||||| ||| ||||||| |||||||| |||| |||||| ||||||||||||||||||||  ||||||| |    
T  18048927 cactactaggaaaaacaaaattagagaggaaaattagtgacggaaaaaataaaatttctcacaaattcgttggtcgcaaaatttagtgagagaattaggg 18048828  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  18048827 agggatttcatgtttttcctcactaaatttccctcactaa 18048788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 23281901 - 23281786
Alignment:
Q  63 ggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac- 161  Q
    ||||||||||| |||  |||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  23281901 ggagggaaattagtgatggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcaca 23281802  T
Q  162 aaatttccctcactaa 177  Q
    ||||||||||| ||||    
T  23281801 aaatttccctccctaa 23281786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 5192199 - 5192317
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| |||  |||||| || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |    
T  5192199 aaaagcaaaattagcgaggaaaattagtgaaggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagagggatttta 5192298  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  5192299 cgttttccctcactaattt 5192317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 6605506 - 6605624
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  || |||||||||| ||||||||||||||||||| |||||||    
T  6605506 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttagtcgcaaaatatagtgacggaattagagagagatttca 6605605  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  6605606 tgttttccctcactaattt 6605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 20182274 - 20182145
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   || |||||||||||||||||||||||||||||||||||||    
T  20182274 aaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagagagggatttca 20182175  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  20182174 cgttttccctcacaaaatttgcctcactaa 20182145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 22153717 - 22153846
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   || |||||||||||||||||||||||||||||||||||||    
T  22153717 aaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagagagggatttca 22153816  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  22153817 cgttttccctcacaaaatttgcctcactaa 22153846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 33250723 - 33250847
Alignment:
Q  54 caaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttt 153  Q
    ||||||||  |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  33250723 caaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagaggaatttcatgttt 33250822  T
Q  154 tccctcac-aaatttccctcactaa 177  Q
    |||||||| |||| || ||||||||    
T  33250823 tccctcactaaatatctctcactaa 33250847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 6065579 - 6065448
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    ||||||||||| |||||||||||||||||||| |||||  || ||||||| |||||||  |||| |||||||||| |||||||||||| ||||  |||||    
T  6065579 ttacactattaggaaaagcaaaattagggaggaaaattaatgacggaaaaaataaaatctctcacaaattctttgatcgcaaaatttaatgacaaaatta 6065480  T
Q  136 gagagggatttcatgttttccctcacaaattt 167  Q
    |||||| ||||| ||||||||||||| |||||    
T  6065479 gagaggaatttcttgttttccctcactaattt 6065448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 27705521 - 27705422
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||| || |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  27705521 cggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaa 27705422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 12499345 - 12499227
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||| | ||| ||||||| || |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  12499345 aaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttta 12499246  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  12499245 cgttttccctcactaattt 12499227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 12506674 - 12506556
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||| | ||| ||||||| || |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  12506674 aaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttta 12506575  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  12506574 cgttttccctcactaattt 12506556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 12509556 - 12509674
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||| | ||| ||||||| || |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |    
T  12509556 aaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttta 12509655  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  12509656 cgttttccctcactaattt 12509674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 2669438 - 2669309
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| || |||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |    
T  2669438 aaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttta 2669339  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| || ||| ||||||||||||||||    
T  2669338 cgtttttccacactaaatttccctcactaa 2669309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 177
Target Start/End: Original strand, 12351604 - 12351725
Alignment:
Q  57 aattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttcc 156  Q
    ||||| ||||||||||| ||| ||||||| ||||||||||||| |||||| || ||||||||||||| ||||||||||||||||  |||||| |||||||    
T  12351604 aattaaggagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttaatgacggaattagagagaaatttcacgttttcc 12351703  T
Q  157 ctcac-aaatttccctcactaa 177  Q
    ||| | ||||||||||||||||    
T  12351704 ctctctaaatttccctcactaa 12351725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 21990185 - 21990313
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||||| |||||  |||||||||||| |||||||||||||||||||||||||| |    
T  21990185 aaaagcaaaattagcgagggaaattaatgacggaaaa-atgaaattcctcacaaatttcttggtcgcaaaaattagtgacggaattagagagggatttta 21990283  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  21990284 cgttttccctcactaaattttcctcactaa 21990313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 26939716 - 26939587
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||  |||||||||| ||| |  |||| || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  26939716 aaaagtaaaattactgagggaaattagtgacaaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttca 26939617  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| || ||||||||    
T  26939616 tgttttccctcactaaatatctctcactaa 26939587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 30833970 - 30834099
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||||||||  |||| ||||||||||||||||| |||| ||||||||||||||||| |    
T  30833970 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcactaattttttggtcgcaaaatttaatgacagaattagagagggatttta 30834069  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||| |||||||| |||||||| |||||||    
T  30834070 cgttctccctcactaaatttccttcactaa 30834099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 15448514 - 15448402
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||  |||||||||||| |||||||||||||||||||||| |    
T  15448514 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttaatgacggaattagagagggatttta 15448415  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  15448414 cgttttccctcac 15448402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 22055621 - 22055751
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||| ||||||||| ||||||||||  || | ||||| ||||||||||||| |||||| |||||| ||||||| | ||| |||||||||||||||||||    
T  22055621 gaaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatttc 22055720  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    ||||||| |||||| ||| ||||||||||||    
T  22055721 atgtttttcctcactaaacttccctcactaa 22055751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9885372 - 9885243
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||  |||| |||||  ||||| |||||||||||||||  ||||| ||||||||||||    
T  9885372 aaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggttgcaaaatttagtgacaaaattaaagagggatttca 9885273  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||| | |||||||    
T  9885272 tgttttccctcactaaattttcgtcactaa 9885243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 11350309 - 11350193
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||   | |||||| ||  ||||||||||||||||| ||||||||||| |||||     
T  11350309 gaaaagcaaaattagggagggaaatttgtgacggaaaacaaaaaaatc---acaaattccttaatcgcaaaatttagtgacagaattagagagcgatttt 11350213  T
Q  148 atgttttccctcacaaattt 167  Q
    |||||||||||||| |||||    
T  11350212 atgttttccctcactaattt 11350193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 16250812 - 16250941
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||||| |||||   || ||||||||||||||||| ||||||||||| |||||||    
T  16250812 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacagaattagagagagatttca 16250911  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||| ||||||||    
T  16250912 cgttttccctcacaaaatttctctcactaa 16250941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 18492498 - 18492369
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || | ||||| ||| ||||||| || ||||| |||| ||||||  |||||||||||||||||||||||||||||| |||||||||    
T  18492498 aaaagcaaaattagcgatgcaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagagtgggatttca 18492399  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||||||| || ||||||| ||||||||    
T  18492398 cgttttcccttacaaaatttctctcactaa 18492369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 21691495 - 21691635
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaattt-gtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||| ||| ||||| |||||||| |||||||| || |||  | |||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  21691495 cactactaaaaaaagtaaaattagagagggaaaattagtgatgaaaaaaataaaatttctcacaaattctttggtcgcaaaatttagtgacgaaattaga 21691594  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||| ||||| |||| | ||| ||||||||||||    
T  21691595 gagggatttcacgtttttcctctctaaaattccctcactaa 21691635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 33547645 - 33547557
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  33547645 cggaaaaaataaaatccctcacaaattctttggtcgcaaaatttagtgacaaaattagatagggatttcatgttttccctcactaattt 33547557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 20692821 - 20692939
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||  |||| ||||| ||| ||||||| ||||||||| | |||| || ||||||||||||||||||||||| |||||||||||||||| |    
T  20692821 aaaaacaaaattaacgaggaaaattagtgacggaaaaaataaaattctttataagttttttggtcgcaaaatttagtgacgaaattagagagggatttta 20692920  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  20692921 cgttttccctcactaattt 20692939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9060219 - 9060091
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  ||| |||||| ||| ||||||| ||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||  ||||||    
T  9060219 aaaagcaaaattaaagagcgaaattagtgacggaaaaaataaaatccctcacaaattttttggtcgcaaaatttagtgacagaattagagagaaatttca 9060120  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    || |||||||| | |||||||| |||||||    
T  9060119 tg-tttccctcgctaaatttccttcactaa 9060091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 12160857 - 12160985
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| || |||| || |||||||||| ||||| |||| ||| |||||||||||||| |||||||||||||||| |    
T  12160857 aaaagtaaaattagcgagggaaattagtgacgtaaaaaatgaaattcctcacaaattttttgatcg-aaaatttagtgacgaaattagagagggatttta 12160955  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| | |||||||||    
T  12160956 tgttttccctcactaaatattcctcactaa 12160985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 13145100 - 13145013
Alignment:
Q  80 ggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    |||||| || |||||||||| |||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||    
T  13145100 ggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaagagagatttcacgttttccctcactaattt 13145013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 15509285 - 15509186
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||| |||||||||||||||||||||||||||||||||    
T  15509285 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcggaaaatttagtgacggaattagagagggatttca 15509186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 12205195 - 12205305
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||| || |||||| ||| |||||||||| ||||| |||| ||||||||   ||| ||||||||||||||||||||| |||||||||||    
T  12205195 aaaagtaaaattaggaagagaaattagtgacggaaaacattaaatttctcacaaattcttaaatcgtaaaatttagtgacggaattagtgagggatttca 12205294  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  12205295 cgttttccctc 12205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 15961417 - 15961535
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||| | |||||  ||| |||||||||||||| ||||||||||||||| |||| |    
T  15961417 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattccttacaaatttcttgatcgcaaaatttagtaacggaattagagaggaatttta 15961516  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  15961517 cgttttccctcactaattt 15961535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 28668229 - 28668111
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||  ||| ||||||| ||||||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||||| |    
T  28668229 aaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacggaattagaaagggatttta 28668130  T
Q  149 tgttttccctcacaaattt 167  Q
       |||||||||| |||||    
T  28668129 caatttccctcactaattt 28668111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 343593 - 343702
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctca-caaattt 167  Q
    ||||| ||| || |||| || |||||||||| ||||| |||||||||||| ||||||||| ||||||||||||||||| | |||||||||||  ||||||    
T  343593 aaattagtgacgtaaaaaatgaaattcctcacaaattttttggtcgcaaattttagtgacagaattagagagggattttacgttttccctcattaaattt 343692  T
Q  168 ccctcactaa 177  Q
    ||||||||||    
