View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1499_low_25 (Length: 360)
Name: NF1499_low_25
Description: NF1499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1499_low_25 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 10 - 346
Target Start/End: Complemental strand, 43745385 - 43745051
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43745385 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
43745286 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatga |
209 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43745285 |
tctcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattgcctgtcaagaatgcagttgttactgtgccggcttatttcaatga |
43745186 |
T |
|
| Q |
210 |
ttatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctg |
309 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43745185 |
ttatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctg |
43745088 |
T |
|
| Q |
310 |
gaaaagagaactaactctgtgcgaggacgaaatattt |
346 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43745087 |
gaaaagagaactaactctgtgcgaggaagaaatattt |
43745051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 305
Target Start/End: Complemental strand, 12528949 - 12528747
Alignment:
| Q |
103 |
gaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatt |
202 |
Q |
| |
|
||||||||||| |||||||||||| || ||||||| ||||||||||| ||||| | | | ||||| ||||||||||| |||| ||||| || |||| |
|
|
| T |
12528949 |
gaagaaatatcctctatgattctatcacagatgcgagagattgcagatgcatttcttgagtcacctgttaagaatgcagtgattacggtgccagcgtatt |
12528850 |
T |
|
| Q |
203 |
tcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcata |
302 |
Q |
| |
|
||||||||| ||||| |||||| |||||||||| ||||||||| || |||| || ||||||||| ||||| ||||| || ||| ||||||| |
|
|
| T |
12528849 |
tcaatgattcgcagcgacgagccaccaaggatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaactgcagctgctcttgcata |
12528750 |
T |
|
| Q |
303 |
tgg |
305 |
Q |
| |
|
||| |
|
|
| T |
12528749 |
tgg |
12528747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 346
Target Start/End: Complemental strand, 28220486 - 28220153
Alignment:
| Q |
13 |
aagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatat |
112 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
28220486 |
aagttgtggccattcaaggtcatttccggaacgaacgacaaacccatgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatct |
28220387 |
T |
|
| Q |
113 |
catctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgatta |
212 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
28220386 |
catctatggttctaacaaagatgcgtgagattgcagaggcctttttggaatttcctgtcaagaatgcagttattactgtgcctgcttatttcaatgatta |
28220287 |
T |
|
| Q |
213 |
tcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaa |
312 |
Q |
| |
|
||||||||||||||| ||||||| ||| |||||||||| || ||||| | | |||| ||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
28220286 |
tcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgttctaaggatagtcaatgaacccactgctgctgctattgcatatggattggac |
28220187 |
T |
|
| Q |
313 |
aagagaactaactctgtgcgaggacgaaatattt |
346 |
Q |
| |
|
|| |||||||||| || ||| ||||||||||| |
|
|
| T |
28220186 |
aaaagaactaactgcatgggagaacgaaatattt |
28220153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 42555574 - 42555759
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| | |||| ||| ||| |||||| ||| | |||| ||||||||||||| |||||||| |||||||||| |
|
|
| T |
42555574 |
atgaagttgtggccattcaaggtcatttccggaataaatggcaagcccatgatttatgtaacgtacgagggacaggagaaacacctatgcgccgaagaaa |
42555673 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccg |
195 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||| |||||||| || | |||||||||||||||||||||||||||||| |
|
|
| T |
42555674 |
tctcatctatgattctaacaaagatgcgcaagattgcagaggcatttttggaaatgcctgtcaagaatgcagttgttactgtgccg |
42555759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 42555759 - 42555830
Alignment:
| Q |
219 |
gaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgc |
290 |
Q |
| |
|
||||||||| ||||||| ||| | |||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
42555759 |
gaaagccacaatagatgcaggtactattgctggtctgaatgttatgaagataatcaatgaacccactgctgc |
42555830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 10 - 323
Target Start/End: Complemental strand, 3147810 - 3147497
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||| ||||||||| ||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3147810 |
atgatgttgtggccattcaaggtcatttgcggagtgaatgacaaacccatgatttcggttaagtgcaagggacaggagaagcacctatgtgctgaagaaa |
3147711 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatga |
209 |
Q |
| |
|
| ||||||||| |||||||||||||||| ||| ||||||| ||||| |||| ||||||||||||||||||||||| || || |||||||||||||| |
|
|
| T |
3147710 |
tctcatctatggttctaacaaagatgcgcaagactgcagaggagtttttagaattgcctgtcaagaatgcagttgttaccgtacctgcttatttcaatga |
3147611 |
T |
|
| Q |
210 |
ttatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctg |
309 |
Q |
| |
|
| |||||||||||| || |||||||||||| |||||||| ||| || ||||| ||||||||||||||| ||||||||||||||||| ||||| ||| |
|
|
| T |
3147610 |
tgctcagcggaaagcgacaatagatgctggtgttattgctggccttaatattatgcggataatcaatgaacctactgctgcagctattgcgtatggactg |
3147511 |
T |
|
| Q |
310 |
gaaaagagaactaa |
323 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
3147510 |
gacaagagaactaa |
3147497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 15 - 305
Target Start/End: Original strand, 8585341 - 8585631
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| |||||||| || || || | ||||||||||| ||||| |||||||||||||||| || || ||| |||||||||| || ||||||||| |
|
|
| T |
8585341 |
gttgtggccattcaaggttatctctggtgttaatgacaaacctatgattactgttaagtacaagggtcaagaaaagaacctatgtgctgaggaaatatca |
8585440 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
||||| || || ||||| ||| ||||||||||||||| |||| ||| ||||| | ||||||||||| |||||||| |||||||||||||||| || |
|
|
| T |
8585441 |
tctatcatcctcacaaacatgaagaagattgcagagacatatttgaaatcacctgttcaaaatgcagttgtgactgtgcctgcttatttcaatgattctc |
8585540 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8585541 |
agcgaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatgg |
8585631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 305
Target Start/End: Complemental strand, 8629061 - 8628775
