View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14999_high_1 (Length: 616)

Name: NF14999_high_1
Description: NF14999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14999_high_1
NF14999_high_1
[»] chr7 (2 HSPs)
chr7 (1-610)||(44501197-44501806)
chr7 (278-366)||(32413624-32413712)
[»] chr3 (12 HSPs)
chr3 (255-460)||(45870386-45870593)
chr3 (273-606)||(20994819-20995154)
chr3 (273-460)||(20981806-20981995)
chr3 (396-451)||(20977477-20977532)
chr3 (257-469)||(45856777-45856991)
chr3 (396-475)||(2996371-2996450)
chr3 (311-366)||(25601740-25601795)
chr3 (396-549)||(20949493-20949649)
chr3 (399-525)||(20948805-20948934)
chr3 (276-334)||(778229-778287)
chr3 (278-359)||(25596902-25596983)
chr3 (401-469)||(45881805-45881873)
[»] chr4 (1 HSPs)
chr4 (255-463)||(3978077-3978287)
[»] chr5 (4 HSPs)
chr5 (269-547)||(7894982-7895264)
chr5 (255-485)||(38142015-38142247)
chr5 (486-560)||(7976609-7976683)
chr5 (255-307)||(7976853-7976905)
[»] chr6 (7 HSPs)
chr6 (257-367)||(33844279-33844389)
chr6 (309-366)||(33840288-33840345)
chr6 (278-366)||(7115536-7115624)
chr6 (278-366)||(7120608-7120696)
chr6 (278-366)||(7124012-7124100)
chr6 (278-334)||(7140758-7140814)
chr6 (278-334)||(8680372-8680428)
[»] chr2 (1 HSPs)
chr2 (279-367)||(43864048-43864136)


Alignment Details
Target: chr7 (Bit Score: 562; Significance: 0; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 562; E-Value: 0
Query Start/End: Original strand, 1 - 610
Target Start/End: Complemental strand, 44501806 - 44501197
Alignment:
Q  1 acaaaagcccatacattatgcaaataaagacacaagcctccatgacatgtttcctatcggactaacccaattagtttgtaacttagtcacaataactcgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44501806 acaaaagcccatacattatgcaaataaagacacaagcctccatgacatgtttcctatcggactaatccaattagtttgtaacttagtcacaataactcgc 44501707  T
Q  101 cgtagatttattcaataacttttaatgcaaaaatataattttgttatgtttttgttccatgattaggttcttatcagaatgtcaagtgagataataattc 200  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44501706 cgtagatttgctcaataacttttaatgcaaaaatataattctgttatgtttttgttccatgattaggtacttatcagaatgtcaagtgagataataattc 44501607  T
Q  201 gaccgacaaagaagaaattaaaactcactgagagtgtaagtaaagactgacttggcgacttacctgactgcattatccttcacatactgtcttttttgaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44501606 gaccgacaaagaagaaattaaaactcactgagagtgtaagtaaagaccgacttggcgacttacctgactgcattatccttcacatactgtcttttttgaa 44501507  T
Q  301 tgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcctgcacttatagcattcttcagattttcacactta 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44501506 tgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcctgcacttatagcattcttcagattttcacacttt 44501407  T
Q  401 caagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactctcaatttcagccataatggtcgcttggagttt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44501406 caagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactctcaatttcagccataatggttgcttggagttt 44501307  T
Q  501 cacctactcaaaaggattgtgaattgtgctattttacacaaagtccagctgtcaggacttagtgtccttgctgacaatgcacaaattccgcctagcatat 600  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44501306 cacctactcaaaaggattgtgaattgtgctatttcacacatagtccagcggtcaggacttagtgtccatgctgacaatgcacaaattccgcctagcatat 44501207  T
Q  601 tttcatctca 610  Q
    ||||||||||    
T  44501206 tttcatctca 44501197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 366
Target Start/End: Original strand, 32413624 - 32413712
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcc 366  Q
