View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1499_low_34 (Length: 315)

Name: NF1499_low_34
Description: NF1499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1499_low_34
NF1499_low_34
[»] chr8 (41 HSPs)
chr8 (1-186)||(30999548-30999733)
chr8 (1-186)||(43275423-43275609)
chr8 (1-186)||(40918755-40918941)
chr8 (1-186)||(40058327-40058515)
chr8 (1-186)||(7146978-7147166)
chr8 (1-186)||(2539954-2540143)
chr8 (4-186)||(11174250-11174435)
chr8 (1-186)||(37345636-37345824)
chr8 (1-186)||(11646349-11646537)
chr8 (5-186)||(3585516-3585700)
chr8 (1-186)||(36068145-36068333)
chr8 (4-185)||(27035063-27035245)
chr8 (1-186)||(20546317-20546499)
chr8 (13-186)||(13880991-13881167)
chr8 (5-162)||(35866705-35866862)
chr8 (220-299)||(38296684-38296763)
chr8 (6-155)||(26628845-26628997)
chr8 (6-112)||(27563896-27564002)
chr8 (1-156)||(28568017-28568171)
chr8 (1-156)||(28575610-28575764)
chr8 (2-156)||(28562519-28562673)
chr8 (53-186)||(28326734-28326866)
chr8 (6-90)||(10180897-10180981)
chr8 (6-132)||(45400799-45400927)
chr8 (49-184)||(39151473-39151607)
chr8 (12-186)||(30906724-30906902)
chr8 (5-156)||(37510363-37510519)
chr8 (36-152)||(3720719-3720836)
chr8 (36-152)||(11163305-11163422)
chr8 (36-152)||(12248854-12248971)
chr8 (186-226)||(45278717-45278757)
chr8 (186-225)||(27034995-27035034)
chr8 (187-225)||(36068078-36068116)
chr8 (186-224)||(43275637-43275675)
chr8 (36-152)||(167561-167678)
chr8 (186-223)||(3585451-3585488)
chr8 (190-223)||(7146913-7146946)
chr8 (186-223)||(8697914-8697951)
chr8 (186-223)||(40918969-40919006)
chr8 (186-223)||(41307977-41308014)
chr8 (36-152)||(43553078-43553195)
[»] chr3 (49 HSPs)
chr3 (1-186)||(36881347-36881533)
chr3 (1-186)||(46694134-46694322)
chr3 (1-186)||(13364908-13365096)
chr3 (1-186)||(3383141-3383329)
chr3 (5-186)||(23087959-23088143)
chr3 (1-186)||(198920-199108)
chr3 (1-186)||(19241692-19241880)
chr3 (1-186)||(29375203-29375385)
chr3 (1-186)||(43750202-43750389)
chr3 (1-162)||(18355892-18356053)
chr3 (12-130)||(13703338-13703454)
chr3 (6-155)||(48436325-48436472)
chr3 (1-130)||(31873887-31874015)
chr3 (14-160)||(27707026-27707172)
chr3 (1-156)||(54086651-54086805)
chr3 (5-151)||(48963223-48963368)
chr3 (1-86)||(48820508-48820593)
chr3 (32-156)||(52009105-52009229)
chr3 (1-162)||(6901655-6901814)
chr3 (1-119)||(32835013-32835131)
chr3 (6-162)||(24064315-24064468)
chr3 (38-186)||(37781002-37781152)
chr3 (14-183)||(53559648-53559819)
chr3 (53-156)||(46188863-46188967)
chr3 (12-186)||(1455186-1455360)
chr3 (41-186)||(19896994-19897139)
chr3 (5-62)||(26783661-26783718)
chr3 (32-186)||(52805082-52805238)
chr3 (18-110)||(37293555-37293644)
chr3 (36-156)||(23771326-23771447)
chr3 (53-136)||(40228280-40228361)
chr3 (36-135)||(43159867-43159967)
chr3 (186-226)||(198852-198892)
chr3 (186-230)||(38805238-38805282)
chr3 (36-134)||(52173786-52173885)
chr3 (36-110)||(32980679-32980753)
chr3 (186-224)||(36881281-36881319)
chr3 (186-223)||(3383076-3383113)
chr3 (36-152)||(3643286-3643402)
chr3 (186-223)||(12094582-12094619)
chr3 (132-186)||(13702834-13702890)
chr3 (186-223)||(29375138-29375175)
chr3 (36-152)||(33874636-33874753)
chr3 (125-186)||(44522506-44522567)
chr3 (36-152)||(48152024-48152141)
chr3 (104-148)||(26105136-26105179)
chr3 (186-226)||(46694350-46694390)
chr3 (34-82)||(51584442-51584490)
chr3 (41-152)||(55141566-55141678)
[»] chr7 (34 HSPs)
chr7 (4-186)||(47110516-47110700)
chr7 (1-186)||(25614377-25614563)
chr7 (1-186)||(10981573-10981761)
chr7 (1-186)||(27813876-27814064)
chr7 (1-186)||(36453148-36453336)
chr7 (1-186)||(40349025-40349214)
chr7 (12-186)||(16662161-16662335)
chr7 (12-186)||(17636521-17636695)
chr7 (12-186)||(3091582-3091755)
chr7 (6-112)||(27941013-27941119)
chr7 (6-186)||(16360449-16360624)
chr7 (12-186)||(7743433-7743608)
chr7 (35-186)||(3498813-3498966)
chr7 (12-110)||(24456800-24456898)
chr7 (35-156)||(8380040-8380157)
chr7 (53-185)||(27021566-27021699)
chr7 (186-225)||(25614591-25614630)
chr7 (110-186)||(27942173-27942251)
chr7 (38-152)||(33257922-33258037)
chr7 (186-223)||(40348960-40348997)
chr7 (36-152)||(46563210-46563327)
chr7 (40-135)||(31815172-31815268)
chr7 (36-135)||(24283621-24283719)
chr7 (6-113)||(35112438-35112545)
chr7 (116-186)||(37983221-37983289)
chr7 (223-277)||(43002341-43002396)
chr7 (50-92)||(6737252-6737294)
chr7 (36-152)||(8965987-8966104)
chr7 (186-223)||(10981508-10981545)
chr7 (186-223)||(25060149-25060186)
chr7 (186-223)||(27813811-27813848)
chr7 (125-162)||(28200298-28200335)
chr7 (50-90)||(41480639-41480679)
chr7 (36-135)||(42841970-42842070)
[»] chr5 (37 HSPs)
chr5 (1-186)||(40886634-40886822)
chr5 (1-186)||(12806877-12807065)
chr5 (1-186)||(30720516-30720704)
chr5 (1-186)||(36561123-36561311)
chr5 (5-186)||(10285086-10285269)
chr5 (1-186)||(25773714-25773902)
chr5 (12-186)||(37900658-37900836)
chr5 (1-186)||(25683253-25683440)
chr5 (12-177)||(16983334-16983499)
chr5 (1-134)||(23097748-23097880)
chr5 (1-186)||(734363-734549)
chr5 (5-162)||(39070974-39071131)
chr5 (6-186)||(16054179-16054359)
chr5 (40-186)||(7277486-7277634)
chr5 (6-186)||(30402991-30403174)
chr5 (5-156)||(11319656-11319805)
chr5 (38-112)||(1056684-1056758)
chr5 (8-86)||(11795314-11795392)
chr5 (6-87)||(26168075-26168156)
chr5 (32-106)||(11797694-11797768)
chr5 (94-186)||(1056402-1056493)
chr5 (14-149)||(15629239-15629376)
chr5 (128-186)||(23098386-23098446)
chr5 (50-91)||(12305687-12305728)
chr5 (36-152)||(18393052-18393169)
chr5 (33-160)||(21638864-21638990)
chr5 (36-152)||(39893890-39894007)
chr5 (36-135)||(12784540-12784640)
chr5 (36-151)||(25785928-25786044)
chr5 (186-226)||(30720732-30720772)
chr5 (35-152)||(7466202-7466320)
chr5 (186-228)||(15305228-15305270)
chr5 (35-135)||(12723057-12723158)
chr5 (186-223)||(12807093-12807130)
chr5 (186-223)||(15304822-15304859)
chr5 (186-223)||(25773649-25773686)
chr5 (36-152)||(32389007-32389124)
[»] chr1 (43 HSPs)
chr1 (1-186)||(40783681-40783869)
chr1 (5-186)||(47037880-47038062)
chr1 (1-186)||(23045303-23045491)
chr1 (1-186)||(321691-321879)
chr1 (1-186)||(284398-284586)
chr1 (1-186)||(23526305-23526492)
chr1 (1-186)||(24771930-24772117)
chr1 (1-186)||(33082810-33082997)
chr1 (12-186)||(46771702-46771880)
chr1 (1-186)||(27210979-27211176)
chr1 (6-180)||(31003816-31003992)
chr1 (6-186)||(18396760-18396942)
chr1 (1-150)||(51064778-51064927)
chr1 (6-156)||(27143043-27143191)
chr1 (12-110)||(40261320-40261418)
chr1 (6-179)||(34458753-34458926)
chr1 (1-129)||(40562310-40562437)
chr1 (12-186)||(1837860-1838039)
chr1 (6-183)||(24876633-24876809)
chr1 (14-112)||(40052501-40052599)
chr1 (32-183)||(31061514-31061662)
chr1 (93-186)||(52037241-52037332)
chr1 (49-186)||(52478033-52478170)
chr1 (6-130)||(23166880-23167004)
chr1 (46-186)||(3657142-3657282)
chr1 (6-108)||(14925610-14925710)
chr1 (13-71)||(1749457-1749515)
chr1 (97-186)||(1749372-1749462)
chr1 (76-186)||(7765078-7765186)
chr1 (13-68)||(14350510-14350565)
chr1 (6-104)||(25929248-25929346)
chr1 (186-226)||(284330-284370)
chr1 (186-226)||(23045519-23045559)
chr1 (85-156)||(14351869-14351940)
chr1 (128-186)||(40562733-40562792)
chr1 (186-225)||(41959076-41959115)
chr1 (50-108)||(49756684-49756742)
chr1 (186-223)||(3943060-3943097)
chr1 (186-223)||(9588670-9588707)
chr1 (186-223)||(13985007-13985044)
chr1 (186-223)||(44227848-44227885)
chr1 (186-223)||(47038090-47038127)
chr1 (186-222)||(27211204-27211240)
[»] chr6 (34 HSPs)
chr6 (1-186)||(13757273-13757460)
chr6 (1-186)||(8626547-8626735)
chr6 (1-186)||(1605644-1605831)
chr6 (1-186)||(7761366-7761553)
chr6 (1-186)||(29260257-29260445)
chr6 (1-186)||(4129492-4129679)
chr6 (2-186)||(31559763-31559948)
chr6 (1-186)||(30734507-30734695)
chr6 (1-186)||(15064719-15064906)
chr6 (1-185)||(17942511-17942696)
chr6 (5-184)||(8235691-8235874)
chr6 (6-185)||(26860835-26861012)
chr6 (14-143)||(20398275-20398406)
chr6 (14-186)||(3798168-3798339)
chr6 (51-186)||(14287054-14287190)
chr6 (138-186)||(30734772-30734820)
chr6 (77-186)||(11370586-11370697)
chr6 (32-101)||(847831-847900)
chr6 (12-85)||(1814762-1814835)
chr6 (36-152)||(31244834-31244951)
chr6 (116-186)||(21277574-21277645)
chr6 (37-152)||(17251341-17251457)
chr6 (50-152)||(23777349-23777452)
chr6 (94-156)||(30235425-30235487)
chr6 (140-186)||(33845449-33845495)
chr6 (50-83)||(879317-879350)
chr6 (186-223)||(1605579-1605616)
chr6 (186-223)||(7761301-7761338)
chr6 (36-113)||(22784793-22784870)
chr6 (186-223)||(29260192-29260229)
chr6 (36-135)||(7170191-7170291)
chr6 (36-151)||(19811995-19812111)
chr6 (36-135)||(24356156-24356256)
chr6 (36-135)||(24948282-24948382)
[»] chr4 (48 HSPs)
chr4 (1-186)||(12071626-12071813)
chr4 (1-186)||(40122511-40122697)
chr4 (1-186)||(24706271-24706459)
chr4 (1-186)||(25704716-25704904)
chr4 (5-186)||(22321296-22321479)
chr4 (1-186)||(21310490-21310674)
chr4 (1-186)||(50767929-50768115)
chr4 (1-186)||(14261109-14261297)
chr4 (1-186)||(44568902-44569090)
chr4 (1-186)||(21661559-21661747)
chr4 (1-186)||(21670323-21670511)
chr4 (1-186)||(20249038-20249224)
chr4 (22-186)||(34324627-34324794)
chr4 (4-179)||(21064834-21065011)
chr4 (11-186)||(31892303-31892475)
chr4 (5-162)||(19692814-19692971)
chr4 (5-162)||(19703399-19703556)
chr4 (12-186)||(6128984-6129160)
chr4 (6-183)||(18507295-18507472)
chr4 (6-185)||(32543547-32543727)
chr4 (54-186)||(20714426-20714560)
chr4 (6-71)||(50839060-50839125)
chr4 (6-108)||(48652370-48652472)
chr4 (38-143)||(1146143-1146249)
chr4 (35-113)||(38617857-38617935)
chr4 (186-223)||(22321507-22321544)
chr4 (36-152)||(30939197-30939314)
chr4 (36-152)||(1615140-1615255)
chr4 (138-186)||(1988100-1988150)
chr4 (16-86)||(51777772-51777841)
chr4 (36-152)||(6150736-6150853)
chr4 (186-223)||(12071561-12071598)
chr4 (186-223)||(14261044-14261081)
chr4 (54-87)||(17038377-17038410)
chr4 (186-223)||(21310425-21310462)
chr4 (186-223)||(24706487-24706524)
chr4 (186-223)||(25704651-25704688)
chr4 (124-161)||(26676714-26676751)
chr4 (186-223)||(34324823-34324860)
chr4 (84-156)||(38865993-38866066)
chr4 (186-223)||(40122725-40122762)
chr4 (190-223)||(44568837-44568870)
chr4 (116-185)||(51777687-51777755)
chr4 (36-113)||(56576228-56576305)
chr4 (4-72)||(8735399-8735467)
chr4 (6-70)||(20714349-20714413)
chr4 (36-72)||(26906555-26906591)
chr4 (36-143)||(37551759-37551867)
[»] chr2 (38 HSPs)
chr2 (1-186)||(1646354-1646540)
chr2 (1-186)||(3518973-3519160)
chr2 (1-186)||(23366854-23367042)
chr2 (1-186)||(39938235-39938423)
chr2 (1-174)||(22388162-22388335)
chr2 (1-186)||(1102568-1102754)
chr2 (1-186)||(37673767-37673949)
chr2 (1-186)||(12969764-12969951)
chr2 (6-186)||(39561924-39562097)
chr2 (7-186)||(34242042-34242221)
chr2 (17-176)||(4917839-4917998)
chr2 (6-186)||(14779844-14780023)
chr2 (1-90)||(40756935-40757024)
chr2 (14-186)||(19976397-19976568)
chr2 (21-102)||(28110139-28110220)
chr2 (6-112)||(37284547-37284652)
chr2 (38-113)||(28401396-28401471)
chr2 (12-70)||(32838964-32839022)
chr2 (32-137)||(1002786-1002891)
chr2 (6-86)||(36447426-36447506)
chr2 (94-186)||(18078121-18078215)
chr2 (53-162)||(24777758-24777867)
chr2 (77-186)||(32840273-32840387)
chr2 (36-152)||(9370013-9370130)
chr2 (36-135)||(13849819-13849919)
chr2 (35-186)||(14117660-14117812)
chr2 (191-223)||(34222058-34222090)
chr2 (36-135)||(43077331-43077431)
chr2 (186-223)||(1102503-1102540)
chr2 (186-223)||(3518908-3518945)
chr2 (186-223)||(12969979-12970016)
chr2 (36-152)||(13753994-13754111)
chr2 (32-133)||(27901005-27901106)
chr2 (36-152)||(28967318-28967435)
chr2 (186-223)||(34224394-34224431)
chr2 (186-222)||(23366790-23366826)
chr2 (50-90)||(32323706-32323746)
chr2 (36-135)||(32854884-32854984)
[»] scaffold1770 (1 HSPs)
scaffold1770 (1-186)||(227-414)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-186)||(291-475)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-186)||(45519-45706)
[»] scaffold1431 (1 HSPs)
scaffold1431 (79-186)||(1-111)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-185)||(65199-65375)
[»] scaffold0343 (1 HSPs)
scaffold0343 (6-156)||(6930-7079)
[»] scaffold0168 (1 HSPs)
scaffold0168 (6-134)||(7788-7916)
[»] scaffold0076 (1 HSPs)
scaffold0076 (5-155)||(15351-15499)
[»] scaffold0056 (2 HSPs)
scaffold0056 (12-106)||(71231-71325)
scaffold0056 (116-186)||(70889-70961)
[»] scaffold0003 (1 HSPs)
scaffold0003 (36-152)||(252633-252750)
[»] scaffold0060 (1 HSPs)
scaffold0060 (32-160)||(10837-10964)
[»] scaffold0036 (1 HSPs)
scaffold0036 (36-152)||(23175-23292)
[»] scaffold0939 (1 HSPs)
scaffold0939 (11-85)||(1110-1184)
[»] scaffold0006 (1 HSPs)
scaffold0006 (36-152)||(96146-96263)
[»] scaffold0236 (1 HSPs)
scaffold0236 (37-152)||(14335-14451)
[»] scaffold0009 (1 HSPs)
scaffold0009 (36-103)||(147263-147330)
[»] scaffold0257 (2 HSPs)
scaffold0257 (186-223)||(23467-23504)
scaffold0257 (186-226)||(23876-23916)


Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30999548 - 30999733
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999548 gtccattttagagaataattttgtttcacaatacttgttactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 30999647  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999648 tgtagagagagaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 30999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 43275423 - 43275609
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43275423 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattatcttgtcaataatacccttgcatatttat 43275522  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275523 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 43275609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 40918755 - 40918941
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918755 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 40918854  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  40918855 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatgttttcataaaaaataacaaaat 40918941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 40058327 - 40058515
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058327 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 40058426  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40058427 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 40058515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7147166 - 7146978
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147166 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 7147067  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  7147066 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaat 7146978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 2539954 - 2540143
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2539954 gtccattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 2540053  T
Q  101 tgt--agagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  2540054 tgtagagagagaaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 2540143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 11174250 - 11174435
Alignment:
Q  4 cattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174250 cattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 11174349  T
Q  104 agagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11174350 agagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 11174435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 37345824 - 37345636
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37345824 gtccattttagagaataattttgtttcacaatacttgtcattttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 37345725  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  37345724 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaat 37345636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 11646349 - 11646537
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11646349 gtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttgcatatttat 11646448  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  11646449 tgtagagagagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaat 11646537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 3585700 - 3585516
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3585700 attttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttgcatatttattgta 3585601  T
Q  105 gagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    ||||||  || || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3585600 gagagaggaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaat 3585516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 36068333 - 36068145
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36068333 gtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttgcatatttat 36068234  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  36068233 tgtagagagagaaaaaagtaaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaat 36068145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 185
Target Start/End: Complemental strand, 27035245 - 27035063
Alignment:
Q  4 cattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 103  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  27035245 cattttggagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttacatatttactgt 27035146  T
Q  104 agagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa-acacacatattttcatcaaaaataacaaaa 185  Q
    ||||||| || ||||| |||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| ||||    
T  27035145 agagagagaaaaaatagaatgaaataataaatggttaagggtattatagaaacacagacataatttcatcaaaaataaaaaaa 27035063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20546317 - 20546499
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20546317 gtccattttgaagaataattttgtttcacaatacttgtcactttcaggtttcaatgcaacattaattattgtcttgtcaataatacccttacatatttat 20546416  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||   ||| ||||| |||||||||||||||  |||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  20546417 tgtagag---aaaaaaatataatgaaataataaattgttaagggtatcatataaaacacacataatttcatcaaaaataacaaaat 20546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 13880991 - 13881167
Alignment:
Q  13 gaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaa 112  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||  |||| |||||||  ||| |  |||||||||||||||| |    
T  13880991 gaataattttgtttcaaattacttgtcactttcaagtttcaatgcaatattaattattgatttgttaataataatcttactaatttattgtagagagaga 13881090  T
Q  113 acaaataaaatgaaataataaatgattaagggtattatag---aaaacacacatattttcatcaaaaataacaaaat 186  Q
