View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14999_low_2 (Length: 605)

Name: NF14999_low_2
Description: NF14999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14999_low_2
NF14999_low_2
[»] chr6 (20 HSPs)
chr6 (196-591)||(20226745-20227146)
chr6 (196-591)||(22120729-22121130)
chr6 (10-192)||(20227185-20227382)
chr6 (10-192)||(22121169-22121366)
chr6 (196-289)||(33107361-33107454)
chr6 (194-290)||(20824593-20824689)
chr6 (196-283)||(6162688-6162775)
chr6 (196-283)||(14257149-14257236)
chr6 (195-260)||(14257577-14257642)
chr6 (195-252)||(20824197-20824254)
chr6 (195-287)||(33106927-33107020)
chr6 (196-289)||(34984545-34984637)
chr6 (195-250)||(6162280-6162335)
chr6 (195-290)||(15147713-15147808)
chr6 (195-250)||(20228234-20228289)
chr6 (195-250)||(22122218-22122273)
chr6 (197-288)||(20522157-20522248)
chr6 (195-250)||(15148148-15148203)
chr6 (197-244)||(19595650-19595697)
chr6 (195-244)||(20521227-20521276)
[»] chr1 (20 HSPs)
chr1 (123-260)||(8997366-8997519)
chr1 (196-283)||(30428105-30428192)
chr1 (196-253)||(9122717-9122774)
chr1 (196-289)||(17968033-17968126)
chr1 (194-283)||(40124505-40124594)
chr1 (195-283)||(32266485-32266573)
chr1 (196-283)||(47410854-47410941)
chr1 (194-283)||(32266912-32267001)
chr1 (195-260)||(47410448-47410513)
chr1 (195-283)||(9123115-9123203)
chr1 (195-251)||(40124110-40124166)
chr1 (196-288)||(45230561-45230653)
chr1 (198-244)||(12868475-12868521)
chr1 (195-252)||(30427706-30427764)
chr1 (195-253)||(46802354-46802412)
chr1 (195-250)||(45230164-45230220)
chr1 (195-290)||(46802752-46802847)
chr1 (195-252)||(17968467-17968525)
chr1 (202-242)||(45665947-45665987)
chr1 (194-244)||(1500979-1501029)
[»] chr3 (27 HSPs)
chr3 (195-289)||(46689678-46689772)
chr3 (195-283)||(4199455-4199543)
chr3 (195-283)||(42606710-42606798)
chr3 (195-283)||(4199885-4199973)
chr3 (196-288)||(34949753-34949845)
chr3 (196-288)||(36899251-36899343)
chr3 (195-289)||(22406838-22406933)
chr3 (195-252)||(27475728-27475786)
chr3 (196-253)||(42606312-42606369)
chr3 (196-289)||(45539640-45539733)
chr3 (194-283)||(46690111-46690200)
chr3 (195-291)||(45539203-45539299)
chr3 (196-287)||(2388630-2388721)
chr3 (200-283)||(27475392-27475475)
chr3 (195-260)||(2389062-2389127)
chr3 (196-289)||(22407274-22407367)
chr3 (195-260)||(36899684-36899749)
chr3 (195-250)||(34950186-34950242)
chr3 (195-242)||(20826772-20826819)
chr3 (196-242)||(20831101-20831147)
chr3 (194-230)||(7248487-7248523)
chr3 (195-235)||(35300795-35300835)
chr3 (196-244)||(51587571-51587619)
chr3 (195-244)||(54589574-54589624)
chr3 (197-230)||(48867706-48867739)
chr3 (197-230)||(48868588-48868621)
chr3 (197-288)||(43933437-43933529)
[»] chr5 (31 HSPs)
chr5 (196-289)||(3192231-3192324)
chr5 (195-289)||(39402208-39402302)
chr5 (195-252)||(39402644-39402701)
chr5 (195-261)||(3191822-3191888)
chr5 (195-288)||(5747191-5747284)
chr5 (195-288)||(6543412-6543505)
chr5 (194-283)||(31162850-31162939)
chr5 (195-283)||(21949402-21949490)
chr5 (194-289)||(28641157-28641252)
chr5 (195-253)||(28641591-28641649)
chr5 (194-290)||(5746756-5746852)
chr5 (194-290)||(6543844-6543939)
chr5 (196-288)||(31093427-31093519)
chr5 (195-251)||(31162455-31162511)
chr5 (196-298)||(718224-718327)
chr5 (196-283)||(3879204-3879291)
chr5 (195-288)||(19353068-19353162)
chr5 (195-253)||(21949830-21949888)
chr5 (195-242)||(119054-119101)
chr5 (194-252)||(31093028-31093087)
chr5 (198-244)||(119226-119272)
chr5 (195-252)||(3878805-3878863)
chr5 (194-244)||(19352513-19352563)
chr5 (196-244)||(30351704-30351752)
chr5 (195-242)||(119957-120004)
chr5 (203-242)||(35373682-35373721)
chr5 (203-242)||(35383474-35383513)
chr5 (198-244)||(119786-119832)
chr5 (196-230)||(14626089-14626123)
chr5 (197-242)||(4187837-4187882)
chr5 (196-244)||(4186796-4186844)
[»] chr7 (17 HSPs)
chr7 (196-261)||(29783959-29784024)
chr7 (195-283)||(18443178-18443266)
chr7 (195-283)||(18443608-18443696)
chr7 (195-252)||(29784378-29784435)
chr7 (196-288)||(1244443-1244535)
chr7 (196-288)||(41298676-41298768)
chr7 (196-283)||(28898031-28898118)
chr7 (195-283)||(41298246-41298335)
chr7 (195-290)||(884677-884773)
chr7 (195-290)||(1244006-1244102)
chr7 (195-252)||(28898459-28898517)
chr7 (195-260)||(22954071-22954136)
chr7 (196-253)||(33847898-33847955)
chr7 (194-244)||(30939562-30939612)
chr7 (195-253)||(33848296-33848354)
chr7 (203-283)||(23548841-23548922)
chr7 (194-230)||(27310103-27310139)
[»] chr4 (40 HSPs)
chr4 (195-296)||(31228309-31228410)
chr4 (195-283)||(28505211-28505299)
chr4 (195-289)||(2669003-2669097)
chr4 (196-289)||(43979989-43980082)
chr4 (195-283)||(21235030-21235118)
chr4 (195-283)||(28957741-28957829)
chr4 (195-283)||(38026106-38026194)
chr4 (195-287)||(55347559-55347651)
chr4 (196-283)||(2669438-2669525)
chr4 (196-283)||(12922644-12922731)
chr4 (195-261)||(12923072-12923139)
chr4 (194-289)||(28957307-28957402)
chr4 (196-283)||(30546146-30546233)
chr4 (194-283)||(31227881-31227970)
chr4 (196-252)||(12108289-12108345)
chr4 (195-290)||(30545708-30545804)
chr4 (196-244)||(54167536-54167584)
chr4 (90-188)||(12107838-12107937)
chr4 (195-250)||(38025711-38025766)
chr4 (196-283)||(40841464-40841551)
chr4 (195-252)||(1317093-1317151)
chr4 (195-253)||(40841892-40841950)
chr4 (195-252)||(43979590-43979648)
chr4 (195-252)||(46263065-46263123)
chr4 (197-253)||(55347970-55348026)
chr4 (196-283)||(789897-789984)
chr4 (195-242)||(47053805-47053852)
chr4 (195-252)||(790325-790383)
chr4 (195-261)||(21235460-21235526)
chr4 (203-283)||(5545018-5545099)
chr4 (197-242)||(17287531-17287576)
chr4 (197-242)||(49426353-49426398)
chr4 (144-188)||(49424580-49424624)
chr4 (197-284)||(12107707-12107794)
chr4 (196-230)||(47058507-47058541)
chr4 (196-230)||(54168823-54168857)
chr4 (197-230)||(17288374-17288407)
chr4 (197-242)||(29691913-29691958)
chr4 (197-261)||(54142349-54142414)
chr4 (208-244)||(5544826-5544862)
[»] chr2 (26 HSPs)
chr2 (195-252)||(26525495-26525552)
chr2 (194-290)||(1804227-1804323)
chr2 (196-288)||(12090126-12090218)
chr2 (196-260)||(39096549-39096613)
chr2 (195-290)||(11451186-11451281)
chr2 (195-288)||(1804662-1804755)
chr2 (195-292)||(27377642-27377739)
chr2 (195-252)||(34038251-34038308)
chr2 (195-283)||(6476089-6476177)
chr2 (195-283)||(6476517-6476605)
chr2 (192-283)||(26525890-26525982)
chr2 (195-283)||(39096956-39097044)
chr2 (196-283)||(3854498-3854585)
chr2 (195-250)||(12089729-12089785)
chr2 (196-260)||(34037834-34037898)
chr2 (194-289)||(11450752-11450847)
chr2 (195-252)||(3854099-3854157)
chr2 (195-260)||(10709500-10709566)
chr2 (195-252)||(22701545-22701603)
chr2 (196-242)||(44930027-44930073)
chr2 (194-283)||(27378078-27378167)
chr2 (203-283)||(32861047-32861128)
chr2 (195-242)||(44934682-44934729)
chr2 (195-242)||(10708067-10708114)
chr2 (195-242)||(39947085-39947132)
chr2 (196-244)||(23221876-23221924)
[»] chr8 (10 HSPs)
chr8 (196-283)||(12734175-12734262)
chr8 (196-283)||(29917538-29917625)
chr8 (196-288)||(29917102-29917194)
chr8 (195-252)||(12734603-12734661)
chr8 (197-283)||(9800344-9800431)
chr8 (195-250)||(24845998-24846053)
chr8 (196-288)||(26720318-26720411)
chr8 (203-283)||(44024400-44024481)
chr8 (196-244)||(4624575-4624623)
chr8 (195-230)||(4624416-4624451)
[»] scaffold0085 (2 HSPs)
scaffold0085 (194-288)||(39418-39512)
scaffold0085 (195-288)||(39851-39944)
[»] scaffold0148 (2 HSPs)
scaffold0148 (195-242)||(29318-29365)
scaffold0148 (196-242)||(32994-33040)


Alignment Details
Target: chr6 (Bit Score: 295; Significance: 1e-165; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 196 - 591
Target Start/End: Complemental strand, 20227146 - 20226745
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctttattctt 295  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |   |||||||||||||||||||||||||||||    