    ||||||||||| || | ||||||  ||||| |||| ||||| ||||||||||||||| | ||||||||| |||| ||||| ||||||||    
T  32413624 cttcacatactctcctctttgaacaccaaacacgccgttcaaacttgcattttgtccacaagatggaagaatctctggaagcgtcttcc 32413712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 255 - 460
Target Start/End: Complemental strand, 45870593 - 45870386
Alignment:
Q  255 gcgacttacctgactgcattatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttg 354  Q
    ||||| ||||||||||  ||||||||||||||||||| |||| |||||||||| |||| ||||| |||||| |||| || || ||||  | |||||||||    
T  45870593 gcgacctacctgactgtgttatccttcacatactgtcgttttcgaatgccaaagacgcagttcaaacttgcgttttatcaccaagatatacggatctttg 45870494  T
Q  355 gaaacgtcttcctgcacttata--gcattcttcagattttcacacttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctct 452  Q
    ||||||||||||| | ||||||  |||||||   || ||||  ||||| ||||||||||  | ||| || |||| |||||||||||| |  |||||||||    
T  45870493 gaaacgtcttccttctcttatattgcattctgatgactttcgaacttataagatattcaccagatttgtttctagggttttatctctccgggattcctct 45870394  T
Q  453 atctcact 460  Q
    ||||||||    
T  45870393 atctcact 45870386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 273 - 606
Target Start/End: Complemental strand, 20995154 - 20994819
Alignment:
Q  273 ttatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcctgcact 372  Q
    ||||||||||||| || || ||| ||||  ||||| |||||||||| |||||  |||| ||||| | ||  |||||||||||||||||||||||||| ||    
T  20995154 ttatccttcacattctctcctttctgaacaccaaagacgctgttcaaacttgtgttttatccccaatatataaggatctttggaaacgtcttcctgctct 20995055  T
Q  373 t--atagcattcttcagattttcacacttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactc-t 469  Q
    |  || ||||  |  ||| ||||  |||| |||||||||||  | ||||||||||||| ||||||||||||  ||||||||||||||||| ||  ||| |    
T  20995054 tacattgcataatagagactttcgtactttcaagatattcaccacattcgtgtctaagattttatctcttcgtgattcctctatctcacttcagtctctt 20994955  T
Q  470 caatttcagc--cataatggtcgcttggagtttcacctactcaaaaggattgtgaattgtgctattttacacaaagtccagctgtcaggacttagtgtc- 566  Q
     | |||||||  |||||||| ||||| |||  |||   ||| |||| |||||||||||  ||||||| |||||| ||||||| || |  |||| |||||     
T  20994954 gattttcagcgtcataatggccgctttgagcctca---acttaaaaagattgtgaattacgctatttcacacaatgtccagcagttacaactttgtgtca 20994858  T
Q  567 cttgctgacaatgcacaaattccgcctagcatattttcat 606  Q
    |||| ||||| ||| |||||||| | |||| |||||||||    
T  20994857 cttg-tgacattgcgcaaattcctcatagcttattttcat 20994819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 273 - 460
Target Start/End: Complemental strand, 20981995 - 20981806
Alignment:
Q  273 ttatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcctgcact 372  Q
    ||||||||||||| || || ||| ||||  ||||| | |||||||| |||||  |||| ||||| | ||  || ||||||||||||||||||||||| ||    
T  20981995 ttatccttcacattctctcctttctgaacaccaaacatgctgttcaaacttgtgttttatccccaatatataaagatctttggaaacgtcttcctgctct 20981896  T
Q  373 tata--gcattcttcagattttcacacttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcact 460  Q
    || |  ||||  |  ||| ||||  | || |||||||||||  | ||||||||||||| ||||||||||||  |||||||||||||||||    
T  20981895 tacattgcataatagagactttcgtaatttcaagatattcaccacattcgtgtctaagattttatctcttcgtgattcctctatctcact 20981806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 20977477 - 20977532
Alignment:
Q  396 acttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctc 451  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||| |||||||||    
T  20977477 acttacaagatattcaccaaattcgtgtctaagattttatctcttcgcgattcctc 20977532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 469