    || |||| ||||||||||||||||||||||||||||||||   ||||| |||| | |||||||||||||||||||||    
T  13881091 actaatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaat 13881167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 35866862 - 35866705
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    ||||| ||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||  || |||||||||| ||| ||||| |||||||    
T  35866862 attttggagaataattttgtttcattttacttgtcactttcaagtttcaattcaacattaattattggtttatcaataatactcttacatatctattgta 35866763  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    |||||| ||  |||| ||| |||||||||||| ||||||||||||||||||| |||||    
T  35866762 gagagagaaataatagaataaaataataaatgtttaagggtattatagaaaaaacaca 35866705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 38296684 - 38296763
Alignment:
Q  220 agtaatactttaccttccccattcctaataaaatggaaataatagaataccaaagaaataaaaacaggccatcacagaga 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38296684 agtaatactttaccttccccattcctaataaaatggaaataatagaataccaaagaaataaaaacaggccatcacagaga 38296763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 26628845 - 26628997
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||  || |||||| ||||||||||||||||||||||||||||||  || |||||||||||||| | ||||||||||||    
T  26628845 ttttggagaataattttgtttcactttatttgtcattttcaagtttcaatgcaacattaattattgatttatcaataatacccttacctatttattgtag 26628944  T
Q  106 agagaaaacaaataaaatgaaataataaatgat---taagggtattatagaaa 155  Q
    ||||| ||  |||| ||||||||||||||| ||   |||||||||||||||||    
T  26628945 agagagaaataatagaatgaaataataaattatgggtaagggtattatagaaa 26628997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 27563896 - 27564002
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  27563896 ttttggagaacaattttgtttcatattacttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatacccttacctatttattgtag 27563995  T
Q  106 agagaaa 112  Q
    |||||||    
T  27563996 agagaaa 27564002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28568171 - 28568017
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||| |||||||||||   ||||||||||||| ||||||||||||||||||||||||||  || |||||| ||||||| | |||||||    
T  28568171 gtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggtttatcaatattacccttacctatttat 28568072  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    ||| |||||| ||  |||  |||||||||||||||||   ||||||||||||||||    
T  28568071 tgttgagagagaaataattgaatgaaataataaatga-gcagggtattatagaaaa 28568017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28575764 - 28575610
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||| |||||||||||   ||||||||||||| ||||||||||||||||||||||||||  || |||||| ||||||| | |||||||    
T  28575764 gtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgcaacattaattattggtttatcaatattacccttacctatttat 28575665  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    ||| |||||| ||  |||  |||||||||||||||||   ||||||||||||||||    
T  28575664 tgttgagagagaaataattgaatgaaataataaatga-gcagggtattatagaaaa 28575610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 28562673 - 28562519
Alignment:
Q  2 tccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttatt 101  Q
    ||||||||  ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||  || |||||| ||| ||| | ||||||||    
T  28562673 tccattttgaagaattattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaatattactcttacctatttatt 28562574  T
Q  102 gtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
     | |||||| ||  |||  |||||||| |||||||| ||||||||||||||||||    
T  28562573 tttgagagagaaataattgaatgaaatcataaatgagtaagggtattatagaaaa 28562519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 28326734 - 28326866
Alignment:
Q  53 aatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatag 152  Q
    ||||||||| |||||||||  ||||||||||||  ||||||| |||||||| |||||| ||  |||| |||||||||||||||  ||||| ||||||| |    
T  28326734 aatgcaacactaattattggtttgtcaataataatcttgcatgtttattgtggagagagaaataatagaatgaaataataaatagttaagagtattattg 28326833  T
Q  153 aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| ||||||| |||||||||||||||||||||    
T  28326834 aaaa-acacataatttcatcaaaaataacaaaat 28326866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 10180897 - 10180981
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataataccctt 90  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    |||||||||||||||||    
T  10180897 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcaatgcaacattagttatgaatttgtcaataataccctt 10180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 45400799 - 45400927
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||  || |||||||||| || ||||||||||||||||||||||   || |||||||||  ||| | ||||||||||||    
T  45400799 ttttggagaataattttgtttcactttatttgtcacttttaaatttcaatgcaacattaattattaatttatcaataatattcttacttatttattgtag 45400898  T
Q  106 aga--gaaaacaaataaaatgaaataata 132  Q
    |||  || || ||||| ||||||||||||    
T  45400899 agagggagaaaaaatataatgaaataata 45400927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 39151607 - 39151473
Alignment:
Q  49 tttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtatt 148  Q
    |||||| |||||||||||||||  ||||||||| |||| ||| | ||||||||||| |||||||   |||| ||| |||||||||||||| ||   ||||    
T  39151607 tttcaaggcaacattaattattagcttgtcaatgatactcttacctatttattgtaaagagaaa--taatagaataaaataataaatgataaattatatt 39151510  T
Q  149 atag-aaaacacacatattttcatcaaaaataacaaa 184  Q
    |||| |||| | ||||| |||||||||||||||||||    
T  39151509 atagaaaaaaatacataatttcatcaaaaataacaaa 39151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 30906724 - 30906902
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||||||| ||| ||| ||||||| ||||| || ||| ||||||| |||||||||||  |||| ||||||| |||| | ||||| |||||| | ||     
T  30906724 agaataattttattttacattacttgttacttttaaattttaatgcaatattaattattgaattgttaataatatccttacttatttgttgtagtgtgag 30906823  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatag----aaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||  |||| ||| |||||||||||| |||||| | | ||||    ||||| |||| | |||||| ||||||||||||||    
T  30906824 aaataatagaattaaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaat 30906902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 37510519 - 37510363
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||| |||||||||||||||||   ||||| ||||||| ||||||||||| || ||||||| ||   |||||||| |||  |||   |||||||||||    
T  37510519 attttaaagaataattttgtttcattttacttatcacttttaagtttcaatgtaaaattaattcttaatttgtcaattatattcttatctatttattgta 37510420  T
Q  105 ga--gagaaaaca---aataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
     |  ||||||  |   |||||||||||||| |||||||||||||||||||| |||||    
T  37510419 aaaggagaaatgataaaataaaatgaaatattaaatgattaagggtattattgaaaa 37510363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 3720719 - 3720836
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| ||| ||   |||||||||| ||||||| ||||| || |||||||||| ||||    
T  3720719 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattactctaagatatttattgcagagagagaaacatatgaaatgaaatattaaa 3720818  T
Q  135 tgattaagggtattatag 152  Q
    | | ||||| ||||||||    
T  3720819 ttaataaggctattatag 3720836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 11163305 - 11163422
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| |  || ||||||||  ||||||||||||||||| ||  |||| |||||| ||| ||||    
T  11163305 tgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttgattatttattgtagagagagaagtaaatgaaatgagatattaaa 11163404  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  11163405 tgatgaaggttattatag 11163422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 12248971 - 12248854
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    |||||||||| |  |||||||||| ||||| | |||| ||  ||||| || |||||| |||||||||| |||| | ||| | ||||||||||||| ||||    
T  12248971 tgtcactttcgaagttcaatgcaatattaaatgttgttttaccaatattatccttgcttatttattgtggagaaagaaatatataaaatgaaatattaaa 12248872  T
Q  135 tgattaagggtattatag 152  Q
    ||| ||||| ||||||||    
T  12248871 tgaataaggttattatag 12248854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 45278717 - 45278757
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  45278717 tctccaaaatggacatgtattttgaaacggagggagtaata 45278757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 27035034 - 27034995
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaat 225  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  27035034 tctccaaaatggacatgtattttgaaacggagggagtaat 27034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 36068116 - 36068078
Alignment:
Q  187 ctccaaaatggacatgtattttaaaacggaaggagtaat 225  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  36068116 ctccaaaatggacatgtattttgaaacggagggagtaat 36068078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 43275637 - 43275675
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaa 224  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  43275637 tctccaaaatggacatgtattttgaaacggagggagtaa 43275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 167678 - 167561
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| || ||||   |||||||||| |||||| ||| | ||||||||| ||| ||||    
T  167678 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttagttatttattgtggagagataaatatataaaatgagatattaaa 167579  T
Q  135 tgattaagggtattatag 152  Q
    | | ||||| ||||||||    
T  167578 ttaataaggttattatag 167561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 3585488 - 3585451
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  3585488 tctccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 7146946 - 7146913
Alignment:
Q  190 caaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||| ||||||||||||||    
T  7146946 caaaatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 8697914 - 8697951
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  8697914 tctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 40918969 - 40919006
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  40918969 tctccaaaatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 41307977 - 41308014
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  41307977 tctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 43553078 - 43553195
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  ||||||||||| ||||   |||| || |||||| |||||||   |||||||||  |||||| ||| | || |||||||||| ||||    
T  43553078 tgtcactttcaaagttcaatgcaactttaaacgttgttttatcaatattacccttagttatttattgcggagagagaaatatatgaaatgaaatattaaa 43553177  T
Q  135 tgattaagggtattatag 152  Q
    ||| ||||| ||||||||    
T  43553178 tgaataaggatattatag 43553195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 36881533 - 36881347
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881533 gtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 36881434  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881433 tgtagagagagaaaaaaataaaatgaaataataaataattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 36881347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 46694134 - 46694322
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46694134 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 46694233  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  46694234 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 46694322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 13365096 - 13364908
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13365096 gtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 13364997  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  13364996 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 13364908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 3383329 - 3383141
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3383329 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatactcttgcatatttat 3383230  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  3383229 tgtagagagagaaaaaaataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 3383141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 23087959 - 23088143
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23087959 attttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 23088058  T
Q  105 gagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  23088059 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 23088143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 199108 - 198920
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  199108 gtccattttagaaaataattttgtttcacaatatttgtcattttcaagtttcaatgcaacattaattattgttttgtcaataatacccttgcatatttat 199009  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  199008 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaat 198920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 19241692 - 19241880
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  19241692 gtccattttagagaataattttgtttcaaaatacttgtcacttttaagtttcaatgcaacattaattattgacttgtcaataatacccttgcatgtttat 19241791  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19241792 tgtagagagagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaat 19241880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 29375385 - 29375203
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29375385 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatgcccttgcatatttat 29375286  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||| ||||     |||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  29375285 tgtagagaaaaaa-----aaaaagaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaat 29375203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 43750389 - 43750202
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43750389 gtccattttttagaataatttggtttctcaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatactcttgcatatttat 43750290  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    ||| |||||| || ||||| |||||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  43750289 tgttgagagagaaaaaatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaat 43750202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18355892 - 18356053
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| | |||||||    
T  18355892 gtccattttgaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattgatttatcaataatacccttacttatttat 18355991  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    |||||||||| ||  |||| |||||||| |||||||| |||||||||||||||||| |||||    
T  18355992 tgtagagagagaaataatagaatgaaatgataaatgagtaagggtattatagaaaaaacaca 18356053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 13703454 - 13703338
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  13703454 agaataaatttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttgtcaataatacccttgcatatttattgcagagagaa 13703355  T
Q  112 aacaaataaaatgaaataa 130  Q
    |  ||||| ||||||||||    
T  13703354 a--aaatagaatgaaataa 13703338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 155
Target Start/End: Complemental strand, 48436472 - 48436325
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||   ||||||||||||    
T  48436472 ttttggagaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattagcttgtcaataatacacttaattatttattgtag 48436373  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa 155  Q
    |||||||   |||| |||||||||||||||  ||||| ||||||||||||    
T  48436372 agagaaa--taatataatgaaataataaattgttaagtgtattatagaaa 48436325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31873887 - 31874015
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  31873887 gtccattttagagaataattttatttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaa-aatacccttatatatttat 31873985  T
Q  101 tgtagagagaaaacaaataaaatgaaataa 130  Q
    || |||||||  | ||||| ||||||||||    
T  31873986 tgcagagagagtaaaaatagaatgaaataa 31874015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 27707026 - 27707172
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag--agagaa 111  Q
    ||||||||| |||||||||| || |||||||||| ||| |||| |||||||| |||||||||||||||||||||| | ||||||||||||||  ||||||    
T  27707026 aataattttatttcacaatatttatcactttcaaattttaatgtaacattaactattgtcttgtcaataataccc-tacatatttattgtagtaagagaa 27707124  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatagaaaacaca 160  Q
    || |||||||| ||||||||||||| |||||| ||||||||||||||||    
T  27707125 aa-aaataaaaagaaataataaatggttaaggatattatagaaaacaca 27707172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54086805 - 54086651
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| ||||||| ||||||||||   || ||||||||||||||||||||| |||||||||||||||  || |||||||||||||| | ||| |||    
T  54086805 gtccattttggagaatacttttgtttcattttatttgtcactttcaagtttcaatacaacattaattattgatttatcaataatacccttacctatgtat 54086706  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    | |||||||||||  |||| ||||||||||| ||||| ||||||||||||||||||    
T  54086705 tatagagagaaaaataatagaatgaaataat-aatgagtaagggtattatagaaaa 54086651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 48963368 - 48963223
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||||||||||||||| ||||| |||| || ||| ||| |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  48963368 attttagagaataattttatttcataatatttatcatttttaagtttcaatgcaacattaattattgtcttgtcaataatatccttatatatttattgta 48963269  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattata 151  Q
     |||| | | ||||| |||||||||||||||| |||||  |||||||    
T  48963268 aagag-agataaatagaatgaaataataaatggttaagattattata 48963223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48820593 - 48820508
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 86  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48820593 gtccattttaaaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaataatac 48820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 52009105 - 52009229
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | || | ||||||||||||||||| ||  |||| ||| |||||||    
T  52009105 tacttgtcactttcaagtttcgatgcaacattaattattgtcttgtcaataataacattacctatttattgtagagagataaataatagaataaaataat 52009204  T
Q  132 aaatgattaagggtattatagaaaa 156  Q
    ||||  ||||| |||||||||||||    
T  52009205 aaatagttaagtgtattatagaaaa 52009229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6901814 - 6901655
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||  || ||||||||| ||||  |  |||||    