T  20227146 aaaaatataggaattttaaaaatatttattgaaatataggaactattctcaaaatcgcgcaaaatatagagagcaaaaatatatttaatcctttattctt 20227047  T
Q  296 ttatcaaacgctaaattgagacaagatatatgatacaatgaacttatggtatctcttatcgtgattactattctaatgagttttctattatatggaagtg 395  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  20227046 ttataaaacgctaaattgagacaagaaatatgatacaatgaacttatcgtatctctcatcgggattactattctaatgagttttctgttatatggaagtg 20226947  T
Q  396 ttaaatagagcagaagcacgagggccatcaagttcaagaatgaactgatacgaggtcctgtagatta------aaagttccaatattggtgaatttgttg 489  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||       ||||||||||||||||||||||||||    
T  20226946 ttaaatagagcagaagcacgacggccatcaagttcaagaatgaacagatacgaggtcccgtagattatcctttcaagttccaatattggtgaatttgttg 20226847  T
Q  490 catatatctaaacttggcagcttgctattagctagtatacgttgttgtgatatatttctctatgtgagtgacattgagaggatacaagtgtgtctcattt 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  20226846 catatatctaaacttggcagcttgctattagctagtatacgttgttgtgatagatttctctatgtgagtgccattgagaggatacaagtgtgtctcattt 20226747  T
Q  590 tt 591  Q
    ||    
T  20226746 tt 20226745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 196 - 591
Target Start/End: Complemental strand, 22121130 - 22120729
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctttattctt 295  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |   |||||||||||||||||||||||||||||    
T  22121130 aaaaatataggaattttaaaaatatttattgaaatataggaactattctcaaaatcgcgcaaaatatagagagcaaaaatatatttaatcctttattctt 22121031  T
Q  296 ttatcaaacgctaaattgagacaagatatatgatacaatgaacttatggtatctcttatcgtgattactattctaatgagttttctattatatggaagtg 395  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  22121030 ttataaaacgctaaattgagacaagaaatatgatacaatgaacttatcgtatctctcatcgggattactattctaatgagttttctgttatatggaagtg 22120931  T
Q  396 ttaaatagagcagaagcacgagggccatcaagttcaagaatgaactgatacgaggtcctgtagatta------aaagttccaatattggtgaatttgttg 489  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||       ||||||||||||||||||||||||||    
T  22120930 ttaaatagagcagaagcacgacggccatcaagttcaagaatgaacagatacgaggtcccgtagattatcctttcaagttccaatattggtgaatttgttg 22120831  T
Q  490 catatatctaaacttggcagcttgctattagctagtatacgttgttgtgatatatttctctatgtgagtgacattgagaggatacaagtgtgtctcattt 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  22120830 catatatctaaacttggcagcttgctattagctagtatacgttgttgtgatagatttctctatgtgagtgccattgagaggatacaagtgtgtctcattt 22120731  T
Q  590 tt 591  Q
    ||    
T  22120730 tt 22120729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 20227382 - 20227185
Alignment:
Q  10 atgaacacaaaagctgaagggatgattggttatcaactggaatggaacttgcagcaa---tggccatgctggagaaggaaa------------cacgggt 94  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||            |||||||    
T  20227382 atgaacgcaaaagctgaagggatgattggttatcgactggaatggaacttgcagcaacaatggccatgctggagaaggaaaaaaaaagatgaacacgggt 20227283  T
Q  95 caaatcaaattatttgccccaaacctggttttaatttttacaaagaatataaataaaataaatatattgccacgtcagcattctgtttgcttattagg 192  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| || || |||| ||| ||||||  || |||||||||    
T  20227282 caaatcaaattatttgcctcaaacccggttttaatttttccaaagaatataaataaaataaaaatctttccacatcaacattctactttcttattagg 20227185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 22121366 - 22121169
Alignment:
Q  10 atgaacacaaaagctgaagggatgattggttatcaactggaatggaacttgcagcaa---tggccatgctggagaaggaaa------------cacgggt 94  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||            |||||||    
T  22121366 atgaacgcaaaagctgaagggatgattggttatcgactggaatggaacttgcagcaacaatggccatgctggagaaggaaaaaaaaagatgaacacgggt 22121267  T
Q  95 caaatcaaattatttgccccaaacctggttttaatttttacaaagaatataaataaaataaatatattgccacgtcagcattctgtttgcttattagg 192  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| || || |||| ||| ||||||  || |||||||||    
T  22121266 caaatcaaattatttgcctcaaacccggttttaatttttccaaagaatataaataaaataaaaatctttccacatcaacattctactttcttattagg 22121169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 33107361 - 33107454
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| |||||    
T  33107361 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccttt 33107454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 20824593 - 20824689
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| |||||||| ||||||    
T  20824593 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttta 20824689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 6162688 - 6162775
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| ||   ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  6162688 aaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 6162775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 14257236 - 14257149
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  14257236 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 14257149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 14257577 - 14257642
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||| ||| |||||    
T  14257577 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaat 14257642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 20824254 - 20824197
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| || | ||||||||||||||||    
T  20824254 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcg 20824197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 33107020 - 33106927
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcct 287  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||  ||||| | | | | |||||| ||||||||||||    
T  33107020 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaatcct 33106927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 34984545 - 34984637
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    ||||||||||| |||||||||| |||||||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| |||||    
T  34984545 aaaaatgtagg-attttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccttt 34984637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 6162335 - 6162280
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaat 250  Q
    ||||||||||||||||||||||| |||||||||||| |||  ||||||||||||||    
T  6162335 gaaaaatgtagggattttaaaaacatttattgaaatgtaatgactattctcaaaat 6162280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 15147808 - 15147713
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||||||| |||||||||||| || | | ||||||| |||||||  |||||| | | | |||||| |||||||| ||||||    
T  15147808 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctctaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttta 15147713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 20228234 - 20228289
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaat 250  Q
    ||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||    
T  20228234 gaaaaatgtagggattttaaaaacatttattaaaatgtaggaactattctcaaaat 20228289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 22122218 - 22122273
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaat 250  Q
    ||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||    
T  22122218 gaaaaatgtagggattttaaaaacatttattaaaatgtaggaactattctcaaaat 22122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 20522157 - 20522248
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    ||||||||| ||||||||||| |||||||||||| || | ||||||| |||||||||  ||||||| | ||| |||||| |||||||| ||||    
T  20522157 aaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaaatcg-tcaaaatgtaggaaccaaaaacatatttaaccctt 20522248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 15148148 - 15148203
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaat 250  Q
    ||||||||||||||||||||||  |||||||||||| || | |||||| |||||||    
T  15148148 gaaaaatgtagggattttaaaatcatttattgaaatgtagggactattatcaaaat 15148203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 19595650 - 19595697