Alignment:
| Q |
19 |
tggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatcta |
118 |
Q |
| |
|
||||| |||||||| ||||| || | |||||||| || ||||| |||||||||||||||| || |||||| |||||||||| || ||||||||||||| |
|
|
| T |
8629061 |
tggccattcaaggttatttctggtcttaatgacaagcctatgattgctgttaagtacaagggtcaagagaagaacctatgtgctgaggaaatatcatcta |
8628962 |
T |
|
| Q |
119 |
tgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcg |
218 |
Q |
| |
|
| || || |||| ||| ||||||||||| | | |||| ||| ||||| || ||||||||||| || ||||| |||||||||||||||| |||||| |
|
|
| T |
8628961 |
ttatccttgcaaatatgaagaagattgcagaggcttatttgaaatcacctgtaaaaaatgcagttgtcaccgtgcctgcttatttcaatgattctcagcg |
8628862 |
T |
|
| Q |
219 |
gaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8628861 |
aaaagccaccatgaatgctggtgccattgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatgg |
8628775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 66 - 319
Target Start/End: Original strand, 7877419 - 7877672
Alignment:
| Q |
66 |
tgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattt |
165 |
Q |
| |
|
||||||||| ||||| |||| |||||| | |||||||| ||||||||||| ||||| || ||||||||||| ||||||||||||| |||||| | | |
|
|
| T |
7877419 |
tgttaagtataagggcgaggaaaagcacttttgtgccgaggaaatatcatccatgatccttacaaagatgcgcgagattgcagagaagtttttggagtca |
7877518 |
T |
|
| Q |
166 |
cctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatga |
265 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| |||||||||||| |||| || || |||||||| |
|
|
| T |
7877519 |
cctgtcaagaatgcagttgttactgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgttatgc |
7877618 |
T |
|
| Q |
266 |
agataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaa |
319 |
Q |
| |
|
|||||| |||||||| |||||||| || |||||||||| || ||||||||| |
|
|
| T |
7877619 |
ggataattaatgaaccaactgctgctgcccttgcatatggccttcaaaagagaa |
7877672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 319
Target Start/End: Complemental strand, 8667952 - 8667648
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| |||||||| ||||| || | ||||||||||| ||||| |||||||||||||||| || ||||||||| | ||||| || |||||||| |
|
|
| T |
8667952 |
gttgtggccattcaaggttatttctggtgttaatgacaaacctatgattactgttaagtacaagggtcaagagaagcacttttgtgctgaggaaatatct |
8667853 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
|||||| | || ||||||||||| ||| |||| ||| ||| | || | || ||||||||||| |||||||||||||| ||||| |||||||||| || |
|
|
| T |
8667852 |
tctatggtgcttacaaagatgcgagaggttgcggaggcatatctggggtcgccggtcaagaatgccgttgttactgtgccagcttacttcaatgattctc |
8667753 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaa |
314 |
Q |
| |
|
|||| || ||||| ||||||||||| | |||||||| ||| |||| || ||||||||||||||| ||||| ||||||||||||||||| || || || |
|
|
| T |
8667752 |
agcgaaaggccaccatagatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgcggcagctattgcatatggccttgacaa |
8667653 |
T |
|
| Q |
315 |
gagaa |
319 |
Q |
| |
|
||||| |
|
|
| T |
8667652 |
gagaa |
8667648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 319
Target Start/End: Original strand, 10494009 - 10494313
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| |||||||| | ||| || | ||||||||||| ||||| | | |||||||||||| || ||||||||| | |||||||| ||||||||| |
|
|
| T |
10494009 |
gttgtggccattcaaggttacttcaggtgtcaatgacaaacctatgattaccgctaagtacaagggtcaagagaagcacttttgtgccgaggaaatatca |
10494108 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
|||||| | || | ||||||||| ||| |||||||| ||| |||| | || ||||||||||| |||||||||||||||||||| ||||| |||| || |
|
|
| T |
10494109 |
tctatggtccttataaagatgcgagaggttgcagaggcatatttggggtcaccagtcaagaatgctgttgttactgtgccggcttacttcaacgattctc |
10494208 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaa |
314 |
Q |
| |
|
| || || || ||| | ||||||||||| |||||||| ||| |||| || ||||||||||||||| ||||||||||||||||||||||| || || || |
|
|
| T |
10494209 |
aacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaa |
10494308 |
T |
|
| Q |
315 |
gagaa |
319 |
Q |
| |
|
||||| |
|
|
| T |
10494309 |
gagaa |
10494313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 69 - 318
Target Start/End: Original strand, 13333145 - 13333394
Alignment:
| Q |
69 |
taagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcct |
168 |
Q |
| |
|
||||| |||||| || ||||||||| | |||||||| ||||||||||||||| | || ||||||||||| ||| |||||||| ||| | || | || |
|
|
| T |
13333145 |
taagtgcaagggtcaagagaagcacttttgtgccgaggaaatatcatctatggtccttacaaagatgcgagaggttgcagaggcatatatggggtcacca |
13333244 |
T |
|
| Q |
169 |
gtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaaga |
268 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||| |||||| || ||||| ||||||||||||| |||||||| ||| || | || | |
|
|
| T |
13333245 |
gtcaagaatgccgttgttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaatatcattcgaa |
13333344 |
T |
|
| Q |
269 |
taatcaatgaacccactgctgcagctattgcatatggtctggaaaagaga |
318 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| || || |||||| |
|
|
| T |
13333345 |
taatcaatgaacctactgctgcagctattgcatatggccttgacaagaga |
13333394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 323
Target Start/End: Complemental strand, 6790050 - 6789737
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||| ||| ||||| |||||||||||| | || | |||||||| ||| ||||| |||| |||| ||||| |||||||||| ||||||| || ||| |
|
|
| T |
6790050 |
atgatgttttggccattcaaggtcattgctggcgtcaatgacaagcccatgattgttgttgagtataagggtgaggagaagcaactatgtgttgaggaag |
6789951 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatga |
209 |
Q |
| |
|
| || |||||||| || || |||||||| |||||||| |||| || |||||| | | || ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
6789950 |
tttcgtctatgatcctcaccaagatgcgggagattgctgagaaatatttgcagtcagagataaaaaatgcagttattactgtgcctgcttatttcaatga |
6789851 |
T |
|
| Q |
210 |
ttatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctg |
309 |
Q |
| |
|
|| ||| |||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||| || ||||| ||| |||||||||| || |
|
|
| T |
6789850 |
ttctcaacggaaagccactttagatgctggtgccattgctggtcttaatgttatacgaataatcaatgaaccaacagctgctgctcttgcatatggcctt |
6789751 |
T |
|
| Q |
310 |
gaaaagagaactaa |
323 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
6789750 |
gataagagaactaa |
6789737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 66 - 323