T  6901814 gtccattttggagaataattttgtttcactttacttgtcacttttaagtttcaatgcaacattaatcattgatttatcaataatatcctt--aactttat 6901717  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    ||| |||||| ||  || | ||||||||||||||||| ||||||||||| |||||| |||||    
T  6901716 tgttgagagagaaataacagaatgaaataataaatgagtaagggtattagagaaaaaacaca 6901655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32835013 - 32835131
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||| ||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||  ||||| ||    
T  32835013 gtccattgtagagaataatttcgtttcatagtacttgtcattttcaagtttcaatgcaacattaagtattgttttgtcaataatacccttaaatattaat 32835112  T
Q  101 tgtagagagaaaacaaata 119  Q
    |||||||||| || |||||    
T  32835113 tgtagagagagaaaaaata 32835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 24064468 - 24064315
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||| ||||||  ||| |||||||||||||||| |||| ||||||||||||||  || |||||||||   || | ||||||||||||    
T  24064468 ttttggagaataattttatttcactttacatgtcactttcaagttttaatgtaacattaattattggtttatcaataata---ttacctatttattgtag 24064372  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    ||||| ||  |||| ||| ||||||||||||  |||||||||||||||||| |||||    
T  24064371 agagagaaataatagaataaaataataaatgggtaagggtattatagaaaaaacaca 24064315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 37781152 - 37781002
Alignment:
Q  38 tcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatga 137  Q
    |||||||||| ||||||| |||  ||||||||||  |||||||||||||||||  |||||||||||||||| | ||  | || ||||||||||||||||     
T  37781152 tcactttcaaatttcaatccaaagttaattattggtttgtcaataatacccttaaatatttattgtagagaaagaaatactagaatgaaataataaatgg 37781053  T
Q  138 ttaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||||  |||||||||  |||||||||| | ||||||||||||||| |||||    
T  37781052 ttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaat 37781002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 53559648 - 53559819
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    |||||||||||||||   ||||||||||| ||||||||||||||||||||||| ||||  || | ||||||||  || | ||||||||||||||| | ||    
T  53559648 aataattttgtttcaatttacttgtcactctcaagtttcaatgcaacattaatcattgatttattaataatactgttacttatttattgtagagaaataa 53559747  T
Q  114 caaataaaatgaaataataaatgattaagggtat--tatagaaaacacacatattttcatcaaaaataacaa 183  Q
      ||||||||||||||||||| |  ||||| |||  || | |||||||| | | ||||||||||||||||||    
T  53559748 ataataaaatgaaataataaacgggtaaggatatcgtaaataaaacacagagaatttcatcaaaaataacaa 53559819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 46188967 - 46188863
Alignment:
Q  53 aatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat-aaatgattaagggtattata 151  Q
    |||| ||||||||||||||  ||||||||||||  ||||| ||||||||||||||||| ||  |||| ||||||||||| |||| |||||||||||||||    
T  46188967 aatgtaacattaattattggtttgtcaataatattcttgcttatttattgtagagagagaaataatataatgaaataataaaatcattaagggtattata 46188868  T
Q  152 gaaaa 156  Q
    |||||    
T  46188867 gaaaa 46188863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 1455186 - 1455360
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||| ||||||| ||  |||||||||||||| | |||||||||||||||||||||||  |||||||||| | |||| | ||| ||  |||||| |||    
T  1455186 agaataaatttgttttactttacttgtcactttccaatttcaatgcaacattaattattggtttgtcaataacatccttacctatctaccgtagagggaa 1455285  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattataga--aaacacacatattttcatcaaaaataacaaaat 186  Q
    |    ||| ||| |||||||||||| | ||| | ||||||||  ||||||| ||| ||| |||||||||||||||||    
T  1455286 a--ttatataattaaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaat 1455360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 19896994 - 19897139
Alignment:
Q  41 ctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgatta 140  Q
    ||||||||||| ||| |||||||||||||||  || ||||||||| ||||   |||||||| || | |||||   |||| |||||||||||||| || ||    
T  19896994 ctttcaagttttaatacaacattaattattggtttatcaataatatccttatctatttattataaaaagaaat--aatagaatgaaataataaaagagta 19897091  T
Q  141 agggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||  |||||||| | | |||||| ||||||||||||||    
T  19897092 agggtattatagaaaaaacacaaagaatttcataaaaaataacaaaat 19897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 26783718 - 26783661
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacat 62  Q
    |||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  26783718 attttaaagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacat 26783661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 52805082 - 52805238
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat 131  Q
    ||||||||||||||||||||| |||||||||| |||||||  || ||||||| |||||| | |||| |||||||  ||  ||  |||| ||| |||||||    
T  52805082 tacttgtcactttcaagtttcgatgcaacatttattattgatttatcaataacacccttacttattaattgtaggcagggaaataatataataaaataat 52805181  T
Q  132 aaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    |||||  |||| ||||||||||||| |  || | | ||||||||||||| |||||||    
T  52805182 aaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaat 52805238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 37293644 - 37293555
Alignment:
Q  18 attttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga 110  Q
    |||||||||||   |||||||| |||||||||||||||||||||||||||  |   || |||||| ||||||| | |||||||||||||||||    
T  37293644 attttgtttcattttacttgtccctttcaagtttcaatgcaacattaattgat---ttatcaatattacccttacctatttattgtagagaga 37293555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 23771326 - 23771447
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| |||||| ||  |  || ||||||||  ||||||||||||||||| ||| | || |||| | ||| ||||    
T  23771326 tgtcactttcaaagttcaatgcaacattaaatattgttttacctttattacccttgattatttattgtagagagagaaatacatgaaataagatattaaa 23771425  T
Q  135 tgattaagggtattatagaaaa 156  Q
    |||| |||| ||||||||||||    
T  23771426 tgatgaaggttattatagaaaa 23771447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 40228280 - 40228361
Alignment:
Q  53 aatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatg 136  Q
    ||||||||||||||||||| ||||| ||||| || ||| | |||||||||||||||||||   |||| || |||||||||||||    
T  40228280 aatgcaacattaattattggcttgttaataaaactcttacttatttattgtagagagaaa--taatataacgaaataataaatg 40228361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 43159967 - 43159867
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagag-aaaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||  || |||||| |||||||  |||||||||| |||||| |||||| ||||||| ||||| ||||    
T  43159967 tgtcactttcaaaattcaatgcaacattaaatgttgatttatcaatattacccttaaatatttattgcagagagaaaaacatataaaataaaatattaaa 43159868  T
Q  135 t 135  Q
    |    
T  43159867 t 43159867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 198892 - 198852
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  198892 tctccaaaatggacatgtattttgaaacggagggagtaata 198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 38805282 - 38805238
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaatacttt 230  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||    
T  38805282 tctctaaaatggacatgtattttaaaacggagggagtagtacttt 38805238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 52173786 - 52173885
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagag-aaaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||| ||| | |||| ||  ||||| |||| ||| |||||||||| |||||| |||||| || |||||||||| ||||    
T  52173786 tgtcactttcaaagttcaatgcaacaataaatgttgttttaccaatattacctttgaatatttattgcagagagaaaaacatatgaaatgaaatattaaa 52173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 32980679 - 32980753
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga 110  Q
    ||||||||||||  |||||| ||||||||| || ||| || |||||| |||||||   |||||||||||||||||    
T  32980679 tgtcactttcaaaattcaatacaacattaaataatgttttatcaatattacccttagttatttattgtagagaga 32980753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 36881319 - 36881281
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaa 224  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  36881319 tctccaaaatggacatgtattttgaaacggagggagtaa 36881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 3383113 - 3383076
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  3383113 tctccaaaatggacatatattttgaaacggaaggagta 3383076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 3643402 - 3643286
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  ||||||||||| |||| | |||| || |||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| ||||    
T  3643402 tgtcactttcaaagttcaatgcaac-ttaaatgttgttttatcaatattacccttagatatttattgcggagagagaaacatatgaaatgaaatattaaa 3643304  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  3643303 ttaataaggtcattatag 3643286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 12094619 - 12094582
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  12094619 tctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 13702890 - 13702834
Alignment:
Q  132 aaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    ||||| |||| |||||||||||||||| ||||||  |||||||||||||| ||||||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaat 13702834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 29375175 - 29375138
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  29375175 tctccaaaatggacatgtattttgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 33874753 - 33874636
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| || ||| ||  ||||| |||||||  ||||||||||  |||||| ||||  || |||||||||| ||||    
T  33874753 tgtcactttcaaagttcaatgcaacattaaatagtgttttaccaatattacccttagatatttattgcggagagagaaacgtatgaaatgaaatattaaa 33874654  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  33874653 ttaataaggccattatag 33874636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 44522567 - 44522506
Alignment:
Q  125 aaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||||| ||||  ||||||||||||| ||||||  |||||| |||||||| |||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacacatgatttcataaaaaataataaaat 44522506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 48152024 - 48152141
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| |||||||   |||||||||| || ||| ||| | ||||||||| |||  |||    
T  48152024 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagttatttattgttgaaagagaaatatataaaatgagatatcaaa 48152123  T
Q  135 tgattaagggtattatag 152  Q
    ||| ||||| ||||||||    
T  48152124 tgaataaggttattatag 48152141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 26105179 - 26105136
Alignment:
Q  104 agagagaaaacaaataaaatgaaataataaatgattaagggtatt 148  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||    
T  26105179 agagagaaaa-aaatataatgaaataataaatggttaagggtatt 26105136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 46694350 - 46694390
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    ||||||||| ||||||||||||| ||||||| |||||||||    
T  46694350 tctccaaaaaggacatgtattttgaaacggagggagtaata 46694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 51584490 - 51584442
Alignment:
Q  34 cttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaata 82  Q
    |||||||  ||||| |||||||| ||||||||||||||| |||||||||    
T  51584490 cttgtcatattcaaatttcaatgtaacattaattattgttttgtcaata 51584442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 55141678 - 55141566
Alignment:
Q  41 ctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaatgatt 139  Q
    |||||||  |||||||||||||||| | |||| ||  ||||| |||||||   |||||||||| || ||| ||| | ||||||||| ||| ||||||| |    
T  55141678 ctttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagttatttattgttgaaagataaatatataaaatgagatattaaatgaat 55141579  T
Q  140 aagggtattatag 152  Q
    |||| ||||||||    
T  55141578 aaggttattatag 55141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 8e-89; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 4 - 186
Target Start/End: Complemental strand, 47110700 - 47110516
Alignment:
Q  4 cattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47110700 cattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 47110601  T
Q  104 aga--gagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||  ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47110600 agagagagaaaaaaaataaaataaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 47110516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 25614377 - 25614563
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25614377 gtccattttagagaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 25614476  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  25614477 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtatttcagaaaacacacatattttcatcaaaaataacaaaat 25614563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 10981761 - 10981573
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981761 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 10981662  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| | | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  10981661 tgtagagagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 10981573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 27814064 - 27813876
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27814064 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtgttgtcaataatacccttgcatatttat 27813965  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  27813964 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaat 27813876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 36453148 - 36453336
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453148 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 36453247  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  36453248 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaat 36453336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 40349214 - 40349025
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  40349214 gtccattttagagaataattt-gtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtttggtcaataatacccttgcatatttat 40349116  T
Q  101 tgtagagaga---aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||   | | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40349115 tgtagagagagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 40349025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 16662335 - 16662161
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||| | ||||||||||||| |||     
T  16662335 agaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttgtcattaatacccttacctatttattgtagatagag 16662236  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||  |||| ||| |||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  16662235 aaagaatataataaaataataaatggttaagggtattataaaaaaaacacaaattttcatcaaaaataacaaaat 16662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 17636695 - 17636521
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||| | ||||||||||||| |||     
T  17636695 agaataattttgttttaaattacttgtcactttcaagtttcaatgcaacattaattattgatttgtcattaatacccttacctatttattgtagatagag 17636596  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||  |||| ||| |||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  17636595 aaagaatataataaaataataaatggttaagggtattataaaaaaaacacaaattttcatcaaaaataacaaaat 17636521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 3091755 - 3091582
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||||||||||||||  ||||||||| ||| |||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||    
T  3091755 agaataattttgtttcactttacttgtcatttttaagtttcaatgcaacattaaatattggtttgtcaataatacccttacatatttattgtagagagaa 3091656  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
       | ||| |||||||||||||||| |||||||||||||||  |||||||| | | |||||||||||||||||||||    
T  3091655 ---atatagaatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaat 3091582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 27941013 - 27941119
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  27941013 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcattgcaacattaattattggcttgtcaataatacccttacttatttattgtag 27941112  T
Q  106 agagaaa 112  Q
    | |||||    
T  27941113 aaagaaa 27941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 16360624 - 16360449
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||||||||| | |||||  |||||||||||||||||||||||| ||||||||| |||||  ||||||||| |   |||  |||||| ||||||    
T  16360624 ttttggagaataattt-gcttcactttacttgtcactttcaagtttcaatacaacattaaatattggtttgtcaatact---cttttatattttttgtag 16360529  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
     |||| ||  |||| || ||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  16360528 ggagagaaataatagaa-gaaataataaatggttaagggtattatagaaaaaacacagaatttcatcaaaaataacaaaat 16360449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 7743433 - 7743608
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||||||| ||||||  || |||||| ||| ||||||||||||||  ||||||||||  || ||| |||||| |    ||||||||||||||||||     
T  7743433 agaataattttatttcactttatttgtcatttttaagtttcaatgcaatgttaattattggattctcagtaatactcagatatatttattgtagagagat 7743532  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatagaaa-acacacatattttcatcaaaaataacaaaat 186  Q
    ||  |||  ||||||||||||||| ||||| ||||||||||||| | ||||||| |||||||||||||||||||||    
T  7743533 aaataattgaatgaaataataaataattaacggtattatagaaagaaacacataatttcatcaaaaataacaaaat 7743608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 3498813 - 3498966
Alignment:
Q  35 ttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaa 134  Q
    ||||||| ||||| ||||||||||| |||||||||||  || || ||||||| ||| |||||||||| || ||||| || ||||||||||||||||||||    
T  3498813 ttgtcacattcaactttcaatgcaaaattaattattgatttatcgataatactcttacatatttattttaaagagagaaaaaataaaatgaaataataaa 3498912  T
Q  135 tgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    || ||||  ||||||||||||| | ||| |   |||||| ||||||||||||||    
T  3498913 tggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaat 3498966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 24456800 - 24456898
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga 110  Q
    ||||||||||||||| ||  ||||||||||| |||||||||||||||||||||| || |   || |||||||||||||||| ||| |||||||||||||    
T  24456800 agaataattttgtttaactttacttgtcactctcaagtttcaatgcaacattaactactaatttatcaataatacccttgcctatgtattgtagagaga 24456898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 8380157 - 8380040
Alignment:
Q  35 ttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaa 134  Q
