View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14996_high_7 (Length: 323)
Name: NF14996_high_7
Description: NF14996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14996_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 2 - 310
Target Start/End: Original strand, 41813377 - 41813683
Alignment:
| Q |
2 |
agagaaaattatgtattagtggccacaaattctctttagtaacatgtatacattgtatatctcttgtaaagttaacaaaattaattaaatgctttgtgca |
101 |
Q |
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| T |
41813377 |
agagaaaattatgtattagtggccacaaatactcttaagtaacatgtatacattgtatatctcttgtaaagttaacaaaattaattaaatgctttgtgca |
41813476 |
T |
|
| Q |
102 |
ttgttttttaataaaatgctttgtttgaataactattgtaaaagaaaattctattataaaagttgatcaatgttaatttcattttgacttttttagttta |
201 |
Q |
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| T |
41813477 |
ttgttttttaataaaatgctttgtttgaataactattgtataagaaaattctattataaaagttgatcaatgttaatttcattttgac--ttttagttta |
41813574 |
T |
|
| Q |
202 |
atttgtatgcaccaatagtcannnnnnnnacacaggatgtccaaatatactagttataatcagattaatcgaaatagaatatggtgaattgattcgcaaa |
301 |
Q |
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| T |
41813575 |
atttgtatgcaccaatagtcattttttttacacaggatgtccaaatatactagttataatcatattaatcgaaatagaatatggtgaattgattcgcaaa |
41813674 |
T |
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| Q |
302 |
gttaatatt |
310 |
Q |
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||||||||| |
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| T |
41813675 |
gttaatatt |
41813683 |
T |
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