View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1499_low_39 (Length: 293)

Name: NF1499_low_39
Description: NF1499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1499_low_39
NF1499_low_39
[»] chr1 (69 HSPs)
chr1 (79-285)||(46812745-46812951)
chr1 (35-81)||(23392615-23392661)
chr1 (35-81)||(37255142-37255188)
chr1 (35-81)||(39181065-39181111)
chr1 (34-75)||(42835611-42835652)
chr1 (34-81)||(2091823-2091870)
chr1 (34-81)||(47011321-47011368)
chr1 (34-81)||(52253554-52253601)
chr1 (35-81)||(5852704-5852750)
chr1 (35-81)||(6763412-6763458)
chr1 (35-81)||(17988238-17988284)
chr1 (35-81)||(24478743-24478789)
chr1 (35-81)||(25378273-25378319)
chr1 (35-81)||(26660660-26660706)
chr1 (35-81)||(27549123-27549169)
chr1 (35-81)||(31909765-31909811)
chr1 (35-81)||(33324123-33324169)
chr1 (35-81)||(39181129-39181175)
chr1 (35-81)||(40341808-40341854)
chr1 (35-81)||(45239007-45239053)
chr1 (35-81)||(46518023-46518069)
chr1 (35-81)||(48376883-48376929)
chr1 (35-81)||(48605086-48605132)
chr1 (35-81)||(52222301-52222347)
chr1 (1-34)||(15055030-15055063)
chr1 (36-81)||(21909920-21909965)
chr1 (36-81)||(40328951-40328996)
chr1 (8-81)||(43147463-43147536)
chr1 (30-81)||(3160766-3160817)
chr1 (1-36)||(3606293-3606328)
chr1 (1-36)||(12062226-12062261)
chr1 (38-81)||(15013673-15013716)
chr1 (1-36)||(21852469-21852504)
chr1 (1-36)||(39181081-39181116)
chr1 (1-36)||(47293282-47293317)
chr1 (34-81)||(48605147-48605194)
chr1 (35-81)||(3606277-3606323)
chr1 (35-81)||(8751448-8751494)
chr1 (35-81)||(8751510-8751556)
chr1 (35-81)||(12993629-12993675)
chr1 (35-81)||(15998227-15998273)
chr1 (35-81)||(25378335-25378381)
chr1 (35-81)||(26660722-26660768)
chr1 (35-81)||(31909827-31909873)
chr1 (35-81)||(34061959-34062005)
chr1 (35-81)||(34062021-34062067)
chr1 (35-81)||(37255204-37255250)
chr1 (35-81)||(38824369-38824415)
chr1 (35-81)||(42914614-42914660)
chr1 (35-81)||(47293351-47293397)
chr1 (35-81)||(49363462-49363508)
chr1 (39-81)||(49753103-49753145)
chr1 (35-81)||(50144217-50144263)
chr1 (35-80)||(3140961-3141006)
chr1 (36-81)||(7230025-7230070)
chr1 (4-81)||(33852920-33852997)
chr1 (4-81)||(33927921-33927998)
chr1 (1-33)||(4602720-4602752)
chr1 (35-87)||(5852766-5852818)
chr1 (38-81)||(8426809-8426853)
chr1 (37-81)||(27552310-27552354)
chr1 (35-75)||(28237094-28237134)
chr1 (6-34)||(28978530-28978558)
chr1 (1-33)||(37255158-37255190)
chr1 (1-33)||(38824367-38824399)
chr1 (35-87)||(46517955-46518007)
chr1 (1-33)||(47011276-47011308)
chr1 (34-86)||(47599918-47599970)
chr1 (1-33)||(48376881-48376913)
[»] chr5 (87 HSPs)
chr5 (1-81)||(19784550-19784631)
chr5 (1-81)||(19784566-19784647)
chr5 (8-81)||(15385834-15385911)
chr5 (8-81)||(15385857-15385934)
chr5 (5-81)||(18841976-18842052)
chr5 (34-81)||(7581401-7581448)
chr5 (1-81)||(29807110-29807200)
chr5 (35-81)||(29807094-29807140)
chr5 (35-81)||(35969057-35969103)
chr5 (35-81)||(39126092-39126138)
chr5 (35-81)||(39916363-39916409)
chr5 (1-77)||(8409651-8409734)
chr5 (36-81)||(20361993-20362038)
chr5 (36-81)||(37554426-37554471)
chr5 (36-81)||(37685049-37685094)
chr5 (12-81)||(35245607-35245682)
chr5 (35-81)||(12165299-12165346)
chr5 (34-81)||(14416483-14416530)
chr5 (1-81)||(14571024-14571116)
chr5 (1-81)||(20207193-20207275)
chr5 (35-81)||(7336933-7336979)
chr5 (35-81)||(9984937-9984983)
chr5 (35-81)||(14416422-14416468)
chr5 (35-81)||(15966034-15966080)
chr5 (35-81)||(20367324-20367370)
chr5 (35-81)||(22584310-22584356)
chr5 (35-81)||(24433551-24433597)
chr5 (35-81)||(26168266-26168312)
chr5 (35-81)||(33696733-33696779)
chr5 (35-81)||(35245686-35245732)
chr5 (35-81)||(43340493-43340539)
chr5 (1-81)||(8409635-8409722)
chr5 (36-81)||(35067935-35067980)
chr5 (36-81)||(39916301-39916346)
chr5 (38-81)||(3161307-3161350)
chr5 (34-81)||(8694499-8694546)
chr5 (34-81)||(11784363-11784410)
chr5 (34-81)||(14064887-14064934)
chr5 (1-65)||(20207193-20207259)
chr5 (34-81)||(21152604-21152651)
chr5 (34-81)||(21159739-21159786)
chr5 (34-81)||(21163546-21163593)
chr5 (38-81)||(30489112-30489155)
chr5 (35-78)||(31787237-31787280)
chr5 (34-81)||(31787295-31787342)
chr5 (7-75)||(33696658-33696728)
chr5 (1-36)||(34102148-34102183)
chr5 (34-81)||(34148017-34148064)
chr5 (1-81)||(34399597-34399679)
chr5 (1-36)||(36329112-36329147)
chr5 (34-81)||(36441170-36441217)
chr5 (1-36)||(39126087-39126122)
chr5 (35-81)||(1723259-1723305)
chr5 (35-81)||(14064826-14064872)
chr5 (35-81)||(14642094-14642140)
chr5 (35-81)||(15965972-15966018)
chr5 (35-81)||(18942064-18942110)
chr5 (35-81)||(21163608-21163654)
chr5 (35-81)||(23042040-23042086)
chr5 (35-81)||(25257085-25257131)
chr5 (35-81)||(25320875-25320921)
chr5 (35-81)||(37684986-37685032)
chr5 (35-81)||(39602982-39603028)
chr5 (1-75)||(43506139-43506212)
chr5 (35-81)||(43585511-43585557)
chr5 (35-81)||(43585573-43585619)
chr5 (35-84)||(3161239-3161288)
chr5 (44-81)||(6638246-6638283)
chr5 (38-75)||(8409744-8409781)
chr5 (36-81)||(9004963-9005008)
chr5 (1-34)||(12442840-12442873)
chr5 (36-81)||(27990436-27990481)
chr5 (36-81)||(36137031-36137076)
chr5 (34-71)||(43446885-43446922)
chr5 (45-81)||(1723331-1723367)
chr5 (38-78)||(6638283-6638323)
chr5 (37-81)||(9247042-9247086)
chr5 (36-72)||(12295755-12295791)
chr5 (1-33)||(14416438-14416470)
chr5 (1-33)||(14571040-14571072)
chr5 (1-33)||(20367340-20367372)
chr5 (45-81)||(23118237-23118273)
chr5 (1-33)||(25713774-25713806)
chr5 (35-87)||(26168198-26168250)
chr5 (1-33)||(30489172-30489204)
chr5 (35-75)||(31947472-31947512)
chr5 (35-75)||(42487376-42487416)
[»] chr8 (47 HSPs)
chr8 (8-81)||(5039024-5039097)
chr8 (1-81)||(17911379-17911459)
chr8 (35-87)||(7256897-7256949)
chr8 (1-81)||(17911395-17911475)
chr8 (35-81)||(32484957-32485003)
chr8 (35-81)||(34194576-34194622)
chr8 (35-81)||(40716762-40716808)
chr8 (35-81)||(42631795-42631841)
chr8 (8-81)||(17116493-17116566)
chr8 (34-81)||(11302020-11302067)
chr8 (34-81)||(11302967-11303014)
chr8 (1-81)||(43483964-43484056)
chr8 (35-81)||(32480274-32480320)
chr8 (35-81)||(37922828-37922874)
chr8 (35-81)||(37922890-37922936)
chr8 (35-81)||(43483948-43483994)
chr8 (8-81)||(5039001-5039074)
chr8 (8-81)||(17116516-17116589)
chr8 (36-81)||(34194639-34194684)
chr8 (36-81)||(35969741-35969786)
chr8 (36-81)||(38884025-38884070)
chr8 (35-75)||(42835700-42835740)
chr8 (34-81)||(9578454-9578501)
chr8 (38-81)||(35447800-35447843)
chr8 (1-36)||(44838847-44838882)
chr8 (35-81)||(1875704-1875750)
chr8 (35-81)||(8568836-8568882)
chr8 (35-81)||(26489621-26489667)
chr8 (35-81)||(27781962-27782008)
chr8 (35-81)||(29730703-29730749)
chr8 (35-81)||(32241764-32241810)
chr8 (35-81)||(32480204-32480250)
chr8 (35-81)||(35063538-35063584)
chr8 (35-81)||(38883962-38884008)
chr8 (35-81)||(39655433-39655479)
chr8 (35-81)||(40716824-40716870)
chr8 (35-81)||(40802219-40802265)
chr8 (35-81)||(44282343-44282389)
chr8 (7-36)||(13832081-13832110)
chr8 (34-75)||(29110340-29110381)
chr8 (1-34)||(42631811-42631844)
chr8 (1-38)||(44282336-44282373)
chr8 (1-33)||(5040100-5040132)
chr8 (35-75)||(34188396-34188436)
chr8 (1-33)||(34194592-34194624)
chr8 (12-68)||(36662632-36662688)
chr8 (1-33)||(40716778-40716810)
[»] chr3 (72 HSPs)
chr3 (1-81)||(8126146-8126238)
chr3 (1-75)||(1453418-1453492)
chr3 (35-81)||(35760817-35760863)
chr3 (36-81)||(12569181-12569226)
chr3 (36-81)||(13545645-13545690)
chr3 (35-81)||(5790665-5790711)
chr3 (35-81)||(24599895-24599941)
chr3 (35-81)||(34205641-34205687)
chr3 (35-81)||(42595815-42595861)
chr3 (35-81)||(46151038-46151084)
chr3 (38-81)||(43898109-43898152)
chr3 (8-75)||(50603547-50603614)
chr3 (35-81)||(22995712-22995758)
chr3 (35-81)||(26770799-26770845)
chr3 (35-81)||(32589331-32589377)
chr3 (35-81)||(34935554-34935600)
chr3 (34-84)||(34935615-34935665)
chr3 (35-81)||(51256645-51256691)
chr3 (35-81)||(53717975-53718021)
chr3 (1-81)||(17940204-17940287)
chr3 (1-81)||(17940220-17940303)
chr3 (35-80)||(18480893-18480938)
chr3 (45-81)||(5326836-5326872)
chr3 (35-79)||(16127766-16127810)
chr3 (34-81)||(1044000-1044047)
chr3 (34-81)||(7933595-7933642)
chr3 (34-81)||(29352744-29352791)
chr3 (1-36)||(32589347-32589382)
chr3 (34-81)||(34205579-34205626)
chr3 (34-81)||(40504143-40504190)
chr3 (34-81)||(46739384-46739431)
chr3 (34-81)||(51204499-51204546)
chr3 (35-82)||(52638111-52638158)
chr3 (35-81)||(5790727-5790773)
chr3 (35-81)||(16127826-16127872)
chr3 (35-81)||(17072619-17072665)
chr3 (35-81)||(19678978-19679024)
chr3 (35-81)||(22995774-22995820)
chr3 (35-81)||(24599957-24600003)
chr3 (39-81)||(26043266-26043308)
chr3 (35-81)||(29076603-29076649)
chr3 (35-81)||(32827444-32827490)
chr3 (35-81)||(44435190-44435236)
chr3 (35-81)||(44435252-44435298)
chr3 (35-81)||(47342660-47342706)
chr3 (35-81)||(47900265-47900311)
chr3 (35-81)||(49562051-49562097)
chr3 (39-81)||(50623118-50623160)
chr3 (36-81)||(7672772-7672817)
chr3 (36-81)||(19679041-19679086)
chr3 (38-71)||(22153140-22153173)
chr3 (36-81)||(32833696-32833741)
chr3 (34-71)||(38455242-38455279)
chr3 (1-58)||(50603557-50603614)
chr3 (36-81)||(51256583-51256628)
chr3 (36-81)||(54680568-54680613)
chr3 (24-68)||(105401-105445)
chr3 (45-81)||(7672709-7672745)
chr3 (34-66)||(13083948-13083980)
chr3 (1-33)||(13084121-13084153)
chr3 (1-33)||(21659214-21659246)
chr3 (1-33)||(29076601-29076633)
chr3 (1-33)||(29720225-29720257)
chr3 (39-75)||(39289643-39289679)
chr3 (1-33)||(42595813-42595845)
chr3 (1-33)||(43159342-43159374)
chr3 (34-66)||(43906796-43906828)
chr3 (38-78)||(46739326-46739366)
chr3 (8-36)||(47915252-47915280)
chr3 (1-33)||(51486458-51486490)
chr3 (35-71)||(52168309-52168345)
chr3 (1-33)||(52638109-52638141)
[»] chr7 (68 HSPs)
chr7 (36-82)||(12171674-12171720)
chr7 (3-81)||(43232911-43232989)
chr7 (1-66)||(5212086-5212151)
chr7 (1-81)||(43232893-43232973)
chr7 (34-81)||(48392882-48392929)
chr7 (35-81)||(3498310-3498356)
chr7 (35-81)||(9503974-9504020)
chr7 (35-81)||(24211567-24211613)
chr7 (38-84)||(27942338-27942384)
chr7 (35-81)||(46658810-46658856)
chr7 (34-81)||(27940822-27940869)
chr7 (34-81)||(28003255-28003302)
chr7 (35-81)||(7344976-7345022)
chr7 (35-81)||(19531969-19532015)
chr7 (35-81)||(20353073-20353119)
chr7 (35-81)||(33471506-33471552)
chr7 (35-81)||(37066198-37066244)
chr7 (35-81)||(37066260-37066306)
chr7 (35-81)||(38391895-38391941)
chr7 (39-81)||(45833272-45833314)
chr7 (35-81)||(46221156-46221202)
chr7 (35-81)||(46477149-46477195)
chr7 (1-81)||(7344923-7345006)
chr7 (8-81)||(9140200-9140272)
chr7 (36-81)||(18941390-18941435)
chr7 (36-81)||(19532032-19532077)
chr7 (36-81)||(20353156-20353201)
chr7 (36-81)||(46578344-46578389)
chr7 (36-81)||(46658748-46658793)
chr7 (1-81)||(5212087-5212167)
chr7 (35-75)||(21387654-21387694)
chr7 (1-81)||(31669811-31669891)
chr7 (25-81)||(31857138-31857194)
chr7 (1-33)||(46470984-46471016)
chr7 (1-81)||(3498326-3498418)
chr7 (38-81)||(23092370-23092413)
chr7 (1-36)||(27234931-27234966)
chr7 (1-36)||(33471522-33471557)
chr7 (35-81)||(5691554-5691600)
chr7 (35-81)||(8379153-8379199)
chr7 (35-81)||(11032319-11032365)
chr7 (35-81)||(11032381-11032427)
chr7 (35-81)||(13846726-13846772)
chr7 (35-81)||(17882786-17882832)
chr7 (39-81)||(27234874-27234916)
chr7 (35-81)||(27940761-27940807)
chr7 (35-81)||(27942403-27942449)
chr7 (35-81)||(28003194-28003240)
chr7 (2-81)||(31671016-31671091)
chr7 (35-81)||(33784076-33784122)
chr7 (35-81)||(36711555-36711601)
chr7 (35-81)||(39728644-39728690)
chr7 (35-81)||(43067040-43067086)
chr7 (35-81)||(43093495-43093541)
chr7 (35-81)||(45833206-45833252)
chr7 (35-81)||(46471030-46471076)
chr7 (35-81)||(46477211-46477257)
chr7 (35-81)||(48392944-48392990)
chr7 (35-81)||(48590601-48590647)
chr7 (36-81)||(31601264-31601309)
chr7 (35-80)||(46578282-46578327)
chr7 (1-81)||(46774546-46774623)
chr7 (36-81)||(48135482-48135527)
chr7 (45-81)||(18941350-18941386)
chr7 (37-81)||(23092434-23092478)
chr7 (8-36)||(24166302-24166330)
chr7 (35-79)||(31365646-31365690)
chr7 (8-36)||(40069441-40069469)
[»] chr4 (84 HSPs)
chr4 (35-81)||(13743874-13743920)
chr4 (1-81)||(17659481-17659573)
chr4 (1-81)||(26206626-26206718)
chr4 (35-81)||(25856026-25856072)
chr4 (35-81)||(46779372-46779418)
chr4 (35-81)||(50038466-50038512)
chr4 (35-81)||(50045688-50045734)
chr4 (36-81)||(24331441-24331486)
chr4 (38-81)||(37306847-37306890)
chr4 (1-81)||(44639762-44639854)
chr4 (35-81)||(11511746-11511792)
chr4 (35-81)||(12721661-12721707)
chr4 (35-81)||(12721724-12721770)
chr4 (35-81)||(13743936-13743982)
chr4 (35-81)||(15185903-15185949)
chr4 (35-81)||(17659543-17659589)
chr4 (35-81)||(25856088-25856134)
chr4 (35-81)||(30051421-30051467)
chr4 (35-81)||(30279218-30279264)
chr4 (35-81)||(43635852-43635898)
chr4 (35-81)||(44639824-44639870)
chr4 (35-81)||(48079532-48079578)
chr4 (35-81)||(49573895-49573941)
chr4 (35-81)||(51126121-51126167)
chr4 (35-81)||(51126183-51126229)
chr4 (35-81)||(53176689-53176735)
chr4 (36-81)||(11583786-11583831)
chr4 (36-81)||(56420510-56420555)
chr4 (35-75)||(5289724-5289764)
chr4 (37-81)||(15133914-15133958)
chr4 (1-33)||(19754247-19754279)
chr4 (1-33)||(19785527-19785559)
chr4 (35-79)||(55501220-55501264)
chr4 (34-81)||(15133843-15133890)
chr4 (1-36)||(30162684-30162719)
chr4 (1-36)||(34459058-34459093)
chr4 (34-81)||(39017526-39017573)
chr4 (1-81)||(43635868-43635960)