    |||||||||| |||||||||| |||||||| ||||||  |||| || ||||||||| | ||||||||||||||||||||  |||| ||| | ||    ||    
T  8380157 ttgtcacttttaagtttcaatacaacattagttattggtttgttaaaaatacccttacttatttattgtagagagaaaaataatagaataatat----aa 8380062  T
Q  135 tgattaagggtattatagaaaa 156  Q
    |||||| |||||||||||||||    
T  8380061 tgattaggggtattatagaaaa 8380040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 27021699 - 27021566
Alignment:
Q  53 aatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa-aacaaataaaatgaaataataaatgattaagggtattata 151  Q
    |||||||||||||||||||  |||| |||||||| |||   |||||||||   |||||| || | || ||||   ||||||||| ||||||| |||||||    
T  27021699 aatgcaacattaattattgatttgtaaataatacacttcactatttattgctaagagaacaatagatgaaattggataataaataattaaggttattata 27021600  T
Q  152 gaaaacacacatattttcatcaaaaataacaaaa 185  Q
    ||||| | ||||| ||||||||||| ||||||||    
T  27021599 gaaaaaagacatagtttcatcaaaagtaacaaaa 27021566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 25614591 - 25614630
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaat 225  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25614591 tctccaaaatggacatgtattttgaaacggaaggagtaat 25614630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 27942173 - 27942251
Alignment:
Q  110 aaaacaaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| ||||| |||||||||||||||| |||| ||||||||||  |||||||||||| | |||| |||||||| |||||    
T  27942173 aaaaaaaatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaat 27942251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 33257922 - 33258037
Alignment:
Q  38 tcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaatg 136  Q
    ||||||||||  |||||||||||||||| | |||| ||  ||||| ||||||||  |||||||| | |||||| ||| | ||||||||| ||| ||||||    
T  33257922 tcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttggttatttattatggagagagaaatatataaaatgagatattaaatg 33258021  T
Q  137 attaagggtattatag 152  Q
    | ||||| ||||||||    
T  33258022 aataaggttattatag 33258037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 40348997 - 40348960
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40348997 tctccaaaatggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 46563327 - 46563210
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||| | ||||||||| |||||| ||| || || ||||||||  ||||||||||||||||| ||| | || |||||| ||| ||||    
T  46563327 tgtcactttcaaagttcagtacaacattaaatattgttttgacattattacccttgattatttattgtagagagagaaatatatgaaatgagatattaaa 46563228  T
Q  135 tgattaagggtattatag 152  Q
    |||  |||| ||||||||    
T  46563227 tgaggaaggttattatag 46563210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 31815268 - 31815172
Alignment:
Q  40 actttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaat 135  Q
    ||||||||  |||||||||||||||| |||||| ||  ||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| |||||    
T  31815268 actttcaaaattcaatgcaacattaaatattgttttaccaatattacccttagatatttattgcggagagagaaacatatgaaatgaaatattaaat 31815172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 24283621 - 24283719
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaat 135  Q
    ||||||||||||  |||||||||||||||| |  ||| || |||||| |||||||  ||||||||||  ||||| ||||| ||||| ||||||| |||||    
T  24283621 tgtcactttcaaagttcaatgcaacattaaatgatgttttatcaatattacccttagatatttattgcggagag-aaacatataaattgaaatattaaat 24283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 35112438 - 35112545
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||| ||||||||||||   ||  ||||||||||||  |||| ||||||||||| |||||| ||  ||||| |||||||   |||||||||| |    
T  35112438 ttttggagaaaaattttgtttcaatttaactgtcactttcaaagttcattgcaacattaaatattgttttaccaatattacccttagttatttattgtgg 35112537  T
Q  106 agagaaaa 113  Q
    ||||||||    
T  35112538 agagaaaa 35112545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 37983289 - 37983221
Alignment:
Q  116 aataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| |||||||||||||||| |||| ||||||||  |||| ||| | | |||||||||||||||||||||    
T  37983289 aatataatgaaataataaatggttaaaggtattat--aaaaaacataaaatttcatcaaaaataacaaaat 37983221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 43002396 - 43002341
Alignment:
Q  223 aatactttaccttccccattcctaataaaatgg-aaataatagaataccaaagaaa 277  Q
    |||||| ||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  43002396 aatactctaccttccccattccaaataaaatggctactaatagaataccaaagaaa 43002341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 6737294 - 6737252
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataatacccttgc 92  Q
    |||||||||| |||||||||||| || ||||||||||||||||    
T  6737294 ttcaatgcaatattaattattgttttatcaataatacccttgc 6737252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 8966104 - 8965987
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  ||||||||||||||||  ||||| ||  |  || ||||||||  ||||||||||||||||| ||| | || |||| | ||| ||||    
T  8966104 tgtcactttcaaagttcaatgcaacattaaacattgttttacctttattacccttgattatttattgtagagagagaaatacatgaaataagatattaaa 8966005  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  8966004 tgatgaaggttattatag 8965987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 10981545 - 10981508
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  10981545 tctccaaaatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 25060149 - 25060186
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  25060149 tctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 27813848 - 27813811
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  27813848 tctccaaaatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 28200335 - 28200298
Alignment:
Q  125 aaataataaatgattaagggtattatagaaaacacaca 162  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28200335 aaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 41480679 - 41480639
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataataccctt 90  Q
    |||||||||| ||||| |||||| |||||||||||||||||    
T  41480679 ttcaatgcaatattaactattgttttgtcaataataccctt 41480639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 42842070 - 42841970
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  ||||||||| |||||| | || | || |||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| ||||    
T  42842070 tgtcactttcaaagttcaatgcatcattaaatgttattttatcaatattacccttagatatttattgcggagagagaaacatatgaaatgaaatattaaa 42841971  T
Q  135 t 135  Q
    |    
T  42841970 t 42841970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 8e-89; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 40886634 - 40886822
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40886634 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 40886733  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40886734 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaat 40886822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 12806877 - 12807065
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12806877 gtccattttagagaataattttgtttcacaatacttgtctctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 12806976  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12806977 tgtagagagaggaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 12807065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30720516 - 30720704
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30720516 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattagttattgtcttgtcaataatacccttgcatatttat 30720615  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  30720616 tgtagagagagaaaaaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaat 30720704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 36561123 - 36561311
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36561123 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaagtattgtcttgtcaataatacccttgcatatttat 36561222  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  36561223 tgtagagagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaat 36561311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 10285086 - 10285269
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10285086 attttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataata-ccttgcatatttattgta 10285184  T
Q  105 gagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  10285185 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 10285269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 25773902 - 25773714
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25773902 gtccattttagagaataagtttgtttcacaatacttatcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 25773803  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||| | | | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25773802 tgtagagatagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 25773714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 37900658 - 37900836
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagaga--g 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |    
T  37900658 agaataattttgtttcacgatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgcagagagtg 37900757  T
Q  110 aaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  37900758 aaaaaaaatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaat 37900836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 25683253 - 25683440
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  25683253 gtccattttggagaataattttgtttcataaaacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaataatacccttacatatttat 25683352  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||| ||| |||||||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  25683353 tgtagagagagaaaaaatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaat 25683440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 12 - 177
Target Start/End: Complemental strand, 16983499 - 16983334
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  16983499 agaataattttgtttcacaatacttgtcacttttaagtttcaatgcaacattaattattgtcttttcaataatacccttgcatatctattgcagagagaa 16983400  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaa 177  Q
    || ||  ||||| ||||||| |||| ||||||||||| ||||||| ||||||||  ||||||||||||    
T  16983399 aa-aataaaaataaaataat-aatggttaagggtattgtagaaaaaacacatatcatttcatcaaaaa 16983334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23097748 - 23097880
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  23097748 gtccattttggagaataattttgtttcacaatacttgttactttcatgtttcaatgcaatattaattattgtcttgtcaataatacccttacatatttat 23097847  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaa 134  Q
    ||||||||||||| ||||| ||| ||||||||||    
T  23097848 tgtagagagaaaa-aaatagaataaaataataaa 23097880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 734363 - 734549
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||  || |||||||||| ||| | ||| |||    
T  734363 gtccattttggagaataattttgtttcactttacttgtcactttcaagtttcaatacaacattaattattggtttatcaataatactcttacctatatat 734462  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatag-aaaacacacatattttcatcaaaaataacaaaat 186  Q
    | |||||||||||  |||| ||||||||||||||||| |||||||||||||| |||||||| | | ||||||||| ||| |||||||    
T  734463 tatagagagaaaaataatagaatgaaataataaatgagtaagggtattatagaaaaacacaaagaatttcatcaataatgacaaaat 734549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 39071131 - 39070974
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    ||||| |||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||||  || |||||||| | ||| | |||||||||||    
T  39071131 atttttgagaataattttgtttcactttacttgtcacttttaagtatcaatgcaacattaattattggtttatcaataatccacttacctatttattgta 39071032  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    |||||| ||  |||| ||||||||||||||||| |||||||||||||||||| |||||    
T  39071031 gagagagaaataatagaatgaaataataaatgagtaagggtattatagaaaaaacaca 39070974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 16054359 - 16054179
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||||||||||| |||||  |  ||||||||||||||||||||||||||||||||||||   |||||||||||||||||   ||||||||||||    
T  16054359 ttttggagaataattttggttcactttggttgtcactttcaagtttcaatgcaacattaattattagtttgtcaataatacccttatctatttattgtag 16054260  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||||| ||  |||| ||| |||||||||||| | |||| |||||||||||| ||||| | |||||| ||||||||||||||    
T  16054259 agagagaaataatagaataaaataataaatggtcaaggatattatagaaaaaacacaaaatttcataaaaaataacaaaat 16054179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 7277486 - 7277634
Alignment:
Q  40 actttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgatt 139  Q
    ||||| || ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||| ||| || ||||| |||||||||||||||| ||    
T  7277486 acttttaaatttcaatgcaaaattaattattgtcttgtcaataatgcccttacttatttattgtagatagagaaaaaatataatgaaataataaatggtt 7277585  T
Q  140 aagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    || |||||||||||||  ||||||||| ||| |||||||||||||||||    
T  7277586 aaaggtattatagaaaacacacacataatttgatcaaaaataacaaaat 7277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 30402991 - 30403174
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    ||||||||||||||||| |||||   ||||||||||||| |||||||||| ||| |||||||||||  |||||||||||||||||    |||||||| ||    
T  30402991 ttttagagaataattttatttcattttacttgtcacttttaagtttcaatacaaaattaattattggtttgtcaataatacccttatccatttattgaag 30403090  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatag---aaaacacacatattttcatcaaaaataacaaaat 186  Q
    | ||||||  ||||||||||||||| ||||||||||| |||||||||   |||| ||||| | |||||||||||||||||||||    
T  30403091 aaagaaaaataataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaat 30403174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 11319805 - 11319656
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||||||||||||||||||||||  || || ||||||||| |||| ||||||| |||||||||||  || | |||||||| ||| | |||||||||||    
T  11319805 attttagagaataattttgtttcactttatttatcactttcaggttttaatgcaatattaattattggtttattaataatactcttacctatttattgta 11319706  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    ||||||||   |||| ||||||||||||||||| ||||||||||||||||||    
T  11319705 gagagaaa--taatagaatgaaataataaatgagtaagggtattatagaaaa 11319656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 1056684 - 1056758
Alignment:
Q  38 tcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaa 112  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||| |||   |||||||||||||||||||    
T  1056684 tcactttcaagtttcaatgcaacattaattattagtttgtcaataatactcttatttatttattgtagagagaaa 1056758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 11795314 - 11795392
Alignment:
Q  8 ttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 86  Q
    ||||||||||||||||||||||  || || |||||||||||||||||||||||||||||||| |  || ||||||||||    
T  11795314 ttagagaataattttgtttcactttatttatcactttcaagtttcaatgcaacattaattataggtttatcaataatac 11795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 26168156 - 26168075
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacc 87  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||| |||   |||| |||||||||    
T  26168156 ttttagagaataattttgtttcactttaattgtcactttcaagtttcaatgcaagattaatgatttgtttgttaataatacc 26168075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 11797768 - 11797694
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtaga 106  Q
    ||||||||| |||||| ||||||| ||||||||||||||   |||||||| |||||||||| |||||||||||||    
T  11797768 tacttgtcattttcaaatttcaatacaacattaattattagtttgtcaatgatacccttgcttatttattgtaga 11797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 1056402 - 1056493
Alignment:
Q  94 tatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatag-aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||||||||||||   |||| |||||||||||||||||| ||  ||||||||| |||||||| | | |||||| ||||||||||||||    
T  1056402 tatttattgtagagagaaat--aatataatgaaataataaatgatcaatagtattatagaaaaacacaaagaatttcattaaaaataacaaaat 1056493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 15629376 - 15629239
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt--agagagaa 111  Q
    ||||||||||||||||  ||||||| | ||| || |||||||||| |||||||||||   || ||||  |||  ||| | ||||||||||  ||||||||    
T  15629376 aataattttgtttcactttacttgttatttttaaatttcaatgcagcattaattattaatttatcaacgatatacttacctatttattgtagagagagaa 15629277  T
Q  112 aacaaataaaatgaaataataaatgattaagggtatta 149  Q
    ||  |||| ||||||||| ||||||||||||| |||||    
T  15629276 aaataatataatgaaatagtaaatgattaaggatatta 15629239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 23098386 - 23098446
Alignment:
Q  128 taataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    ||||||||| ||||||||||||||| |||||  |||||| |||||||||||||||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaat 23098446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 12305728 - 12305687
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataatacccttg 91  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  12305728 ttcaatgcaacattgattattgttttgtcaataatacccttg 12305687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 18393169 - 18393052
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| |  || ||||||||  ||||||||||||||||| ||  |||| |||||| ||| ||||    
T  18393169 tgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttgattatttattgtagagagagaagtaaatgaaatgagatattaaa 18393070  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  18393069 tgatgaaggttattatag 18393052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 21638990 - 21638864
Alignment:
Q  33 acttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataata 132  Q
    ||||||||| || |||||| ||||||||||||| |||||  ||||||||||| | ||| | ||| |||||| ||||||||   |||| | ||||||||||    
T  21638990 acttgtcacatttaagtttaaatgcaacattaaatattggtttgtcaataattctcttacctatatattgtggagagaaa--taatagagtgaaataata 21638893  T
Q  133 aatgattaagggtattata-gaaaacaca 160  Q
    ||||  |||| |||| ||| |||||||||    
T  21638892 aatggctaagagtatcataggaaaacaca 21638864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 39894007 - 39893890
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||| ||  |||||||||||||||| |||||| ||  ||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| ||||    
T  39894007 tgtcacttttaaagttcaatgcaacattaaatattgttttaccaatattacccttaaatatttattgcggagagagaaacatatgaaatgaaatattaaa 39893908  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  39893907 ttaataaggtcattatag 39893890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 12784640 - 12784540