Target Start/End: Complemental strand, 8602456 - 8602199
Alignment:
| Q |
66 |
tgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattt |
165 |
Q |
| |
|
||||||||| ||||| ||| |||||| | ||||| || ||||| ||||| ||| | || |||||||||||||| |||||||||| ||| || | | |
|
|
| T |
8602456 |
tgttaagtataagggtggggaaaagcacttctgtgctgaggaaatctcatcaatggtccttacaaagatgcgtgaaattgcagagaagtttctggagtca |
8602357 |
T |
|
| Q |
166 |
cctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatga |
265 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||| || |||| ||| |
|
|
| T |
8602356 |
cctgtcaagaatgcagttgttactgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgtaatgc |
8602257 |
T |
|
| Q |
266 |
agataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaactaa |
323 |
Q |
| |
|
|||||||||||| || ||||| || ||| |||||||||| || |||||||| |||| |
|
|
| T |
8602256 |
ggataatcaatgagccaactgcagctgctcttgcatatggccttcaaaagagagctaa |
8602199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 306
Target Start/End: Complemental strand, 8659901 - 8659605
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||| ||||||||| |||||||| || | || |||| ||||||| | ||||| |||| |||||||||| |||||||||||| | ||||| || |||| |
|
|
| T |
8659901 |
atgatgttgtggccattcaaggttatcgctggtgtgaacgacaaactcatgattaatgttcagtacaagggtcaggagaagcacttttgtgcggaggaaa |
8659802 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatga |
209 |
Q |
| |
|
||||||||||| | || ||||| ||||| || |||||||||||| | | | ||||| |||||||| |||||||| ||||| || || |||||||| |
|
|
| T |
8659801 |
tatcatctatggtacttacaaaaatgcgagaagttgcagagacatatctaatgtcacctgtgaagaatgctgttgttacagtgcctgcatagttcaatga |
8659702 |
T |
|
| Q |
210 |
ttatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggt |
306 |
Q |
| |
|
|| |||||| |||||||| ||||| | |||||||||||||| ||| |||| || ||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
8659701 |
ttctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagataattaatgaacctactgctgcagctattgcatatggt |
8659605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 320
Target Start/End: Complemental strand, 8647410 - 8647105
Alignment:
| Q |
12 |
gaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaata |
111 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||||||||| ||||| |||||| |||||||| | ||||||| ||||| || |||||| |
|
|
| T |
8647410 |
gaagttgtggccattcaaggtcatt---ggggtgaatgacaaacccatgattattgttaaatacaagggtgaagagaagcgttattgtgctgaggaaata |
8647314 |
T |
|
| Q |
112 |
tcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgatt |
211 |
Q |
| |
|
||||| ||||| || ||||||||||| ||| ||||||||| || ||| | ||||| ||||||||||||||||||||||| || || |||||||||| |
|
|
| T |
8647313 |
tcatcgatgatcctcacaaagatgcgagaggttgcagagaaatatttaatgtcccctgtaaagaatgcagttgttactgtgcctgcatacttcaatgatt |
8647214 |
T |
|
| Q |
212 |
atcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctgga |
311 |
Q |
| |
|
||||||| ||||||||| ||||||| || ||||||||||| ||| || | || ||||||||||||||| || ||||| ||| | |||||||| || || |
|
|
| T |
8647213 |
atcagcgaaaagccactatagatgccggggccattgctggccttaatatcatccggataatcaatgaaccaacagctgctgctctcgcatatggccttga |
8647114 |
T |
|
| Q |
312 |
aaagagaac |
320 |
Q |
| |
|
|||||||| |
|
|
| T |
8647113 |
caagagaac |
8647105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 319
Target Start/End: Complemental strand, 1302002 - 1301689
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||| ||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||| | || | || |||| |
|
|
| T |
1302002 |
atgatgttgtggccattcaaggtcatcgccggtgtgaatgacaaacccgtgattgttgttaagtacaagggtcaggagaagcacttttgcgtggaggaaa |
1301903 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatga |
209 |
Q |
| |
|
||||||||||| | || || |||||||| || ||||||||||||| | | | || || | ||||| |||||||||||||| || |||||||||| |
|
|
| T |
1301902 |
tatcatctatggtccttacgaagatgcgagaaattgcagagacatatctaatgtcaccagtgacaaatgctgttgttactgtgcctgcacatttcaatga |
1301803 |
T |
|
| Q |
210 |
ttatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaac----ccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|| |||||| |||||||| ||||||| ||||| |||||||| ||| |||| || ||||||| ||||||| | ||||||||||||||||| ||||| |
|
|
| T |
1301802 |
ttctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtcattcagataattaatgaacctagctactgctgcagctattgcgtatgg |
1301703 |
T |
|
| Q |
306 |
tctggaaaagagaa |
319 |
Q |
| |
|
| | || ||||||| |
|
|
| T |
1301702 |
ttttgacaagagaa |
1301689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 17268469 - 17268162
Alignment:
| Q |
18 |
gtggccgttcaaggtcatttccggat-tgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatc |
116 |
Q |
| |
|
|||||| |||||||||||| | |||| ||||||||||||| ||||||| | ||||||||||||| |||||| ||| | ||||| || ||||| || || |
|
|
| T |
17268469 |
gtggccattcaaggtcattgc-ggatatgaatgacaaaccaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatttcgtc |
17268371 |
T |
|
| Q |
117 |
tatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcag |
216 |
Q |
| |
|
|||| | || ||||||||||| |||||||| ||| || | | ||| | || | |||||| || ||||||| |||||||| ||||| |||| |||| |
|
|
| T |
17268370 |
tatggtactcacaaagatgcgggagattgctgaggaatatctagaatcatcggttatgaatgctgtcattactgtcccggcttacttcaacgattctcag |
17268271 |
T |
|
| Q |
217 |
cggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaaga |
316 |
Q |
| |
|
|| |||||||| |||||||||||| ||||||||| ||| |||| ||||| ||||||||||||| ||||||||||||||||||||||| || | |||| |
|
|
| T |
17268270 |
cgaaaagccaccatagatgctggtgtcattgctggccttaatgtattgaaggtaatcaatgaaccaactgctgcagctattgcatatggccttggcaaga |
17268171 |
T |
|
| Q |
317 |
gaactaact |
325 |
Q |
| |
|
||||||||| |
|
|
| T |
17268170 |
gaactaact |
17268162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 66 - 305
Target Start/End: Original strand, 27830561 - 27830800
Alignment:
| Q |
66 |
tgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattt |
165 |
Q |
| |
|
||||||||||||| | |||||||| ||| ||||||| || ||||| ||||| ||| | || ||||||||||| ||||| || ||| ||| |||||||| |
|
|
| T |
27830561 |
tgttaagtacaagagtcaggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagatcgcggaggcatatttgcaatca |
27830660 |
T |
|
| Q |
166 |
cctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatga |
265 |
Q |
| |
|