T  343693 ccctcactaa 343702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 12157386 - 12157491
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||| ||||||||||| ||| ||||||| ||||||| ||| | ||| |||||||||  ||||||||||||||||||||||||  |||||||    
T  12157386 aaaagcaaaattaaggagggaaattagtgacggaaaaaataaaatcccttacaaaatctttggtcataaaatttagtgacggaattagagaatgatttca 12157485  T
Q  149 tgtttt 154  Q
    | ||||    
T  12157486 tatttt 12157491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 12680195 - 12680323
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||| ||||| ||||| ||| ||||||| |||||||| ||||  ||||||||| ||| |||||||| ||||||||||||||||| ||||||    
T  12680195 aaaagaaaaattaaggagg-aaattagtgacggaaaaaataaaattgctcacgaattctttgatcgtaaaatttaatgacggaattagagaggaatttca 12680293  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||| | |||||| |||||||||    
T  12680294 cgttttccctctctaaattttcctcactaa 12680323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 17919665 - 17919568
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    |||| ||||||||| ||| |||||   || ||||||| || |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17919665 aaaaacaaaattagcgagagaaatcaatgacggaaaaaatgaaattcatcataaattccttggtcgcaaaatttagtgacggaattagagagggattt 17919568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 14036708 - 14036620
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| ||||||  || |||||||||||| |||| ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  14036708 aaattcctcacaaattccatgatcgcaaaatttaatgacagaattagagagggatttcacgttttccctcacaaaatttccctcactaa 14036620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 1955010 - 1954892
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||| ||||||||  ||| ||||||| ||||||||| ||| |||||  |||||| |||||||| |||| ||||||| ||| |||||||    
T  1955010 gaaaagcaaaattaggaagggaaatgagtgacggaaaaaataaaattcgtcacaaatttcttggtcacaaaattttgtgatggaattataga-ggatttc 1954912  T
Q  148 atgttttccctcacaaattt 167  Q
    ||||||||| |||| |||||    
T  1954911 atgttttccttcactaattt 1954892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 19175828 - 19175915
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaatttccctcactaa 177  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||| |||| |  ||||||||||| |||||||||| ||||    
T  19175828 aaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagaggaattttacattttccctcactaatttccctctctaa 19175915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 16118287 - 16118164
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    |||||||||| |||| | ||||||||||| ||||||| ||| |||||||  ||||||  || | |||||| | | |||||||||||| ||||| ||||||    
T  16118287 tacactattaggaaaggtaaaattagggacggaaattagtgacggaaaaactaaaatctcttacaaattcctcgatcgcaaaatttaatgacgaaattag 16118188  T
Q  137 agagggatttcatgttttccctca 160  Q
    |||| ||||||||||| |||||||    
T  16118187 agagagatttcatgttctccctca 16118164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 10929505 - 10929618
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcc-tcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    ||||| |||||||||||| | ||||| ||| ||||||| || |||| || ||| |||||| || ||||||||||||| ||||||||| | |||| |||||    
T  10929505 gaaaatcaaaattagggaagaaaattagtgacggaaaaaattaaatcccctcacaaattcctttgtcgcaaaatttaatgacggaatcaaagagagattt 10929604  T
Q  147 catgttttccctca 160  Q
    ||||||||||||||    
T  10929605 catgttttccctca 10929618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 10458893 - 10458802
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagag 140  Q
    ||||| |||||||| |||||||||| ||| ||||||| || || ||||||| |||||| ||||| |||||||||||||| ||||||| ||||    
T  10458893 aaaagtaaaattagtgagggaaattagtgacggaaaaaatgaatttcctcacaaattccttggttgcaaaatttagtgatggaattaaagag 10458802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 11431638 - 11431779
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaaca--taaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||| ||||||||| ||||||||||||  ||||| ||| ||||||| |  ||||||  |||| |||||||||  | ||||||||||||||||||||||    
T  11431638 acactactaagaaaagtaaaattagggagaaaaattagtgacggaaaaaaaataaaatctctcacaaattctttatt-gcaaaatttagtgacggaatta 11431736  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
     |||||||| ||  ||||| |||| | ||||||||||||||||    
T  11431737 aagagggatatcgcgtttttcctctctaaatttccctcactaa 11431779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 5270502 - 5270392
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttgg-tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatt 166  Q
    |||||||||  |||||| |||||||| |||| ||||| ||| | ||| |||||||||||||||||||||||||| ||||||  ||||||||| | ||| |    
T  5270502 aaatttgtgatggaaaaaataaaatttctcacaaatttttttgatcgtaaaatttagtgacggaattagagaggaatttcacattttccctctctaaaat 5270403  T
Q  167 tccctcactaa 177  Q
    |||||||||||    
T  5270402 tccctcactaa 5270392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 28221730 - 28221614
Alignment:
Q  40 actattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagaga 139  Q
    ||||||| ||||| |||||| ||||||||||||| |||  |||||| |||||||| |||||||||| |||| ||||||| |||| |||   | |||||||    
T  28221730 actattaggaaaaacaaaatcagggagggaaattagtgagggaaaaaataaaatttctcataaattttttgatcgcaaactttaatgagaaagttagaga 28221631  T
Q  140 gggatttcatgttttcc 156  Q
      |||||||||| ||||    
T  28221630 atgatttcatgtgttcc 28221614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 3673184 - 3673233
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagaga 139  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  3673184 aaattcctcacaaattttttggtcgtaaaatttagtgacggaattagaga 3673233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 5250268 - 5250195
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaattt 122  Q
    ||||| ||||| || |||||||||| ||| ||||||| || ||||||||||||||||  |||||||||||||||    
T  5250268 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcataaatttcttggtcgcaaaattt 5250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 2396313 - 2396227
Alignment:
Q  69 aaatttgtgtcggaaaacataaaa-ttcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||| | |||||||| ||||||||  ||||||  |||||| |||||    
T  2396313 aaattagtgacggaaaaaataaaaattcctcataaattctttggttgtaaaatttaatgacggaaacagagagaaatttcacgtttt 2396227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 8844164 - 8844252
Alignment:
Q  35 tttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctc-ataaattctttggtcgcaaaattt 122  Q
    ||||||||| ||  ||||| ||||| ||||||||||||| ||| ||||||| |||||||  ||| | |||||  |||||||||||||||    
T  8844164 tttacactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaatctctcaacaaatttattggtcgcaaaattt 8844252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 9878525 - 9878596
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatt 121  Q
    ||||||||||||| |||||||| || |||  |||||| ||||||| ||| | |||||||||||||| ||||||    
T  9878525 aaaagcaaaattatggagggaatttagtgatggaaaa-ataaaatccctaacaaattctttggtcgtaaaatt 9878596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 58721 - 58582
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  58721 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaaaaatttcttggtcgcaaaatttagtgacggaattagag 58622  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  58621 agggatttcatgttttccctcactaaatttccctcactaa 58582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 30783473 - 30783334
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  30783473 cactactaggaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaattcattggtcgcaaaatttagtgacggaattagag 30783374  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  30783373 agggatttcatgttttccctcactaaatttccctcactaa 30783334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 41637743 - 41637614
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  41637743 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 41637644  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||| |||||||||    
T  41637643 tgttttccctcactaaattttcctcactaa 41637614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 31266489 - 31266350
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||| |||||||||||||||||||| |  ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  31266489 cactactaggaaaagtaaaattagggagggaaattttttacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 31266390  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  31266389 agggatttcatgttttccctcgctaaatttccctcactaa 31266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 29749413 - 29749542
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||    
T  29749413 aaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagggagggatttca 29749512  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||| |||||||||    
T  29749513 tgttttccctcactaaattttcctcactaa 29749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 27327752 - 27327616
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| || | ||||||||||||||||||||||| |    
T  27327752 acactactaggaaaagcaaaattagggatggaaatttgtgacggaaaacataaaattcctcacaaattccttagacgcaaaatttagtgacggaattaaa 27327653  T
Q  138 gagggatttcatgttttccctcac-aaatttccctca 173  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27327652 gagggatttcatgttttccctcactaaatttccctca 27327616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 32300576 - 32300447
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32300576 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 32300477  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  32300476 cgttttccctcacaaaatttccctcactaa 32300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 28841341 - 28841481
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || ||||||||||||||| |||||||||| ||  ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  28841341 acactactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 28841440  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||| ||| |||| |||||||||||    
T  28841441 gagggatttcatgttttcccacactaaatatccctcactaa 28841481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 28319589 - 28319713
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  28319589 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 28319688  T
Q  149 tgttttccctcac-aaatttccctc 172  Q
     |||||||||||| |||||||||||    
T  28319689 cgttttccctcacaaaatttccctc 28319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 1141661 - 1141532
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||||||||||||||||| |||||||||||||||||||    
T  1141661 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattagagagggatttca 1141562  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  1141561 cgttttccctcacaaaatttccctcactaa 1141532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 15636745 - 15636874
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   ||||||||||||||||||||| ||||||||||||||||||    
T  15636745 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgaaattagagagggatttca 15636844  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  15636845 cgttttccctcacaaaatttccctcactaa 15636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 18551253 - 18551392
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| ||  |||||||||||||||||||||||||||    
T  18551253 cactactaaaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttagtgacggaattagag 18551352  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||| |||||||||||||| |||| |||||||||||    
T  18551353 agggattttatgttttccctcactaaatatccctcactaa 18551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 43408521 - 43408639
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  43408521 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 43408620  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  43408621 cgttttccctcactaattt 43408639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 8430421 - 8430292
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| | |||||||| ||| ||||||| ||||||||||||| ||||| | || ||| |||||||||||||||||||||||||||||||||    
T  8430421 aaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattcctcacaaattttatgatcgtaaaatttagtgacggaattagagagggatttca 8430322  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  8430321 cgttttccctcacaaaatttccctcactaa 8430292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 18916407 - 18916539
Alignment:
Q  45 taagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggat 144  Q
    ||||||||||||||||||| |||||||||  || ||||||| ||||||| ||||| ||||| |||| ||||||||||||||||| |||||||||||||||    
T  18916407 taagaaaagcaaaattaggcagggaaattactgacggaaaa-ataaaatccctcacaaattttttgatcgcaaaatttagtgactgaattagagagggat 18916505  T
Q  145 ttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||| | ||||||| ||||||||    
T  18916506 ttcatgttttccctccctaaatttctctcactaa 18916539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 20065084 - 20065213
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||||||||||||||||| |||||||||||||||||||    
T  20065084 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgactgaattagagagggatttca 20065183  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||||| ||||||||||||||||    
T  20065184 cgtttttcctcacaaaatttccctcactaa 20065213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 22140374 - 22140503
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  22140374 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 22140473  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||||  |||| ||||||||||||||||    
T  22140474 cgttttctttcacaaaatttccctcactaa 22140503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 23388388 - 23388517
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || |||||| ||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  23388388 aaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattcttcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 23388487  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  23388488 cgttttccctcacaaaatttccctcactaa 23388517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 37724002 - 37724131