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    ||||| |||||||||||||||||||||||||||| || | ||||||||    
T  19595650 aaaatatagggattttaaaaatatttattgaaatgtagggactattct 19595697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 20521276 - 20521227
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    ||||| ||||||||||||||||| |||| |||||||||| | ||||||||    
T  20521276 gaaaattgtagggattttaaaaacattttttgaaatatagggactattct 20521227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 8997519 - 8997366
Alignment:
Q  123 ttttaatttttacaaagaatataaa-taaaataaatatattgccacgtcagcattctgtttgcttattaggga---------------gaaaaatgtagg 206  Q
    ||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||| |               ||||||||||||    
T  8997519 ttttaatttttacaaggaatataaaataaaataaaaatattgtcacgtcagcattttgtttgcttattaggcaaaaagagacaacatggaaaaatgtagg 8997420  T
Q  207 gattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||||||| |||||||||||| || | ||||||||||||||||||||||||    
T  8997419 gattttaaaaacatttattgaaatgtagggactattctcaaaatcgcacaaaat 8997366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 30428105 - 30428192
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  30428105 aaaaatgtagggattttaaaaacattcattgaaatgtaggaactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 30428192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 9122774 - 9122717
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  9122774 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgc 9122717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 17968126 - 17968033
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| |||||    
T  17968126 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccttt 17968033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 40124505 - 40124594
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||||||||||||    
T  40124505 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaatatatttaa 40124594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 32266573 - 32266485
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  32266573 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 32266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 47410854 - 47410941
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  47410854 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 47410941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 32266912 - 32267001
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| ||||||||    
T  32266912 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 32267001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 47410513 - 47410448
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||| ||| |||||    
T  47410513 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaat 47410448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 9123115 - 9123203
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| ||   |||||||||||||| ||| |||||| | | | |||||| ||||||||    
T  9123115 gaaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaattgcataaaatgtagggaccaaaaacatatttaa 9123203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 40124166 - 40124110
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatc 251  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||    
T  40124166 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatc 40124110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 45230561 - 45230653
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||| ||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| ||||    
T  45230561 aaaaatatagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccctt 45230653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 12868521 - 12868475
Alignment:
Q  198 aaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||    
T  12868521 aaatgtagggattttaaaaatatttattgaaatgtaggaactattct 12868475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 30427764 - 30427706
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  30427764 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 30427706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 46802412 - 46802354
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    |||||||||||||||||||||||  ||||||||||| || | |||||||||||||||||    
T  46802412 gaaaaatgtagggattttaaaaacttttattgaaatgtagggactattctcaaaatcgc 46802354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 45230220 - 45230164
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaat 250  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  45230220 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaat 45230164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 46802752 - 46802847
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||||||| ||||||| |||| || | |||||| ||||||| | | |||||| | | | |||||| |||||||| ||||||    
T  46802752 gaaaaatgtagggattttaaaaacatttattaaaatgtagggactattttcaaaattgtataaaatgtagggaccaaaaacatatttaacccttta 46802847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 17968467 - 17968525
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||  ||| |||||||||||||    
T  17968467 gaaaaatgtagggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcg 17968525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 45665947 - 45665987
Alignment:
Q  202 gtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  45665947 gtagggattttaaaaatatttattgaaacgtaagaactatt 45665987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 1500979 - 1501029
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||||||| ||||| |||||| || | ||||||||    
T  1500979 agaaaaatgtagggattttaaaaacatttaatgaaatgtagggactattct 1501029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 46689772 - 46689678
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||| |||||| | ||| |||||| |||||||| |||||    
T  46689772 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcataaaatgtaggaaccaaaaacatatttaacccttt 46689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 4199543 - 4199455
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| | | | |||||| ||||||||    
T  4199543 gaaaaatgtagggattttaaaaacatttattgaaatataaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 4199455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 42606710 - 42606798
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||||||||||||||| || | |||||||||||||| ||| |||||| | | | |||||| ||||||||    
T  42606710 gaaaaatgtagggattttaaaaatatttattgaaatgtagggactattctcaaaattgcataaaatgtagggaccaaaaacatatttaa 42606798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 4199885 - 4199973
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||| ||||||||||||||| |||||||||||| || | ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  4199885 gaaaaatatagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 4199973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 34949845 - 34949753
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| ||||    
T  34949845 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccctt 34949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 36899343 - 36899251
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||    
T  36899343 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 36899251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 22406933 - 22406838
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||  ||||| | ||| | |||||| |||||||| |||||    
T  22406933 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaacccttt 22406838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 27475728 - 27475786
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  27475728 gaaaaatgtagggattttaaaaacatttattgaaatataaggactaattctcaaaatcg 27475786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 42606369 - 42606312