|| || ||||||||||| | || ||||| |||||||||||||| | ||| || ||||||||||||||| | |||||||||||||| ||| |||||||| |
|
|
| T |
27830661 |
ccggttaagaatgcagtaataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgttatgc |
27830760 |
T |
|
| Q |
266 |
agataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||| | || || ||||||||||||||||||||||| |
|
|
| T |
27830761 |
ggataataagcgagcctactgctgcagctattgcatatgg |
27830800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 305
Target Start/End: Complemental strand, 8654952 - 8654693
Alignment:
| Q |
46 |
aatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattg |
145 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| || || |||||||| | ||||| || |||||||||||| | |||| ||||||||||| ||||||| |
|
|
| T |
8654952 |
aatgacaaacccatgattactgttaagtacaaaggtcaagagaagcaattttgtgctgaggaaatatcatctgcggttcttacaaagatgcgagagattg |
8654853 |
T |
|
| Q |
146 |
cagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccat |
245 |
Q |
| |
|
||||| ||| | || || ||||| |||| ||||||||||||||||| || |||||||| | |||||| ||||| || |||||||||||||||| |
|
|
| T |
8654852 |
cagaggcataccttggatcacccgtcaaaaatgtcgttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccat |
8654753 |
T |
|
| Q |
246 |
tgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||| ||| | || || |||| |||||||||| ||||| ||||||||||||||||| |
|
|
| T |
8654752 |
tgctggacttaacgtcattcggatactcaatgaacctactgccgcagctattgcatatgg |
8654693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 106 - 318
Target Start/End: Original strand, 8636069 - 8636281
Alignment:
| Q |
106 |
gaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttca |
205 |
Q |
| |
|
|||||||| |||||| | || ||||||||||| |||||||| ||| ||| | || ||| |||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
8636069 |
gaaatatcgtctatggtcctgacaaagatgcgagagattgctgaggcatatctggaatcatctgtcaagaatgcagtcattactgtgcccgcttatttca |
8636168 |
T |
|
| Q |
206 |
atgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||| |||||| ||| |||| |||||||||||||||||| || ||| |||| || ||||||||||||||| |||||||||||| |||| ||||| |
|
|
| T |
8636169 |
atgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgctgcagcttttgcgtatgg |
8636268 |
T |
|
| Q |
306 |
tctggaaaagaga |
318 |
Q |
| |
|
|| |||||||| |
|
|
| T |
8636269 |
acttcaaaagaga |
8636281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 319
Target Start/End: Original strand, 8671265 - 8671569
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| |||||||| ||||| || | ||||||||||| ||||| |||| |||||| | || | |||||||| | ||||| || |||||||| |
|
|
| T |
8671265 |
gttgtggccattcaaggttatttctggtgttaatgacaaacctatgattactgtcaagtacgaaggtctagagaagcaattttgtgctgaggaaatatct |
8671364 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
|||||| | || ||||||||||| ||| |||| ||| ||| | || | | || ||||||||||| |||||||| ||||| ||||| |||||||||| || |
|
|
| T |
8671365 |
tctatggtgcttacaaagatgcgagaggttgcggaggcatatctggagtcaccggtcaagaatgccgttgttaccgtgccagcttacttcaatgattctc |
8671464 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaa |
314 |
Q |
| |
|
|||| | ||||| | ||||||||| | |||||||| ||| |||| || ||||||||||||||| ||||||||||||||||||||||| || || || |
|
|
| T |
8671465 |
agcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaa |
8671564 |
T |
|
| Q |
315 |
gagaa |
319 |
Q |
| |
|
||||| |
|
|
| T |
8671565 |
gagaa |
8671569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 305
Target Start/End: Original strand, 8382562 - 8382801
Alignment:
| Q |
66 |
tgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattt |
165 |
Q |
| |
|
||||||||| ||||| |||| || ||||| |||||||| ||||| || |||||| | || | ||||||||||||||||||||||| |||||| | | |
|
|
| T |
8382562 |
tgttaagtataagggtgaggaaaaacacctttgtgccgaggaaatctcctctatggtcctcaaaaagatgcgtgagattgcagagaattttttggagtca |
8382661 |
T |
|
| Q |
166 |
cctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatga |
265 |
Q |
| |
|
||| || |||||| ||||||||| ||||| || ||||||||||||| ||| ||||||||||| |||||||||||| |||||||| || |||| ||| |
|
|
| T |
8382662 |
cctatcgagaatgtagttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgtaatgc |
8382761 |
T |
|
| Q |
266 |
agataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||||||||| || ||||| || ||| |||||||||| |
|
|
| T |
8382762 |
ggataatcaatgagccaactgccgctgctcttgcatatgg |
8382801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 103 - 323
Target Start/End: Complemental strand, 8570756 - 8570536
Alignment:
| Q |
103 |
gaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatt |
202 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||| | | |||||| ||||||||||| ||||||| || ||||||| |
|
|
| T |
8570756 |
gaagaaatatcatctgtgattctctcaaagatgcgagagattgcagaagcatttttggagtctcctgttaagaatgcagtgattactgtacctgcttatt |
8570657 |
T |
|
| Q |
203 |
tcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcata |
302 |
Q |
| |
|
| ||||||| || || | ||||||| |||||| |||| |||||||| || |||| ||| ||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
8570656 |
ttaatgattcacaacgaagagccactaaagatgcaggtgaaattgctggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcata |
8570557 |
T |
|
| Q |
303 |
tggtctggaaaagagaactaa |
323 |
Q |
| |
|
||| || |||||||| |||| |
|
|
| T |
8570556 |
tggccttcaaaagagagctaa |
8570536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 106 - 306
Target Start/End: Original strand, 29581567 - 29581767
Alignment:
| Q |
106 |
gaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttca |
205 |
Q |
| |
|
||||||||||||||||| || ||||||||| ||| |||||||||| ||||||| |||| ||||| ||||||||||| |||| ||||| |||||||||| |
|
|
| T |
29581567 |
gaaatatcatctatgatcctctcaaagatgcatgatattgcagagaaatttttggaattgcctgtaaagaatgcagtgattaccgtgcctgcttatttca |
29581666 |
T |
|
| Q |
206 |
atgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||| |||||| |||||||| ||||||||| || ||||| || |||| |||| ||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
29581667 |
atgattctcagcgaaaagccaccaaagatgctggcattatagctggcctcaatgtaatgaggataatcaacgaaccaactgctgctgcacttgcatatgg |
29581766 |
T |
|
| Q |
306 |
t |
306 |
Q |
| |
|
| |
|
|
| T |
29581767 |
t |
29581767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 287
Target Start/End: Complemental strand, 8591120 - 8590899
Alignment:
| Q |
66 |
tgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaattt |
165 |
Q |
| |
|