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||| ||||| |||| ||  ||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| ||||    
T  12784640 tgtcactttcaaagttcaatgcaacactaattgttgttttaccaatattacccttatatatttattgcggagagagaaacatatgaaatgaaatattaaa 12784541  T
Q  135 t 135  Q
    |    
T  12784540 t 12784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 25785928 - 25786044
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| || || ||||||||  ||||||||||||||||| ||| | || |||||| ||| ||||    
T  25785928 tgtcactttcaaagttcaatacaacattaaatgttgttttggcattattacccttgattatttattgtagagagagaaatatatgaaatgagatattaaa 25786027  T
Q  135 tgattaagggtattata 151  Q
    |||  |||| |||||||    
T  25786028 tgaggaaggttattata 25786044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 30720732 - 30720772
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  30720732 tctccaaaatggacatgtattttgaaacggagggagtaata 30720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 7466202 - 7466320
Alignment:
Q  35 ttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataa 133  Q
    |||| ||||||||  |||||||||||||||| || ||| ||  ||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| |||    
T  7466202 ttgttactttcaaacttcaatgcaacattaaatagtgttttaccaatattacccttagatatttattgcggagagagaaacatatgaaatgaaatattaa 7466301  T
Q  134 atgattaagggtattatag 152  Q
    || | |||||  |||||||    
T  7466302 attaataaggtcattatag 7466320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 15305228 - 15305270
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaatact 228  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||    
T  15305228 tctccaaaatggacatgtattttgaaacggagggagtactact 15305270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 12723158 - 12723057
Alignment:
Q  35 ttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataa 133  Q
    |||||||||| ||  |||||||||||| ||||| |||| ||  ||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| |||    
T  12723158 ttgtcacttttaaagttcaatgcaacactaattgttgttttaccaatattacccttatatatttattgcggagagagaaacatatgaaatgaaatattaa 12723059  T
Q  134 at 135  Q
    ||    
T  12723058 at 12723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 12807093 - 12807130
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  12807093 tctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 15304859 - 15304822
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  15304859 tctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 25773686 - 25773649
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  25773686 tctccaaaatggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 32389007 - 32389124
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| |||||||  ||||||||||  |||| | ||||| || |||||||||| ||||    
T  32389007 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagatatttattgcggagaaagaaacatatgaaatgaaatattaaa 32389106  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  32389107 ttaataaggccattatag 32389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 8e-89; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 40783681 - 40783869
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40783681 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 40783780  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40783781 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 40783869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 47037880 - 47038062
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47037880 attttaaagaataattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 47037979  T
Q  105 gagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47037980 gagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 47038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 23045303 - 23045491
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045303 gtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 23045402  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  23045403 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 23045491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 321879 - 321691
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321879 gtccattttagagaatatttttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 321780  T
Q  101 tgtagagag-aaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  321779 tgtagagagaaaaaaaaataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaat 321691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 284586 - 284398
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  284586 gtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgcaacattaattattgacttatcaataatacccttgcatatttat 284487  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    |||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  284486 tgtagagagagagaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaat 284398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 23526492 - 23526305
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23526492 gtccattttgaagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttacatatttat 23526393  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    |||||||| | || ||||| |||||||||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  23526392 tgtagagatagaaaaaatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaat 23526305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 24771930 - 24772117
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| || ||||||||| ||||  ||||||||    
T  24771930 gtccattttagagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgttttttcaataatagccttaaatatttat 24772029  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||| ||| || ||||| ||| |||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  24772030 tgtagaaagagaaaaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaat 24772117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 33082997 - 33082810
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||||||||    
T  33082997 gtccattttaaagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtcttctcaataatacccttaaatatttat 33082898  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||| ||| || ||||| ||| |||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  33082897 tgtagaaagagaaaaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaat 33082810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 46771880 - 46771702
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtaga--gag 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||||  |||    
T  46771880 agaataattttgtttcacaatacttatcactttcaagtttcaatgtaacattaattattttcttgtcaataatactcttacatatttattgtagagagag 46771781  T
Q  110 aaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||| ||||| ||||||| |||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  46771780 aaaaaaaatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaat 46771702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 27210979 - 27211176
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||  |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27210979 gtccatttttaagaataattttgtttcacaatacttgtcacatttaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 27211078  T
Q  101 tgtagagag----------aaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    || ||||||          |||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  27211079 tgcagagagagagagagaaaaaaaaaatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaat 27211176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 31003816 - 31003992
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||  ||||| ||||||||||| | ||||||||||||    
T  31003816 ttttggagaataattttgtttcacattacttgccactttcaagtttcaatgcaacattaattgttggtttgtccataatacccttacctatttattgtag 31003915  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataa 180  Q
    ||||| ||  |||| ||| |||||||||||| |||||||||||||||  |||| ||||||| |||||| ||||||||    
T  31003916 agagagaaataatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaataa 31003992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 18396942 - 18396760
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| | ||||||||||||    
T  18396942 ttttggagaataattttgttttacataatttgtcactttcaagtttcaatgcaacattaattattgacttttcaataattcccttacttatttattgtag 18396843  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa--cacacatattttcatcaaaaataacaaaat 186  Q
    ||||| ||  |||| ||||||||||| |||| ||||   ||||||||||||  |||||||| |||||| ||||||||||||||    
T  18396842 agagagaaataatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaat 18396760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 51064778 - 51064927
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||   || |||||||||||||| | |||||||    
T  51064778 gtccattttagagaataattttgtttcactttatttgtcactttcaagtttcaatgcaacgttaattattagtttatcaataatacccttacctatttat 51064877  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattat 150  Q
    |||||||||| ||  |||| |||||||||||||| || ||||||||||||    
T  51064878 tgtagagagagaaataatataatgaaataataaacgagtaagggtattat 51064927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 27143043 - 27143191
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||||||| |||||||||||||||  ||||||||||||||||| | |||||| |||||    
T  27143043 ttttggagaataattttgtttcacattacttgtcact--caagtttcaatacaacattaattattggtttgtcaataatacccttacctatttactgtag 27143140  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    ||||| ||  |||| ||||||||||||||||||||||  ||||||||||||    
T  27143141 agagagaaataatagaatgaaataataaatgattaagaatattatagaaaa 27143191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 40261320 - 40261418
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  40261320 agaataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatacccttacatatttattgtagagaga 40261418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 34458753 - 34458926
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||  ||  | ||||||||||| |||||| ||| |||    
T  34458753 ttttggagaataattttgtttcactttacttgtcactttcaagtttcgatgcaacattaattattggtttaccgataatacccttacatattcattatag 34458852  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaata 179  Q
    ||||| ||  |||| ||||||||||||||| | ||||| |||||||||||| ||||| | |||||| |||||||    
T  34458853 agagagaaataatagaatgaaataataaattagtaaggttattatagaaaaaacacagaatttcataaaaaata 34458926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 40562310 - 40562437
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  40562310 gtccattttgaagaatgattttgttttacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaatgata-ccttgcatatttat 40562408  T
Q  101 tgtagagagaaaacaaataaaatgaaata 129  Q
    || ||||| | || ||||| |||||||||    
T  40562409 tgcagagatagaaaaaatataatgaaata 40562437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 1837860 - 1838039
Alignment:
Q  12 agaataattttgtttcacaa---tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta--ga 106  Q
    |||||||||||||||||  |   ||||||||||||| ||||||||||||||||||||||||||  || |||||||||||||    |||||||||||  ||    
T  1837860 agaataattttgtttcaataatttacttgtcacttttaagtttcaatgcaacattaattattgatttatcaataataccctaatctatttattgtaaaga 1837959  T
Q  107 gagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| ||  ||||  || ||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1837960 gagagaaataatatgataaaataataaatgggtaagggtattatagaaaaaacacataatttcatcaaaaataacaaaat 1838039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 183
Target Start/End: Complemental strand, 24876809 - 24876633
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||||||||||||||||   |||||||||||||||||| ||||||| |||||||||||||  ||||||||||||| ||| | |||||||| |||    
T  24876809 ttttggagaataattttgtttcattttacttgtcactttcaagtgtcaatgcgacattaattattggtttgtcaataatactcttacttatttattctag 24876710  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaa 183  Q
     |||  ||  |||| |||||||| ||||||| | || |||||||||||||| ||||||| | ||||||||||||||||    
T  24876709 tgagtgaaataatagaatgaaatgataaatggtcaaaggtattatagaaaa-acacataatatcatcaaaaataacaa 24876633  T

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Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 40052501 - 40052599
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| | |||| |||||||| ||||||||||    
T  40052501 aataattttgtttcacattacttgtcactttcaagtttcaatgcaacattaattattggtttgtcaataatatcgttgcttatttattatagagagaaa 40052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 31061514 - 31061662
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat 131  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||  |||||||| |||||||| | ||    || |||||||||||    
T  31061514 tacttgtcactctcaagtttcaatgcaacattaattattggtttgacaataataccctcacatatttactgtagagaaataa----tataatgaaataat 31061609  T
Q  132 aaatgattaagggtattatagaaaa--cacacatattttcatcaaaaataacaa 183  Q
    ||||| ||| ||||||||| |||||  |||||||| |||||| |||||||||||    
T  31061610 aaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 52037241 - 52037332
Alignment:
Q  93 atatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||||||||||||||  |||| |||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||| |||||    
T  52037241 atatttattgtagagagaaaa--aatagaatgaaataataaatggttaagagtattatagaaaacacacataattttatcaaaaataataaaat 52037332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 52478170 - 52478033
Alignment:
Q  49 tttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtatt 148  Q
    ||||||| |||||||||||||||  |||||||||||| ||||   ||||||| ||||||||  ||  |||| |||||||| ||||||  |||||| ||||    
T  52478170 tttcaattcaacattaattattgatttgtcaataatatccttatctatttatggtagagagggaaataatagaatgaaatgataaatttttaaggttatt 52478071  T
Q  149 atagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||| ||||| | |||||||||||||||||||||    
T  52478070 atagaaaaaacacaaaatttcatcaaaaataacaaaat 52478033  T

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Target: chr1; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 23166880 - 23167004
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    ||||||||||||||||||||||||| || || | |||||||||||||||| |||||||||||||||  ||||||||||||| |||   |||||||| |||    
T  23166880 ttttagagaataattttgtttcacattatttattactttcaagtttcaatacaacattaattattgatttgtcaataatactcttatctatttattttag 23166979  T
Q  106 agagaaaacaaataaaatgaaataa 130  Q
    ||||  ||  |||||||| ||||||    
T  23166980 agagggaaataataaaataaaataa 23167004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 3657282 - 3657142
Alignment:
Q  46 aagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggt 145  Q
    ||||||||||||||||||||||||||  |||||||||||||  || | |||||||||||||||||  |  |||| ||||||||  |||||| |||||| |    
T  3657282 aagtttcaatgcaacattaattattggtttgtcaataatacttttacctatttattgtagagagaggaataatagaatgaaat--taaatggttaaggtt 3657185  T
Q  146 attatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||  |||||| ||| | |||||| ||||||||||||||    
T  3657184 attatagaaaaaacatacaaaatttcattaaaaataacaaaat 3657142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 14925710 - 14925610
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||||||| |||||||||||||||  ||||||||  ||||||||||||||||||| |||  |||||  ||||||||||||| ||| | ||||||||||||    
T  14925710 ttttagagcataattttgtttcactttacttgtcgttttcaagtttcaatgcaacctta--tattggtttgtcaataatactcttacctatttattgtag 14925613  T
Q  106 aga 108  Q
    |||    
T  14925612 aga 14925610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 1749515 - 1749457
Alignment:
Q  13 gaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattg 71  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  1749515 gaataattttgtttcacaatacttgttacttttaagtttcaatgcaacattagttattg 1749457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 1749462 - 1749372
Alignment:
Q  97 ttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    |||||| ||||||| || ||||| ||| |||||||||||| |||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  1749462 ttattgcagagagagaa-aaatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaat 1749372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 7765186 - 7765078
Alignment:
Q  76 gtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatca 173  Q
    |||||||||| | |||||||||||||| | |||||||| |||    || |||||||||||| ||| ||||||||  ||||||||||||||  ||||| ||    
T  7765186 gtcaataatatcattgcatatttattgcaaagagaaaaaaaa----attaaataataaatggttatgggtattacggaaaacacacatataatttcacca 7765091  T
Q  174 aaaataacaaaat 186  Q
    |||||||||||||    
T  7765090 aaaataacaaaat 7765078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 14350510 - 14350565
Alignment:
Q  13 gaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaatta 68  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||    
T  14350510 gaataattttgttttatattacttgtcactttaaagtttcaatgcaacattaatta 14350565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 25929346 - 25929248
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    ||||| |||||||||||||||||    ||||| | |||||||||||||| |||||||||| |||||  || ||||||||||||||   |||||||||||    
T  25929346 ttttaaagaataattttgtttcatttcacttgcccctttcaagtttcaacgcaacattaaatattgatttatcaataatacccttatctatttattgta 25929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 284370 - 284330
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  284370 tctccaaaatggacatgtattttgaaacggagggagtaata 284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 23045519 - 23045559
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  23045519 tctccaaaatggacatgtattttgaaacggagggagtaata 23045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 14351869 - 14351940
Alignment:
Q  85 acccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    |||||| | ||||||||||||||||||||  |||| || |||||| |||||| ||| || ||||||||||||    
T  14351869 acccttacttatttattgtagagagaaaaataatagaacgaaatattaaatggttacggatattatagaaaa 14351940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 40562733 - 40562792
Alignment:
Q  128 taataaatgattaagggtattatagaaaacacacatat-tttcatcaaaaataacaaaat 186  Q
    ||||||||| |||| |||||||||||||||||| ||||  || |||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataatttatcaaaaataacaaaat 40562792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 41959115 - 41959076
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaat 225  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  41959115 tctccaaaatggacatgtattttgaaacggagggagtaat 41959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 49756684 - 49756742