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || |||||||||| ||| ||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  37724002 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggtattagcgagggatttca 37724101  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||| ||||||||    
T  37724102 cgttttccctcactaaatttctctcactaa 37724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 37552352 - 37552240
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |    
T  37552352 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagagagggatttta 37552253  T
Q  149 tgttttccctcac 161  Q
      |||||||||||    
T  37552252 cattttccctcac 37552240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 7093693 - 7093575
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||| |    
T  7093693 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacaaaattagagagggatttta 7093594  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  7093593 cgttttccctcactaattt 7093575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 13788052 - 13788194
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  |||||||||||||| |||||||||  ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||| |||||    
T  13788052 ttacactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaatta 13788151  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||| |  ||||||||||| |||||| |||||||||    
T  13788152 gagagggattttacattttccctcactaaattttcctcactaa 13788194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 32009078 - 32008948
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| |||| ||||| ||| ||||||| | | |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  32009078 aaaagcaaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttt 32008979  T
Q  148 atgttttccctca-caaatttccctcactaa 177  Q
    | |||||||||||  ||||||||||||||||    
T  32008978 acgttttccctcattaaatttccctcactaa 32008948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 21293721 - 21293850
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || ||||| |||| ||||||  |||||| ||||||||||||||||||||||||| |||||||    
T  21293721 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgtaaaatttagtgacggaattagagagagatttca 21293820  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  21293821 cgttttccctcacaaaatttccctcactaa 21293850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 32185957 - 32185828
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || |||||||||  |||||   |||||| |||||||||||||||||||||||||||||||||    
T  32185957 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcatggtcgtaaaatttagtgacggaattagagagggatttca 32185858  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  32185857 cgttttccctcacaaaatttccctcactaa 32185828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 41736297 - 41736168
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||| |    
T  41736297 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacgaaattagagagggatttta 41736198  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| |||||| |||||||||    
T  41736197 cattttccctcactaaattttcctcactaa 41736168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 12779725 - 12779613
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||| |    
T  12779725 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacgaaattagagaggaatttta 12779626  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  12779625 cgttttccctcac 12779613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 13613103 - 13613215
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||| ||||| ||| || |||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  13613103 aaaagaaaaattagcgaggaaaattagtgacgaaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttta 13613202  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  13613203 cgttttccctcac 13613215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 44476385 - 44476503
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||| |    
T  44476385 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattccttggtcgcaaaatttagtgacggaattagagagagatttta 44476484  T
Q  149 tgttttccctcacaaattt 167  Q
     ||||||| |||| |||||    
T  44476485 cgttttccttcactaattt 44476503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 14757131 - 14757260
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || | |||||  || ||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||    
T  14757131 aaaagcaaaattagcgaagaaaattaatgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagagatttca 14757230  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| || ||||||||    
T  14757231 tgttttccctcactaaatatcactcactaa 14757260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 26687701 - 26687830
Alignment:
Q  50 aaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||| |||||||||||  || ||||||| | ||||||| |||| |||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  26687701 aaagcaaaattaaggagggaaattaatgacggaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtgacggaattagagatggatttca 26687800  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    |||||||| |||| ||||||| ||||||||    
T  26687801 tgttttccgtcactaaatttcgctcactaa 26687830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 28262489 - 28262360
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||  ||||||||| |||  |||||| || |||||||||| |||||   ||||| ||||||||||||||||||||||||||||||||||    
T  28262489 aaaagtaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagagggatttca 28262390  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  28262389 cgttttccctcacaaaatttccctcactaa 28262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 27523086 - 27523007
Alignment:
Q  99 ataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  27523086 ataaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaa 27523007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 44723057 - 44722930
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  ||  |||||| || |||||||| | |||||| || ||||||||||||||||||||||||||||||||||||||    
T  44723057 aaaagcaaaattagcgagggaaattaatgatggaaaaaatgaaattccttacaaattccttagtcgcaaaatttagtgacggaattagagagggatttca 44722958  T
Q  149 tgttttccctcac-aaatttccctcact 175  Q
    | ||||| ||||| |||| |||||||||    
T  44722957 tattttctctcactaaatatccctcact 44722930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 26243331 - 26243449
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||| ||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| |||| |    
T  26243331 aaaagcaaaattaacgagggaaattagtggcggtaaaaataaaattcctcacaaattcattggtcgtaaaatttagtgacggaattagagaggaatttta 26243430  T
Q  149 tgttttccctcacaaattt 167  Q
     ||||| |||||| |||||    
T  26243431 cgtttttcctcactaattt 26243449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 35697573 - 35697475
Alignment:
Q  56 aaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    |||||||||||||||||| ||  ||||||| |||||||  |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35697573 aaattagggagggaaattagtaacggaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgacggaattagagaggaatttcatgtttt 35697475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 44366006 - 44366136
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||| ||||||||| ||||||||||  || | ||||| ||||||||||||| |||||| |||||| ||||||| | ||| |||||||||||||||||||    
T  44366006 gaaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatttc 44366105  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    ||||||| |||||| ||| ||||||||||||    
T  44366106 atgtttttcctcactaaacttccctcactaa 44366136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 23857968 - 23858079
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||| ||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||| |    
T  23857968 aaaagcaaaattagcgagggaaattagtgacgggaaa-atgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaatgatttta 23858066  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  23858067 cgttttccctcac 23858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 36550974 - 36550849
Alignment:
Q  35 tttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatt 134  Q
    ||||||||| ||  |||| ||||||||| |||||||||| |||  |||||| ||||| | ||||| || || ||||||||||||||||||||| ||||||    
T  36550974 tttacactactagaaaaaacaaaattagagagggaaattagtgatggaaaaaataaa-tccctcacaagttatttggtcgcaaaatttagtgatggaatt 36550876  T
Q  135 agagagggatttcatgttttccctcac 161  Q
    | |||||||||||||||||||||||||    
T  36550875 atagagggatttcatgttttccctcac 36550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 37802379 - 37802517
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||||||||||||||||| ||||||  || ||||||| |||||||  |||   |||| ||||||||||||||||||||||||||||||||    
T  37802379 cactactaggaaaagcaaaattagggagagaaattgatgacggaaaaaataaaatctctc-gcaattttttggtcgcaaaatttagtgacggaattagag 37802477  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |  ||||| | |||||||||| | ||||||||||||||||    
T  37802478 actgattttacgttttccctctctaaatttccctcactaa 37802517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 38362281 - 38362391
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||||||||||| |||||| |||||| |||||||| | |||||| |    
T  38362281 aaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaattaagtgacagaattagaaaaggatttta 38362380  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  38362381 cgttttccctc 38362391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 27039918 - 27040003
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatt 134  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  |||||||||||||||||||||||||||    
T  27039918 aaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 27040003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 18609650 - 18609510
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||||||| |||||| |||| || ||||| ||||| ||| |||| || ||| ||| ||||| |||||| ||| ||||||||||| || | | |||||||    
T  18609650 acactattaggaaaagtaaaaataaggaggaaaattagtgacggagaaaatagaatccctcacaaattccttgatcgcaaaattttgtcatgaaattaga 18609551  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  18609550 gaggtatttcatgttttccctcactaaatttcccccactaa 18609510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 40018911 - 40018798
Alignment:
Q  65 agggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aa 163  Q
    ||||||||| ||| ||||||| |||||||| || | |||||| ||||| |||||||| |||||  ||||||||||| |||||||||||||||||||| ||    
T  40018911 agggaaattagtgacggaaaaaataaaatttcttacaaattcgttggttgcaaaattcagtgagagaattagagagagatttcatgttttccctcactaa 40018812  T
Q  164 atttccctcactaa 177  Q
    |||| | |||||||    
T  40018811 attttcgtcactaa 40018798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 2556231 - 2556091
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| ||| ||||| |||||||| |||| ||||| |||  |||||| |||||||| |||| |||||  ||||| | ||||||||||||||||||||||    
T  2556231 acactactaaaaaaagtaaaattagagaggaaaattagtgatggaaaaaataaaatttctcacaaatttcttggttgtaaaatttagtgacggaattaga 2556132  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||   ||||||  ||||||||| | ||| ||||||||||||    
T  2556131 gaaaaatttcacattttccctctctaaaattccctcactaa 2556091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 31966555 - 31966646
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac 161  Q
    ||||| ||| ||||||| ||||||| ||| |||||||| |||||||||||||||||| ||  |||||||||| ||||||||||| ||||||||    
T  31966555 aaattagtgacggaaaaaataaaatccct-ataaattccttggtcgcaaaatttagtaacataattagagagagatttcatgttatccctcac 31966646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 8763757 - 8763647
Alignment:
Q  51 aagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatg 150  Q
    ||||||||||||||||  || || ||| ||||||| |||||||  | || |||||| ||| ||  |||||||| ||||||||||||||| ||||||||||    
T  8763757 aagcaaaattagggagaaaagttagtgacggaaaaaataaaatctcgcacaaattccttgatcataaaatttaatgacggaattagagatggatttcatg 8763658  T
Q  151 ttttccctcac 161  Q
    |||||| ||||    
T  8763657 ttttccttcac 8763647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 29998633 - 29998698
Alignment:
Q  113 cgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| || | ||| ||||||||||||    
T  29998633 cgcaaaatttagtgacggaattagagaaggatttcacgttttccttctctaaaattccctcactaa 29998698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 36374034 - 36373896
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || ||||| |||||||||||||  || || | | ||||||| ||||||| ||||  |||||| ||| ||| ||||||||||||| |||||  |    
T  36374034 acactactaggaaaaacaaaattagggagtaaatttagcgacggaaaaaataaaatccctctcaaattccttgatcgtaaaatttagtgactgaatt--a 36373937  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||| ||||||  ||||||||||| |||||| |||||||||    
T  36373936 gaggaatttcacattttccctcactaaattttcctcactaa 36373896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 9004359 - 9004447
Alignment:
Q  90 aaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||| ||||||||||| || ||  ||||||||||||| ||||||||||||  |||| |  ||||||||||| ||||||||||||||||    
T  9004359 aaatttctcataaattccttagttacaaaatttagtgatggaattagagagaaattttacattttccctcactaaatttccctcactaa 9004447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 22192235 - 22192188
Alignment:
Q  131 aattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  22192235 aattagagagggatttcatgttttccctcactaaatttccgtcactaa 22192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 27058407 - 27058455
Alignment:
Q  130 gaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  27058407 gaattagagagggattttacgttttccctcactaaatttccctcactaa 27058455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 22192304 - 22192232
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatt 121  Q
    ||||||||||| |||||| |||||| ||| ||||||| |||||||  |||| |||||  |||||| |||||||    
T  22192304 aaaagcaaaatcagggagagaaattagtgacggaaaaaataaaatctctcacaaatttattggtcacaaaatt 22192232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 6e-53; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 25397787 - 25397916
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  25397787 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattaga 25397886  T