Target Start/End: Complemental strand, 45856991 - 45856777
Alignment:
Q  257 gacttacctgactgcattatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttgga 356  Q
    ||||||| |||||  |||||||| ||||||||||||||| |||| || ||| |||| |||   ||||||||||||||||| ||||  |||||||| ||||    
T  45856991 gacttacatgactatattatcctccacatactgtcttttctgaacgctaaagacgcggttggaacttgcattttgtccccaagatacaaggatctctgga 45856892  T
Q  357 aacgtcttcctgcactt--atagcattcttcagattttcacacttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctat 454  Q
    |||  |||||    |||  || |  ||| |  || ||||  |||| |||||||||||  || || ||||||||||||||||||||||  |||||||||||    
T  45856891 aacaacttccaaatcttacattgtgttcctatgactttcgaactttcaagatattcaccaactttgtgtctaaggttttatctcttcgtgattcctctat 45856792  T
Q  455 ctcactacacactct 469  Q
    | |||| ||| ||||    
T  45856791 cgcactccacgctct 45856777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 475
Target Start/End: Complemental strand, 2996450 - 2996371
Alignment:
Q  396 acttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactctcaattt 475  Q
    |||||||||| |||||  ||||| |||||||||||||||||||||  |||||||||||| ||| | || |||||| ||||    
T  2996450 acttacaagaaattcaccaaatttgtgtctaaggttttatctctttgcgattcctctatttcattgcagactctcgattt 2996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 366
Target Start/End: Original strand, 25601740 - 25601795
Alignment:
Q  311 gctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcc 366  Q
    |||||||| ||||||||||||||| | ||||||||| |||||||||||||| ||||    
T  25601740 gctgttcaaacttgcattttgtccacaagatggaagtatctttggaaacgtattcc 25601795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 549
Target Start/End: Original strand, 20949493 - 20949649
Alignment:
Q  396 acttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactc-tcaatttcagc--cataatggtcgct 492  Q
    ||||||||||||||||  ||||||||||||||  |||||||||||   |||||||||||| || || |  ||| | | ||| |||  |||| |||||| |    
T  20949493 acttacaagatattcaccaaattcgtgtctaaaattttatctctttgtgattcctctatcacattataagctcttgattttaagcatcatattggtcgtt 20949592  T
Q  493 tggagtttcacctactcaaaaggattgtgaattgtgctattttacacaaagtccagc 549  Q
    | |||  |||| |||||||||||||||||||||  ||||||  |||||| |||||||    
T  20949593 tagagcctcacatactcaaaaggattgtgaattacgctattaaacacaatgtccagc 20949649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 525
Target Start/End: Original strand, 20948805 - 20948934
Alignment:
Q  399 tacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactctcaatttca---gccataatggtcgcttgg 495  Q
    |||||||||||||  || || ||||||||| ||||||||||||  ||| |||||||| || ||||||||||  |||| |   | |||| || |||||| |    
T  20948805 tacaagatattcaccaagtttgtgtctaagattttatctcttcgtgatccctctatcgcaatacacactcttgattttaagcgtcatattgttcgcttag 20948904  T
Q  496 agtttcacctactcaaaaggattgtgaatt 525  Q
    ||  |||| |||| ||||||||||||||||    
T  20948905 agcctcacatacttaaaaggattgtgaatt 20948934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 778287 - 778229
Alignment:
Q  276 tccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcc 334  Q
    ||||||||||||| ||||||||||| |||||| | || || || |||||||||||||||    
T  778287 tccttcacatactatcttttttgaaagccaaagaggcagtccaaacttgcattttgtcc 778229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 25596902 - 25596983
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaac 359  Q
    ||||||||  |||| ||||||||| ||||  | || ||||| ||||||||||||||  | ||||||||| ||||||||||||    
T  25596902 cttcacattttgtcatttttgaataccaagtatgccgttcaaacttgcattttgtctacgagatggaagaatctttggaaac 25596983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 469