chr4 (34-81)||(45890938-45890985)
chr4 (1-81)||(50038482-50038574)
chr4 (1-81)||(50045704-50045796)
chr4 (34-81)||(52256819-52256866)
chr4 (35-81)||(9052009-9052055)
chr4 (35-81)||(9968317-9968363)
chr4 (35-81)||(17028311-17028357)
chr4 (35-81)||(19754231-19754277)
chr4 (35-81)||(19785529-19785575)
chr4 (35-81)||(23329386-23329432)
chr4 (35-81)||(23710851-23710897)
chr4 (35-81)||(23754270-23754316)
chr4 (35-81)||(29978508-29978554)
chr4 (35-81)||(30162627-30162673)
chr4 (35-81)||(34709591-34709637)
chr4 (35-81)||(34827550-34827596)
chr4 (35-81)||(38224015-38224061)
chr4 (35-81)||(38938057-38938103)
chr4 (35-81)||(41788937-41788983)
chr4 (35-81)||(42013162-42013208)
chr4 (35-81)||(48042607-48042653)
chr4 (35-81)||(49745541-49745587)
chr4 (35-81)||(50519340-50519386)
chr4 (35-81)||(51975202-51975248)
chr4 (35-81)||(53508516-53508562)
chr4 (35-81)||(55131614-55131660)
chr4 (35-81)||(55501280-55501326)
chr4 (36-81)||(5048451-5048496)
chr4 (35-68)||(33520619-33520652)
chr4 (1-34)||(34827547-34827580)
chr4 (1-34)||(37381126-37381159)
chr4 (36-81)||(39754115-39754160)
chr4 (34-75)||(42184716-42184757)
chr4 (36-81)||(46996553-46996598)
chr4 (36-81)||(48042670-48042715)
chr4 (36-81)||(48079595-48079640)
chr4 (34-75)||(48995578-48995619)
chr4 (1-33)||(5289734-5289766)
chr4 (36-68)||(13689615-13689647)
chr4 (1-33)||(20598333-20598365)
chr4 (35-75)||(23710913-23710953)
chr4 (1-33)||(23754268-23754300)
chr4 (1-72)||(37306891-37306960)
chr4 (1-33)||(39294205-39294237)
chr4 (45-81)||(39754187-39754223)
chr4 (45-81)||(50533142-50533178)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-81)||(30433-30514)
[»] chr6 (26 HSPs)
chr6 (1-66)||(7246915-7246980)
chr6 (1-81)||(11989162-11989250)
chr6 (1-65)||(7246915-7246979)
chr6 (1-81)||(11989178-11989266)
chr6 (35-81)||(7418891-7418937)
chr6 (35-81)||(10731551-10731597)
chr6 (35-81)||(32786132-32786178)
chr6 (35-81)||(32786194-32786240)
chr6 (36-81)||(19687483-19687528)
chr6 (36-81)||(31577455-31577500)
chr6 (1-36)||(6048029-6048064)
chr6 (34-81)||(10731489-10731536)
chr6 (34-81)||(15467589-15467636)
chr6 (34-81)||(17854852-17854899)
chr6 (1-36)||(21478585-21478620)
chr6 (35-81)||(1858293-1858339)
chr6 (35-81)||(3418834-3418880)
chr6 (35-81)||(9908152-9908198)
chr6 (35-77)||(19687545-19687587)
chr6 (35-81)||(26295390-26295436)
chr6 (35-81)||(26498671-26498717)
chr6 (35-81)||(28648483-28648529)
chr6 (1-38)||(8029428-8029465)
chr6 (36-81)||(17181370-17181415)
chr6 (34-81)||(6047971-6048019)
chr6 (35-75)||(27082451-27082491)
[»] scaffold0340 (2 HSPs)
scaffold0340 (38-85)||(14045-14092)
scaffold0340 (36-81)||(14112-14157)
[»] scaffold1786 (1 HSPs)
scaffold1786 (35-81)||(526-572)
[»] chr2 (70 HSPs)
chr2 (35-81)||(5204908-5204954)
chr2 (35-81)||(8554687-8554733)
chr2 (35-81)||(25668489-25668535)
chr2 (35-81)||(26269371-26269417)
chr2 (36-81)||(604873-604918)
chr2 (1-81)||(38262024-38262109)
chr2 (34-81)||(4898181-4898228)
chr2 (34-81)||(4945575-4945622)
chr2 (34-81)||(20195305-20195352)
chr2 (34-81)||(29771734-29771781)
chr2 (1-81)||(36490511-36490603)
chr2 (35-81)||(2795388-2795434)
chr2 (35-81)||(5144284-5144330)
chr2 (35-81)||(9157990-9158036)
chr2 (35-81)||(10041558-10041604)
chr2 (35-81)||(10099568-10099614)
chr2 (35-81)||(20128760-20128806)
chr2 (35-81)||(24971221-24971267)
chr2 (35-81)||(26567652-26567698)
chr2 (35-81)||(32473487-32473533)
chr2 (35-81)||(34911176-34911222)
chr2 (35-81)||(37486077-37486123)
chr2 (35-81)||(40340547-40340593)
chr2 (35-81)||(42579097-42579143)
chr2 (35-81)||(45123873-45123919)
chr2 (36-81)||(24971284-24971329)
chr2 (35-80)||(29712564-29712609)
chr2 (1-81)||(31211751-31211821)
chr2 (1-75)||(42579041-42579127)
chr2 (35-75)||(5144346-5144386)
chr2 (35-75)||(27743694-27743734)
chr2 (8-81)||(41145280-41145361)
chr2 (38-81)||(17843967-17844010)
chr2 (1-36)||(32473503-32473538)
chr2 (38-81)||(43514837-43514880)
chr2 (35-81)||(5094918-5094964)
chr2 (35-81)||(5580266-5580312)
chr2 (35-81)||(9709674-9709720)
chr2 (35-81)||(17844029-17844075)
chr2 (35-81)||(20195367-20195413)
chr2 (35-81)||(27327846-27327892)
chr2 (35-81)||(28680917-28680963)
chr2 (35-81)||(29771796-29771842)
chr2 (35-81)||(30905140-30905186)
chr2 (35-81)||(32070539-32070585)
chr2 (1-81)||(35607431-35607508)
chr2 (1-81)||(35607447-35607524)
chr2 (35-81)||(37485988-37486034)
chr2 (35-81)||(40739508-40739554)
chr2 (35-81)||(43514772-43514818)
chr2 (36-81)||(324812-324857)
chr2 (1-34)||(4637082-4637115)
chr2 (1-34)||(5580282-5580315)
chr2 (1-34)||(6096345-6096378)
chr2 (36-81)||(7993113-7993158)
chr2 (34-75)||(9436497-9436538)
chr2 (1-81)||(12017775-12017860)
chr2 (1-38)||(18461444-18461481)
chr2 (36-81)||(26567715-26567760)
chr2 (1-34)||(27743691-27743724)
chr2 (36-81)||(33150091-33150136)
chr2 (36-81)||(34466114-34466159)
chr2 (1-33)||(8554703-8554735)
chr2 (1-33)||(10099628-10099660)
chr2 (1-65)||(14308691-14308754)
chr2 (1-65)||(14308691-14308754)
chr2 (1-33)||(28680915-28680947)
chr2 (1-33)||(30902349-30902381)
chr2 (1-33)||(40739524-40739556)
chr2 (1-81)||(42792698-42792778)
[»] scaffold0224 (1 HSPs)
scaffold0224 (34-75)||(22692-22733)
[»] scaffold0635 (1 HSPs)
scaffold0635 (35-81)||(5466-5512)
[»] scaffold0111 (1 HSPs)
scaffold0111 (35-81)||(38085-38131)
[»] scaffold0011 (1 HSPs)
scaffold0011 (35-81)||(257-303)
[»] scaffold0531 (2 HSPs)
scaffold0531 (1-38)||(7038-7075)
scaffold0531 (35-81)||(7022-7068)
[»] scaffold0223 (1 HSPs)
scaffold0223 (35-81)||(26655-26701)
[»] scaffold0047 (2 HSPs)
scaffold0047 (35-81)||(65936-65982)
scaffold0047 (45-81)||(63526-63562)
[»] scaffold0019 (1 HSPs)
scaffold0019 (45-75)||(45613-45643)
[»] scaffold0013 (1 HSPs)
scaffold0013 (35-81)||(58378-58424)
[»] scaffold0622 (1 HSPs)
scaffold0622 (36-81)||(364-409)
[»] scaffold0305 (1 HSPs)
scaffold0305 (5-81)||(16837-16910)
[»] scaffold0287 (1 HSPs)
scaffold0287 (53-81)||(1851-1879)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-33)||(13727-13759)


Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 79 - 285
Target Start/End: Complemental strand, 46812951 - 46812745
Alignment:
Q  79 tatttttcagtgtcgacaacgggaaggaggcacggttcatttggatctccagcaagttctcccggccaagcacccaaatttgatcatatgcgaccaaaaa 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46812951 tatttttcagtgtcgacaacgggaaggaggcacggttcatttggatctccagcaagttctcccggccaagcacccaaatttgatcatatgcgaccaaaaa 46812852  T
Q  179 tggaaaactgggcaagttctcctcgccaagcacccaaaattgatcatatgcaaccaaaaatggaggccttgacaatttctcctcgccgagcacccaaagg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46812851 tggaaaactgggcaagttctcctcgccaagcacccaaaattgatcatatgcaaccaaaaatggaggccttgacaatttctcctcgccgagcacccaaagg 46812752  T
Q  279 tgatgat 285  Q
    |||||||    
T  46812751 tgatgat 46812745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23392615 - 23392661
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||    
T  23392615 cacatacatcaataattaaatgaatctaaaaagtaaaatttgcttat 23392661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 37255188 - 37255142
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  37255188 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 37255142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 39181111 - 39181065
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  39181111 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 39181065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 42835652 - 42835611
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  42835652 tcacatacattattaattaaatgaatctaaaaaataaaattt 42835611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 2091823 - 2091870
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  2091823 tcacatacatgattaattgaatgaacctaaaaagtaaaatttgcttat 2091870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 47011321 - 47011368
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  47011321 tcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 47011368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 52253601 - 52253554
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  52253601 tcacatacatcattaattgaatgaatataaaaagtaaaatttgcttat 52253554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 5852750 - 5852704
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  5852750 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 5852704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 6763412 - 6763458
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  6763412 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 6763458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 17988284 - 17988238
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  17988284 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 17988238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 24478743 - 24478789
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  24478743 cacatacatcattaattaaatgaacttaaaaagtaaaatttgcttat 24478789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25378319 - 25378273
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  25378319 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 25378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 26660706 - 26660660
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  26660706 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 26660660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 27549123 - 27549169
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  27549123 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 27549169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 31909811 - 31909765
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  31909811 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 31909765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 33324123 - 33324169
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||    
T  33324123 cacatacattattaattgaataaacctaaaaagtaaaatttgcttat 33324169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 39181129 - 39181175
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  39181129 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 39181175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 40341808 - 40341854
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  40341808 cacatacatcattaattaaatgaatctataaagtaaaatttgtttat 40341854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 45239053 - 45239007
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  45239053 cacatacatcattgattaaatgaatctaaaaagtaaaatttacttat 45239007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 46518023 - 46518069
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  46518023 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 46518069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 48376883 - 48376929
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||    
T  48376883 cacatatattattaattgaatgaatctaaaaagtcaaatttgcttat 48376929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 48605132 - 48605086
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  48605132 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 48605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 52222301 - 52222347
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  52222301 cacatacatcattaattacatgaacctaaaaagtaaaatttgcttat 52222347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15055063 - 15055030
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  15055063 ttttagattcattcaattaatgatatatgtggtt 15055030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 21909920 - 21909965
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  21909920 acatacatcattaattgaataaatctaaaaagtaaaatttgcttat 21909965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 40328951 - 40328996
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  40328951 acatacatcattaattgaatgaatctaaaaagtaaaatttgtttat 40328996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 43147536 - 43147463
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| |||||||| |||||||| || |||||| ||||| | |||||| |||||||||||| |||| ||||    
T  43147536 ttcattcatttaatgatgtatgtggtccatatacatcattaaatgaatgaacctaaaaagtaaattttgtttat 43147463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 3160817 - 3160766
Alignment:
Q  30 tggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||| ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  3160817 tggtccacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 3160766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 3606293 - 3606328
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3606293 ttttagattcattcaattaatgatgtatgtggttca 3606328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12062226 - 12062261
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  12062226 ttttaggttcattcaattaatgatatatgtggttca 12062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 15013716 - 15013673
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||| |||||||||||||||| |||||| |||||    
T  15013716 atacattattaattgaatgaatctaaaaagtcaaatttacttat 15013673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 21852469 - 21852504
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  21852469 ttttaggttcattcaattaatgatatatgtggttca 21852504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 39181081 - 39181116