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagaga 108  Q
    |||||||||||| |||||||||| |||||||| ||||||||   ||||||||| |||||    
T  49756684 ttcaatgcaacaataattattgttttgtcaattatacccttaagtatttattgcagaga 49756742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 3943097 - 3943060
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  3943097 tctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 9588707 - 9588670
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  9588707 tctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 13985007 - 13985044
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  13985007 tctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 44227885 - 44227848
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  44227885 tctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 47038090 - 47038127
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  47038090 tctccaaaatggacatgtattttgaaacggatggagta 47038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 27211204 - 27211240
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagt 222  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  27211204 tctccaaaatggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 13757460 - 13757273
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13757460 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 13757361  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13757360 tgtagagagagaaaaaataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 13757273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 8626735 - 8626547
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8626735 gtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 8626636  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  8626635 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 8626547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 1605831 - 1605644
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1605831 gtccattttagagaataattttgtttcacaatacttgtcactttcaaatttcaatacaacattaattattgtcttgtcaataatacccttgcatatttat 1605732  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  1605731 tgtagagagagaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 1605644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7761553 - 7761366
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  7761553 gtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaatattaattattattttgtcaataatacccttgcatatttat 7761454  T
Q  101 tgtagagaga--aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7761453 tgtagagagaggaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 7761366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 29260445 - 29260257
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  29260445 gtccattttagagaataattttgtttcaaaatacttgtcattttcaagtttcaatgcaacattaattactgtcttgtcaataatacccttacatatttat 29260346  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  29260345 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 29260257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 4129679 - 4129492
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4129679 gtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttgtcaataatacccttgcatatttat 4129581  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  4129580 tgtagagagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaat 4129492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 31559763 - 31559948
Alignment:
Q  2 tccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttatt 101  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31559763 tccattttagagaataattttattttacaatacttgttactttcaagtttcaatgcaacattaattattgtcttgttaataatacccttgcatatttatt 31559862  T
Q  102 gtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaac--acacatattttcatcaaaaataacaaaat 186  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  31559863 gtagagagagaa-aaaaaaaatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaat 31559948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30734507 - 30734695
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| || ||||||||||||| |||||| |||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  30734507 gtccattttggaaaataattttgttttacaatagttgtcattttcaaatttcaatgcaacattaattattatcttatcaataatacccttgcatatttat 30734606  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  30734607 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 30734695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 15064719 - 15064906
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15064719 gtccattttggagaataattttgtttcataatacttgtcactttcaagtttcaatacaacattaattattgtcttgtcaataatacccttgcatatttat 15064818  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||| ||| |||||||||||| ||||||||| |||| |||  ||||||||| |||||||||||||||||||||    
T  15064819 tgtagagagagaaaaaatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaat 15064906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 17942696 - 17942511
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  17942696 gtccattttggagaataattttgttttataatacttgtcactttcaagtttcaatgcaacattaattattgttttgtcaataatacccttacatatttat 17942597  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaa 185  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||  |||||| ||||||||||||||| ||||    
T  17942596 tgtagagagaaaa-aaataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaa 17942511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 8235874 - 8235691
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  8235874 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaatattaattattgtcttatcaataatacccttacatatttattgta 8235775  T
Q  105 gagag--aaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaa 184  Q
    |||||  |||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||| | |||| ||||||||||||    
T  8235774 gagagataaaaaaaatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaa 8235691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 185
Target Start/End: Complemental strand, 26861012 - 26860835
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||| ||||||||||  ||||||||| ||||| |||||||| ||||||| |||||||  |||||||||||||| || | ||||||||  ||    
T  26861012 ttttggagaataagtttgtttcactttacttgtcattttcatgtttcaatacaacattgattattgatttgtcaataatacctttacctatttattacag 26860913  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaa 185  Q
    ||||| ||  |||| ||| |||||||||||| |||||||  |||||||| | ||||| | ||||||||||||||| ||||    
T  26860912 agagagaaataatagaataaaataataaatggttaaggg--ttatagaataaacacaaaatttcatcaaaaataaaaaaa 26860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 20398275 - 20398406
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt--agagagaa 111  Q
    ||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||   ||||||||||||||||| | |||||||| |  ||||||||    
T  20398275 aataattttgtttcactttacttgccactttcaagttttaatgcaacattaattattaaattgtcaataatacccttacctatttattatacagagagaa 20398374  T
Q  112 aacaaataaaatgaaataataaatgattaagg 143  Q
    ||  |||| ||| |||||||||||| ||||||    
T  20398375 aaataatataataaaataataaatggttaagg 20398406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 3798339 - 3798168
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    |||| |||||||||||  |||||||||||||||||||| |||||||||||||||||    || |||||||||||||| | |||||||| |||| |||||     
T  3798339 aatagttttgtttcactttacttgtcactttcaagttttaatgcaacattaattatgagtttatcaataatacccttacctatttattataga-agaaa- 3798242  T
Q  114 caaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
      |||| | ||||||||||||||  ||||||| ||||||  |||||||| |||  ||||| ||||||||||||||    
T  3798241 -taatatattgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaat 3798168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 14287190 - 14287054
Alignment:
Q  51 tcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattat 150  Q
    ||||||||||| |||||||||  || || ||||||| ||| | || |||||||||||||| ||  ||||||||||||||||||| |  ||||||||||||    
T  14287190 tcaatgcaacactaattattgatttatccataatactcttacctagttattgtagagagataaataataaaatgaaataataaaggggtaagggtattat 14287091  T
Q  151 agaaaaca-cacatattttcatcaaaaataacaaaat 186  Q
    |||||| | |||| | |||||| ||||||||||||||    
T  14287090 agaaaaaagcacagaatttcataaaaaataacaaaat 14287054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 30734772 - 30734820
Alignment:
Q  138 ttaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30734772 ttaagggtattatagaaaacacacataatttcatcaaaaataacaaaat 30734820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 11370586 - 11370697
Alignment:
Q  77 tcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaa 174  Q
    ||||||||| |||| | ||||||||||||||||||||  |||  |||| ||||||||||| ||||| |||||||| |||| |||||   | | |||||||    
T  11370586 tcaataatatccttacctatttattgtagagagaaaaataatcgaatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaa 11370685  T
Q  175 aaataacaaaat 186  Q
    ||||||||||||    
T  11370686 aaataacaaaat 11370697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 847831 - 847900
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttatt 101  Q
    ||||||||| ||||||  ||||||||||||||||||||||  ||||||||||||| |||  |||||||||    
T  847831 tacttgtcattttcaaagttcaatgcaacattaattattgctttgtcaataatactcttaaatatttatt 847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 1814835 - 1814762
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataata 85  Q
    ||||||||||| ||||||  ||||||||||||| || || |||||||||||| |||||||  ||||||||||||    
T  1814835 agaataattttatttcactttacttgtcacttttaatttccaatgcaacattgattattggtttgtcaataata 1814762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 31244951 - 31244834
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||||| |||| || |||||| ||  |||  ||||||||||| |||||| ||||| || |||||||||| ||||    
T  31244951 tgtcactttcaaagttcaatgcaacattaattcttgttttatcaatattattcttagatatttattgtggagagagaaacatatgaaatgaaatattaaa 31244852  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  31244851 ttaataaggtcattatag 31244834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 21277574 - 21277645
Alignment:
Q  116 aataaaatgaaataataaatgattaagggtattatag-aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| |||||| || ||||| |||||||||||||||| |||||||| | |||||||| ||||||||||||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaaacacataaattttcataaaaaataacaaaat 21277645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 17251457 - 17251341
Alignment:
Q  37 gtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaat 135  Q
    |||||||||||  |||||||||||||||| | |||| ||  ||||| |||||||  |||||||||| | ||||| ||||| || |||||||||| |||||    
T  17251457 gtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagatatttattgcaaagagagaaacatatgaaatgaaatattaaat 17251358  T
Q  136 gattaagggtattatag 152  Q
     | |||||  |||||||    
T  17251357 taataaggtcattatag 17251341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 23777349 - 23777452
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaatgattaagggtatt 148  Q
    |||||||||||||||| | |||| ||  ||||| || ||||||  ||||||||| |||||| ||| | || |||||||||| ||||||| ||||| ||||    
T  23777349 ttcaatgcaacattaaatgttgttttaccaatattatccttgctcatttattgtggagagagaaatatatgaaatgaaatattaaatgaataaggttatt 23777448  T
Q  149 atag 152  Q
    ||||    
T  23777449 atag 23777452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 30235425 - 30235487
Alignment:
Q  94 tatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    |||||||| || ||||| ||  |||| |||||||||||||||||||||| ||| |||||||||    
T  30235425 tatttattatacagagagaaataatagaatgaaataataaatgattaagagtaatatagaaaa 30235487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 33845449 - 33845495
Alignment:
Q  140 aagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||||    
T  33845449 aagggtactatagaaaaaatacataatttcatcaaaaataacaaaat 33845495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 879317 - 879350
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataa 83  Q
    ||||||||||||||||||||||| ||||||||||    
T  879317 ttcaatgcaacattaattattgttttgtcaataa 879350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 1605616 - 1605579
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  1605616 tctccaaaatggacatgtattttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 7761338 - 7761301
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  7761338 tctccaaaatggacatgtattttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 22784870 - 22784793
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| || |||| | |||||||||| |||||||||    
T  22784870 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattatccttacttatttattgtggagagaaaa 22784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 29260229 - 29260192
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  29260229 tctccaaaatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 7170191 - 7170291
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  || || ||||| |  ||||||||||  |||||| ||||| ||||||||||||| ||||    
T  7170191 tgtcactttcaaaattcaatgcaacattaaatgttgttttaccattattacccctaaatatttattgcggagagagaaacatataaaatgaaatattaaa 7170290  T
Q  135 t 135  Q
    |    
T  7170291 t 7170291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 19811995 - 19812111
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| |  || |||||||   ||||||||||||||||| ||  |||| |||||| ||| ||||    
T  19811995 tgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttaattatttattgtagagagagaagtaaatgaaatgagatattaaa 19812094  T
Q  135 tgattaagggtattata 151  Q
    |||| |||| |||||||    
T  19812095 tgatgaaggttattata 19812111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 24356256 - 24356156
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  ||||||||| |||||| | |||| || |||||| |||||||  |||||||||   |||||| ||||| || |||||||||| ||||    
T  24356256 tgtcactttcaaagttcaatgcatcattaaatgttgttttatcaatattacccttagatatttattccggagagagaaacatatgaaatgaaatattaaa 24356157  T
Q  135 t 135  Q
    |    
T  24356156 t 24356156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 24948282 - 24948382
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| || ||| ||   |||| |||||||| ||||||||||  |||||| ||||  || |||||||||| ||||    
T  24948282 tgtcactttcaaaattcaatgcaacattaaatagtgttttactaatattacccttggatatttattgcggagagagaaacgtatgaaatgaaatattaaa 24948381  T
Q  135 t 135  Q
    |    
T  24948382 t 24948382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 3e-88; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 12071813 - 12071626
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12071813 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattcttgtcttgtcaataatacccttgcatatttat 12071714  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12071713 tgtagagagagaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 12071626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 40122511 - 40122697
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40122511 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 40122610  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40122611 tgtagagagaaaa-aaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 40122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 24706271 - 24706459
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706271 gtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 24706370  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24706371 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 24706459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 25704904 - 25704716
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25704904 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcagtgcaacattaattattgtcttgtcaataatacccttgcatatttat 25704805  T
Q  101 tgtagagag-aaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25704804 tgtagagagaaaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 25704716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 22321296 - 22321479
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321296 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 22321395  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  22321396 gagagagaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaat 22321479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 21310674 - 21310490
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310674 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 21310575  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||||   ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  21310574 tgtagagagaa---aaaaaaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 21310490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 50768115 - 50767929
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50768115 gtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttacatatttat 50768016  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacac--atattttcatcaaaaataacaaaat 186  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  50768015 tgtagagagaaaa-aaataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaat 50767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 14261297 - 14261109
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14261297 gtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 14261198  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  14261197 tgtagagagagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaat 14261109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 44569090 - 44568902
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44569090 gtccattttagagaataattttgtttcacaatacttgtccctttcatgtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 44568991  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  44568990 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaat 44568902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 21661559 - 21661747
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21661559 gtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtcaataatacccttgcatatttat 21661658  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||| |||||    
T  21661659 tgtagagagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaat 21661747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 21670323 - 21670511