Target Start/End: Complemental strand, 45881873 - 45881805
Alignment:
Q  401 caagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacactct 469  Q
    |||||||||||  ||||| ||||| ||||||||||||||    |||||||||||| |||| ||||||||    
T  45881873 caagatattcaccaaatttgtgtcgaaggttttatctctcagtgattcctctatcacactccacactct 45881805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 255 - 463
Target Start/End: Original strand, 3978077 - 3978287
Alignment:
Q  255 gcgacttacctgactgcattatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttg 354  Q
    |||||||||||||  ||||||| ||||||||||| || ||||| ||  ||||  |||| ||||| |||||| |||| ||| | ||||  |||||||||||    
T  3978077 gcgacttacctgaaagcattattcttcacatactctcgtttttaaacaccaaccacgcggttcaaacttgcgttttatccacaagatataaggatctttg 3978176  T
Q  355 gaaacgtcttcctgcactt--atagcattcttcagattttcacacttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctct 452  Q
    ||||||||||||| | |||  || |||||||||||| |||    ||||||||| |||||  | ||| |||||||| ||||||| ||||| ||||||||||    
T  3978177 gaaacgtcttcctactcttacattgcattcttcagactttggagcttacaagaaattcaccagattagtgtctaaagttttatttcttcgcgattcctct 3978276  T
Q  453 atctcactaca 463  Q
    ||| |||||||    
T  3978277 atcgcactaca 3978287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 269 - 547
Target Start/End: Original strand, 7894982 - 7895264
Alignment:
Q  269 tgcattatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcctg 368  Q
    ||||||||||||||||| || || ||||||||||||||| | || ||||| ||||||||||||||   |||||||||| |||| ||||||| ||| || |    
T  7894982 tgcattatccttcacattctttcctttttgaatgccaaacaagccgttca-acttgcattttgtctatcagatggaagaatctctggaaacttctacccg 7895080  T
Q  369 cactt--atagcattcttcagattttcacacttacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctctatctcactacacac 466  Q
    | |||  ||   ||||| |||||||||    ||||| || |||||  ||||| |||||||||||||||||||||| | |||||||| ||  ||| ||  |    
T  7895081 ctcttagattcgattctacagattttcgattttacacgaaattcacaaaatttgtgtctaaggttttatctcttcgcaattcctctgtcaaactgcaggc 7895180  T
Q  467 tc-tcaattt--cagccataatggtcgcttggagtttcacctactcaaaaggattgtgaattgtgctattttacacaaagtcca 547  Q
    || | |||||   ||| ||  ||||||||| |||  |||| |||||||||| |||||||||| |||||||| |||||| |||||    
T  7895181 tcttgaatttaatagcaatgctggtcgcttagagcctcacttactcaaaagaattgtgaattatgctatttcacacaatgtcca 7895264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 255 - 485
Target Start/End: Complemental strand, 38142247 - 38142015
Alignment:
Q  255 gcgacttacctgactgcattatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttg 354  Q
    ||||||||||||||||  |||||||||||||||| || |||||||| || ||| | || |||   ||||  ||| |||||   ||||||| |||||| ||    
T  38142247 gcgacttacctgactgtgttatccttcacatactctcctttttgaacgctaaacaggcagttacaacttcaattctgtccttaagatggagggatctatg 38142148  T
Q  355 gaaacgtcttcctgcacttata--gcattcttcagattttcacact-tacaagatattcaataaattcgtgtctaaggttttatctcttcacgattcctc 451  Q
    ||||| ||||||||| ||||||  | |||||||||| ||||  ||| |||  ||||||||| |||||||||  || ||||||| ||||||  ||||||||    
T  38142147 gaaacttcttcctgctcttatattggattcttcagactttcgaactatacc-gatattcaacaaattcgtgcatagggttttaactcttcgtgattcctc 38142049  T
Q  452 tatctcactacacactctcaatttcagccataat 485  Q
    | || ||||  || ||||||||||||| ||||||    
T  38142048 tctcgcactgaactctctcaatttcagacataat 38142015  T

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Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 7976683 - 7976609
Alignment:
Q  486 ggtcgcttggagtttcacctactcaaaaggattgtgaattgtgctattttacacaaagtccagctgtcaggactt 560  Q
    |||||||| |||  |||| ||||||||||||||||||||| |||||||| |||||| ||||||| || |||||||    
T  7976683 ggtcgcttagagcctcacttactcaaaaggattgtgaattatgctatttcacacaatgtccagcggttaggactt 7976609  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 7976905 - 7976853
Alignment:
Q  255 gcgacttacctgactgcattatccttcacatactgtcttttttgaatgccaaa 307  Q
    |||||||||| || ||||||||||||||||| || || |||||||| ||||||    
T  7976905 gcgacttacccgaatgcattatccttcacattctctcctttttgaacgccaaa 7976853  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 257 - 367
Target Start/End: Complemental strand, 33844389 - 33844279
Alignment:
Q  257 gacttacctgactgcattatccttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttgga 356  Q
    |||||||| ||||||||| |  || ||||  |||| ||||||||  || ||||||| ||||| ||||||||||||||| ||||||||||  |||| ||||    
T  33844389 gacttacccgactgcattcttatttacattttgtcatttttgaaaaccgaaaacgccgttcaaacttgcattttgtccaccagatggaaacatctctgga 33844290  T
Q  357 aacgtcttcct 367  Q
    ||||| |||||    
T  33844289 aacgtattcct 33844279  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 33840345 - 33840288
Alignment:
Q  309 acgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcc 366  Q
    |||||||||  ||||||||||||||| ||||||||||  |||||||||||||| ||||    
T  33840345 acgctgttcgaacttgcattttgtccaccagatggaaacatctttggaaacgtattcc 33840288  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 7115624 - 7115536
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcc 366  Q
    ||||||||||| |||||||||||  ||||| |||| ||||| |||||  ||||||||   ||||||||| |||| |||||  |||||||    
T  7115624 cttcacatactctcttttttgaacaccaaatacgcagttcaaacttgtgttttgtccaaaagatggaagaatctctggaagtgtcttcc 7115536  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 7120696 - 7120608
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcc 366  Q
    ||||||||||| |||||||||||  ||||| |||| ||||| |||||  ||||||||   ||||||||| |||| |||||  |||||||    
T  7120696 cttcacatactctcttttttgaacaccaaatacgcagttcaaacttgtgttttgtccaaaagatggaagaatctctggaagtgtcttcc 7120608  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 7124100 - 7124012
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcc 366  Q
    ||||||||||| |||||||||||  ||||| |||| ||||| |||||  ||||||||   ||||||||| |||| |||||  |||||||    
T  7124100 cttcacatactctcttttttgaacaccaaatacgcagttcaaacttgtgttttgtccaaaagatggaagaatctctggaagtgtcttcc 7124012  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 7140814 - 7140758
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcc 334  Q
    ||||||||||| |||||||||||| | ||| |||| ||||| ||||| |||||||||    
T  7140814 cttcacatactctcttttttgaatactaaatacgcagttcaaacttgtattttgtcc 7140758  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 8680428 - 8680372
Alignment:
Q  278 cttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcc 334  Q
    ||||||||||| |||||||||||| | ||| |||| ||||| ||||| |||||||||    
T  8680428 cttcacatactctcttttttgaatactaaatacgcagttcaaacttgtattttgtcc 8680372  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 43864136 - 43864048
Alignment:
Q  279 ttcacatactgtcttttttgaatgccaaaaacgctgttcagacttgcattttgtcccccagatggaaggatctttggaaacgtcttcct 367  Q
    ||||||||||||| ||||||||||| ||||| || ||||| |||||||||||||||   |||||||   ||||||||||  ||||||||    
T  43864136 ttcacatactgtcctttttgaatgcaaaaaaggccgttcaaacttgcattttgtccaaaagatggatcaatctttggaagagtcttcct 43864048  T

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