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  39181081 ttttagattcattcaattaatgatgtatgtggttca 39181116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 47293282 - 47293317
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  47293282 ttttagattcattcaattaatgatgtatgtggttca 47293317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 48605147 - 48605194
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  48605147 tcacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 48605194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 3606323 - 3606277
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||| || |||||||||    
T  3606323 cacatacatcattaattgaatgaatctaaaaagtcaattttgcttat 3606277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 8751494 - 8751448
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  8751494 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 8751448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 8751510 - 8751556
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  8751510 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 8751556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 12993629 - 12993675
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  12993629 cacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 12993675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15998273 - 15998227
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||| | ||||||||||||||||||| |||||||||    
T  15998273 cacatacatcattaaatgaatgaatctaaaaagtaaattttgcttat 15998227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 25378335 - 25378381
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  25378335 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 25378381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26660722 - 26660768
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||  |||||| |||||| ||||||||||||||||||||||    
T  26660722 cacatacatctttaattcaatgaacctaaaaagtaaaatttgcttat 26660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 31909827 - 31909873
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  31909827 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 31909873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 34062005 - 34061959
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  34062005 cacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 34061959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 34062021 - 34062067
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  34062021 cacatacatcattaattgaatgaacctaaaaagtgaaatttgcttat 34062067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 37255204 - 37255250
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||    
T  37255204 cacatacatcattaattgaatgaacctaaaaagtaatatttgcttat 37255250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38824369 - 38824415
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  38824369 cacatacatcattaattgaatgaatctaaaacgtaaaatttgtttat 38824415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 42914614 - 42914660
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||| |||||||||||||||||| || |||||||||    
T  42914614 cacatacatcattaaataaatgaatctaaaaagtgaattttgcttat 42914660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 47293351 - 47293397
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||  |||||||||||||||| ||||||||||||    
T  47293351 cacatacataattaatcgaatgaatctaaaaagttaaatttgcttat 47293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 49363462 - 49363508
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| || |||| |||||| ||||||||||||||||||||||    
T  49363462 cacatacatcatcaattgaatgaacctaaaaagtaaaatttgcttat 49363508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 49753145 - 49753103
Alignment:
Q  39 tacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| |||||||||||||| |||||||||||||||| |||||    
T  49753145 tacatcattaattaaatgaacctaaaaagtaaaatttacttat 49753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 50144217 - 50144263
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||    
T  50144217 cacatatattattaattaaatgaacctaaaagttaaaatttgcttat 50144263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 3141006 - 3140961
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctta 80  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||    
T  3141006 cacatacatcattaattaaatgaacctaaaaattaaaatttactta 3140961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 7230070 - 7230025
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||||| || |||||||||    
T  7230070 acatacatcattaattgaatgaatctaaaaagttaattttgcttat 7230025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 33852997 - 33852920
Alignment:
Q  4 tagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||| |||||||| ||||||   ||||||||| ||||| | |||||| ||| ||||| || |||||||||    
T  33852997 tagattcattcatttaatgatgtatgtgacccacatacatcattaaatgaatgaacctataaagtcaattttgcttat 33852920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 33927921 - 33927998
Alignment:
Q  4 tagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||| |||||||| ||||||   ||||||||| ||||| | |||||| ||| ||||| || |||||||||    
T  33927921 tagattcattcatttaatgatgtatgtgacccacatacatcattaaatgaatgaacctataaagtcaattttgcttat 33927998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4602752 - 4602720
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  4602752 ttttagatacattcaattaatgatatatgtggt 4602720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 5852766 - 5852818
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttttca 87  Q
    ||||||||| |||| || |||| | |||||||||||||||||||||| |||||    
T  5852766 cacatacatcattagttgaatgtacctaaaaagtaaaatttgcttatatttca 5852818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 8426809 - 8426853
Alignment:
Q  38 atacattattaattaaatgaatctaaaaag-taaaatttgcttat 81  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||    
T  8426809 atacatcattaattaaatgaatctaaaaagttaaaatttacttat 8426853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 27552310 - 27552354
Alignment:
Q  37 catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  27552310 catacatcattaattgaatgaacctaaaaactaaaatttgcttat 27552354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 28237134 - 28237094
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| |||||| ||||||||||||||||| ||||||    
T  28237134 cacatacatcattaataaaatgaatctaaaaagtcaaattt 28237094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 28978558 - 28978530
Alignment:
Q  6 gattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||||||||    
T  28978558 gattcattcaattaatgatatatgtggtt 28978530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37255158 - 37255190
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  37255158 ttttagattcattcaattaatgatgtatgtggt 37255190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38824399 - 38824367
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  38824399 ttttagattcattcaattaatgatgtatgtggt 38824367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 46518007 - 46517955
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttttca 87  Q
    ||||||||| |||| || |||| | |||||||||||||||||||||| |||||    
T  46518007 cacatacatcattagttgaatgtacctaaaaagtaaaatttgcttatatttca 46517955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 47011276 - 47011308
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  47011276 ttttaggttcattcaattaatgatatatgtggt 47011308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 47599970 - 47599918
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttttc 86  Q
    |||||||||| ||||||| ||| ||| ||||||||| ||||||||||| ||||    
T  47599970 tcacatacatcattaattgaataaatttaaaaagtagaatttgcttatatttc 47599918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48376913 - 48376881
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||||||||||||||||||| |||||||||||    
T  48376913 ttttagattcattcaattaataatatatgtggt 48376881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19784631 - 19784550
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttc-acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||||| | |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  19784631 ttttaggttcattcaattaatgatgtatgtggtaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 19784550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19784566 - 19784647
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttc-acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||||| | |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  19784566 ttttaggttcattcaattaatgatgtatgtggtaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 19784647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 15385911 - 15385834
Alignment:
Q  8 ttcattcaattaatgatatatgtggtt----cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||||||    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  15385911 ttcattcaattaatgatgtatgtggtttaaccacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 15385834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 15385857 - 15385934
Alignment:
Q  8 ttcattcaattaatgatatatgtggtt----cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||||||    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  15385857 ttcattcaattaatgatgtatgtggttaaaccacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 15385934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 18842052 - 18841976
Alignment:
Q  5 agattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||| ||| |||| |||||||||||||||||| ||||| | ||||||||| |||||| || |||||||||    
T  18842052 agattcattcatttattgatgtatgtggttcacatacatcattaaatgaatgaatctgaaaagtcaattttgcttat 18841976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 7581448 - 7581401
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||    
T  7581448 tcacatacattattaaatgaatgaatctaaaaagtaaaatttgcttat 7581401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29807110 - 29807200
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt----------cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| ||||||||           ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  29807110 ttttagattcattcaattaatgatgtatgtggtctataatggaccacatacataattaattgaatgaatctaaaaagtaaaatttgcttat 29807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 29807140 - 29807094
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  29807140 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 29807094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 35969103 - 35969057
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  35969103 cacatacatcattaattaaatgaatctaaaaagtaaaatttgtttat 35969057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 39126092 - 39126138
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  39126092 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 39126138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 39916363 - 39916409
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39916363 cacatacattattaattgaatgaacctaaaaagtaaaatttgcttat 39916409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8409651 - 8409734
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca-------catacattattaattaaatgaatctaaaaagtaaaatttgc 77  Q
    |||||||||||||||||||||||||||| |||| ||       ||||||| ||||||| |||||| ||||||||||||||||||    
T  8409651 ttttagattcattcaattaatgatatatatggtccatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgc 8409734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 20362038 - 20361993
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  20362038 acatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 20361993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 37554426 - 37554471
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  37554426 acatacattattaattgaatgaatctaaaaaataaaatttgcttat 37554471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 37685049 - 37685094
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  37685049 acatacattattaattgaatgaatctaaaaaataaaatttgcttat 37685094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 35245682 - 35245607
Alignment:
Q  12 ttcaattaatgatatatgtggtt------cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||| |||||||||      ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  35245682 ttcaattaatgatgtatgtggttataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 35245607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 12165346 - 12165299
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagt-aaaatttgcttat 81  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  12165346 cacatacatcattaattaaatgaatctaaaaagtcaaaatttgcttat 12165299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 14416483 - 14416530
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||    
T  14416483 tcacatacatcattaattaaatgaacgtaaaaagtaaaatttgcttat 14416530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14571116 - 14571024
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| |||||||||||||| ||||||||||||||    