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||||||    
T  42606369 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgc 42606312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 45539640 - 45539733
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||| ||||||||  |||||| | | | |||||| |||||||| |||||    
T  45539640 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttt 45539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 46690111 - 46690200
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| ||||||||    
T  46690111 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 46690200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 45539299 - 45539203
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctttat 291  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||| ||||||||  |||||| | | | |||||| ||| |||| |||||||    
T  45539299 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacataattaaccctttat 45539203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 2388721 - 2388630
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcct 287  Q
    |||||||||||||||||||||| |||||||||||| ||   |||||||||||||||||  |||||| | | | |||||| |||||| |||||    
T  2388721 aaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttgatcct 2388630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 27475475 - 27475392
Alignment:
Q  200 atgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 27475392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 2389062 - 2389127
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||||||||||||||||||| ||||||| |||| || | |||||||||||||| ||| |||||    
T  2389062 gaaaaatgtagggattttaaaaacatttattaaaatgtagggactattctcaaaattgcataaaat 2389127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 22407274 - 22407367
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||| ||| |||||||| || | |||||| ||||||| || ||||||| | | | |||||| |||||||| |||||    
T  22407274 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattttcaaaattgcgcaaaatgtagggaccaaaaacatatttaacccttt 22407367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 36899684 - 36899749
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||| ||||||||||||||| |||||||||||| || | |||||||||||||| ||| |||||    
T  36899684 gaaaaatatagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaat 36899749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 34950186 - 34950242
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaat 250  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  34950186 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaat 34950242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 20826819 - 20826772
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  20826819 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 20826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 20831101 - 20831147
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||    
T  20831101 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 20831147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 7248487 - 7248523
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaat 230  Q
    |||||||||||||||||||||||||||||||| ||||    
T  7248487 agaaaaatgtagggattttaaaaatatttattaaaat 7248523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 35300835 - 35300795
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataag 235  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  35300835 gaaaaatgtagggattttaaaaacatttattgaaatgtaag 35300795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 51587619 - 51587571
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||| |||||||||||||||||||||||||||| |||  ||||||||    
T  51587619 aaaaatatagggattttaaaaatatttattgaaatgtaatgactattct 51587571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 54589574 - 54589624
Alignment:
Q  195 gaaaaatgtagggattttaaaaata-tttattgaaatataagaactattct 244  Q
    ||||||||||||||||||||||||| ||| |||||||||| | ||||||||    
T  54589574 gaaaaatgtagggattttaaaaatatttttttgaaatatagggactattct 54589624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 48867739 - 48867706
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaat 230  Q
    |||||||| |||||||||||||||||||||||||    
T  48867739 aaaatgtaaggattttaaaaatatttattgaaat 48867706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 48868588 - 48868621
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaat 230  Q
    ||||||||||||||||||||| ||||||||||||    
T  48868588 aaaatgtagggattttaaaaacatttattgaaat 48868621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 43933529 - 43933437
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||  |||||||||||||||||| |||||| || | ||||||| |||||   |||||||||| ||| |  |||||||||||||| ||||    
T  43933529 aaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaaatatatttaaccctt 43933437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 3192231 - 3192324
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||  | | | |||||| |||||||| |||||    
T  3192231 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgcacaaaatatagggaccaaaaacatatttaacccttt 3192324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 39402302 - 39402208
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    ||||||||||||||||||||||| |||||||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| |||||    
T  39402302 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccttt 39402208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 39402644 - 39402701
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcg 252  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  39402644 gaaaaatgtagggattttaaaaatatttattgaaatgtaaggactattctcaaaatcg 39402701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 3191888 - 3191822
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatg 261  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||  |||||||    
T  3191888 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatg 3191822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 5747191 - 5747284
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||    
T  5747191 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 5747284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 6543505 - 6543412
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||    
T  6543505 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 6543412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 31162850 - 31162939
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||| |||||||||||| |||| | |||||||||||||||  |||||| | | | |||||| ||||||||    
T  31162850 agaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31162939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 21949490 - 21949402
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  21949490 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 21949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 194 - 289
Target Start/End: Complemental strand, 28641252 - 28641157
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| |||||||| |||||    
T  28641252 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttt 28641157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 28641591 - 28641649
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||    
T  28641591 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgc 28641649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 5746852 - 5746756
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||| |||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| |||||||| ||||||    
T  5746852 agaaaaatgtagggatttttaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttta 5746756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 6543844 - 6543939
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  ||||||  || | |||||| |||||||| ||||||    