||||||||||||||| |||| |||| || ||||| || ||||| ||||| ||| |||| ||||||||||| |||||||| || | |||||| | | |
|
|
| T |
8591120 |
tgttaagtacaagggtgaggaaaagcgtctttgtgcggaggaaatctcatccatggttctcacaaagatgcgagagattgctgaaaagtttttggagtca |
8591021 |
T |
|
| Q |
166 |
cctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttg-atgttatg |
264 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||| || ||||||||||| ||||||| |||||| |||| ||| |
|
|
| T |
8591020 |
cctgtcaagaatgcagttgttactgtgccagcttattttaatgattctcagaggaaagctaccaaagatgctggtgtcattgct-ggcttgaatgtaatg |
8590922 |
T |
|
| Q |
265 |
aagataatcaatgaacccactgc |
287 |
Q |
| |
|
|||||| |||||||| ||||| |
|
|
| T |
8590921 |
cggataattaatgaaccaactgc |
8590899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 103 - 323
Target Start/End: Complemental strand, 8576771 - 8576551
Alignment:
| Q |
103 |
gaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatt |
202 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||| |||||||||||| | ||| |||| ||||| ||||||||||| || ||||||| ||||||| |
|
|
| T |
8576771 |
gaagaaatatcatctgtgattctctcaaagatgcgagagattgcagaggcttttctgcagacacctgttaagaatgcagtgatttctgtgcctgcttatt |
8576672 |
T |
|
| Q |
203 |
tcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcata |
302 |
Q |
| |
|
| ||||||| || || | ||||||| |||||| ||||| |||||||| || |||| ||| |||||||||||||||| ||||| |||||| |||| || |
|
|
| T |
8576671 |
ttaatgattcccaacgaagagccactaaagatgcaggtgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgcggcagctcttgcgta |
8576572 |
T |
|
| Q |
303 |
tggtctggaaaagagaactaa |
323 |
Q |
| |
|
||| || |||||||| |||| |
|
|
| T |
8576571 |
tggccttcaaaagagagctaa |
8576551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 323
Target Start/End: Complemental strand, 17260604 - 17260466
Alignment:
| Q |
185 |
ttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccac |
284 |
Q |
| |
|
||||||| || |||||||||||||||| |||||| |||||||| |||||||||||| |||||||| ||| ||||| ||||| |||| |||||||| | |
|
|
| T |
17260604 |
ttactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgttttgaagttaattaatgaacctat |
17260505 |
T |
|
| Q |
285 |
tgctgcagctattgcatatggtctggaaaagagaactaa |
323 |
Q |
| |
|
||||||||||||||||||||| || | ||||||||||| |
|
|
| T |
17260504 |
tgctgcagctattgcatatggccttgtcaagagaactaa |
17260466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 8640179 - 8640418
Alignment:
| Q |
10 |
atgaagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaa |
109 |
Q |
| |
|
|||||||||||||| |||||||||||| || |||||||||||||| |||| |||||| |||||||| | ||||||| | |||||||| |||| |
|
|
| T |
8640179 |
atgaagttgtggccattcaaggtcatt---ggggtgaatgacaaacccacgattattgttaaatacaagggtgaagagaagcgtttttgtgccgaggaaa |
8640275 |
T |
|
| Q |
110 |
tatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcct---gtcaagaatgcagttgttactgtgccggcttatttcaa |
206 |
Q |
| |
|
||||||||||||| || | |||||||| ||| ||||||||| || ||| ||| ||| || |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
8640276 |
tatcatctatgatcctttcgaagatgcgagaggttgcagagaaatattt--aatgtccccccgtaaagaatgcagttgttactatgcctgcttacttcaa |
8640373 |
T |
|
| Q |
207 |
tgattatcagcggaaagccactgtagatgctggtgccattgctgg |
251 |
Q |
| |
|
||||||||||| |||||||| ||||||| || ||||||||||| |
|
|
| T |
8640374 |
tgattatcagcaaaaagccaccatagatgccggggccattgctgg |
8640418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 323
Target Start/End: Complemental strand, 8582145 - 8581925
Alignment:
| Q |
103 |
gaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatt |
202 |
Q |
| |
|
||||||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||| | | ||||| ||||||||||| ||||||| || ||||||| |
|
|
| T |
8582145 |
gaagaaatatcatctgttattctgacacagatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttatt |
8582046 |
T |
|
| Q |
203 |
tcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcata |
302 |
Q |
| |
|
| ||||||| || || | ||||||| |||||| |||| ||||| || || |||| ||| ||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
8582045 |
ttaatgattcacaacgaagagccactaaagatgcaggtgaaattgcaggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcata |
8581946 |
T |
|
| Q |
303 |
tggtctggaaaagagaactaa |
323 |
Q |
| |
|
||| || |||||||| |||| |
|
|
| T |
8581945 |
tggccttcaaaagagagctaa |
8581925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 106 - 305
Target Start/End: Original strand, 29577395 - 29577594
Alignment:
| Q |
106 |
gaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttca |
205 |
Q |
| |
|
|||||||| |||||||| || ||||||||| ||||||||||||| ||||||| | || || || ||||||||||| | || ||||| |||||||||| |
|
|
| T |
29577395 |
gaaatatcgtctatgatcctctcaaagatgcaggagattgcagagaaatttttggagttacccgtaaagaatgcagtgatcacagtgccagcttatttca |
29577494 |
T |
|
| Q |
206 |
atgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||||| |||||| |||||||| |||||| || |||||||| || |||| ||| ||||||||||||||| |||||||| || |||||||||| |
|
|
| T |
29577495 |
atgattctcagcgaaaagccaccaaagatgccggcattattgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatgg |
29577594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 323
Target Start/End: Complemental strand, 8559782 - 8559558
Alignment:
| Q |
99 |
tgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggct |
198 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| ||||||| ||||||||||| |||||||| | | | || ||||||| || |||| || || ||| |
|
|
| T |
8559782 |
tgccgaagaaatatcagctatgattctcacacagatgcgagagattgcagaagcatttttggagtcgacggttgagaatgctgtgattaccgtacctgct |
8559683 |
T |
|
| Q |
199 |
tatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattg |
298 |
Q |
| |
|
||||| ||||||| ||| | | |||||| |||||| |||| |||||||| ||| |||| ||| |||||||||||||||| ||||| || ||| ||| |
|
|
| T |
8559682 |
tattttaatgattctcaaagaagagccaccaaagatgcaggtgaaattgctggtcttaatgtaatgcagataatcaatgaaccaactgcagctgctcttg |
8559583 |
T |
|
| Q |
299 |
catatggtctggaaaagagaactaa |
323 |
Q |
| |
|
||||||| || |||||||| |||| |
|
|
| T |
8559582 |
catatggacttcaaaagagatctaa |
8559558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 308
Target Start/End: Complemental strand, 8610278 - 8610157
Alignment:
| Q |
187 |
actgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactg |
286 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||||||||||||| ||||||||||| |||| |||| ||| |||| || ||| ||||||||||| || | |