T  14571116 ttttagattcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaatctaaaaaataaaatttgcttat 14571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20207193 - 20207275
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt--tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| ||||||||   ||||| ||| ||||||| |||||||||||||| |||| ||| |||||    
T  20207193 ttttaggttcattcaattaatgatgtatgtggtccacacatgcatcattaattgaatgaatctaaaaaataaattttacttat 20207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 7336933 - 7336979
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  7336933 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 7336979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9984983 - 9984937
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  9984983 cacatacatcattaattaaatgaacctaaaaaataaaatttgcttat 9984937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14416468 - 14416422
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  14416468 cacatacatcattaattgaatgaatctaaaaaataaaatttgcttat 14416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15966034 - 15966080
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  15966034 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 15966080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20367370 - 20367324
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  20367370 cacatacatcattaattgaatgaatctaaaaagtaaaatttgtttat 20367324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 22584310 - 22584356
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  22584310 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 22584356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 24433597 - 24433551
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  24433597 cacatacatcattaattcaataaatctaaaaagtaaaatttgcttat 24433551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26168266 - 26168312
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  26168266 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 26168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 33696733 - 33696779
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  33696733 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 33696779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 35245686 - 35245732
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  35245686 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 35245732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 43340493 - 43340539
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||    
T  43340493 cacataaattattaattgaatgaacctaaaaagtaaaatttgcttat 43340539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8409722 - 8409635
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcac-------atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||||||||        ||| || ||||||| ||||||||||||||||||||||| |||||    
T  8409722 ttttaggttcattcaattaatgatgtatgtggttcatggaccatatatatcattaattgaatgaatctaaaaagtaaaatttacttat 8409635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 35067980 - 35067935
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  35067980 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 35067935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 39916346 - 39916301
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||    
T  39916346 acatacatcaataattaaatgaatctaaaaagtaaaatttacttat 39916301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 3161307 - 3161350
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||    
T  3161307 atacatcattaattgaatgaacctaaaaagtaaaatttgcttat 3161350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 8694546 - 8694499
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| | |||||||||||||||| || |||||||||    
T  8694546 tcacatacattattaaatgaatgaatctaaaaagtcaattttgcttat 8694499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 11784363 - 11784410
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  11784363 tcacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 11784410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 14064887 - 14064934
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  14064887 tcacatacatcattaattgaatgaatctaaaaagtaatttttgcttat 14064934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20207259 - 20207193
Alignment:
Q  1 ttttagattcattcaattaatgat--atatgtggttcacatacattattaattaaatgaatctaaaa 65  Q
    ||||||||||||||||||||||||  || |||||  ||||||||| ||||||| |||||| ||||||    
T  20207259 ttttagattcattcaattaatgatgcatgtgtggaccacatacatcattaattgaatgaacctaaaa 20207193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 21152651 - 21152604
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  21152651 tcacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 21152604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 21159786 - 21159739
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  21159786 tcacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 21159739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 21163593 - 21163546
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  21163593 tcacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 21163546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 30489155 - 30489112
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||    
T  30489155 atacataattaattaaatgaacctaaaaaataaaatttgcttat 30489112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 31787280 - 31787237
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgct 78  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||    
T  31787280 cacatacatcattaattgaatgaacctaaaaagtaaaatttgct 31787237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 31787295 - 31787342
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  31787295 tcacatacatcattaattgaatgaagctaaaaagtaaaatttacttat 31787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 33696728 - 33696658
Alignment:
Q  7 attcattcaattaatgatatatgtggttca--catacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||||||||||| || ||||| ||  ||||||| ||||||| ||| || ||||||||||||||||    
T  33696728 attcattcaattaatgatgtacgtggtccatacatacatcattaattgaataaacctaaaaagtaaaattt 33696658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34102183 - 34102148
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34102183 ttttagattcattcaattaatgatgtatgtggttca 34102148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 34148017 - 34148064
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| |||||||||||||| ||||||| |||||||| |||||    
T  34148017 tcacatacatcattaattaaatgaacctaaaaaataaaatttacttat 34148064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34399597 - 34399679
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca--catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||| |||||||| |||||| ||||  |||| |||||||| | |||||| |||||||||||| ||| |||||    
T  34399597 ttttaggttcattcatttaatgatgtatgtgattcatacatatattattaaatgaatgaacctaaaaagtaaattttacttat 34399679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 36329112 - 36329147
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  36329112 ttttaggttcattcaattaatgatatatgtggttca 36329147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 36441170 - 36441217
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||||||| ||||||||||||||| |||||    
T  36441170 tcacatacatcattaattgaatgaatttaaaaagtaaaatttacttat 36441217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 39126122 - 39126087
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  39126122 ttttagattcattcaattaatgatgtatgtggttca 39126087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 1723305 - 1723259
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||| | ||||||||||||    
T  1723305 cacatacatcattaattaaatgaacctaaaaaatcaaatttgcttat 1723259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 14064872 - 14064826
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  14064872 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 14064826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 14642094 - 14642140
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||||||||||   |||||||||||||    
T  14642094 cacatacattattaattgaatgaatctaaaattcaaaatttgcttat 14642140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 15966018 - 15965972
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  15966018 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 15965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 18942064 - 18942110
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  18942064 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 18942110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 21163608 - 21163654
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  21163608 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 21163654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23042040 - 23042086
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  23042040 cacatacatcattaattcaatgaacctaaaaagtaaattttgcttat 23042086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25257131 - 25257085
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  25257131 cacatacataattaattaaatgaatcttaaaagttaaatttgtttat 25257085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25320921 - 25320875
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||||| |||||| ||||||| ||||    
T  25320921 cacatacataattaattaaatgaatcttaaaagttaaatttgtttat 25320875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 37685032 - 37684986
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  37685032 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 37684986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 39602982 - 39603028
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||| || ||||||||||||||||||||||    
T  39602982 cacatacatcattaattgaataaacctaaaaagtaaaatttgcttat 39603028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43506139 - 43506212
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||||| ||| | |||||| |||||||| ||||||||| ||| | | |||||||||||||||| ||||||    
T  43506139 ttttagattcaatcattaaatgatgtatgtggt-cacatacatcatttaatgaatgaatctaaaaagtgaaattt 43506212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43585557 - 43585511
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  43585557 cacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 43585511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 43585573 - 43585619
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  43585573 cacatacatcattaattgaatgaacctaaaaagtaaattttgcttat 43585619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 3161288 - 3161239
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttt 84  Q
    |||||||||  |||||| |||||| ||||||||||||||||| |||||||    
T  3161288 cacatacatcgttaattgaatgaacctaaaaagtaaaatttgtttatttt 3161239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 6638283 - 6638246
Alignment:
Q  44 tattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  6638283 tattaattgaatgaacctaaaaagtaaaatttgcttat 6638246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 8409744 - 8409781
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  8409744 atacatcattaattgaatgaatctaaaaagtaaaattt 8409781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 9005008 - 9004963
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||||    
T  9005008 acatacatcattaattaaatgaatctaaaagttaaaatttgtttat 9004963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12442873 - 12442840
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  12442873 ttttagattcattcaattaatgatatatatggtt 12442840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 27990436 - 27990481
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  27990436 acatacatcattaattgaatgaacctaaaaagtgaaatttgcttat 27990481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 36137076 - 36137031
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  36137076 acatacatcattaattgaatgaatctaaaaagttaaatttgtttat 36137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 43446922 - 43446885
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaa 71  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  43446922 tcacatacatcattaattaaatgtatctaaaaagtaaa 43446885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 1723331 - 1723367
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  1723331 attaattgaatgaacctaaaaagtaaaatttgcttat 1723367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 6638323 - 6638283
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgct 78  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  6638323 atacatcattaattgaatgaacctaaaaagtaaaatttgct 6638283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 9247042 - 9247086
Alignment:
Q  37 catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  9247042 catacatcattaattgaatgaacctaaaaagtaaaatttgtttat 9247086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 12295755 - 12295791
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaa 72  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  12295755 acatacattatttattgaatgaatctaaaaagtaaaa 12295791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14416438 - 14416470
