View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14999_low_11 (Length: 359)
Name: NF14999_low_11
Description: NF14999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14999_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 57 - 293
Target Start/End: Complemental strand, 36152440 - 36152209
Alignment:
| Q |
57 |
caacgtggaaaaggaaatatagacccaaagctataccactaaataaatttgagagtatggaagttccttcacatgtggttcaggtaattaagtccacaat |
156 |
Q |
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| T |
36152440 |
caacgtggaaaaggaaatatagacccaaagctataccactaaataaatttgagagtatggaagttccttcacatgtggttcaggtaattaagtccacaat |
36152341 |
T |
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| Q |
157 |
atactaacatttaggaccta-gacctacttccttgtggtacttggcaatgcatatatctggcagtgtccgtaggaaaaagacacctaaaccaactatgta |
255 |
Q |
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| T |
36152340 |
atactaacattaa-----taggacctacttccttgtggtacttggcaatgcatatatctggcagtgtccgtaggaaaaagacacctaaaccaactatgta |
36152246 |
T |
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| Q |
256 |
cgtgatgtacaaatttgattatataaaccattaaaaaa |
293 |
Q |
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| T |
36152245 |
cgtgatgtacaaa-ttgattatgtaaaccattaaaaaa |
36152209 |
T |
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