T  6543844 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatg-taggaccaaaaacatatttaacccttta 6543939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 31093427 - 31093519
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| ||| |||||||| || | |||||| |||||||||| ||||||| | | | |||||| |||||||| ||||    
T  31093427 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccctt 31093519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 31162511 - 31162455
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatc 251  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||    
T  31162511 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatc 31162455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 718224 - 718327
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactatt-ctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctttattct 294  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||  |||||||    ||||||| | ||| |||||| |||||||| |||||||| |    
T  718224 aaaaatgcagggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaaccctttatttt 718323  T
Q  295 ttta 298  Q
    ||||    
T  718324 ttta 718327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 3879204 - 3879291
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||| ||||||||||||||| ||| |||||||| || | | ||||||||||||||| ||||||| | | | |||||||||||||||    
T  3879204 aaaaatatagggattttaaaaacattcattgaaatgtagggattattctcaaaatcgcgcaaaatgtagggaccaaaaatatatttaa 3879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 19353068 - 19353162
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    ||||||||||||||||||||||| |||||||||||| | || ||||||| ||||| || ||||||||  ||| | |||||| |||||||| ||||    
T  19353068 gaaaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaaccctt 19353162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 21949830 - 21949888
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||| ||||||||    
T  21949830 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgc 21949888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 119101 - 119054
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  119101 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 119054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 31093087 - 31093028
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    |||||||||||||||||||||||| || ||||||||| |||| ||| |||||||||||||    
T  31093087 agaaaaatgtagggattttaaaaacatctattgaaatgtaaggactaattctcaaaatcg 31093028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 119272 - 119226
Alignment:
Q  198 aaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattct 119226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 3878863 - 3878805
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||| ||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  3878863 gaaaaatatagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 3878805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 19352563 - 19352513
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||||||| ||||||||||||  ||| ||||||||    
T  19352563 agaaaaatgtagggattttaaaaacatttattgaaatgcaaggactattct 19352513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 30351704 - 30351752
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    ||||||||||| ||||||||||||||||||||||| || | ||||||||    
T  30351704 aaaaatgtaggaattttaaaaatatttattgaaatgtagggactattct 30351752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 119957 - 120004
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||||| |||||||||||| |||||||||||| |||| ||||||    
T  119957 gaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatt 120004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 35373682 - 35373721
Alignment:
Q  203 tagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  35373682 tagggattttaaaaatatttattgaaatgaaagaactatt 35373721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 35383474 - 35383513
Alignment:
Q  203 tagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  35383474 taggaattttaaaaatatttattgaaataaaagaactatt 35383513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 119786 - 119832
Alignment:
Q  198 aaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||| ||||||||||||  ||| ||||||||    
T  119786 aaatgtagggattttaaaaacatttattgaaatgcaaggactattct 119832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 14626089 - 14626123
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaat 230  Q
    |||||||||||||||||||||| ||||||||||||    
T  14626089 aaaaatgtagggattttaaaaacatttattgaaat 14626123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 4187837 - 4187882
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||  ||||||||||||||||||||||||| |||| ||||||    
T  4187837 aaaatgtgaggattttaaaaatatttattgaaatgtaaggactatt 4187882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 4186844 - 4186796
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||| ||||||| |||||||||||| || | ||||||||    
T  4186844 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattct 4186796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 29784024 - 29783959
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatg 261  Q
    ||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  29784024 aaaaatgtaggaattttaaaaacatttattgaaatatagggactattctcaaaatcgcacaaaatg 29783959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 18443266 - 18443178
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||  ||||||| | | | |||||| ||||||||    
T  18443266 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 18443178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 18443608 - 18443696
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||| ||||||||||||||| |||||||||||| || | ||||||||||||||||| ||||||| ||| | |||||| ||||||||    
T  18443608 gaaaaatatagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaatgtaaggaccaaaaacatatttaa 18443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 29784378 - 29784435
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcg 252  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  29784378 gaaaaatgtagggattttaaaaatatttattgaaatgtaaagactattctcaaaatcg 29784435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 1244443 - 1244535
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| ||||    
T  1244443 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccctt 1244535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 41298676 - 41298768
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| ||||    
T  41298676 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccctt 41298768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 28898118 - 28898031
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  28898118 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 28898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 41298335 - 41298246
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||  ||||||| | | | |||||| ||||||||    
T  41298335 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 41298246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 884773 - 884677
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||  ||||| | | | | |||||| |||||||| ||||||    
T  884773 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacccttta 884677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 1244102 - 1244006
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||  ||||| | | | | |||||| |||||||| ||||||    
T  1244102 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacccttta 1244006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 28898459 - 28898517
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  28898459 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 28898517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 22954136 - 22954071