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21670323 gtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgcaacattaagtattgtcttgtcaataatacccttgcatatttat 21670422  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||| |||||    
T  21670423 tgtagagagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaat 21670511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20249038 - 20249224
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20249038 gtccattttggagaataattttgtttcacaatacctgtctctttcaagtttcaatgcaatattaattattgtcttgtcaataatacccttacatatttat 20249137  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa-acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||| ||| |||||||||||| |||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  20249138 tgtagagagagaaaaaatagaataaaataataaatggttaagggtattatagaaacacacacataatttcttcaaaaataacaaaat 20249224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 34324627 - 34324794
Alignment:
Q  22 tgtttcacaatacttgtcactttca-agtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataa 120  Q
    ||||||| ||||||||||  ||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  34324627 tgtttcataatacttgtccattttagagtttcaatgcaacattaatgattttcttgtcaataatacccttgcatatttattgtagagagagaaaaaataa 34324726  T
Q  121 aatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34324727 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 34324794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 21065011 - 21064834
Alignment:
Q  4 cattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 103  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  21065011 cattttagagaataattttgtttcacaatacttatcgctttcaaatttcaatgcaacattaattattgtcttgacaataatactcttacatatttattgt 21064912  T
Q  104 agagag--aaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaata 179  Q
    ||||||  |||| ||||| |||||||||||||||  ||||| |||||||| |||||||||||| ||||||||||||||    
T  21064911 agagagaaaaaaaaaatagaatgaaataataaatagttaagagtattataaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 31892475 - 31892303
Alignment:
Q  11 gagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga 110  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| | |||||    
T  31892475 gagaataattttgttttacaatacttgtcacttttaagttttaatgtaacattaattattgtcttgtcaataatagccttgcatatttattgcaaagaga 31892376  T
Q  111 aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
     || ||||| |||||||||||||||| | || |||||||||||||  ||||||| ||||||||||||||| |||||    
T  31892375 gaa-aaatagaatgaaataataaatggtcaaaggtattatagaaa--acacataatttcatcaaaaataataaaat 31892303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 19692971 - 19692814
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  || ||||||| |||||| | |||||||||||    
T  19692971 attttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataacacccttacttatttattgta 19692872  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    |||||| ||  |||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  19692871 gagagagaaataatagaatgaaataataaatgagtaaggatattatagaaaaaacaca 19692814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 19703556 - 19703399
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  || ||||||| |||||| | |||||||||||    
T  19703556 attttagagaataattttgtttcactttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataacacccttacttatttattgta 19703457  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacaca 162  Q
    |||||| ||  |||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  19703456 gagagagaaataatagaatgaaataataaatgagtaaggatattatagaaaaaacaca 19703399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 6128984 - 6129160
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaa 111  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||   |||||||||||||||||     
T  6128984 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattggtttatcaataatacccttatctatttattgtagagagag 6129083  T
Q  112 aacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatat--tttcatcaaaaataacaaaat 186  Q
    ||  |||  |||||||||||||||||||||||||||| ||||||| | ||| |   ||| |||||||||||||||||    
T  6129084 aaataatggaatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaat 6129160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 183
Target Start/End: Original strand, 18507295 - 18507472
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| | |||||||| |||    
T  18507295 ttttagagcataattttgtttcacatttcttgtcactttcaagtttcaatgcaacattaattattgacttgtcaataatattcttacttatttattatag 18507394  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaa 183  Q
    ||||| ||  |||| |||||||||||||||  | || ||||||||||  |||||||||| | ||||||||||||||||||    
T  18507395 agagagaa-taatataatgaaataataaattgtcaa-ggtattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 185
Target Start/End: Complemental strand, 32543727 - 32543547
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||||||||||||||||||||||   ||||||| |||||||||||| ||||| |||||||||||||  |||||| ||||||||||   ||||||||||||    
T  32543727 ttttagagaataattttgtttcattttacttgttactttcaagttttaatgcgacattaattattggtttgtcattaatacccttatctatttattgtag 32543628  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattat-agaaaacacacatattttcatcaaaaataacaaaa 185  Q
    | | | ||  ||||||||||||||||||||||||||||||||||| | |||||||| | | ||||||||||| ||||||||    
T  32543627 aaaaagaaataataaaatgaaataataaatgattaagggtattataaaaaaacacaaagaatttcatcaaaattaacaaaa 32543547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 54 - 186
Target Start/End: Original strand, 20714426 - 20714560
Alignment:
Q  54 atgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattataga 153  Q
    ||||||||||||||||||  |||||||||||||||||   |||||||| |||| ||| ||  |||| |||||||||||||||| |||| |||||||||||    
T  20714426 atgcaacattaattattggtttgtcaataatacccttatttatttattttagaaagataaataatataatgaaataataaatggttaa-ggtattataga 20714524  T
Q  154 aa---acacacatattttcatcaaaaataacaaaat 186  Q
    ||   ||||||||| |||||||||||||||||||||    
T  20714525 aaaacacacacatagtttcatcaaaaataacaaaat 20714560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 50839060 - 50839125
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattg 71  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  50839060 ttttggagaataattttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattg 50839125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 48652472 - 48652370
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||  ||||||| ||||| |||||| ||||| |||||||||||||  || | |||||||||||| | ||||||  ||||    
T  48652472 ttttggagaataattttgtttcactttacttgttactttaaagttttaatgcgacattaattattgatttattaataatacccttacctatttaacgtag 48652373  T
Q  106 aga 108  Q
    |||    
T  48652372 aga 48652370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 1146249 - 1146143
Alignment:
Q  38 tcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaatg 136  Q
    |||||||||| ||||||||||||||||| | |||| ||| |  || ||||||||  ||||||||||||||||| ||| | || |||||| ||| ||||||    
T  1146249 tcactttcaaatttcaatgcaacattaaatgttgttttgcctttattacccttgattatttattgtagagagagaaatatatgaaatgagatattaaatg 1146150  T
Q  137 attaagg 143  Q
    || ||||    
T  1146149 atgaagg 1146143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 38617857 - 38617935
Alignment:
Q  35 ttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    |||||||||||||  || ||||||||||||| |||||| || |||||| || ||||  |||||||||| ||||||||||    
T  38617857 ttgtcactttcaaagtttaatgcaacattaaatattgttttatcaatattatccttatatatttattgcagagagaaaa 38617935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 22321507 - 22321544
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22321507 tctccaaaatggacatgtattttgaaacggaaggagta 22321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 30939197 - 30939314
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| |||||||| ||||||||||  |||||| ||||  || |||||||||| ||||    
T  30939197 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttggatatttattgcggagagagaaacgtatgaaatgaaatattaaa 30939296  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  30939297 ttaataaggtcattatag 30939314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 1615255 - 1615140
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaat 135  Q
    |||||||||||| ||||||| ||||||||| | |||| ||| |  || |||| |||  |||||||||||||||| ||| | || |||||| ||| |||||    
T  1615255 tgtcactttcaaatttcaatacaacattaaatgttgttttgcctttattaccattgattatttattgtagagag-aaatatatgaaatgagatattaaat 1615157  T
Q  136 gattaagggtattatag 152  Q
    ||| |||| ||||||||    
T  1615156 gatgaaggttattatag 1615140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 1988150 - 1988100
Alignment:
Q  138 ttaagggtattatagaaaacac--acatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaat 1988100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 51777841 - 51777772
Alignment:
Q  16 taattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 86  Q
    ||||||||||| ||  ||||||||||||| |||||  | |||||||||||||||||  |||||||||||||    
T  51777841 taattttgttttactttacttgtcacttttaagtta-agtgcaacattaattattggtttgtcaataatac 51777772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 6150736 - 6150853
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| |  || ||||||||  ||||||||||||||||| ||  |||| || ||| ||| ||||    
T  6150736 tgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttgattatttattgtagagagagaagtaaatgaagtgagatattaaa 6150835  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  6150836 tgatgaaggttattatag 6150853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 12071598 - 12071561
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  12071598 tctccaaaatggacatgtattttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 14261081 - 14261044
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  14261081 tctccaaaatggacatgtattttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 17038377 - 17038410
Alignment:
Q  54 atgcaacattaattattgtcttgtcaataatacc 87  Q
    |||||||||||||||||||||| |||||||||||    
T  17038377 atgcaacattaattattgtcttatcaataatacc 17038410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 21310462 - 21310425
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  21310462 tctccaaaatggacatgtattttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 24706487 - 24706524
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  24706487 tctccaaaatggacatgtattttgaaacggatggagta 24706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 25704688 - 25704651
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  25704688 tctccaaaatggacatgtattttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 26676714 - 26676751
Alignment:
Q  124 gaaataataaatgattaagggtattatagaaaacacac 161  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacac 26676751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 34324823 - 34324860
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  34324823 tctccaaaatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 38865993 - 38866066
Alignment:
Q  84 tacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    |||||||| |||||| ||||||||||| ||| | ||  ||||| ||| ||||||||||||| ||||||||||||    
T  38865993 tacccttggatatttgttgtagagagagaaatatatgtaatgagatattaaatgattaaggttattatagaaaa 38866066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 40122725 - 40122762
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  40122725 tctccaaaatggacatgtattttgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 44568870 - 44568837
Alignment:
Q  190 caaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||| ||||||||||||||    
T  44568870 caaaatggacatgtattttgaaacggaaggagta 44568837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 51777755 - 51777687
Alignment:
Q  116 aataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaa 185  Q
    ||||| ||||||||||||||| ||||| ||||||||||||| ||||| | ||| ||||||| ||| ||||    
T  51777755 aataacatgaaataataaatggttaagagtattatagaaaa-acacagaattttatcaaaattaaaaaaa 51777687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 56576305 - 56576228
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    ||||||||||||  |||||||||||||||| |||||| ||  ||||| || ||||   |||||||||| |||||||||    
T  56576305 tgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattatccttagttatttattgtggagagaaaa 56576228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 8735399 - 8735467
Alignment:
Q  4 cattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgt 72  Q
    |||||||||||| |||||||||||    || |||||||||||||  |||||||||| ||||| ||||||    
T  8735399 cattttagagaaaaattttgtttctatttaattgtcactttcaaagttcaatgcaatattaaatattgt 8735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 20714349 - 20714413
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattatt 70  Q
    ||||||||||||| ||| ||||| | || || ||| ||| || ||||||||||||||||||||||    
T  20714349 ttttagagaataaatttatttcatattatttatcatttttaaatttcaatgcaacattaattatt 20714413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 26906591 - 26906555
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgt 72  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  26906591 tgtcactttcaaggttcaatgcaacattaaatattgt 26906555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 37551867 - 37551759
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | ||||  || |  || ||||||||  ||||||||| ||||||| ||||| || |||||||||| ||||    
T  37551867 tgtcactttcaaagttcaatacaacattaaatgttgttgtgcctttattacccttggttatttattgcagagagagaaacatatgaaatgaaatattaaa 37551768  T
Q  135 tgattaagg 143  Q
    |||| ||||    
T  37551767 tgatgaagg 37551759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 5e-87; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 1646540 - 1646354
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  1646540 gtccattttagagaataattttgtttcacaatacttatcactttcaagtttcaatgcaacattaagtattatcttgtcaataatacccttgcatatttat 1646441  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646440 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 1646354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 3519160 - 3518973
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3519160 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgtaacattaattattgtcttgtcaataatacccttgcatatttat 3519061  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaaca--cacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3519060 tgtagagagagaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 3518973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 23367042 - 23366854
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23367042 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatacaacattaattattgtcttgtcaataatacccttgcatatttat 23366943  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  23366942 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaat 23366854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 39938423 - 39938235
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938423 gtccattttagagaataattttgtttcacaatacttgtcacttttaagttttaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 39938324  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  39938323 tgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 39938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22388162 - 22388335
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388162 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 22388261  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaa 174  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22388262 tgtagagagaaa--aaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 1102754 - 1102568
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1102754 gtccatttgagagaataattttgtttcacaatactcgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataacacccttgcatatttat 1102655  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1102654 tgtagagagaaaa-aaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 1102568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 37673767 - 37673949
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37673767 gtccattttagagaataactttgtttcaaaatacttgtcacttccaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 37673866  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||| |||   |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  37673867 tgtagagagaaaaaaaa---aat--aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 37673949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 12969764 - 12969951
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||    
T  12969764 gtccattttggagaataattttgtttcacaatacatgtctctttcaagtttcaatgcaatattaattattgtcttctcaataatacccttaaatatttat 12969863  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||| ||| |||||||||||| ||||||||||||||||||  | ||||||| |||||||||||||||||||||    
T  12969864 tgtagagagagaaaaaatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaat 12969951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 39561924 - 39562097
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||     |||||||||| || |||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||    
T  39561924 ttttggagaataattttgtttcac-----ttgtcacttttaaatttcaatgcaacattaattattggtttgtcaataatacccttacttatttattgtag 39562018  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||   |||| |||  ||||||||||| |||||||||||| | |||||| | ||| |||| ||||||||||||||||    
T  39562019 agagaaa--taatagaatacaataataaatggttaagggtattagaaaaaacaaaaataatttcttcaaaaataacaaaat 39562097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 34242221 - 34242042
Alignment:
Q  7 tttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtaga 106  Q
    ||||||||||||||||||||||   |||| |||||||| |||||| ||||||| ||||| |||||  || ||||||||| |||| | |||||||||||||    
T  34242221 tttagagaataattttgtttcattttactggtcacttttaagttttaatgcaatattaaatattggtttatcaataatatccttacctatttattgtaga 34242122  T
Q  107 gagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| ||  || | ||||||||||||||||  ||||||| ||| | |||| ||||| | |||||||||||||||||||||    
T  34242121 gagagaaataacataatgaaataataaatgggtaagggtgttacaaaaaaaacacagaatttcatcaaaaataacaaaat 34242042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 4917998 - 4917839
Alignment:
Q  17 aattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaa 116  Q
    ||||||| |||||| |||||||||||||| | ||| ||| ||||||||||||||| |||||||||| | ||||| | ||||||| |||||| || ||  |    
T  4917998 aattttgcttcacattacttgtcactttcgaattttaattcaacattaattattggcttgtcaatagttcccttacctatttatggtagagtgagaaata 4917899  T