Q  138 gagggatttcatgttttccctcacaaattt 167  Q
    |||||||||||||||||||||||| |||||    
T  25397887 gagggatttcatgttttccctcactaattt 25397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 33818571 - 33818700
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  33818571 aaaagcaaaattggggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 33818670  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  33818671 tgttttccctcactaaatttccctcactaa 33818700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 23423755 - 23423895
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || || ||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  23423755 acactactaggataagcaaaattagggagggaaatttgtgacgaaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattaga 23423854  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  23423855 gagggatttcatgttttccctcactaaatttcactcactaa 23423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 618434 - 618294
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  618434 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 618335  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  618334 gagggatttcatgttttccctcactaaatatccctcactaa 618294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 16121849 - 16121978
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16121849 aaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagggatttca 16121948  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  16121949 tgttttccctcactaaatatccctcactaa 16121978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 27428012 - 27428151
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||| ||||||||||||||||||| ||| || |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27428012 cactactaataaaagaaaaattagggagggaaattagtgacgaaaaaaataaaattgctaataaattctttggtcgcaaaatttagtgacggaattagag 27428111  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| |||||||||| | |||||| |||||||||    
T  27428112 agggatttcacgttttccctctctaaattttcctcactaa 27428151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 746878 - 746996
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  746878 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 746977  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  746978 cgttttccctcactaattt 746996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 17039641 - 17039770
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  17039641 aaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 17039740  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| | ||||||||||||||    
T  17039741 cgttttccctcactatatttccctcactaa 17039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 23975764 - 23975635
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  23975764 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 23975665  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  23975664 cgttttccctcacaaaatttccctcactaa 23975635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 35620343 - 35620478
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  |||||||||||||| |||||||||| ||| ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  35620343 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaa-ttcctcacaaattccttggtcgcaaaatttagtgacggaattaga 35620441  T
Q  138 gagggatttcatgttttccctcac-aaatttccctca 173  Q
    || ||||||||||||||||||||| |||| |||||||    
T  35620442 gaaggatttcatgttttccctcactaaatatccctca 35620478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 33816786 - 33816897
Alignment:
Q  67 ggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaat 165  Q
    ||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  33816786 ggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggaatttcatgttttccctcactaaat 33816885  T
Q  166 ttccctcactaa 177  Q
    ||||||||||||    
T  33816886 ttccctcactaa 33816897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 2472724 - 2472849
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2472724 aaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagagggatttca 2472823  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
    ||||||||||||| |||| |||||||    
T  2472824 tgttttccctcactaaatatccctca 2472849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 8108870 - 8108999
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||| ||||||    
T  8108870 aaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagaggaatttca 8108969  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||| ||||||||    
T  8108970 tgttttccctcacaaaatttctctcactaa 8108999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 8886861 - 8886990
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||||||| || |||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  8886861 aaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 8886960  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  8886961 cattttccctcactaaatttccctcactaa 8886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 36196523 - 36196394
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  36196523 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaaatccatggtcgcaaaatttagtgacggaattagagagggatttca 36196424  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  36196423 cattttccctcacaaaatttccctcactaa 36196394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 38837681 - 38837799
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |    
T  38837681 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagagggatttta 38837780  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  38837781 cgttttccctcactaattt 38837799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 12045856 - 12045727
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  ||||||| |||||||||||||||||||||||| |||||| |    
T  12045856 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaaggatttta 12045757  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  12045756 cgttttccctcactaaatttccctcactaa 12045727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 12328236 - 12328365
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||  ||||||| || |||||||||| |||||  ||| |||||||||||||||||||||||||||||| ||||||    
T  12328236 aaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagaggaatttca 12328335  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  12328336 tgttttccctcactaaatatccctcactaa 12328365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 15061102 - 15060973
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| | ||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  15061102 aaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 15061003  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||||| ||||||||||||||||    
T  15061002 cgtttttcctcacaaaatttccctcactaa 15060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 25673228 - 25673367
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||  ||||||||||||| ||||| ||| ||||||| |||||| |||| | ||||||||||||||||||||| |||||||||||||||    
T  25673228 acactactaggaaaataaaaattagggaggaaaattagtgacggaaaaaataaaactcct-acaaattctttggtcgcaaaattcagtgacggaattaga 25673326  T
Q  138 gagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  25673327 gagggatttcatgttttctgtcactaaatttccctcactaa 25673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 10494866 - 10494748
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||  ||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  10494866 aaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 10494767  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  10494766 cgttttccctcactaattt 10494748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 36597350 - 36597468
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||| |||||  |||||| || ||||||||||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||| |||| |    
T  36597350 aaaagcaaaatttgggagaaaaatttatgacggaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacagaattagagaggaatttta 36597449  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  36597450 tgttttccctcactaattt 36597468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 7888926 - 7888797
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||| |    
T  7888926 aaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggagttagagagggatttta 7888827  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  7888826 cgttttccctcactaaattttcctcactaa 7888797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 13620137 - 13620266
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| ||||||||||||| ||| ||||||| |||||||  |||| |||||  ||||||||||||||| ||||| |||||||||||||||||||    
T  13620137 aaaagaaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggtcgcaaaattttgtgacagaattagagagggatttca 13620236  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||||| |||||||    
T  13620237 tgttttccctcactaaatttccgtcactaa 13620266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 36831900 - 36832029
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| | | || |||| || ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||| |    
T  36831900 aaaagcaaaattagtgagggaaattagggacgaaaaaaatgaaattcctcataaattccttggtcacaaaatttagtgatggaattagagagggatttta 36831999  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  36832000 cattttccctcactaaatttccctcactaa 36832029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 26708599 - 26708707
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtt 152  Q
    |||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| | |||    
T  26708599 gcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaattttacgtt 26708698  T
Q  153 ttccctcac 161  Q
    |||||||||    
T  26708699 ttccctcac 26708707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 26978333 - 26978441
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtt 152  Q
    |||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| | |||    
T  26978333 gcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaattttacgtt 26978432  T
Q  153 ttccctcac 161  Q
    |||||||||    
T  26978433 ttccctcac 26978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 7003740 - 7003867
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| | ||||||||||| ||||||  || ||||||||||||||||||||||||||||  |||||||    
T  7003740 aaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagaga--gatttca 7003837  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  7003838 cgttttccctcacaaaatttccctcactaa 7003867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 16631884 - 16632002
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| |    
T  16631884 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagggatttta 16631983  T
Q  149 tgttttccctcacaaattt 167  Q
     ||||||| |||| |||||    
T  16631984 cgttttccttcactaattt 16632002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 17771978 - 17772096
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || |||||||||| ||| ||||||| || |||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||| |    
T  17771978 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaattccttgatcgcaaaatttagtgacggaattagagagagatttta 17772077  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  17772078 tgttttccctcactaattt 17772096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 33734982 - 33735088
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||||||| |||||  ||  |||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  33734982 gaaaagcaaaattagggaggaaaattaatgagggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtgacggaattaaagaggggtttc 33735081  T
Q  148 atgtttt 154  Q
    |||||||    
T  33735082 atgtttt 33735088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 40484173 - 40484055
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||  || ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  40484173 aaaagaaaaattagcgagggaaattagtgacggaaataatgaaatttcttataaattccttggtcgcaaaatttagtgacggaattagagagggatttta 40484074  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  40484073 cgttttccctcactaattt 40484055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 17986858 - 17986729
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| ||| |||||| ||| ||||||| || |||||| ||| |||||| || ||||||||||||||||||||||||||||| | ||||||    
T  17986858 aaaagtaaaattagtgagagaaattagtgacggaaaaaatgaaattcttcacaaattccttcgtcgcaaaatttagtgacggaattagagaagaatttca 17986759  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  17986758 tgttttccctcactaaatatccctcactaa 17986729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 20959637 - 20959508
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||| ||||   || ||||||| ||||||||||||| |||||| || |||| ||||||||||||||||||||||||| |||||||    
T  20959637 aaaagtaaaattagggaggaaaatcactgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttagtgacggaattagagagagatttca 20959538  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||| | ||||||||||||||||    
T  20959537 cgttttccctctctaaatttccctcactaa 20959508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 28265485 - 28265610
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||| ||||| ||| ||||||| || |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |    
T  28265485 aaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttta 28265584  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
     || ||||||||| ||||||||||||    
T  28265585 cgtcttccctcacaaaatttccctca 28265610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 24138839 - 24138963
Alignment:
Q  37 tacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||||||  |||||||||||||| |||| ||||| ||| ||||||| || ||||| |||| |||||  |||||||||||||||||||||||||||||    
T  24138839 tacactattagaaaaagcaaaattagcgaggaaaattggtgacggaaaaaatgaaatttctcacaaattgcttggtcgcaaaatttagtgacggaattag 24138938  T
Q  137 agagggatttcatgttttccctcac 161  Q
    |||| ||||| | ||||||||||||    
T  24138939 agagagattttacgttttccctcac 24138963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 25652583 - 25652719