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||||||||||||||||||| ||||||| |||| || | |||||||||||||| ||| |||||    
T  22954136 gaaaaatgtagggattttaaaaacatttattaaaatgtagggactattctcaaaattgcataaaat 22954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 33847955 - 33847898
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    |||||||||||||||||||||| |||||||||||| ||   |||||||||||||||||    
T  33847955 aaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcgc 33847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 30939562 - 30939612
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||||||||||||| |||||| || | ||||||||    
T  30939562 agaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattct 30939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 33848296 - 33848354
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    |||||||||||| |||||||||| |||||||||||| || | |||||||| ||||||||    
T  33848296 gaaaaatgtaggaattttaaaaacatttattgaaatgtagggactattcttaaaatcgc 33848354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 23548841 - 23548922
Alignment:
Q  203 tagggattttaaaaatatttattgaaatataagaactattctc-aaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||| ||||||||| ||||||||||||||||||||||||| || ||| || | ||||||| | | | |||||||||||||||    
T  23548841 taggaattttaaaagtatttattgaaatataagaactattttctaaagtcacgcaaaatgtagggaccaaaaatatatttaa 23548922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 27310139 - 27310103
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaat 230  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  27310139 agaaaaatgtagggattttaaaaacatttaatgaaat 27310103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 31228309 - 31228410
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctttattct 294  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||  |||||| | | | |||||| |||||||| | ||| ||||    
T  31228309 gaaaaatgtagggattttaaaaacatttattgaaatgtaggaactattctcaaaatcgcgtaaaatgtagggatcaaaaacatatttaaccattttttct 31228408  T
Q  295 tt 296  Q
    ||    
T  31228409 tt 31228410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 28505299 - 28505211
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||  ||||||| | | | |||||| ||||||||    
T  28505299 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 28505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 2669097 - 2669003
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||| ||| |||||  ||| | |||||| |||||||| |||||    
T  2669097 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcataaaatataaggaccaaaaacatatttaacccttt 2669003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 43979989 - 43980082
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| |||||||| |||||    
T  43979989 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacccttt 43980082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 21235118 - 21235030
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||| |||||||||  ||||||| | | | |||||| ||||||||    
T  21235118 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattatcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 21235030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 28957741 - 28957829
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  28957741 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 28957829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 38026106 - 38026194
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||| ||  |||||| | ||| |||||| ||||||||    
T  38026106 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcgtaaaatgtaggaaccaaaaacatatttaa 38026194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 55347651 - 55347559
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcct 287  Q
    ||||||||||||||||||||||| ||||||| |||| || | |||||||||||||| ||  |||||| | | | |||||||||||||||||||    
T  55347651 gaaaaatgtagggattttaaaaacatttattaaaatgtagggactattctcaaaattgcgtaaaatgtagggaccaaaaatatatttaatcct 55347559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 2669438 - 2669525
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  2669438 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 2669525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 12922731 - 12922644
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||| || ||||||| | | | |||||| ||||||||    
T  12922731 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 12922644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 12923072 - 12923139
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatg 261  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||| ||||||||    
T  12923072 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaatg 12923139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 194 - 289
Target Start/End: Complemental strand, 28957402 - 28957307
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| |||||||| |||||    
T  28957402 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttt 28957307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 30546146 - 30546233
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||||| |||||||| ||   ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  30546146 aaaaatgtagggattttaaaaatattcattgaaatgtagagactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 30546233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 31227970 - 31227881
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| ||||||||    
T  31227970 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 31227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 12108289 - 12108345
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcg 252  Q
    |||||||||||||||||||||| |||||||||||| || | ||||||||||||||||    
T  12108289 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcg 12108345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 30545804 - 30545708
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||  ||||| | | | | |||||| |||||||| ||||||    
T  30545804 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacccttta 30545708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 54167584 - 54167536
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  54167584 aaaaatgtagggattttaaaaacatttattgaaatataaggactattct 54167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 12107937 - 12107838
Alignment:
Q  90 cgggtcaaatcaaattatttgccccaaacctggttttaatttttacaaagaatat-aaataaaataaatatattgccacgtcagcattctgtttgcttat 188  Q
    ||||||||||||||  |||||   |||||| |||| |||||||||||| |||||| |||||||||||| |||||| |||| ||||||| ||||| |||||    
T  12107937 cgggtcaaatcaaaccatttggttcaaacccggttataatttttacaaggaatataaaataaaataaaaatattgtcacggcagcattatgttttcttat 12107838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 38025766 - 38025711
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaat 250  Q
    |||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  38025766 gaaaaatgtagggattttaaaattttttattgaaatgtaaggactattctcaaaat 38025711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 40841551 - 40841464
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||| ||||||||  |||||| | | | |||||| ||||||||    
T  40841551 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 40841464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 1317151 - 1317093
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  1317151 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 1317093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 40841892 - 40841950
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||| ||||||||    
T  40841892 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgc 40841950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 43979648 - 43979590