|
|
| T |
8610278 |
actgtgcctgcttattttaatgattctcagcggaaagccacaaaagatgctggtgtcatttctggccttaatgtaatccggattatcaatgaaccaacgg |
8610179 |
T |
|
| Q |
287 |
ctgcagctattgcatatggtct |
308 |
Q |
| |
|
|||| ||| ||||||||||||| |
|
|
| T |
8610178 |
ctgcggctcttgcatatggtct |
8610157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 323
Target Start/End: Complemental strand, 8538481 - 8538261
Alignment:
| Q |
103 |
gaagaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatt |
202 |
Q |
| |
|
|||||||||||| ||||| | || ||||||||||| ||| | || || ||||||| | | |||||||| |||||||| |||| || || ||||||| |
|
|
| T |
8538481 |
gaagaaatatcagctatggtcctcacaaagatgcgggagttcgctgaagtatttttggagtcacctgtcaaaaatgcagtgattacagtacctgcttatt |
8538382 |
T |
|
| Q |
203 |
tcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcata |
302 |
Q |
| |
|
||||||||| ||||| | |||||| ||||||||||| ||||||||| || |||| ||| ||||||||||||||| || ||||| ||| ||||||| |
|
|
| T |
8538381 |
tcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctacagctgctgctcttgcata |
8538282 |
T |
|
| Q |
303 |
tggtctggaaaagagaactaa |
323 |
Q |
| |
|
|| || |||||||| |||| |
|
|
| T |
8538281 |
cggccttcaaaagagagctaa |
8538261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 8546165 - 8545969
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| || |||||||||||||| | ||||||||||| ||| ||| || |||||||| |||| |||||| | ||| |||||||||||| |
|
|
| T |
8546165 |
gttgtggccctttaaggtcatttccggtgttaatgacaaaccgacaattcttgtgaactacaagggtgaggaaaagcactttgttgctgaagaaatatca |
8546066 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgatt |
211 |
Q |
| |
|
||| |||| || || ||||||| |||||||||||| |||||||| | | ||||| ||||||||||| ||||||| || |||||||| ||||||| |
|
|
| T |
8546065 |
tctgtgatcctctcacagatgcgagagattgcagaggcatttttggagtcacctgttaagaatgcagtgattactgtacctgcttattttaatgatt |
8545969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 28911115 - 28910812
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||| |||||||||||||||| |||| | |||||||| ||| |||| ||||| |||||||||| ||||||||| | ||||||| || ||||| ||| |
|
|
| T |
28911115 |
gttgtcgccgttcaaggtcattgccggtgtcaatgacaaccccatgatatctgtcaagtacaaggatcaggagaagaaattatgtgctgaggaaatctca |
28911016 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
||| || |||| ||||||| || |||||||||| |||||||||| |||| || |||||||||||| |||||||| || | | |||||||||||||| | |
|
|
| T |
28911015 |
tctgtggttctctcaaagattcgcgagattgcagtgacatttttggaattgcccgtcaagaatgcaattgttactttgactggttatttcaatgattctt |
28910916 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaa |
314 |
Q |
| |
|
|| |||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||| | |||||||| ||||||| ||||||| || || || |
|
|
| T |
28910915 |
agaggaaagccaccatagatgctggtgccattgtcaggcttaatgttatgcggataatcaatgagctcactgctgtagctatttcatatggcctcgacaa |
28910816 |
T |
|
| Q |
315 |
gaga |
318 |
Q |
| |
|
|||| |
|
|
| T |
28910815 |
gaga |
28910812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 319
Target Start/End: Original strand, 16657153 - 16657456
Alignment:
| Q |
16 |
ttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcat |
115 |
Q |
| |
|
|||||||| |||||||||||| ||||| ||||||||||||| ||||| || || |||| ||||| || |||| || | ||||| || |||||||||| |
|
|
| T |
16657153 |
ttgtggccattcaaggtcattgccggagtgaatgacaaaccaatgattactcttcagtataagggtcaagagagccaattttgtgctgaggaaatatcat |
16657252 |
T |
|
| Q |
116 |
ctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatca |
215 |
Q |
| |
|
||||||| || ||||||||||| || |||| ||| ||||| || | | |||||||||||||| |||||||||||||| ||||| |||||||||| || |
|
|
| T |
16657253 |
ctatgatccttacaaagatgcgagaagttgctgaggcatttatggagtcgcctgtcaagaatgctgttgttactgtgccagcttacttcaatgattcgca |
16657352 |
T |
|
| Q |
216 |
gcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaag |
315 |
Q |
| |
|
||| |||||||| |||||||||||||||| ||||| ||| |||| || || ||||||||||| |||||||||||||||||||||||||| || ||| |
|
|
| T |
16657353 |
gcgaaaagccaccatagatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttgacaag |
16657452 |
T |
|
| Q |
316 |
agaa |
319 |
Q |
| |
|
|||| |
|
|
| T |
16657453 |
agaa |
16657456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 46 - 346
Target Start/End: Complemental strand, 12235191 - 12234891
Alignment:
| Q |
46 |
aatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattg |
145 |
Q |
| |
|
|||||||||||| ||||| ||| ||||||||||| | |||||||| |||||| |||||||| ||||||||||| | || ||||||||||| || || | |
|
|
| T |
12235191 |
aatgacaaacccatgattattgtcaagtacaagggtcgagagaagcagctatgtcccgaagaagtatcatctatggtactcacaaagatgcgagaaatcg |
12235092 |
T |
|
| Q |
146 |
cagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccat |
245 |
Q |
| |
|
| ||| ||| ||| |||||||| || ||||||||||||||||| ||||| |||||||||||||||| ||| || ||||| ||| |||||||||||| ||| |
|
|
| T |
12235091 |
ctgaggcatatttacaatttccagttaagaatgcagttgttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcat |
12234992 |
T |
|
| Q |
246 |
tgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaactaactctgtgcgaggacgaaatatt |
345 |
Q |
| |
|
|||||| || ||||||||| | |||| || ||||||| || || ||| ||||||||||||| || ||||||||| | | ||| ||| |||||||||| |
|
|
| T |
12234991 |
tgctggcctcaatgttatgagggtaatgaacgaacccatggcagccgctgttgcatatggtcttgacaagagaactgattgtgttggagaacgaaatatt |
12234892 |
T |
|
| Q |
346 |
t |
346 |
Q |
| |
|
| |
|
|
| T |
12234891 |
t |
12234891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 19 - 318
Target Start/End: Original strand, 12245045 - 12245344
Alignment:
| Q |
19 |
tggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatcta |
118 |
Q |
| |
|
|||||||||||||||| | | || | ||||||||||| | ||| ||||||| ||||| || ||||||||||| |||||||| |||||| ||||||||| |
|
|
| T |
12245045 |
tggccgttcaaggtcactgctggtgtcaatgacaaaccaataattactgttaactacaaaggccaggagaagcagctatgtgctgaagaagtatcatcta |
12245144 |
T |
|
| Q |
119 |
tgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcg |
218 |
Q |
| |
|
|| | |||||||||||||| || ||||| ||| ||| ||| ||| || || |||||||| ||||||||||| || |||||||| | ||||| |||||| |
|
|
| T |
12245145 |
tggtactaacaaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgctgttgttactgtacctgcttattttagtgattctcagcg |
12245244 |
T |
|
| Q |
219 |
gaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagaga |