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||||||||||||| |||||||||  ||| | ||||| || |||||||||| |||||| || |||||||||||| |||||||||||||||    
T  25652583 cactattagaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaattccttagtcgcaaaattttgtgacggaattagag 25652682  T
Q  139 agggatttcatgttttccctcac-aaatttccctcac 174  Q
    |||||||| |  ||||||||||| |||||||||||||    
T  25652683 agggattttacattttccctcactaaatttccctcac 25652719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 10420249 - 10420372
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| |||  ||| ||||||||| |||||||||| ||| ||||||| ||||||| ||||| || ||  |||||||||||||||||||||  |||||    
T  10420249 ttacactactaaagaaatcaaaattagagagggaaattagtgacggaaaaaataaaatccctcacaattttgttggtcgcaaaatttagtgacaaaatta 10420348  T
Q  136 gagagggatttcatgttttccctc 159  Q
    ||||||||||||||||||||||||    
T  10420349 gagagggatttcatgttttccctc 10420372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 4125198 - 4125316
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   |||||||||||||||||||||||||||||||| |||||||    
T  4125198 aaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagagatttca 4125297  T
Q  149 tgttttccctcacaaattt 167  Q
      ||||||||||| |||||    
T  4125298 cattttccctcactaattt 4125316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 23409110 - 23408980
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| |||  ||||| ||| ||||||| | | |||||||||| |||||  ||| |||||||||||||||||||||||||||||||||||     
T  23409110 aaaagcaaaattagcgagaaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagagggatttt 23409011  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | |||||||||||| ||||||||||||||||    
T  23409010 acgttttccctcactaaatttccctcactaa 23408980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 36716210 - 36716339
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| |||  |||||| || |||||||||| ||||||| |||||| |||||||| ||| ||||||||||| ||||||||    
T  36716210 aaaaacaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgaaggaattagagaaggatttca 36716309  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  36716310 cgttttccctcacaaaattttcctcactaa 36716339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 177
Target Start/End: Original strand, 3080700 - 3080835
Alignment:
Q  43 attaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagaggg 142  Q
    |||| |||||||||||||||| ||||||||| |||  |||||| |||||||  |||| ||||||||| ||| ||||| ||||||| | |||| |||||||    
T  3080700 attaggaaaagcaaaattaggtagggaaattcgtgatggaaaaaataaaatctctcacaaattctttagtcacaaaacttagtgatgaaatttgagaggg 3080799  T
Q  143 atttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||| |||||| | |||||||    
T  3080800 atttcatgttttccctcactaaattttcttcactaa 3080835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 11927786 - 11927925
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  ||||||||||||||||||  ||||| | |  |||||| ||||||| ||||| |||||  || ||||||||||||||||||||||||||||    
T  11927786 cactattagaaaaagcaaaattagggagataaattagagatggaaaaaataaaatccctcacaaattacttcgtcgcaaaatttagtgacggaattagag 11927885  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| ||||||| || | ||| ||||||||||||    
T  11927886 agggatttcacgttttccgtctctaaaattccctcactaa 11927925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 17036409 - 17036532
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  ||| |||||||||||||| || ||| ||| ||||| | ||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  17036409 ttacactactagaaaatgcaaaattagggagcgagattagtgacggaagaaataaaattcctcacaaattccttggtcgcaaaatttagtgacagaatta 17036508  T
Q  136 gagagggatttcatgttttccctc 159  Q
    |||||||||||   ||||||||||    
T  17036509 gagagggattttgcgttttccctc 17036532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 5982775 - 5982649
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||||||||| || |||||||||| ||| ||||||| | |  ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||     
T  5982775 aaaagcaaaatcagcgagggaaattagtgacggaaaaaaatggaattcctcacaaattccttggtcgcaaagtttagtgacggaattagagagggatttt 5982676  T
Q  148 atgttttccctcac-aaatttccctca 173  Q
    | |||||||||||| |||||| |||||    
T  5982675 aggttttccctcactaaattttcctca 5982649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 13974088 - 13974217
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| | | || |||| || |||||| ||| |||||   ||||||  ||||||||||||||||| ||||||||||||||    
T  13974088 aaaagcaaaattagcgagggaaattagcgacgaaaaaaatgaaattcttcacaaatttcatggtcgtgaaatttagtgacggaatcagagagggatttca 13974187  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  13974188 cgttttccctcacaaaatttccctcactaa 13974217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 32726732 - 32726865
Alignment:
Q  45 taagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggat 144  Q
    |||||||||||||||||||||| |||||| |||  |||||| ||||||  | | | |||||| |||||||||||||||||||||||||||||||||  ||    
T  32726732 taagaaaagcaaaattagggagcgaaattagtgatggaaaatataaaacccttgacaaattccttggtcgcaaaatttagtgacggaattagagagaaat 32726831  T
Q  145 ttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||  ||||||||| | |||||||| |||||||    
T  32726832 ttcacattttccctctctaaatttccttcactaa 32726865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 17079504 - 17079405
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||| ||||||| ||| | |||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||||||    
T  17079504 cggaaaaaataaaatcccttacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaatttccctcactaa 17079405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 20187941 - 20188080
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||||||||||||| || ||||||| ||| ||||||| ||||||||||||| |||||| ||| |||||||||||| |||| |||||||||    
T  20187941 cactattagcaaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacagaattagag 20188040  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    || ||||  | |||||| ||||| ||||||  ||||||||    
T  20188041 agtgattctacgttttctctcactaaatttttctcactaa 20188080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 35778270 - 35778152
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||| |||||||||||| |||  |||||| |||||||  |||| |||||| |||||||||||||||| | || |||| ||| ||||||||||    
T  35778270 aaaagtaaaatttgggagggaaattagtgatggaaaaaataaaatctctcacaaattcattggtcgcaaaatttaatcacagaatgagatagggatttca 35778171  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  35778170 tgttttccctcactaattt 35778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 31853131 - 31853208
Alignment:
Q  82 aaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctc 159  Q
    |||| ||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  31853131 aaaaaataaaatccctcataaattttatggtcgcaaaatttagtgacggaattagagagagatttcatgtttttcctc 31853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 161
Target Start/End: Original strand, 23974575 - 23974698
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||| || |||||| ||||||||| ||| ||||| ||| ||||||| |||||||  |||| |||||| || |||| |||||||| ||||| |||||||    
T  23974575 acactactaggaaaagaaaaattaggaaggaaaattagtgacggaaaaaataaaatctctcacaaattcctttgtcgtaaaatttaatgacgaaattaga 23974674  T
Q  138 gagggatttcatgttttccctcac 161  Q
    ||||||||  ||| ||||||||||    
T  23974675 gagggattgaatgctttccctcac 23974698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 9024323 - 9024224
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaa-ttagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| ||||||| |||| ||||||| |||||||||||||||||| ||  || |||||||| ||||||||||| |||||||| |||||    
T  9024323 aaattagtgacggaaaaaataaaatccctcgtaaattccttggtcgcaaaatttagtaacataatttagagagagatttcatgttatccctcactaattt 9024224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 16472191 - 16472320
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaa-tttagtgacggaattagagagggatttc 147  Q
    |||||||||||| |||||| ||||| |||||| |||| ||||||| | ||| |||||| |||||||||||| ||||||||| ||||||||||| |||| |    
T  16472191 aaaagcaaaatttgggagg-aaattagtgtcgaaaaaaataaaatccttcaaaaattcgttggtcgcaaaagtttagtgacagaattagagagcgattcc 16472289  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |  |||| |||| | |||||||| |||||||    
T  16472290 acttttttcctctctaaatttccgtcactaa 16472320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 16464735 - 16464689
Alignment:
Q  121 ttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  16464735 ttagtgacggaaatagagaggaatttcatgttttccctcactaattt 16464689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 29727928 - 29727985
Alignment:
Q  121 ttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||| |||||| |||||||||| | |||||| |||||||||    
T  29727928 ttagtgacggaattagagaggaatttcacgttttccctcgcaaaatttgcctcactaa 29727985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 22649406 - 22649449
Alignment:
Q  116 aaaatttagtgacggaattagagagggatttcatgttttccctc 159  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||    
T  22649406 aaaatttaatgacggaattagagaaggatttcacgttttccctc 22649449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 10288 - 10158
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  10288 gaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattctttaatcgcaaaatttagtgacggaattagagagggatttc 10189  T
Q  148 atgttttccctca-caaatttccctcactaa 177  Q
    |||||||||||||  ||||||||||||||||    
T  10188 atgttttccctcagtaaatttccctcactaa 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 14760996 - 14760867
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  14760996 aaaagcaaaattaaagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagtgagggatttca 14760897  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  14760896 tgttttccctcactaaatttccctcactaa 14760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 50845340 - 50845469
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  50845340 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 50845439  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||| || ||||||    
T  50845440 tgttttccctcactaaattttccacactaa 50845469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 12720938 - 12720809
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12720938 aaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 12720839  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  12720838 tgttttccctcactaaatatccctcactaa 12720809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 7830170 - 7830031
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||||||||||||||||||||||||| ||  ||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||| |    
T  7830170 cactactaggaaaagcaaaattagggagggaaatttatgatggaaaacataaaatttctcacaaattccttggtcgcaaaatttagtgacgaaattaggg 7830071  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  7830070 agggatttcatgttttccctcactaaatttccctcactaa 7830031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 13102455 - 13102316
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||     
T  13102455 cactactaggaaaagcaaaattaaggagggaaatttgtgacggaaaacataaaattcatcacaaattccttggtcgcaaaatttagtgacggaattagaa 13102356  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    || ||||| |||||||||||||| ||||||||||||||||    
T  13102355 agagattttatgttttccctcactaaatttccctcactaa 13102316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 6459346 - 6459217
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||| ||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  6459346 aaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 6459247  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  6459246 tgttttccctcactaaatatccctcactaa 6459217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9109985 - 9110114
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  9109985 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttca 9110084  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  9110085 tgttttccctcactaaatatccctcactaa 9110114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 45839421 - 45839292
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  45839421 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 45839322  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  45839321 tgttttccctcactaaatatccctcactaa 45839292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 18894897 - 18895039
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| || ||||||||||||||| |||| ||||| ||| || |||| ||||||| ||||| | ||||||||||||||||||||||||||| |||||    
T  18894897 ttacactactaggaaaagcaaaattagcgaggaaaattagtgacgaaaaaaataaaatacctcacatattctttggtcgcaaaatttagtgacgaaatta 18894996  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  18894997 gagagggatttcatgttttccctcactaaattttcctcactaa 18895039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 41752562 - 41752433
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| ||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  41752562 aaaagcaaaattagtgacggaaattagtgacggaaaaaataaaatttttcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 41752463  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  41752462 tgttttccctcactaaatatccctcactaa 41752433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 16913586 - 16913716
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||||| ||||||||| ||| ||||||| ||||||||||||| |||||| || |||| |||||||| | |||||||||||||||||||||    
T  16913586 gaaaagcaaaattaggaagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttaataacggaattagagagggatttc 16913685  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||| | ||||||||||||||||    
T  16913686 atgttttccctctctaaatttccctcactaa 16913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 6412063 - 6412192
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||  ||||||| || |||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||||    
T  6412063 aaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaaagagggatttca 6412162  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  6412163 tgttttccctcactaaatatccctcactaa 6412192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9464232 - 9464103