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14416438 ttttagattcattcaattaatgatgtatgtggt 14416470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14571040 - 14571072
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14571040 ttttagattcattcaattaatgatgtatgtggt 14571072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20367340 - 20367372
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  20367340 ttttagattcattcaattaatgatgtatgtggt 20367372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 23118237 - 23118273
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  23118237 attaattgaatgaaactaaaaagtaaaatttgcttat 23118273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25713806 - 25713774
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  25713806 ttttagattcattcaataaatgatatatgtggt 25713774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 26168250 - 26168198
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttttca 87  Q
    ||||||||| |||| || |||| | |||||||||||||||||||||| |||||    
T  26168250 cacatacatcattagttgaatgtacctaaaaagtaaaatttgcttatatttca 26168198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30489204 - 30489172
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  30489204 ttttaaattcattcaattaatgatatatgtggt 30489172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 31947512 - 31947472
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  31947512 cacatacataattaattgaatgaatctaaaaagtcaaattt 31947472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 42487416 - 42487376
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||||||||||||| |||||||| ||||||||    
T  42487416 cacatacatcattaattaaatgattctaaaaattaaaattt 42487376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 5039024 - 5039097
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||| ||||||  |||||||||||||||| ||||    
T  5039024 ttcattcaattaatgatgtatgtggttcatatacatcattaattgaatgaaaataaaaagtaaaatttgtttat 5039097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17911459 - 17911379
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||||| |||| |||||||| || |||||| | ||||| |||||| ||||||||||||||||||||||    
T  17911459 ttttaggttcattcaattagtgatgtatgtggtccatatacatcactaattgaatgaacctaaaaagtaaaatttgcttat 17911379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 7256949 - 7256897
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttttca 87  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  7256949 cacatacattattaattgaatgaatctaaaaagtaaaatttgtttatatttca 7256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17911395 - 17911475
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||||| |||| ||| |||  ||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  17911395 ttttaggttcattcaattagtgatgtatatggaccacatacatcactaattgaatgaacctaaaaagtaaaatttgcttat 17911475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32485003 - 32484957
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32485003 cacatacataattaattgaatgaatctaaaaagtaaaatttgcttat 32484957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 34194622 - 34194576
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  34194622 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 34194576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 40716808 - 40716762
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40716808 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 40716762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 42631841 - 42631795
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  42631841 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 42631795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 17116566 - 17116493
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||||||   ||||||||| ||||||| |||||| ||| ||||| ||||||||||||    
T  17116566 ttcattcaattaatgatgtatgtgtggcacatacatcattaattgaatgaacctataaagtcaaatttgcttat 17116493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 11302020 - 11302067
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||    
T  11302020 tcacatacattattaattaaatgaacctaaaaagttaattttgcttat 11302067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 11302967 - 11303014
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||    
T  11302967 tcacatacattattaattaaatgaacctaaaaagttaattttgcttat 11303014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43483964 - 43484056
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  43483964 ttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 43484056  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 32480274 - 32480320
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  32480274 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 32480320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 37922874 - 37922828
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37922874 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 37922828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 37922890 - 37922936
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37922890 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 37922936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43483994 - 43483948
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  43483994 cacatacatcattaattgaatgaatctaaaaagtgaaatttgcttat 43483948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 5039074 - 5039001
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||| ||   ||||||||| ||||||| ||||||  |||||||||||||||| ||||    
T  5039074 ttcattcaattaatgatgtatatgaaccacatacatcattaattgaatgaaaataaaaagtaaaatttgtttat 5039001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 17116516 - 17116589
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||||||   ||||||||| ||||||| ||||||  || ||||| ||||||||||||    
T  17116516 ttcattcaattaatgatgtatgtgccacacatacatcattaattgaatgaacatagaaagtcaaatttgcttat 17116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 34194639 - 34194684
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  34194639 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 34194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 35969741 - 35969786
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||    
T  35969741 acatacattattaattgaatgaacctaaaaagtaaaatttacttat 35969786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 38884025 - 38884070
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  38884025 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 38884070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 42835740 - 42835700
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  42835740 cacatacatcattaattaaatgaacctaaaaagtaaaattt 42835700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 9578501 - 9578454
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||| || ||||||||||||||||||||||    
T  9578501 tcacatacatcattaattgaataaacctaaaaagtaaaatttgcttat 9578454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 35447843 - 35447800
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||    
T  35447843 atacataattaattgaatgaacctaaaaagtaaaatttgcttat 35447800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 44838882 - 44838847
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  44838882 ttttggattcattcaattaatgatatatgtggttca 44838847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 1875750 - 1875704
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  1875750 cacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 1875704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 8568882 - 8568836
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  8568882 cacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 8568836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 26489667 - 26489621
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||| ||||||| |||| |||||||||    
T  26489667 cacatacattattaattcaatgaacctaaaaaataaattttgcttat 26489621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 27781962 - 27782008
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  27781962 cacatacatcattaattgaatgaccctaaaaagtaaaatttgcttat 27782008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 29730749 - 29730703
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||||| ||||| | ||||||||||||    
T  29730749 cacatacatcattaattaaatgaatccaaaaaattaaatttgcttat 29730703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32241810 - 32241764
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  32241810 cacatacataattaattgaatgaacctaaaaagtaaaatttgtttat 32241764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32480250 - 32480204
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||| ||||||||||||||||||    
T  32480250 cacatacatcattaattgaatgaacctagaaagtaaaatttgcttat 32480204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 35063538 - 35063584
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||||| || |||||||||    
T  35063538 cacatacatcattaattaaatgaacctaaaaagtcaattttgcttat 35063584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 38884008 - 38883962
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  38884008 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 38883962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 39655479 - 39655433
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  39655479 cacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 39655433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 40716824 - 40716870
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||| || ||||||| ||||||||||||||    
T  40716824 cacatacatcattaattaaattaagctaaaaaataaaatttgcttat 40716870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 40802265 - 40802219
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  40802265 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 40802219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 44282343 - 44282389
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||||    
T  44282343 cacatacatcattaattgaatgaatctaaaaaattaaatttgcttat 44282389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 13832110 - 13832081
Alignment:
Q  7 attcattcaattaatgatatatgtggttca 36  Q
    ||||||||||||||||||||||||||||||    
T  13832110 attcattcaattaatgatatatgtggttca 13832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 29110340 - 29110381
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||| ||||||| ||| |||||||||||||||||||    
T  29110340 tcacatacatcattaattgaataaatctaaaaagtaaaattt 29110381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42631811 - 42631844
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  42631811 ttttagattcattcaattaatgatgtatgtggtt 42631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44282373 - 44282336
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcaca 38  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  44282373 ttttagattcattcaattaatgatgtatgtggtccaca 44282336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5040100 - 5040132
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  5040100 ttttagattcattcaattaatgatgtatgtggt 5040132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 34188396 - 34188436
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  34188396 cacatacatcattaattgaatgaacctaaaaagtaaaattt 34188436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34194592 - 34194624
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  34194592 ttttagattcattcaattaatgatgtatgtggt 34194624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 36662632 - 36662688
Alignment:
Q  12 ttcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagt 68  Q
    |||| ||||| |||||||||| ||| |||||| ||||| | ||||||||||||||||    
T  36662632 ttcatttaataatatatgtggctcatatacataattaaatgaatgaatctaaaaagt 36662688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40716778 - 40716810
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  40716778 ttttagattcattcaattaatgatgtatgtggt 40716810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8126238 - 8126146
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt------------tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||||||||||||||    
T  8126238 ttttaggttcattcaattaatgatatatgtggtttataatatggatcacatacataattaattaaatgaatctaaaaagtaaaatttgcttat 8126146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1453418 - 1453492
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | ||||||    
T  1453418 ttttaggttcattcgattaatgatgtatgtggttcacatacaatattaattgaatgaacctaaaaaattaaattt 1453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 35760817 - 35760863
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  35760817 cacatacattattaattaaatgaatctaaaaagtaaaatttacttat 35760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 12569181 - 12569226
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  12569181 acatacattattaattgaatgaatctaaaaagtaaaatttgcttat 12569226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13545645 - 13545690
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  13545645 acatacattattaattgaatgaatctaaaaagtaaaatttgcttat 13545690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 5790711 - 5790665
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  5790711 cacatacattattaattgaatgaacctaaaaagtaaaatttgcttat 5790665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 24599941 - 24599895