318 |
Q |
| |
|
||||| || |||||||||| | |||||||| || ||||||||| | |||| ||||||||||||||||||||| |||||||||| || ||||||||| |
|
|
| T |
12245245 |
aaaagcaacgatagatgctggctcaattgctggtctcaatgttatgagggtaatgaatgaacccactgctgcagctgttgcatatggccttgaaaagaga |
12245344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 15 - 305
Target Start/End: Original strand, 16661627 - 16661917
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
|||||||||||||||||| ||| | || | ||||||||||| |||| ||||||||||||||| |||||||||| ||| |||||||| ||||| ||| |
|
|
| T |
16661627 |
gttgtggccgttcaaggttattgctggtgttaatgacaaacctacgattagtgttaagtacaagggtcaggagaagctcctttgtgccgaggaaatctca |
16661726 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
||||| | || ||||| ||| ||| |||||||| | | |||| ||| || || || ||||||||||| ||||| || |||||||| || |||| || |
|
|
| T |
16661727 |
tctattgtcctcacaaacatgaaggaggttgcagaggcttatttggaatcaccggttaaaaatgcagttgtcactgttcctgcttattttaacgattctc |
16661826 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16661827 |
agcgaaaagccaccatggatgctggtgccattgctggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatgg |
16661917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 46 - 318
Target Start/End: Complemental strand, 11999896 - 11999624
Alignment:
| Q |
46 |
aatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattg |
145 |
Q |
| |
|
||||||||||| | ||| ||||||||||||| || ||||||||||| |||||||| |||||| ||||||||||| | ||||| |||||||| || |||| |
|
|
| T |
11999896 |
aatgacaaaccaataattactgttaagtacaaaggccaggagaagcagctatgtgctgaagaagtatcatctatggtactaacgaagatgcgagaaattg |
11999797 |
T |
|
| Q |
146 |
cagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccat |
245 |
Q |
| |
|
| ||| ||| ||| ||| || || ||||||| ||||||||||| || |||||||| | ||||| ||| || ||||||||| ||||||| ||||| || |
|
|
| T |
11999796 |
ctgaggcatatttagaatcaccggtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaat |
11999697 |
T |
|
| Q |
246 |
tgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagaga |
318 |
Q |
| |
|
|||||| | ||||||| | | |||| |||||||||||||||||| || |||||||||| || || |||||| |
|
|
| T |
11999696 |
tgctggcatcaatgttataagggtaatgaatgaacccactgctgcaactgttgcatatggccttgacaagaga |
11999624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 47 - 321
Target Start/End: Complemental strand, 14703909 - 14703635
Alignment:
| Q |
47 |
atgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattgc |
146 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||| ||||||||| | || | |||||||||| ||||||||||| | || |||||||| || ||||| |
|
|
| T |
14703909 |
atgacaaacccatgattacggttaagtacaaggatcaggagaagaagctctatgccgaagaagtatcatctatggtactggtgaagatgcgagaaattgc |
14703810 |
T |
|
| Q |
147 |
agagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccatt |
246 |
Q |
| |
|
||||||| ||| | | |||| ||||||||||||||||| ||||| |||||||| | ||||| ||| | ||||||||| | |||||||||| ||| |
|
|
| T |
14703809 |
tgagacatatttagagtcaactgttaagaatgcagttgttacggtgcctgcttattttagtgattctcaaagaaaagccactatggatgctggtgttatt |
14703710 |
T |
|
| Q |
247 |
gctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaact |
321 |
Q |
| |
|
|| || || ||||||||| | |||| |||||||| || |||||||||||||||||||| || || ||||||||| |
|
|
| T |
14703709 |
gccggcctcaatgttatgagggtaatgaatgaacctacagctgcagctattgcatatggccttgacaagagaact |
14703635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 321
Target Start/End: Complemental strand, 7542728 - 7542453
Alignment:
| Q |
46 |
aatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattg |
145 |
Q |
| |
|
||||||| |||| ||||| | ||||||||||||| |||||||| || || ||| ||||| ||||||||||| | || ||||||||||| || |||| |
|
|
| T |
7542728 |
aatgacagacccatgattaccgttaagtacaaggatcaggagaaacaactccatgctgaagaggtatcatctatggtactcacaaagatgcgagaaattg |
7542629 |
T |
|
| Q |
146 |
cagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccat |
245 |
Q |
| |
|
| ||| | | ||| || |||| | |||||||||||||||||| || |||||||| ||||||| ||| || ||||||||| ||||||| |||||||| |
|
|
| T |
7542628 |
ctgagtcgtatttagaaacaactgtgacgaatgcagttgttactgtacctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccat |
7542529 |
T |
|
| Q |
246 |
tgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaact |
321 |
Q |
| |
|
|||||| || ||||||||| | ||| |||||||| ||||| |||||| |||||||||| || || ||||||||| |
|
|
| T |
7542528 |
tgctggcctcaatgttatgagggcaatgaatgaacctactgccgcagctgttgcatatggccttgacaagagaact |
7542453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 305
Target Start/End: Original strand, 12258247 - 12258506
Alignment:
| Q |
46 |
aatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattg |
145 |
Q |
| |
|
|||| ||||||| ||||| | || ||||||||| || |||||||| || |||||||| ||| |||||||| || | | ||||||||||| || |||| |
|
|
| T |
12258247 |
aatggcaaacccatgattacggtaaagtacaagaatcaagagaagcagctttgtgccgaggaagtatcatctgtggtattgacaaagatgcgagaaattg |
12258346 |
T |
|
| Q |
146 |
cagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccat |
245 |
Q |
| |
|
| ||| ||| ||| ||| || || ||||||||||||||||||||||| || ||||| | ||||| || ||||||||||| |||||| ||| || |
|
|
| T |
12258347 |
ctgaggcatatttagaatcacccgttaagaatgcagttgttactgtgcctgcatattttagtgattcacaaaggaaagccactatagatgtgggtaatat |
12258446 |
T |
|
| Q |
246 |
tgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatgg |
305 |
Q |
| |
|
|| ||| || |||||||||||||| | |||||||| |||||||||||| |||||||||| |
|
|
| T |
12258447 |
tgttggcctgaatgttatgaagatattaaatgaacctactgctgcagcttttgcatatgg |
12258506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 247
Target Start/End: Complemental strand, 43625855 - 43625713
Alignment:
| Q |
106 |
gaaatatcatctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcct---gtcaagaatgcagttgttactgtgccggcttatt |
202 |
Q |
| |
|
|||||||| |||||||| || ||||||||||| ||| ||||||||| |||||| ||| ||| || ||||||||||||||||| ||||| ||||| | |
|
|
| T |
43625855 |
gaaatatcgtctatgatcctcacaaagatgcgagaggttgcagagaaattttt--aatgtccccccgtaaagaatgcagttgttaccgtgcctgcttact |
43625758 |
T |
|
| Q |
203 |
tcaatgattatcagcggaaagccactgtagatgctggtgccattg |
247 |
Q |
| |
|
||||||||| |||||| |||||||| |||||| ||||| ||||| |
|
|
| T |
43625757 |
tcaatgattctcagcgaaaagccaccatagatgttggtgtcattg |
43625713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 318
Target Start/End: Original strand, 34466459 - 34466731