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| || ||||||| ||| ||||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  9464232 aaaagtaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 9464133  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9464132 cgttttccctcacaaaatttccctcactaa 9464103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 20408170 - 20408299
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  20408170 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtaacggaattagagagggatttca 20408269  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  20408270 cgttttccctcacaaaatttccctcactaa 20408299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 52183807 - 52183678
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||  ||||||||||  || ||||||| ||||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  52183807 aaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 52183708  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  52183707 cgttttccctcacaaaatttccctcactaa 52183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 4340547 - 4340424
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||||  ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  4340547 acactattagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 4340448  T
Q  138 gagggatttcatgttttccctcac 161  Q
    ||||||||| | ||||||||||||    
T  4340447 gagggattttacgttttccctcac 4340424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 19865373 - 19865255
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||| ||||| ||| ||||||| || ||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  19865373 aaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 19865274  T
Q  149 tgttttccctcacaaattt 167  Q
    ||||||||||||| |||||    
T  19865273 tgttttccctcactaattt 19865255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 28229465 - 28229583
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |    
T  28229465 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagagggatttta 28229564  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  28229565 cgttttccctcactaattt 28229583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 41071860 - 41071974
Alignment:
Q  64 gagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-a 162  Q
    |||||||||| ||| |||| || || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |    
T  41071860 gagggaaattagtgacggagaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcacta 41071959  T
Q  163 aatttccctcactaa 177  Q
    |||||||||||||||    
T  41071960 aatttccctcactaa 41071974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 46790129 - 46790011
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  46790129 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagaaagggatttta 46790030  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  46790029 cgttttccctcactaattt 46790011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 22158931 - 22158802
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| | ||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  22158931 aaaagtaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 22158832  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  22158831 cgttttccctcacaaaatttccctcactaa 22158802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 22603677 - 22603548
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| |||  |||||| || |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |    
T  22603677 aaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagagagcgatttta 22603578  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  22603577 cgttttccctcactaaatttccctcactaa 22603548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 29549547 - 29549418
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| || |||| |||||||| |||| ||||| ||| ||||| |||||||||||||||||||||||||||||| |    
T  29549547 aaaagcaaaattagcgagggaaattagtgacgaaaaaaataaaatttctcacaaattttttagtcgcgaaatttagtgacggaattagagagggatttta 29549448  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  29549447 cgttttccctcactaaatttccctcactaa 29549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 38531180 - 38531309
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||||||||  ||| ||||||| ||||||||||||| |||||| || ||||||||||||||||| |||||||||||| |||||||    
T  38531180 aaaagtaaaattagggagggaaataagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgatggaattagagagagatttca 38531279  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||| | ||||||||||||||||    
T  38531280 cgttttccctctctaaatttccctcactaa 38531309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 13308820 - 13308948
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||||| |||||  |||||||||||||||||||| | ||||||||    
T  13308820 cactactaggaaaaacaaaattagagagggaaattagtgtccgaaaaaataaaattcctcacaaatttattggtcgcaaaatttagtgatgaaattagag 13308919  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    |||||||||||||||| |||||| |||||    
T  13308920 agggatttcatgtttttcctcactaattt 13308948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 17661189 - 17661050
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||||||  |||||||||||||  || ||||||| ||| ||||||| ||||||||||||| |||||   ||||||||||||||||||| ||||||||||    
T  17661189 cactattagaaaaagcaaaattaacgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgatggaattagag 17661090  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||| |||||| |||||||||||| ||||||||||||||||    
T  17661089 aggaatttcacgttttccctcacaaaatttccctcactaa 17661050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9985337 - 9985466
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||||||||  ||||||||| ||| ||||||| || |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |    
T  9985337 aaaaacaaaattagcaagggaaattagtgacggaaaaaatcaaattcctcacaaattctttggtcgtaaaatttattgacggaattagagagggatttta 9985436  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||||| |||||| ||||||||||||||||    
T  9985437 cgtttttcctcacaaaatttccctcactaa 9985466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 12161943 - 12161814
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||| |||||  || ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  12161943 aaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 12161844  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  12161843 cgttttccctcacaaaatttccctcactaa 12161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 15243214 - 15243085
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||| || ||| |||||| ||| ||||||| || |||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  15243214 aaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagatagggatttca 15243115  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  15243114 cgttttccctcactaaatttccctcactaa 15243085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 18890559 - 18890688
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| |||  |||||| || |||||||||| |||||   ||||||||||||||||| ||||||||||||||||||||||    
T  18890559 aaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttaatggtcgcaaaatttagtaacggaattagagagggatttca 18890658  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||| ||||| ||||||||||||||||    
T  18890659 cgttttctctcacaaaatttccctcactaa 18890688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 23458026 - 23457897
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||| |||||  || ||||||| || |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  23458026 aaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 23457927  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  23457926 cgttttccctcacaaaatttccctcactaa 23457897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 46339455 - 46339564
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||    
T  46339455 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagagagatttca 46339554  T
Q  149 tgttttccct 158  Q
    ||||||||||    
T  46339555 tgttttccct 46339564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 51973553 - 51973428
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||  ||||||| || |||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||||    
T  51973553 aaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcataaaatctatggtcgcaaaatttagtgacggaattagagagaaatttca 51973454  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
      ||||||||||| ||||||||||||    
T  51973453 cattttccctcacaaaatttccctca 51973428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 41120747 - 41120859
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| |||  |||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |    
T  41120747 aaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 41120846  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  41120847 cgttttccctcac 41120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 12989991 - 12989852
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| |||||||||||||| ||| |||||| ||| ||||||| |||||||| |||| |||||| ||||||||||| ||||||||| ||||||| |    
T  12989991 cactactaaaaaaagcaaaattagagagagaaattggtgacggaaaaaataaaatttctcacaaattccttggtcgcaaagtttagtgactgaattaggg 12989892  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    || ||||||| |||||||||| | ||||||||||||||||    
T  12989891 agagatttcacgttttccctctcaaaatttccctcactaa 12989852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 19081867 - 19081728
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||| |||||||| |||||||||| |||  |||||| |||||||| |||| |||||| ||||||| ||||||||||||| |||||||||    
T  19081867 cactactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagag 19081768  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| |||||||||| | ||| ||||||||||||    
T  19081767 agggatttcacgttttccctctctaaaattccctcactaa 19081728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 19129755 - 19129616
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||| |||||||| |||||||||| |||  |||||| |||||||| |||| |||||| ||||||| ||||||||||||| |||||||||    
T  19129755 cactactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagag 19129656  T
Q  139 agggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||| |||||||||| | ||| ||||||||||||    
T  19129655 agggatttcacgttttccctctctaaaattccctcactaa 19129616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 22789607 - 22789730
Alignment:
Q  55 aaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 154  Q
    ||||||||||||| ||||| ||| |||||||||||||||| |||| ||||||  |||||||||||||||||||| |||||||| || ||||||| |||||    
T  22789607 aaaattagggaggaaaattagtgacggaaaacataaaatttctcacaaattccatggtcgcaaaatttagtgactgaattagatagagatttcacgtttt 22789706  T
Q  155 ccctcac-aaatttccctcactaa 177  Q
    ||||| | ||||||||||||||||    
T  22789707 ccctctctaaatttccctcactaa 22789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 50092308 - 50092423
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   || || ||||||||||||||||||||||||||||||||||    
T  50092308 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcacaaaatttagtgacggaattagagagggatttca 50092407  T
Q  149 tgttttccctcacaaa 164  Q
    ||||||||||||||||    
T  50092408 tgttttccctcacaaa 50092423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 7181552 - 7181694
Alignment:
Q  36 ttacactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaatta 135  Q
    |||||||| ||  ||||||||||||||  ||||||||| ||| ||||||| | ||||||||||| | |||   ||||| |||||||||||||||||||||    
T  7181552 ttacactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaagaaaattcctcacatatttcatggtcacaaaatttagtgacggaatta 7181651  T
Q  136 gagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||| || ||||||||||||||||    
T  7181652 gagagggatttcacgttttcccttacaaaatttccctcactaa 7181694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 48522647 - 48522518
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| | ||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||  ||||| ||||||    
T  48522647 aaaagcaaaattagcgaggaaaattagtgacagaaaaaataaaatttctcacaaattttttggtcgcaaaatttagtgacggaatttaagaggaatttca 48522548  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| | || |||||||||||    
T  48522547 tgttttccctcactacatatccctcactaa 48522518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 46785968 - 46786080
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| || ||| |||||||||||||||| |||||||||||||||||||||| |    
T  46785968 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaagttccttggtcgcaaaatttaatgacggaattagagagggatttta 46786067  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  46786068 cgttttccctcac 46786080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 12174808 - 12174903
Alignment:
Q  81 gaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcact 175  Q
    ||||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  12174808 gaaaaaataaaattcctcacaaattccttcgtcgcaaaatttagtgacggaattagagaaggatttcatgttttccctcactaaatatccctcact 12174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 13523002 - 13523100
Alignment:
Q  80 ggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||    
T  13523002 ggaaaaaatataatttctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctcactaa 13523100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 25788007 - 25788105
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| |||| ||||| ||| ||||||| | ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  25788007 aaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttc 25788105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9259193 - 9259322
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||  |||| ||||| ||| ||||||| | |||||| |||| |||||   |||||||||||||||||||||||||||||||| |||||||    
T  9259193 aaaaacaaaattaacgaggaaaattagtgacggaaaaaagaaaatttctcacaaatttcatggtcgcaaaatttagtgacggaattagagagagatttca 9259292  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9259293 cgttttccctcacaaaatttccctcactaa 9259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 17200020 - 17200149
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||  ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||| ||| | |||| |    