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  24599941 cacatacattattaattgaatgaacctaaaaagtaaaatttgcttat 24599895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 34205641 - 34205687
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  34205641 cacatacatcattaattaaatgaatctaagaagtaaaatttgcttat 34205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 42595815 - 42595861
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  42595815 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 42595861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 46151084 - 46151038
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||    
T  46151084 cacatacattgttaattgaatgaatctaaaaagtaaaatttgcttat 46151038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 43898152 - 43898109
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  43898152 atacatcattaattgaatgaatctaaaaagtaaaatttgcttat 43898109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 50603614 - 50603547
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||| |||||| |||||||  ||||||||| ||| ||| ||||||| |||||||||||||||    
T  50603614 ttcattcaataaatgatgtatgtggaccacatacatcatttattgaatgaatttaaaaagtaaaattt 50603547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 22995758 - 22995712
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||    
T  22995758 cacatacatcattaattaaatgaacctaaaaagtaaaatttacttat 22995712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26770799 - 26770845
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  26770799 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 26770845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32589377 - 32589331
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  32589377 cacatacatcattaattgaatgaatctaaaaagtcaaatttgcttat 32589331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 34935600 - 34935554
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  34935600 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 34935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 34935615 - 34935665
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttatttt 84  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||| ||||    
T  34935615 tcacatacatcattaattgaataaatctaaaaagtaaaatttgcttttttt 34935665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 51256645 - 51256691
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||    
T  51256645 cacatatattattaactgaatgaatctaaaaagtaaaatttgcttat 51256691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 53717975 - 53718021
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  53717975 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 53718021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17940287 - 17940204
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcac---atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||| |||||||| |||||||| |||   |||||| ||||| | |||||| |||||||||||| |||||||||    
T  17940287 ttttaggttcattcatttaatgatgtatgtggtccaccacatacatcattaaatgaatgaacctaaaaagtaaattttgcttat 17940204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17940220 - 17940303
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt---cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||| |||||||| ||||||||    ||||||||| ||||| | |||||| |||||||||||| |||||||||    
T  17940220 ttttaggttcattcatttaatgatgtatgtggtggaccacatacatcattaaatgaatgaacctaaaaagtaaattttgcttat 17940303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 18480938 - 18480893
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctta 80  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||    
T  18480938 cacatacatcattaattaaatgaacctaaaaagtaaattttgctta 18480893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 5326836 - 5326872
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||| ||||||||||||||    
T  5326836 attaattaaatgaatctaaaaaataaaatttgcttat 5326872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 16127810 - 16127766
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctt 79  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  16127810 cacatacatcattaattgaatgaacctaaaaagtaaaatttgctt 16127766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 1044000 - 1044047
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||||||    
T  1044000 tcacatacatcattaattaaatgaacctaaaagttaaaatttgcttat 1044047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 7933595 - 7933642
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  7933595 tcacatacatcaataattgaatgaacctaaaaagtaaaatttgcttat 7933642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 29352791 - 29352744
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||| ||||||||| || |||||||||    
T  29352791 tcacatacattattaaataaatgaacctaaaaagtcaattttgcttat 29352744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32589347 - 32589382
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  32589347 ttttagattcattcaattaatgatgtatgtggttca 32589382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 34205626 - 34205579
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||| ||||||| |||||| ||||||||||||||||||||||    
T  34205626 tcacatgcatcattaattgaatgaacctaaaaagtaaaatttgcttat 34205579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 40504143 - 40504190
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||| ||||||  |||||||| ||||||||||||    
T  40504143 tcacatacattattaattgaatgaacataaaaagtcaaatttgcttat 40504190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 46739384 - 46739431
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||| ||||||  |||||||||||||| ||||||    
T  46739384 tcacatacattattaattgaatgaacttaaaaagtaaaattagcttat 46739431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 51204546 - 51204499
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| |||||    
T  51204546 tcacatacatcattaattaaatgaatttaagaagtaaaatttacttat 51204499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 52638111 - 52638158
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttatt 82  Q
    ||||||||| ||||||| |||||||||||||  |||||||||||||||    
T  52638111 cacatacatcattaattgaatgaatctaaaagttaaaatttgcttatt 52638158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5790727 - 5790773
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||| || |||||||||||||||| |||||    
T  5790727 cacatacattattaattgaataaacctaaaaagtaaaattttcttat 5790773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 16127826 - 16127872
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||| |||||||||||    
T  16127826 cacatacatcattaattgaatgaacctaaaaagtataatttgcttat 16127872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 17072665 - 17072619
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || || ||||||||||| ||||||||||||||||||||||    
T  17072665 cacatatatcatcaattaaatgaacctaaaaagtaaaatttgcttat 17072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 19679024 - 19678978
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||| |||||||||||||||    
T  19679024 cacatacatcattaattgaatgaacctaaaaggtaaaatttgcttat 19678978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 22995774 - 22995820
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||| |||||||||||||    
T  22995774 cacatacatcattaattgaatgaacctaaaaagcaaaatttgcttat 22995820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 24599957 - 24600003
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||| || ||||||||||||||||||||||    
T  24599957 cacatacatcattaattgaataaacctaaaaagtaaaatttgcttat 24600003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 26043308 - 26043266
Alignment:
Q  39 tacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||    
T  26043308 tacatcattaattcaatgaatctaaaaagtaaaatttacttat 26043266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 29076603 - 29076649
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||| || |||||||||    
T  29076603 cacatacatcattaattgaatgaatctaaaaagtcaattttgcttat 29076649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32827490 - 32827444
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  32827490 cacatacatcattaattgaatgaacctaaaaagtaaagtttgcttat 32827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 44435236 - 44435190
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  44435236 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 44435190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 44435252 - 44435298
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  44435252 cacatacatcattaattgaatgaacctaaaaagtgaaatttgcttat 44435298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 47342660 - 47342706
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||| |||||||| |||||||||||| |||||||||    
T  47342660 cacatacatcattaaataaatgaacctaaaaagtaaattttgcttat 47342706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 47900311 - 47900265
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  47900311 cacatacataattaattcaatgaacctaaaaagtaaaatttacttat 47900265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 49562097 - 49562051
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||  ||||||| ||| |||||||||||||||||||||||||    
T  49562097 cacatacaacattaattgaataaatctaaaaagtaaaatttgcttat 49562051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 50623118 - 50623160
Alignment:
Q  39 tacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||    
T  50623118 tacatcattaattgaatgaatctaaaaaataaaatttgcttat 50623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 7672772 - 7672817
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| || ||||||| ||||||||||||||||||||||| |||||    
T  7672772 acataaatcattaattgaatgaatctaaaaagtaaaattttcttat 7672817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 19679041 - 19679086
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||||    
T  19679041 acatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 19679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 22153140 - 22153173
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaa 71  Q
    ||||||||||||||||||| ||||||||||||||    
T  22153140 atacattattaattaaatgtatctaaaaagtaaa 22153173  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 32833741 - 32833696
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||||    
T  32833741 acatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 32833696  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 38455242 - 38455279
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaa 71  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  38455242 tcacatacatcattaattaaatgtatctaaaaagtaaa 38455279  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50603557 - 50603614
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaa 58  Q
    ||||| ||||||||||| |||||| |||||||| ||||||||| ||| ||| ||||||    
T  50603557 ttttaaattcattcaataaatgatgtatgtggtccacatacatcatttattgaatgaa 50603614  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 51256628 - 51256583
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  51256628 acatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 51256583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 54680568 - 54680613
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  54680568 acatacatcattaattgaatgaacctaaaaaataaaatttgcttat 54680613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 105445 - 105401
Alignment:
Q  24 tatatgtggttcacatacattattaattaaatgaatctaaaaagt 68  Q
    ||||| |||||||||||||| ||| ||| ||||||||||||||||    
T  105445 tatatatggttcacatacatcatttattcaatgaatctaaaaagt 105401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 7672745 - 7672709
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  7672745 attaattgaatgaatctaaaaagtaaaattttcttat 7672709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 13083948 - 13083980
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaa 66  Q
    |||||||||| ||||||||||||||||||||||    
T  13083948 tcacatacatcattaattaaatgaatctaaaaa 13083980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13084153 - 13084121
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||||||||||||| |||||||||||||||||    
T  13084153 ttttagattcattcatttaatgatatatgtggt 13084121  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21659246 - 21659214
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  21659246 ttttaggttcattcaattaatgatatatgtggt 21659214  T

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Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29076633 - 29076601
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  29076633 ttttagattcattcaattaatgatgtatgtggt 29076601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29720257 - 29720225
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  29720257 ttttagatgcattcaattaatgatatatgtggt 29720225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 39289643 - 39289679
Alignment:
Q  39 tacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  39289643 tacatcattaattaaatgaaactaaaaagtaaaattt 39289679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42595845 - 42595813