Alignment:
| Q |
46 |
aatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatctatgattctaacaaagatgcgtgagattg |
145 |
Q |
| |
|
|||||||| || ||||||| ||||||| ||||| |||||||||||||||||||| || ||||| ||||||||||| || |||||||||| || | || |
|
|
| T |
34466459 |
aatgacaagccaatgatttcccttaagtataagggtcaggagaagcacctatgtgctgaggaaatctcatctatgatcctttcaaagatgcgggatactg |
34466558 |
T |
|
| Q |
146 |
cagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccat |
245 |
Q |
| |
|
||||| || |||| ||| || | |||||||||||| | || ||||| |||||||| ||||||| |||||| ||||| ||||| ||||||||| | || |
|
|
| T |
34466559 |
cagaggaatatttggaatcaccaattaagaatgcagttatcaccgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactat |
34466658 |
T |
|
| Q |
246 |
tgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagaga |
318 |
Q |
| |
|
|||||| ||| ||||| || | |||||||||||||||||||||||||||||||||||||| || || |||||| |
|
|
| T |
34466659 |
tgctggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgacaagaga |
34466731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 15595571 - 15595308
Alignment:
| Q |
13 |
aagttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatat |
112 |
Q |
| |
|
||||||||||| |||||||||||| || |||||||||||||| ||||| |||||| |||||||| || || |||| | | ||||| || ||||||| |
|
|
| T |
15595571 |
aagttgtggccattcaaggtcatt---ggtgtgaatgacaaacccatgattattgttaaatacaagggtcaagaaaagcgcttttgtgctgaggaaatat |
15595475 |
T |
|
| Q |
113 |
catctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgatta |
212 |
Q |
| |
|
| ||||||||||| | ||||||||| ||| ||||||||| |||||| | | ||| || || |||||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
15595474 |
cgtctatgattctcaaaaagatgcgagaggttgcagagaaattttt--agtctcccgtaaacaatgcagttgttaccgtgcctgcttatctcaatgattc |
15595377 |
T |
|
| Q |
213 |
tcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacc |
281 |
Q |
| |
|
||| || ||||||||| ||||||| |||||||||||||| ||| ||||||| | ||||||||||||| |
|
|
| T |
15595376 |
tcaacgaaaagccactatagatgcaggtgccattgctggccttaatgttatacgggtaatcaatgaacc |
15595308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 319
Target Start/End: Original strand, 4678345 - 4678497
Alignment:
| Q |
167 |
ctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaa |
266 |
Q |
| |
|
|||| ||||||| |||||||||||||| || || |||||||||| ||| || ||||| || |||||||||||||||||||||| ||| |||| || | |
|
|
| T |
4678345 |
ctgtgaagaatgtcgttgttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtcattca |
4678444 |
T |
|
| Q |
267 |
gataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaa |
319 |
Q |
| |
|
|||||||| ||||| |||| ||||||||||||||||||| | || ||||||| |
|
|
| T |
4678445 |
aataatcaacgaacctactgttgcagctattgcatatggttttgacaagagaa |
4678497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 319
Target Start/End: Original strand, 9335526 - 9335830
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| |||||||| ||||| || | ||||||||||| ||||| ||||||| |||||||| || ||||||||| | ||||| || |||||||| |
|
|
| T |
9335526 |
gttgtggccattcaaggttatttctggtgttaatgacaaacctatgattactgttaactacaagggtcaagagaagcacttttgtgctgaggaaatatct |
9335625 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
|||||| | || ||||||||| | ||| |||| ||| ||| |||| | || ||||||||||| |||||||| ||||| ||||| |||||||||| || |
|
|
| T |
9335626 |
tctatgttgcttacaaagatgagagaggttgcggaggcatatttggggtcgccggtcaagaatgccgttgttaccgtgccagcttacttcaatgattctc |
9335725 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaa |
314 |
Q |
| |
|
|||| || ||||| ||||||||||| | |||||||| ||| |||| || ||||||||||||||| ||||||||||||||||||||||| || || || |
|
|
| T |
9335726 |
agcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgataa |
9335825 |
T |
|
| Q |
315 |
gagaa |
319 |
Q |
| |
|
||||| |
|
|
| T |
9335826 |
gagaa |
9335830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 30775785 - 30775482
Alignment:
| Q |
15 |
gttgtggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatca |
114 |
Q |
| |
|
||||||||| |||||||| |||| || | |||||||||||| ||||||| |||||| |||||| |||||||| | ||| |||||||| ||||| ||| |
|
|
| T |
30775785 |
gttgtggccattcaaggttgtttctggtgttaatgacaaacccatgatttcccttaagttcaagggccaggagaaactcctctgtgccgaggaaatttca |
30775686 |
T |
|
| Q |
115 |
tctatgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatc |
214 |
Q |
| |
|
|| || | || ||||| ||| | ||||||||||||| | |||| ||| || || || ||||||||| | |||||||| ||||||||||||||| | |
|
|
| T |
30775685 |
tcaatagtcctcacaaatatgagagagattgcagagatgtatttggaatccccagttaaaaatgcagttatcactgtgcctgcttatttcaatgatgcac |
30775586 |
T |
|
| Q |
215 |
agcggaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaa |
314 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||||||| ||| ||||||||| ||||| ||||| |||||||| ||||||||||||||||| || || || |
|
|
| T |
30775585 |
agcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaa |
30775486 |
T |
|
| Q |
315 |
gaga |
318 |
Q |
| |
|
|||| |
|
|
| T |
30775485 |
gaga |
30775482 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 35132975 - 35132678
Alignment:
| Q |
19 |
tggccgttcaaggtcatttccggattgaatgacaaacccgtgatttctgttaagtacaagggacaggagaagcacctatgtgccgaagaaatatcatcta |
118 |
Q |
| |
|
||||| |||||||||| | |||| | |||||||||||| ||||| | ||||||||||||| |||| ||||| || | ||| |||||| ||||||| | |
|
|
| T |
35132975 |
tggccattcaaggtcactgccggtgtaaatgacaaacccatgattacggttaagtacaaggatgaggaaaagcaactctatgcggaagaagtatcatcca |
35132876 |
T |
|
| Q |
119 |
tgattctaacaaagatgcgtgagattgcagagacatttttgcaatttcctgtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcg |
218 |
Q |
| |
|
|| | || ||||||||||| || ||||||| ||| ||| ||| |||| ||||||||||||||||||||||| |||||||| | ||||| ||| || |
|
|
| T |
35132875 |
tggtactcacaaagatgcgagaaattgcagg--catatttagaatcaactgttaagaatgcagttgttactgtgcctgcttattttagtgattctcaacg |
35132778 |
T |
|
| Q |
219 |
gaaagccactgtagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagaga |
318 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| | ||||||||| |||| |||||||| ||||| ||||| |||||||||| || || |||||| |
|
|
| T |
35132777 |
aaaagccactatagatgctggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactgccgcagcggttgcatatggccttgacaagaga |
35132678 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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