T  17200020 aaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacggaattaaagaagaatttta 17200119  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    | |||| |||||| ||||||||||||||||    
T  17200120 tatttttcctcactaaatttccctcactaa 17200149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 41063326 - 41063197
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||| | ||| ||||| ||| ||||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||| ||||| |    
T  41063326 aaaagtaaaattaagaaggaaaattagtgacggaaaaaataaaatccctcacatattctttgatcgcaaaatttagtgacggaattagagagagatttta 41063227  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    |||||| |||||| |||||| |||||||||    
T  41063226 tgtttttcctcactaaattttcctcactaa 41063197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 41359087 - 41358998
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagaggga-tttcatgttttccctcacaaattt 167  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  41359087 cggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttttatgttttccctcactaattt 41358998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 8941004 - 8941122
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| ||| ||| ||||||||| |||||||||||||||| |||| |    
T  8941004 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttgatcgtaaaatttagcgacggaattagagaggaatttta 8941103  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  8941104 cgttttccctcactaattt 8941122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 30928387 - 30928517
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    ||||||||||||||| |||||||||| ||| ||||||| |||||||  || | |||||| ||||||||||||||||||||  |||||||||||  |||||    
T  30928387 gaaaagcaaaattagagagggaaattagtgacggaaaaaataaaatctctaacaaattccttggtcgcaaaatttagtgagagaattagagagaaatttc 30928486  T
Q  148 atgttttccctca-caaatttccctcactaa 177  Q
    |||||||| ||||  |||||| |||||||||    
T  30928487 atgttttcactcagtaaattttcctcactaa 30928517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 12370003 - 12370080
Alignment:
Q  101 aaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||||||||||||||    
T  12370003 aaattctttggtcgcaaaatttagtgacggaattagagaaggattttatgttttcccttactaaatttccctcactaa 12370080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 46865372 - 46865243
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||| |||||||||||||| ||| ||||||| ||||||| ||||| |||||  |||| ||||||||||||| | ||||||||||||||||||||    
T  46865372 aaaagaaaaactagggagggaaattagtgacggaaaaaataaaatccctcacaaatttcttggccgcaaaatttagtaatggaattagagagggatttca 46865273  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     ||| |||||| |  |||||||||||||||    
T  46865272 cgttctccctctctgaatttccctcactaa 46865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 17733962 - 17734093
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaa-tttagtgacggaattagagagggattt 146  Q
    |||||||||||||||||||  || || ||| ||||||| |||||||  |||| |||||  |||||||||||| |||| ||| |||||||| ||| |||||    
T  17733962 gaaaagcaaaattagggagaaaatttagtgacggaaaagataaaatctctcacaaatttcttggtcgcaaaaatttaatgatggaattagcgagagattt 17734061  T
Q  147 catgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||| ||||||||||||||||    
T  17734062 catgttttccctcactaaatttccctcactaa 17734093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 11917925 - 11917805
Alignment:
Q  38 acactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||||||| |||||| |||||||| |||||||||  ||| || |||| | |||||  |||| ||||| |||||||||||||||||||||||||||||||    
T  11917925 acactattaggaaaagaaaaattagagagggaaatcagtgacgaaaaa-acaaaatatctcacaaattatttggtcgcaaaatttagtgacggaattaga 11917827  T
Q  138 gagggatttcatgttttccctc 159  Q
     ||||| |||| ||||||||||    
T  11917826 aagggagttcacgttttccctc 11917805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 32046985 - 32046876
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaattt 167  Q
    ||||| ||| ||||||| || |||||||||| |||||  ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||| | ||||    
T  32046985 aaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgtcggaattagagagagattttacgttttccctcactatattt 32046886  T
Q  168 ccctcactaa 177  Q
    ||||||||||    
T  32046885 ccctcactaa 32046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 9177229 - 9177117
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||  ||||||| || |||||||||| |||||  |||||||||||||||||||||| ||||| |||||||||| |    
T  9177229 aaaaacaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattaaagagggatttta 9177130  T
Q  149 tgttttccctcac 161  Q
     ||||| ||||||    
T  9177129 cgtttttcctcac 9177117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 12806836 - 12806966
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattc-ctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    |||||||| ||||||||| |||||||||||||||| ||| | ||||| | | || || |||| |||||  ||||||| |||||||||||||||||||| |    
T  12806836 cactattaggaaaagcaatattagggagggaaattagtgacagaaaaaaaataaatctctcacaaatttcttggtcgtaaaatttagtgacggaattata 12806935  T
Q  138 gagggatttcatg-ttttccctcacaaattt 167  Q
    ||||||||||| | ||||||||||| |||||    
T  12806936 gagggatttcaagtttttccctcactaattt 12806966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 18787923 - 18788049
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||||| ||||||| ||| || |||| ||||||| |||| |||||| ||||||||||||||||||||||  |||||||||  ||| |||    
T  18787923 aaaagcaaaattagggatggaaattagtgacgaaaaa-ataaaatccctcctaaattttttggtcgcaaaatttagtgac--aattagagattgatgtca 18788019  T
Q  149 tgttttccctc-acaaatttccctcactaa 177  Q
     ||||||||||   ||||||||||||||||    
T  18788020 cgttttccctctttaaatttccctcactaa 18788049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 26825369 - 26825259
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||| ||| ||| | ||||| ||| ||||||| ||||  | ||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  26825369 aaaagcaaagttatggaagaaaattagtgacggaaaaaataacttccctcacaaattctttgatcgtaaaatttagtgacggaattagagaggaatttca 26825270  T
Q  149 tgttttccctc 159  Q
     ||||||||||    
T  26825269 cgttttccctc 26825259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 27253865 - 27253955
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagaga 139  Q
    ||||| ||||||||||||| |||||  || ||||||| |||||||| |||| ||||||  |||||||||||||||||||||||||||||||    
T  27253865 aaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagaga 27253955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 20290331 - 20290459
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || |||||||||| |||||   ||| || ||||||||||||||||||||||||  |||||||    
T  20290331 aaaagtaaaattagcgagggaaattagtgacggaaaa-atgaaattcctcacaaatttcatggccgtaaaatttagtgacggaattagagaatgatttca 20290429  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||| ||||| ||||||| ||||||||    
T  20290430 cgttttctctcacaaaatttctctcactaa 20290459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 49881182 - 49881055
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    |||| ||| |||| ||||||||||| ||| || || ||| ||||||| |||||||   |||||||||| |||||| ||||||||||| || | |||||||    
T  49881182 cactgttaggaaatgcaaaattagg-aggaaagttagtgacggaaaaaataaaatctttcataaattccttggtcacaaaatttagtaacaggattagag 49881084  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    |||||||||||||| |||||||| |||||    
T  49881083 agggatttcatgttatccctcactaattt 49881055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 13195708 - 13195586
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtt 152  Q
    ||||||||||||||||| ||| |||  ||||||  ||||||||||||  ||||| | || |||||||||||||||| |||||||||||||||||    ||    
T  13195708 gcaaaattagggagggagattagtgatggaaaagttaaaattcctcacgaattcctgggacgcaaaatttagtgacagaattagagagggattttgcatt 13195609  T
Q  153 ttccctcac-aaatttccctcac 174  Q
    ||||||| | |||||||||||||    
T  13195608 ttccctctctaaatttccctcac 13195586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 39749072 - 39748950
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| || |||||||||||||| |||| |||||| ||| ||||||| | |||||  |||  || || |||| |||||||||||||||||| |||| |||    
T  39749072 cactactaggaaaagcaaaattaaggagcgaaattagtgacggaaaaaaaaaaatctctcgcaatttgtttgatcgcaaaatttagtgacgaaatttgag 39748973  T
Q  139 agggatttcatgttttccctcac 161  Q
     ||||||||||||||||| ||||    
T  39748972 ggggatttcatgttttccttcac 39748950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 45918913 - 45919026
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    |||| ||||||||||| ||| ||| ||||| ||||||| | | |||| |||||||||||| ||||| |||||||||||| || |||||||||||||||||    
T  45918913 gaaatgcaaaattagg-aggaaaacttgtgacggaaaaaaatgaaatccctcataaattccttggttgcaaaatttagtaacagaattagagagggattt 45919011  T
Q  147 catgttttccctcac 161  Q
     ||||| ||||||||    
T  45919012 gatgttatccctcac 45919026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 20581049 - 20580928
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 137  Q
    ||||| ||| ||||| |||||||| |||||||||| |||  |||||| | | ||||| |||| |||||| || ||||||||||||| | ||| |||||||    
T  20581049 cactactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaaattaaatttctcacaaattccttagtcgcaaaatttaattacgaaattaga 20580950  T
Q  138 gagggatttcatgttttccctc 159  Q
    ||||||||||| ||||||||||    
T  20580949 gagggatttcacgttttccctc 20580928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 16258495 - 16258625
Alignment:
Q  48 gaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| ||| | || || ||| ||||||  |||||||  |||| | |||| ||||| |||||||||||||||||||||| |||||| ||||    
T  16258495 gaaaagcaaaattaaggatgtaatttagtggcggaaagaataaaatatctcacagattccttggttgcaaaatttagtgacggaattatagagggttttc 16258594  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    | ||||| |||| | |||||| |||||||||    
T  16258595 acgtttttcctctctaaattttcctcactaa 16258625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 6776015 - 6775919
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggattt 146  Q
    |||||||||||||| |||||||||  |||  |||||| ||||||| ||||| |||||||||||| |||||| ||||  ||||||||||||||| ||||    
T  6776015 aaaagcaaaattagagagggaaata-gtgatggaaaaaataaaatccctcacaaattctttggttgcaaaacttagcaacggaattagagaggaattt 6775919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14486698 - 14486771
Alignment:
Q  105 tctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||| |||||||||| |||||||||||||||||| ||||||| |||||||||| | |||||| |||||||||    
T  14486698 tctttgatcgcaaaattcagtgacggaattagagagagatttcacgttttccctctctaaattttcctcactaa 14486771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 9882070 - 9882165
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| ||||||| ||||| |||||  ||   ||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||    
T  9882070 aaattagtgacggaaaaaataaaatccctcacaaatttctt---cgcaaaatttagtgacggaattagagaggaatttaatgtttttcctcactaattt 9882165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 177
Target Start/End: Complemental strand, 52621252 - 52621154
Alignment:
Q  80 ggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||||| |||||||  |||||||||| ||| |||  |||||||||||| |||||||| || | |||||||||||| |||||| |||||| |||||||||    
T  52621252 ggaaaaaataaaatctctcataaattatttagtcataaaatttagtgatggaattagtgaagaatttcatgtttttcctcactaaattttcctcactaa 52621154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 30673585 - 30673511
Alignment:
Q  87 ataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac 161  Q
    ||||||| | ||| ||||| |||| ||  |||||||||| |  ||||||||||||||||||||||||||||||||    
T  30673585 ataaaatccttcacaaattttttgctcataaaatttagtaatagaattagagagggatttcatgttttccctcac 30673511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 29093596 - 29093693
Alignment:
Q  81 gaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||| ||||||||||||| || ||| ||  |||||||||||| ||| ||||||||||||| |||| |  |||||| || | ||||||||||||||||    
T  29093596 gaaaaaataaaattcctcacaagttccttaatcgcaaaatttaatgatggaattagagaggaattttacattttccatctctaaatttccctcactaa 29093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 25687355 - 25687397
Alignment:
Q  114 gcaaaatttagtgacggaattagagagggatttcatgttttcc 156  Q
    |||||||||||||| |||||||||||||||| | |||||||||    
T  25687355 gcaaaatttagtgaaggaattagagagggatgtaatgttttcc 25687397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 928 - 1058
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaaca-taaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttc 147  Q
    |||||||||||||| ||||||||||  || ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  928 aaaagcaaaattagcgagggaaattactgacggaaaaaaataaaattcctcataaattccttggtcgcaaaatttagtgacggaattagagagggatttc 1027  T
Q  148 atgttttccctcac-aaatttccctcactaa 177  Q
    |||||||||||||| |||| |||||||||||    
T  1028 atgttttccctcactaaatatccctcactaa 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 7634 - 7505
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |    
T  7634 aaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 7535  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  7534 cgttttccctcactaaatttccctcactaa 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 19732 - 19603
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  19732 aaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 19633  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  19632 tgttttccctcactaaatatccctcactaa 19603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 12781 - 12653
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  12781 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattctatggtcgcaaaatttagtgacggaattagagaggga-ttca 12683  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  12682 cgttttccctcacaaaatttccctcactaa 12653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9239 - 9368
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| |    
T  9239 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaaggatttta 9338  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  9339 cgttttccctcactaaatttccctcactaa 9368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 37797 - 37926