Q  117 ataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaa 176  Q
    ||| ||||||||||||||| ||||||  |||||||||||| ||||||| ||| |||||||    
T  4917898 atagaatgaaataataaataattaagattattatagaaaaaacacataattttatcaaaa 4917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 14780023 - 14779844
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| ||||||||||||||||||   |||||||||||||||||||||||||||| |||||  |||   |||| || ||||||||||| |||||| |||||    
T  14780023 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgcaagattaacgatttgtttgttaa-aatacccttgcctatttactgtag 14779925  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||| | ||  |||| ||||||||||||||||| |||  |||||||||  |||||||| ||| ||||||||||||||| |||||    
T  14779924 agaaagaaataatataatgaaataataaatgagtaa--gtattatagaaaaaacacaaataatttcatcaaaaataaaaaaat 14779844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40756935 - 40757024
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataataccctt 90  Q
    ||||||||| |||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  40756935 gtccattttggagaataattttgtttcactttagttgtcactttcaagtttcaatgcaacattaattattggtttatcaataataccctt 40757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 19976568 - 19976397
Alignment:
Q  14 aataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||   || ||||||||| | ||   ||||||||||||||||| |     
T  19976568 aataattttgtttcattttacttgtcactttcaagtttcaatgcaacattaattattagtttatcaataatatcattatctatttattgtagagagaga- 19976470  T
Q  114 caaataaaatgaaataataaatgattaagggtattatag-aaaacacacatattttcatcaaaaataacaaaat 186  Q
      |||| ||| |||||||||||   |||||||||||||| |||| ||||||| ||| ||||||| || ||||||    
T  19976469 -taatataataaaataataaataggtaagggtattatagaaaaaaacacataattttatcaaaagtaccaaaat 19976397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 28110139 - 28110220
Alignment:
Q  21 ttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattg 102  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||    
T  28110139 ttgtttcacattacttgtcattttcaagtttcaatgcaacattaattattggtttatcaataatacccttacatatttattg 28110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 37284547 - 37284652
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||  || ||| |||||| ||| | ||||||||||||    
T  37284547 ttttggagaataattttgtttcactttacttgtcattttcaagtttcaatgcaacatt-attattgatttatcactaatactcttacctatttattgtag 37284645  T
Q  106 agagaaa 112  Q
    |||||||    
T  37284646 agagaaa 37284652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 28401396 - 28401471
Alignment:
Q  38 tcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaa 113  Q
    ||||||||||||||||| || |||||||||||||  ||||||||||||||||||| || |||||||| ||||||||    
T  28401396 tcactttcaagtttcaaggccacattaattattgatttgtcaataatacccttgcctaattattgtaaagagaaaa 28401471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 32838964 - 32839022
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattatt 70  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||    
T  32838964 agaataattttgtttcattttacttgtcactttcaagtttcaatgcaatattaattatt 32839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 1002786 - 1002891
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat 131  Q
    ||||||||| |||||| | |||||||||||||||||||||  || | ||| ||| ||||   ||||||||||||||||| ||  |||| |||||||||||    
T  1002786 tacttgtcattttcaaatctcaatgcaacattaattattggtttattaattatatccttatctatttattgtagagagagaaataatagaatgaaataat 1002885  T
Q  132 aaatga 137  Q
    ||||||    
T  1002886 aaatga 1002891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 36447506 - 36447426
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatac 86  Q
    ||||||||||||||||||||||||  || | ||||||||||| |||||||||||  ||||||||||  || ||||||||||    
T  36447506 ttttagagaataattttgtttcactttattcgtcactttcaaatttcaatgcaatgttaattattggtttatcaataatac 36447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 18078215 - 18078121
Alignment:
Q  94 tatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa--cacacatattttcatcaaaaataacaaaat 186  Q
    ||||||||||||||||||||  |||| |||||| ||||||||| | ||| |||||||||||||  |||| | |  ||||||||||||||||||||    
T  18078215 tatttattgtagagagaaaaataatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaat 18078121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 24777867 - 24777758
Alignment:
Q  53 aatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatag 152  Q
    |||||||||||||||||||  || | ||||| | | ||   |||||||| |||||||||||  |||| ||||||||||||||| | |||||||||||||     
T  24777867 aatgcaacattaattattgatttattaataaaatctttagctatttattctagagagaaaaataatagaatgaaataataaataaataagggtattataa 24777768  T
Q  153 aaaacacaca 162  Q
    |||| |||||    
T  24777767 aaaaaacaca 24777758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 32840273 - 32840387
Alignment:
Q  77 tcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa-----acacacatattttcat 171  Q
    |||||||||||||| | |||||||| || ||||| ||  |||| |||||||||||||||   ||| |||||||||||||     | ||||| | ||||||    
T  32840273 tcaataatacccttacttatttattttacagagagaaataatagaatgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcat 32840372  T
Q  172 caaaaataacaaaat 186  Q
    |||||||||||||||    
T  32840373 caaaaataacaaaat 32840387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 9370013 - 9370130
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||| ||||| | |||| || |||||| |||||||  ||||||||||  |||||| ||||| || |||||||||| ||||    
T  9370013 tgtcactttcaaagttcaatgcaatattaagtgttgttttatcaatattacccttaaatatttattgcggagagagaaacatatgaaatgaaatattaaa 9370112  T
Q  135 tgattaagggtattatag 152  Q
    | | |||||  |||||||    
T  9370113 ttaataaggtcattatag 9370130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 13849919 - 13849819
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  ||||||||| |||||| | |||| || |||||| |||| ||  |||||||||| ||||||| ||||| || |||||||||| ||||    
T  13849919 tgtcactttcaaagttcaatgcatcattaaatgttgttttatcaatattacctttagatatttattgcagagagagaaacatatgaaatgaaatattaaa 13849820  T
Q  135 t 135  Q
    |    
T  13849819 t 13849819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 14117660 - 14117812
Alignment:
Q  35 ttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataa 133  Q
    |||||| ||||||  ||||||| ||| |||| | || | |||||||||||||||||   | ||||||  ||||||| ||| | || |||| | |||||||    
T  14117660 ttgtcattttcaaagttcaatgtaacgttaactgttattttgtcaataatacccttaactgtttattccagagagataaatagatgaaataagataataa 14117759  T
Q  134 atgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    ||  ||||| ||||||||| ||| | ||||| ||||||||||| |||||||||    
T  14117760 atacttaagagtattataggaaaaagacataatttcatcaaaagtaacaaaat 14117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 34222090 - 34222058
Alignment:
Q  191 aaaatggacatgtattttaaaacggaaggagta 223  Q
    |||||||||||||||||||||||||||||||||    
T  34222090 aaaatggacatgtattttaaaacggaaggagta 34222058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 43077331 - 43077431
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| |||||| ||  ||||| |||||||  ||||||||||  |||||| ||||| || |||| ||||| ||||    
T  43077331 tgtcactttcaaagttcaatgcaacattaaatattgttttaccaatattacccttagatatttattgcggagagagaaacatatgaaataaaatattaaa 43077430  T
Q  135 t 135  Q
    |    
T  43077431 t 43077431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 1102540 - 1102503
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  1102540 tctccaaaatggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 3518945 - 3518908
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  3518945 tctccaaaatggacatgtattttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 12969979 - 12970016
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  12969979 tctccaaaatggacatgtattttgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 13753994 - 13754111
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| || |||||| |||||||   |||||||||  |||||| ||| | || | |||||||| ||||    
T  13753994 tgtcactttcaaagttcaatacaacattaaatgttgttttatcaatattacccttagttatttattgcggagagagaaatatatgacatgaaatattaaa 13754093  T
Q  135 tgattaagggtattatag 152  Q
    ||| ||||| ||||||||    
T  13754094 tgaataaggctattatag 13754111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 27901005 - 27901106
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat 131  Q
    ||||| ||||||||||||||| ||| || |||||| |||   ||||||||||||||||| | || ||| | ||| |||| ||  |||| |||||||||||    
T  27901005 tacttttcactttcaagtttcgatgtaatattaataattaatttgtcaataatacccttacttaattactatagtgagataaataatataatgaaataat 27901104  T
Q  132 aa 133  Q
    ||    
T  27901105 aa 27901106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 28967435 - 28967318
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| |  || ||||||||  ||||||| ||||||||| ||  |||| |||||| ||| ||||    
T  28967435 tgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttgattatttatcgtagagagagaagtaaatgaaatgagatattaaa 28967336  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  28967335 tgataaaggttattatag 28967318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 34224394 - 34224431
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  34224394 tctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 23366826 - 23366790
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagt 222  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  23366826 tctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 32323706 - 32323746
Alignment:
Q  50 ttcaatgcaacattaattattgtcttgtcaataataccctt 90  Q
    ||||||||||||| ||||||||| ||||||| |||||||||    
T  32323706 ttcaatgcaacatcaattattgttttgtcaaaaataccctt 32323746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 32854984 - 32854884
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||||||||||||| | |||| ||  ||||| |||||||  || |||||||  |||||| ||||| || |||||||||| ||||    
T  32854984 tgtcactttcaaagttcaatgcaacattaaatgttgttttaccaatattacccttagatgtttattgcggagagagaaacatatgaaatgaaatattaaa 32854885  T
Q  135 t 135  Q
    |    
T  32854884 t 32854884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 414 - 227
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  414 gtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaa-tattgtcttgtcaataatacccttgcatatttat 316  T
Q  101 tgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  315 tgtagagagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaat 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 291 - 475
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| | || |||||||||    
T  291 gtccattttagagaataattttgtttcacaatacttgtcacttttaaattttaatgcaacattaattattgtcttgtcaataatatcattacatatttat 390  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||||||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  391 tgtagagagagaa-aaatagaatgaaataataaatgattaagggtattataaaaaacacacataattttatcaaaaataacaaaat 475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 45706 - 45519
Alignment:
Q  1 gtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttat 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| || ||||||||| ||||  ||||||||    
T  45706 gtccattttagagaataattttgtttcacaatacatgtctctttcaaatttcaatgcaatattaattattgtattatcaataataaccttaaatatttat 45607  T
Q  101 tgtagagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaaaataacaaaat 186  Q
    |||||| ||| || ||||| ||| |||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  45606 tgtagaaagagaaaaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaat 45519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 1 - 111
Alignment:
Q  79 aataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaatgattaagggtattatagaaa--acacacatattttcatcaaa 175  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  1 aataatacccttgcatatttattgtagagagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaa 100  T
Q  176 aataacaaaat 186  Q
    |||||||||||    
T  101 aataacaaaat 111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 65199 - 65375
Alignment:
Q  11 gagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga 110  Q
    |||||||||||||||||| | ||||||||||||| || ||||||||||| |||||||||||  |||||||||||||||||   |||||| |||||| |||    
T  65199 gagaataattttgtttcatattacttgtcacttttaaatttcaatgcaatattaattattggtttgtcaataatacccttatctattta-tgtagaaaga 65297  T
Q  111 aaacaaataaaatgaaataataaatgattaagggtattatag---aaaacacacatattttcatcaaaaataacaaaa 185  Q
     || ||||| |||||||||||||||| |||||||||||||||   |||||||| ||| ||||||||||||||| ||||    
T  65298 gaaaaaatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 6930 - 7079
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    |||| |||||||||||||||||| | || |||||  ||| |||||||||||||||||||||||||| | |||||||||||| ||| | ||||||||||||    
T  6930 ttttggagaataattttgtttcatattatttgtccgttt-aagtttcaatgcaacattaattattgacgtgtcaataatactcttacttatttattgtag 7028  T
Q  106 agagaaaacaaataaaatgaaataataaatgattaagggtattatagaaaa 156  Q
    ||||||||  |||| ||| ||||||||| | |||||| |||||||||||||    
T  7029 agagaaaaataatataataaaataataattaattaagtgtattatagaaaa 7079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 7916 - 7788
Alignment:
Q  6 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtag 105  Q
    ||||| |||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||| |  ||||||||||||| ||| | |||||||||||     
T  7916 ttttaaagaataattttaattcacattacttgtcactttcaagttttaatgcaacattaattatcggtttgtcaataatactcttacctatttattgtaa 7817  T
Q  106 agagaaaacaaataaaatgaaataataaa 134  Q
    ||||| ||  |||| ||||||||||||||    
T  7816 agagagaaacaatagaatgaaataataaa 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 15351 - 15499
Alignment:
Q  5 attttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgta 104  Q
    ||||||| ||| ||| |||||||||  ||| ||| ||||| |||||||||||||||||||||||| |  ||||||||||||| ||| | | |||||||||    
T  15351 attttagtgaacaatattgtttcactttacatgtaacttttaagtttcaatgcaacattaattatcggtttgtcaataatacgcttacttttttattgta 15450  T
Q  105 gagagaaaacaaataaaatgaaataataaatgattaagggtattatagaaa 155  Q
    ||||||||   |||  |||||||||||||||| |||||||||| |||||||    
T  15451 gagagaaa--taattgaatgaaataataaatggttaagggtataatagaaa 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 71325 - 71231
Alignment:
Q  12 agaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtaga 106  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||||||| |||||||||||  |||| ||| |||||||| | |||||||||||||    
T  71325 agaataattttatttcacattacttgtcacttttaagtttgaatgcaaaattaattattggtttgttaattatacccttacctatttattgtaga 71231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 70961 - 70889
Alignment:
Q  116 aataaaatgaaataataaatgattaagggtattatag--aaaacacacatattttcatcaaaaataacaaaat 186  Q
    |||| |||||||||||||||| |||||||| ||| ||  |||||||||| | |||||||||||||||||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaat 70889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 252633 - 252750
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| |||||| |||||  || ||||||||  ||||||||||||||||| ||  |||| |||||| ||| ||||    
T  252633 tgtcactttcaaagttcaatacaacattaaatattgttttgtctttattacccttgattatttattgtagagagagaagtaaatgaaatgagatattaaa 252732  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  252733 tgatgaaggttattatag 252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 10964 - 10837
Alignment:
Q  32 tacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagagaaaacaaataaaatgaaataat 131  Q
    |||||||||| || ||||||  |||||||||||| |||||  ||||||||||||  ||| | |||||||||| ||||||||   |||| | |||||||||    
T  10964 tacttgtcacatttaagtttatatgcaacattaaatattgatttgtcaataatattcttacctatttattgtggagagaaa--taatatagtgaaataat 10867  T
Q  132 aaatgattaagggtattata-gaaaacaca 160  Q
    |||||| |||| |||| ||| |||||||||    
T  10866 aaatgactaagagtatcataggaaaacaca 10837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 23175 - 23292
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagag-aaaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| |||||| || ||||||||  |||||||||  ||||| |||| | ||||||||| ||| ||||    
T  23175 tgtcactttcaaagttcaatacaacattaaatgttgttttgtcattattacccttggttatttattgccgagagaaaaatatataaaatgagatattaaa 23274  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  23275 tgataaaggttattatag 23292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0939 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 1184 - 1110
Alignment:
Q  11 gagaataattttgtttcacaatacttgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataata 85  Q
    |||||||||||||||| |   ||||||||| ||| ||||||| ||||||||||||||||||  || |||||||||    
T  1184 gagaataattttgttttattttacttgtcatttttaagtttcgatgcaacattaattattggtttatcaataata 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 96263 - 96146
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaa 134  Q
    ||||||||||||  |||||| ||||||||| | |||| ||| |  || ||||||||  ||||||||||||||||| ||  |||| |||||| ||| ||||    
T  96263 tgtcactttcaaagttcaatacaacattaaatgttgttttgcctttattacccttgattatttattgtagagagagaagtaaatgaaatgagatattaaa 96164  T
Q  135 tgattaagggtattatag 152  Q
    |||| |||| ||||||||    
T  96163 tgatgaaggttattatag 96146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 14451 - 14335
Alignment:
Q  37 gtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgtagagaga-aaacaaataaaatgaaataataaat 135  Q
    |||| ||||||  |||||| ||||||||| | |||| |||||  || ||||||||  ||||||||||||||||| ||  |||| |||||| ||| |||||    
T  14451 gtcattttcaaagttcaatacaacattaaatgttgttttgtctttattacccttgattatttattgtagagagagaagtaaatgaaatgagatattaaat 14352  T
Q  136 gattaagggtattatag 152  Q
    ||| |||| ||||||||    
T  14351 gatgaaggttattatag 14335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 147330 - 147263
Alignment:
Q  36 tgtcactttcaagtttcaatgcaacattaattattgtcttgtcaataatacccttgcatatttattgt 103  Q
    ||||||||||||  |||||||||||||||| | |||| || |||||| |||||||  |||||||||||    
T  147330 tgtcactttcaaagttcaatgcaacattaaatgttgttttatcaatattacccttagatatttattgt 147263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 23504 - 23467
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagta 223  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  23504 tctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 23876 - 23916
Alignment:
Q  186 tctccaaaatggacatgtattttaaaacggaaggagtaata 226  Q
    |||| |||||||||||||||||| ||||||| |||||||||    
T  23876 tctctaaaatggacatgtattttgaaacggatggagtaata 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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