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  43979648 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 43979590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 46263065 - 46263123
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  46263065 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 46263123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 55347970 - 55348026
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgc 253  Q
    ||||||||||||||||||||| |||||||||||| || | |||||||| ||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcgc 55348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 789984 - 789897
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| ||| |||||||| || | |||||| ||||||| || ||||||| | | | |||||| ||||||||    
T  789984 aaaaatgtagggattttaaaaacattcattgaaatgtatggactattttcaaaattgcgcaaaatgtagggaccaaaaacatatttaa 789897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 47053852 - 47053805
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  47053852 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 47053805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 790325 - 790383
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||| |||||||||||||    
T  790325 gaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 790383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 21235460 - 21235526
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatg 261  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||| |||||||||  |||||||    
T  21235460 gaaaaatgtagagattttaaaaacatttattgaaatgtagggactattatcaaaatcgtgcaaaatg 21235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 5545018 - 5545099
Alignment:
Q  203 tagggattttaaaaatatttattgaaatataagaacta-ttctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||| |||||||||| |||||||||||| ||||||||| || ||||| || | ||||||| | |||||||||| ||||||||    
T  5545018 taggcattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaa 5545099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 17287576 - 17287531
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||    
T  17287576 aaaatgtaggaattttaaaaatatttattgaaatgtaaggactatt 17287531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 49426353 - 49426398
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||    
T  49426353 aaaatgtaaggattttaaaaatatttattgaaatgtaaggactatt 49426398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 49424624 - 49424580
Alignment:
Q  144 taaataaaataaatatattgccacgtcagcattctgtttgcttat 188  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||    
T  49424624 taaataaaatataaatatagccacgtcagcattctgtttgcttat 49424580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 12107794 - 12107707
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaat 284  Q
    ||||||||||||||||| ||| ||||||| |||| || | | |||||||||||||||  |||||| | | | |||||| |||||||||    
T  12107794 aaaatgtagggattttagaaacatttattaaaatgtaggtattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaat 12107707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 47058507 - 47058541
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaat 230  Q
    |||||||||||||||||||||| ||||||||||||    
T  47058507 aaaaatgtagggattttaaaaacatttattgaaat 47058541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 54168823 - 54168857
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaat 230  Q
    |||||||||||||||||||||||||||||| ||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaat 54168857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 17288374 - 17288407
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaat 230  Q
    ||||||||||||||||||||| ||||||||||||    
T  17288374 aaaatgtagggattttaaaaacatttattgaaat 17288407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 29691913 - 29691958
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||    
T  29691913 aaaatgtgaggattttaaaaatatttaatgaaatataaaaactatt 29691958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 54142414 - 54142349
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaatg 261  Q
    |||||||| |||||||||||| |||||||||||| || | ||||||| ||||| |||| |||||||    
T  54142414 aaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatg 54142349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 5544862 - 5544826
Alignment:
Q  208 attttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  5544862 attttaaaaatatttaatgaaatataggaactattct 5544826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 26525552 - 26525495
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcg 252  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  26525552 gaaaaatgtagggattttaaaaatatttattgaaatgtaagaactactctcaaaatcg 26525495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 1804323 - 1804227
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    |||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||||    
T  1804323 agaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttta 1804227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 12090126 - 12090218
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||||| | | |||||| |||||||| ||||    
T  12090126 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgcagggaccaaaaacatatttaaccctt 12090218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 39096613 - 39096549
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    ||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  39096613 aaaaatgtatggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgcacaaaat 39096549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 11451186 - 11451281
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttta 290  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||||    
T  11451186 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttta 11451281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 1804662 - 1804755
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||    
T  1804662 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 1804755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 27377739 - 27377642
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctttatt 292  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||| ||||    
T  27377739 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctatatt 27377642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 34038251 - 34038308
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcg 252  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  34038251 gaaaaatgtaggaattttaaaaatatttattgaaatgtaaaaactattctcaaaatcg 34038308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 6476177 - 6476089
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  6476177 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6476089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 6476517 - 6476605
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| ||||||||    
T  6476517 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 6476605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 26525890 - 26525982
Alignment:
Q  192 ggagaaaaat-gtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | |||||| |||||||||| ||||||| | | | |||||| ||||||||    
T  26525890 ggagaaaaattgtagggattttaaaaacatttattgaaatatagggactattatcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 26525982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 39096956 - 39097044
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||  ||||||| | | | |||||| ||||||||    
T  39096956 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggattattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 39097044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 3854498 - 3854585
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  3854498 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 3854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 12089785 - 12089729