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  42595845 ttttagattcattcaattaatgatgtatgtggt 42595813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43159342 - 43159374
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  43159342 ttttagattcatttaattaatgatatatgtggt 43159374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 43906796 - 43906828
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaa 66  Q
    |||||||||||||| ||||||||||||||||||    
T  43906796 tcacatacattattgattaaatgaatctaaaaa 43906828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 46739366 - 46739326
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgct 78  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  46739366 atacatcattaattgaatgaacctaaaaagtaaaatttgct 46739326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 47915252 - 47915280
Alignment:
Q  8 ttcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||||||||    
T  47915252 ttcattcaattaatgatatatgtggttca 47915280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51486458 - 51486490
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  51486458 ttttaggttcattcaattaatgatatatgtggt 51486490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 52168345 - 52168309
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaa 71  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  52168345 cacatacatcattaattaaatgtatctaaaaagtaaa 52168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 52638141 - 52638109
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  52638141 ttttagattcattcaattaatgatgtatgtggt 52638109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 12171720 - 12171674
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttatt 82  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  12171720 acatacatcattaattaaatgaatctaaaaagtaaaatttgcttatt 12171674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 43232911 - 43232989
Alignment:
Q  3 ttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||| ||||||||||||||||| ||| |||  || |||||| ||||||| |||||| ||||||||||||||||||||||    
T  43232911 ttaggttcattcaattaatgatgtatatggaccatatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 43232989  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5212151 - 5212086
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaa 66  Q
    |||||| |||||||| |||||||| |||||||||||||||||| ||||| | ||||||||||||||    
T  5212151 ttttaggttcattcatttaatgatgtatgtggttcacatacatcattaaatgaatgaatctaaaaa 5212086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43232973 - 43232893
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| ||| |||| || |||||| ||||||| |||||| |||| |||||||||||| ||||    
T  43232973 ttttaggttcattcaattaatgatgtatatggtccatatacatcattaattgaatgaacctaagaagtaaaatttgtttat 43232893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 48392929 - 48392882
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  48392929 tcacatacatcactaattaaatgaatctaaaaagtaaaatttgcttat 48392882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 3498356 - 3498310
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  3498356 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 3498310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9503974 - 9504020
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  9503974 cacatacatcattaattaaatgaatctaaaaagttaaatttgcttat 9504020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 24211613 - 24211567
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  24211613 cacatacattattaattgaatgaatctaaaaagtaaaatttacttat 24211567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 27942384 - 27942338
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttatttt 84  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  27942384 atacatcattaattgaatgaatctaaaaagtaaaatttgcttatttt 27942338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 46658810 - 46658856
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  46658810 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 46658856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 27940822 - 27940869
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  27940822 tcacatacatcattaattcaatgaacctaaaaagtaaaatttgcttat 27940869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 28003255 - 28003302
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  28003255 tcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 28003302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 7344976 - 7345022
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  7344976 cacatacatcattaattgaatgaaactaaaaagtaaaatttgcttat 7345022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 19532015 - 19531969
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  19532015 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 19531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20353119 - 20353073
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  20353119 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 20353073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 33471552 - 33471506
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  33471552 cacatacatcattaattgaatgaatctaaaaaataaaatttgcttat 33471506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 37066244 - 37066198
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37066244 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 37066198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 37066260 - 37066306
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37066260 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 37066306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38391895 - 38391941
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||||    
T  38391895 cacatacatcattaattaaatgaacctaaaatgtaaaatttgcttat 38391941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 45833272 - 45833314
Alignment:
Q  39 tacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    
T  45833272 tacatcattaattgaatgaatctaaaaagtaaaatttgcttat 45833314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 46221156 - 46221202
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  46221156 cacatacatcattaattaaatgaacctaaaaaataaaatttgcttat 46221202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 46477195 - 46477149
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  46477195 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 46477149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7345006 - 7344923
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca---catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||||| ||    |||||| ||||||| ||| || ||||||||| ||||||||||||    
T  7345006 ttttagtttcattcaattaatgatgtatgtggtccatattatacatcattaattgaatcaacctaaaaagttaaatttgcttat 7344923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 9140200 - 9140272
Alignment:
Q  8 ttcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| |||||||| |||||| | ||||||||| ||||| | |||||||||||||||| || |||||||||    
T  9140200 ttcattcatttaatgatgtatgtgat-cacatacatcattaaatgaatgaatctaaaaagtcaattttgcttat 9140272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 18941390 - 18941435
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  18941390 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 18941435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 19532032 - 19532077
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  19532032 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 19532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 20353156 - 20353201
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  20353156 acatacatcattaattgaatgaatctaaaaagtaaaatttgattat 20353201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 46578344 - 46578389
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  46578344 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 46578389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 46658793 - 46658748
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  46658793 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 46658748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5212087 - 5212167
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||| |||||||| ||||||   ||||||||| ||||| | |||||| ||||||||| || ||| |||||    
T  5212087 ttttagattcattcatttaatgatgtatgtgaaccacatacatcattaaatgaatgaacctaaaaagtgaattttacttat 5212167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 21387654 - 21387694
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  21387654 cacatacatcatttattaaatgaatctaaaaagtaaaattt 21387694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31669891 - 31669811
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||| | ||||| || |||||||  ||||||||| ||||| | |||||| ||||||||| ||||||||||||    
T  31669891 ttttaggttcatttatttaattatgtatgtggaccacatacatcattaaatgaatgaacctaaaaagtcaaatttgcttat 31669811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 31857138 - 31857194
Alignment:
Q  25 atatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||  ||||||||||||||| |||||||| ||||||||| || |||||||||    
T  31857138 atatgtggaccacatacattattaaataaatgaacctaaaaagtcaattttgcttat 31857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46470984 - 46471016
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||||||||||||    
T  46470984 ttttagattcattcaattaatgatatatgtggt 46471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3498326 - 3498418
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt------------cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||            ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  3498326 ttttagattcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 3498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 23092413 - 23092370
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||  |||||||| ||||||||||||    
T  23092413 atacattattaattaaatgaacttaaaaagttaaatttgcttat 23092370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 27234966 - 27234931
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  27234966 ttttaggttcattcaattaatgatatatgtggttca 27234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 33471522 - 33471557
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  33471522 ttttagattcattcaattaatgatgtatgtggttca 33471557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5691554 - 5691600
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  5691554 cacatacatcattaattgaatgaatttaaaatgtaaaatttgcttat 5691600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 8379199 - 8379153
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  8379199 cacatacatcattaattgaatgaacctaaaaagttaaatttgcttat 8379153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 11032365 - 11032319
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||| |||||||| ||||||||||||    
T  11032365 cacatacatcattaattgaatgaatataaaaagtcaaatttgcttat 11032319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 11032381 - 11032427
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||| |||||||    
T  11032381 cacatacatcattaattgaatgaacctaaaaagtaaaatctgcttat 11032427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 13846772 - 13846726
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  13846772 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 13846726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17882786 - 17882832
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  17882786 cacatacattattaatcgaataaatctaaaaagtaaaatttacttat 17882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 27234916 - 27234874
Alignment:
Q  39 tacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||    
T  27234916 tacatcattaattgaatgaacctaaaaagtaaaatttgcttat 27234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 27940807 - 27940761
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  27940807 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 27940761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 27942403 - 27942449
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  27942403 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 27942449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 28003240 - 28003194
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  28003240 cacatacatcaataattgaatgaacctaaaaagtaaaatttgcttat 28003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 31671091 - 31671016
Alignment:
Q  2 tttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| || |||||||||||||| |||||||    ||||||| ||||||| ||||||  ||||||||||||||| |||||    
T  31671091 tttaggtttattcaattaatgatgtatgtgg----catacataattaattgaatgaacataaaaagtaaaatttacttat 31671016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 33784122 - 33784076
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||    
T  33784122 cacatacatcattaattgaatgaatttaaaaagtaaaatttacttat 33784076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 36711601 - 36711555
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  36711601 cacatacatcattaattgaatgaaccgaaaaagtaaaatttgcttat 36711555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 39728644 - 39728690
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||    