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| |||||||||   |||||||| ||| ||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  37797 aaaaacaaaattagcaggggaaattagtgacggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagagggatttca 37896  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| ||||||||||||||||    
T  37897 tgttttccctcacaaaatttccctcactaa 37926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 26612 - 26483
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  26612 aaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttta 26513  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||| |||||||||||    
T  26512 cgttttccctcactaaatgtccctcactaa 26483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 8120 - 8249
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8120 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 8219  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  8220 tgttttccctcactaaatatccctcactaa 8249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 21852 - 21981
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  21852 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 21951  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| |||||||||||    
T  21952 tgttttccctcactaaatatccctcactaa 21981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 84432 - 84303
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||||||||||||  ||||||||| ||| ||||||| || |||||||||| |||||   ||||| ||||||||||||||||||||||||||||||||||    
T  84432 aaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagagggatttca 84333  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
      ||||||||||| ||||||||||||||||    
T  84332 cattttccctcacaaaatttccctcactaa 84303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 11031 - 10892
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    |||| ||| |||||||||||||||||| ||||||||||| || |||| ||||||||||||| |||||| |||||| |||||||||||||| |||||||||    
T  11031 cactgttaggaaaagcaaaattagggaaggaaatttgtgacgaaaaatataaaattcctcacaaattccttggtcacaaaatttagtgacagaattagag 10932  T
Q  139 agggatttcatgttttccctca-caaatttccctcactaa 177  Q
    ||| |||||||||||| |||||  ||||||||||||||||    
T  10931 aggaatttcatgtttttcctcagtaaatttccctcactaa 10892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 5989 - 6118
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||| ||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |    
T  5989 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagagggatttta 6088  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| ||||||||||||||||    
T  6089 cgttttccctcactaaatttccctcactaa 6118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 3871 - 3746
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||| ||||| ||| ||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  3871 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 3772  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
     |||||||||||| ||||||||||||    
T  3771 cgttttccctcactaaatttccctca 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 202903 - 202774
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||| |    
T  202903 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttta 202804  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  202803 cgttttccctcactaaattttcctcactaa 202774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 276207 - 276273
Alignment:
Q  112 tcgcaaaatttagtgacggaattagagagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  276207 tcgcaaaatttagtgacggaattagagagggatttcacgttttctctcacaaaatttccctcactaa 276273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 15000 - 15112
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| | ||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |    
T  15000 aaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagagggatttta 15099  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  15100 cgttttccctcac 15112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 84684 - 84802
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| | ||||| || |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |    
T  84684 aaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagagggatttta 84783  T
Q  149 tgttttccctcacaaattt 167  Q
     |||||||||||| |||||    
T  84784 cgttttccctcactaattt 84802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 120987 - 121124
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| ||||| |||||||| |||||||||| ||   | |||| |||||||| |||| |||||  |||||||||||||||||||||||||||||||    
T  120987 cactactaaaaaaagtaaaattagagagggaaattagttatgaaaaaaataaaatttctcacaaatttcttggtcgcaaaatttagtgacggaattagag 121086  T
Q  139 agggatttcatgttttccctcac-aaatttccctcact 175  Q
    |||||||||| |||||||||| | ||| ||||||||||    
T  121087 agggatttcacgttttccctctctaaaattccctcact 121124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 219765 - 219636
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| || ||||||| ||| ||||||| || |||||||||| ||||| |||  |||||||||||||| ||||||||||||||||||||||    
T  219765 aaaagcaaaattagcgacggaaattagtgacggaaaaaatgaaattcctcacaaattttttaatcgcaaaatttagtaacggaattagagagggatttca 219666  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||| || ||||||||    
T  219665 tgttttccctcactaaatatctctcactaa 219636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 182659 - 182541
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| ||| ||||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  182659 aaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 182560  T
Q  149 tgttttccctcacaaattt 167  Q
       |||||||||| |||||    
T  182559 caatttccctcactaattt 182541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 215663 - 215784
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagag 138  Q
    ||||| ||| |||||||||||||| ||| |||||| | | ||||||| || |||||||||| |||||| |||||||||||        ||||||||||||    
T  215663 cactactaaaaaaagcaaaattagcgagagaaattagcgacggaaaaaatgaaattcctcacaaattccttggtcgcaaa-------tacggaattagag 215755  T
Q  139 agggatttcatgttttccctcacaaattt 167  Q
    |||||||| | |||||||||||| |||||    
T  215756 agggattttacgttttccctcactaattt 215784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 10673 - 10785
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| || ||||||||||||||||||||||||||||||| |||| |    
T  10673 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagaggaatttta 10772  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  10773 cgttttccctcac 10785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 22340 - 22228
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| ||| || |||| || |||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |    
T  22340 aaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagagggatttta 22241  T
Q  149 tgttttccctcac 161  Q
     ||||||||||||    
T  22240 cgttttccctcac 22228  T

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Target: scaffold0019 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 177
Target Start/End: Complemental strand, 173584 - 173444
Alignment:
Q  39 cactattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaa--ttctttggtcgcaaaatttagtgacggaattag 136  Q
    ||||||||  |||||||||||||| |||| ||||| ||| ||||||| || ||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  173584 cactattagaaaaagcaaaattagcgagg-aaattagtgacggaaaaaatgaaatttctcataaaaattctttggtcgcaaaatttagtgacggaattag 173486  T
Q  137 agagggatttcatgttttccctcac-aaatttccctcactaa 177  Q
    |||| ||||| |||||||||||||| |||| ||| |||||||    
T  173485 agagtgattttatgttttccctcactaaatatccatcactaa 173444  T

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Target: scaffold0655 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 3172 - 3296
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||   |||||||||||||||||||| ||||||| |||||||||||    
T  3172 aaaagaaaaattagggagggaaattagtgacggaaaagataaagttcctcacaaatttcatggtcgcaaaatttagtgacagaattagtgagggatttca 3271  T
Q  149 tgttttccctcacaaatttccctcac 174  Q
     ||||||||||  |||||||||||||    
T  3272 cgttttccctc-taaatttccctcac 3296  T

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Target: scaffold0062 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 44046 - 43917
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||| |||||||||| |||  |||||| || |||||||||| ||||||||||||||||||||||| | ||||||||||||| | |||| |    
T  44046 aaaagaaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaataacggaattagagaagaatttta 43947  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
     |||||||||||| |||||| |||||||||    
T  43946 cgttttccctcactaaattttcctcactaa 43917  T

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Target: scaffold0023 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 39713 - 39842
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| |||||||||| |||  |||||| || |||||||||  |||||   |||| ||||||||||||||||||||||||||| |||||||    
T  39713 aaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcccaaatttcatggttgcaaaatttagtgacggaattagagagagatttca 39812  T
Q  149 tgttttccctca-caaatttccctcactaa 177  Q
     |||||||||||  ||||||||||||||||    
T  39813 cgttttccctcataaaatttccctcactaa 39842  T

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Target: scaffold0035 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 74731 - 74857
Alignment:
Q  53 gcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatg-t 151  Q
    ||||||||||  ||||||||| ||| ||||||| || ||||| |||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||| |    
T  74731 gcaaaattagcaagggaaattagtgacggaaaaaatgaaatttctcacaaattctctggtcgtaaaatttagtgacagaattagagagggatttcatgtt 74830  T
Q  152 tttccctcac-aaatttccctcactaa 177  Q
    |||||||||| |||| ||| |||||||    
T  74831 tttccctcactaaatatccttcactaa 74857  T

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Target: scaffold0161 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 6924 - 6795
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    |||||||||||||| ||||||||||  || ||||||| || |||||| ||  |||||  || || |||||||||| ||||||||||||||||| ||||||    
T  6924 aaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcttcgcaaatttcttcgttgcaaaatttaatgacggaattagagaggaatttca 6825  T
Q  149 tgttttccctcac-aaatttccctcactaa 177  Q
    ||||||||||||| |||||||||| |||||    
T  6824 tgttttccctcactaaatttcccttactaa 6795  T

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Target: scaffold0284 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 1549 - 1647
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| ||||||| |||||||||||| |||||||||||||||||| ||  |||||||||||| ||||||||| |||||||| |||||    
T  1549 aaattagtgacggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtaacataattagagaggggtttcatgttatccctcactaattt 1647  T

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Target: scaffold0184 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 173
Target Start/End: Complemental strand, 7585 - 7460
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| |||||||  |||| ||||| ||| ||||||| || |||||| ||| ||| || || |||||||| ||||||||| |||||||||||||||||||    
T  7585 aaaagtaaaattaacgaggaaaattagtgacggaaaaaatgaaattcttcacaaaatccttagtcgcaaagtttagtgacagaattagagagggatttca 7486  T
Q  149 tgttttccctcac-aaatttccctca 173  Q
     |||||||||||| ||||||||||||    
T  7485 cgttttccctcactaaatttccctca 7460  T

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Target: scaffold0002 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 440092 - 439974
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 148  Q
    ||||| ||||||||  ||| | ||| ||| ||||||| || |||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| |    
T  440092 aaaagtaaaattagcaaggaatattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagagggatttta 439993  T
Q  149 tgttttccctcacaaattt 167  Q
      ||||||||||| |||||    
T  439992 cattttccctcactaattt 439974  T

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Target: scaffold0114 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 36411 - 36313
Alignment:
Q  69 aaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||| ||| ||||||| ||||||| | |||||||||| |||||| ||||||||||| ||  |||||||||| ||||||||||| |||||||| |||||    
T  36411 aaattagtgacggaaaaaataaaatccatcataaattccttggtcacaaaatttagtaacataattagagagagatttcatgttatccctcactaattt 36313  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 17627 - 17705
Alignment:
Q  49 aaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtga 127  Q
    |||| ||||||||| |||||||||| ||| ||||||| || |||||||||| |||||| ||||||||||| ||||||||    
T  17627 aaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaactttagtga 17705  T

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Target: scaffold0211 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 19178 - 19266
Alignment:
Q  79 cggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcacaaattt 167  Q
    ||||||| |||||||  ||||||| ||  |||||||||||||||||  ||  |||||||||||||||||||||| |||||||| |||||    
T  19178 cggaaaaaataaaatctctcataattttcttggtcgcaaaatttagaaacataattagagagggatttcatgttatccctcactaattt 19266  T

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Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 156
Target Start/End: Complemental strand, 22228 - 22112
Alignment:
Q  40 actattaagaaaagcaaaattagggagggaaatttgtgtcggaaaacataaaattcctcataaattctttggtcgcaaaatttagtgacggaattagaga 139  Q
    ||||||| ||||| |||||| ||||||||||||| |||  |||||| |||||||| |||||||||| |||| ||||||| |||| |||   | |||||||    
T  22228 actattaggaaaaacaaaatcagggagggaaattagtgagggaaaaaataaaatttctcataaattttttgatcgcaaactttaatgagaaagttagaga 22129  T
Q  140 gggatttcatgttttcc 156  Q
      |||||||||| ||||    
T  22128 atgatttcatgtgttcc 22112  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 112398 - 112347
Alignment:
Q  108 ttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctc 159  Q
    ||||| |||||||||| |||||||||||||||||||||| | ||||| ||||    
T  112398 ttggttgcaaaatttaatgacggaattagagagggatttaacgtttttcctc 112347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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