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaat 250  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  12089785 gaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaat 12089729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 34037898 - 34037834
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaat 260  Q
    |||||||||||||||||||||| ||| |||||||| || | ||||||||||||||||| ||||||    
T  34037898 aaaaatgtagggattttaaaaacattcattgaaatgtagggactattctcaaaatcgcgcaaaat 34037834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 289
Target Start/End: Complemental strand, 11450847 - 11450752
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatccttt 289  Q
    ||||||||||||||||||| |||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| |||||||| |||||    
T  11450847 agaaaaatgtagggatttttaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttt 11450752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 3854157 - 3854099
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  3854157 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 3854099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 10709566 - 10709500
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaat 260  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||| |||||||| | ||||||    
T  10709566 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaat 10709500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 22701603 - 22701545
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||    
T  22701603 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg 22701545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 44930073 - 44930027
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  44930073 aaaaatgtagggattttaaaaatatttattgaaatgtaaggactatt 44930027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 27378078 - 27378167
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||||||| |||| |||||||||||| || | | |||||||||||||||  |||||| | | | |||||| ||||||||    
T  27378078 agaaaaatgtagggatttttaaaacatttattgaaatgtagggattattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 27378167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 32861047 - 32861128
Alignment:
Q  203 tagggattttaaaaatatttattgaaatataagaacta-ttctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    ||||||||||||||| ||||||||||||||||| |||| || ||||| || ||||||||||| | | |||||| ||||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaa 32861128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 44934682 - 44934729
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  44934682 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 44934729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 10708114 - 10708067
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||||||| |||||||||| |||||||||||| |||| ||||||    
T  10708114 gaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactatt 10708067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 39947085 - 39947132
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||||| |||||||||||| |||||||||||| |||| ||||||    
T  39947085 gaaaaatgtacggattttaaaaacatttattgaaatgtaaggactatt 39947132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 23221924 - 23221876
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||| ||||||| |||||||||||| || | ||||||||    
T  23221924 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattct 23221876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 283
Target Start/End: Complemental strand, 12734262 - 12734175
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||||| |||||||| || | ||||||||||||||||| ||||||| | | | |||||| ||||||||    
T  12734262 aaaaatgtagggattttaaaaatattcattgaaatgtagggactattctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaa 12734175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 29917538 - 29917625
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||  ||||||| | | | |||||| ||||||||    
T  29917538 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaa 29917625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 29917194 - 29917102
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||| |||||||||||| || | ||||||||||||||||| ||||| | | | | |||||| |||||||| ||||    
T  29917194 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgcaaaacgtagggatcaaaaacatatttaaccctt 29917102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 12734603 - 12734661
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaact-attctcaaaatcg 252  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  12734603 gaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaatcg 12734661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 9800344 - 9800431
Alignment:
Q  197 aaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||| |||||||||||| ||||| ||||||||| | ||||||| |||||   || ||||||||||| | |||||||||||||||    
T  9800344 aaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaa 9800431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 24846053 - 24845998
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaat 250  Q
    ||||||| |||| |||||||||| |||||||||||| |||| ||||||||||||||    
T  24846053 gaaaaatataggaattttaaaaacatttattgaaatgtaaggactattctcaaaat 24845998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 26720411 - 26720318
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattc-tcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||||||||| |||||| || | ||||||| |||||   || ||||||| | | |  |||||||||||||||||||    
T  26720411 aaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaatcctt 26720318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 44024481 - 44024400
Alignment:
Q  203 tagggattttaaaaatatttattgaaatataagaacta-ttctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaa 283  Q
    |||||||||||||||||||||||||||| |||| |||| || ||||| || | ||||||| ||| | |||||| ||||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 44024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 4624623 - 4624575
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactattct 244  Q
    |||||||||||||||||||||| |||||||||||| |||  ||||||||    
T  4624623 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattct 4624575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 4624451 - 4624416
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaat 230  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4624451 gaaaaatgtagggattttaaaaacatttattgaaat 4624416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 39512 - 39418
Alignment:
Q  194 agaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||| |||||| | | | |||||| |||||||| ||||    
T  39512 agaaaaatgtagggattttaaaaacatttattgaaatgtagggattattctcaaaatcgcataaaatgtagggaccaaaaacatatttaaccctt 39418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 39851 - 39944
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactattctcaaaatcgcacaaaatgcaagaagcaaaaatatatttaatcctt 288  Q
    |||||||||| |||||||||||| |||||||||||| || | |||||||||||||||||  |||||| | | | |||||| |||||||| ||||    
T  39851 gaaaaatgtaaggattttaaaaacatttattgaaatgtagggactattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 39944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 29365 - 29318
Alignment:
Q  195 gaaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  29365 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 29318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 32994 - 33040
Alignment:
Q  196 aaaaatgtagggattttaaaaatatttattgaaatataagaactatt 242  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||    
T  32994 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 33040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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