T  39728644 cacatacattattaatgaaatgaacttaaaaagtaaaatttacttat 39728690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43067086 - 43067040
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  43067086 cacatacatcattaattgaatgaacctaaaaagtaaattttgcttat 43067040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 43093495 - 43093541
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  43093495 cacatacataattaattcaatgaacctaaaaagtaaattttgcttat 43093541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 45833252 - 45833206
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  45833252 cacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 45833206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 46471030 - 46471076
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| ||| ||||||  |||||||||||||||||||||||||||||    
T  46471030 cacatgcataattaatcgaatgaatctaaaaagtaaaatttgcttat 46471076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 46477211 - 46477257
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  46477211 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 46477257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 48392944 - 48392990
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  48392944 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 48392990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 48590647 - 48590601
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  48590647 cacatacatcattaatttaatgaacctaaaaagtaaaatttgtttat 48590601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31601309 - 31601264
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| |||||||||||||| ||| ||| ||||||||||||||    
T  31601309 acatacatcattaattaaatgaacctacaaaataaaatttgcttat 31601264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 46578327 - 46578282
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctta 80  Q
    ||||||||| ||||||| ||||||| |||||||| |||||||||||    
T  46578327 cacatacatcattaattgaatgaatttaaaaagtcaaatttgctta 46578282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 46774623 - 46774546
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||||| |||| |||||||||  ||||||| |||||  |||||||  ||||||||||||||| |||||    
T  46774623 ttttaggttcattcaattattgatgtatgtggtt--catacatcattaa-aaaatgaacttaaaaagtaaaatttacttat 46774546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 48135527 - 48135482
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| || ||||| | |||||||||||||||||||||||||||||    
T  48135527 acatatatcattaaatgaatgaatctaaaaagtaaaatttgcttat 48135482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 18941386 - 18941350
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  18941386 attaattgaatgaacctaaaaagtaaaatttgcttat 18941350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 23092434 - 23092478
Alignment:
Q  37 catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||||    
T  23092434 catacatcattaattaaatgattgtaaaaagttaaatttgcttat 23092478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 24166302 - 24166330
Alignment:
Q  8 ttcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||||||||    
T  24166302 ttcattcaattaatgatatatgtggttca 24166330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 31365646 - 31365690
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctt 79  Q
    ||||||||| ||||||| ||| |||||| ||||||||||||||||    
T  31365646 cacatacatcattaattgaataaatctagaaagtaaaatttgctt 31365690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 40069441 - 40069469
Alignment:
Q  8 ttcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||||||||    
T  40069441 ttcattcaattaatgatatatgtggttca 40069469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 13743920 - 13743874
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13743920 cacatacatcattaattaaatgaatctaaaaagtaaaatttgcttat 13743874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17659573 - 17659481
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt------------cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||||||||||||||||||||            ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  17659573 ttttagattcattcaattaatgatatatgtggttcaaaatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 17659481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26206626 - 26206718
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||||||||||||||            ||||||| |||||||||||||| ||||||||||||||||||||||    
T  26206626 ttttagatttattcaattaatgatatatgtggttcataatatggaccacatacatcattaattaaatgaacctaaaaagtaaaatttgcttat 26206718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 25856072 - 25856026
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  25856072 cacatacatcattgattaaatgaatctaaaaagtaaaatttgcttat 25856026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 46779372 - 46779418
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  46779372 cacatacatcattaattaaatgaatctaaaaaataaaatttgcttat 46779418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 50038512 - 50038466
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  50038512 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 50038466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 50045734 - 50045688
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  50045734 cacatacatcattaattgaatgaatctaaaaagtaaaatttgcttat 50045688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 24331486 - 24331441
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  24331486 acatacattattaattgaatgaatctaaaaaataaaatttgcttat 24331441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 37306890 - 37306847
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  37306890 atacatcattaattaaatgaacctaaaaagtaaaatttgcttat 37306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44639854 - 44639762
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  44639854 ttttagattcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 44639762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 11511746 - 11511792
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  11511746 cacatacatcattaattaaatgaacctaaaaagttaaatttgcttat 11511792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 12721707 - 12721661
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  12721707 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 12721661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 12721724 - 12721770
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  12721724 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 12721770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 13743936 - 13743982
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  13743936 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 13743982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 15185903 - 15185949
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  15185903 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 15185949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17659543 - 17659589
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || ||||||| |||||||||||||||||||||||||||||    
T  17659543 cacatatatcattaattgaatgaatctaaaaagtaaaatttgcttat 17659589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 25856088 - 25856134
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  25856088 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 25856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 30051421 - 30051467
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  30051421 cacatacatcattaattgaacgaatctaaaaagtaaaatttgcttat 30051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 30279218 - 30279264
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  30279218 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 30279264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43635898 - 43635852
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  43635898 cacatacatcattaattgaatgaatctaaaaagtaaaattttcttat 43635852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 44639824 - 44639870
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  44639824 cacatacatcattaattgaatgaatctaaaaagtgaaatttgcttat 44639870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 48079578 - 48079532
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  48079578 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 48079532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 49573941 - 49573895
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  49573941 cacatacatcattaattgaatgaatctataaagtaaaatttgcttat 49573895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 51126167 - 51126121
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  51126167 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 51126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 51126183 - 51126229
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  51126183 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 51126229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 53176689 - 53176735
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  53176689 cacatacatcattaattgaatgaatttaaaaagtaaaatttgcttat 53176735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 11583786 - 11583831
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||    
T  11583786 acatacatcattaattgaatgaatctaaaaagtcaaatttgcttat 11583831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 56420510 - 56420555
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  56420510 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 56420555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 5289764 - 5289724
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  5289764 cacatacatcattaattgaatgaatctaaaaagtaaaattt 5289724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 15133914 - 15133958
Alignment:
Q  37 catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||    
T  15133914 catacatcattaattgaatgaatttaaaaagtaaaatttgcttat 15133958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19754247 - 19754279
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||||||||||||    
T  19754247 ttttagattcattcaattaatgatatatgtggt 19754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19785559 - 19785527
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||||||||||||    
T  19785559 ttttagattcattcaattaatgatatatgtggt 19785527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 55501264 - 55501220
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctt 79  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  55501264 cacatacatcattaattgaatgaacctaaaaagtaaaatttgctt 55501220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 15133890 - 15133843
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  15133890 tcacatacatcattaattgaatgaacctaaaaagtaaattttgcttat 15133843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30162719 - 30162684
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  30162719 ttttaggttcattcaattaatgatatatgtggttca 30162684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34459093 - 34459058
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||| |||||||||||||||||||||||||||||    
T  34459093 ttttaggttcattcaattaatgatatatgtggttca 34459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 39017573 - 39017526
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  39017573 tcacatacatcattaatgaaatgaatataaaaagttaaatttgcttat 39017526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43635868 - 43635960
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| ||| || ||||||||||||||||||||||    
T  43635868 ttttagattcattcaattaatgatgtatgtggttcatattatgaactacatacatcattaattgaatcaacctaaaaagtaaaatttgcttat 43635960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 45890985 - 45890938
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||| ||| |||||||||||||||||||||    
T  45890985 tcacatacatcattaattcaataaatataaaaagtaaaatttgcttat 45890938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50038482 - 50038574
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| |||||| |||||||||||||||| |||||    
T  50038482 ttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 50038574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50045704 - 50045796
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| |||||| |||||||||||||||| |||||    
T  50045704 ttttagattcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 50045796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 52256819 - 52256866
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||    
T  52256819 tcacatacatcattaattaaataaacctaaaaaataaaatttgcttat 52256866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9052009 - 9052055
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||| ||||||||||||||| ||||    
T  9052009 cacatacatcattaattgaatgaatcgaaaaagtaaaatttgtttat 9052055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9968363 - 9968317
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  9968363 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 9968317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17028311 - 17028357
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  17028311 cacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 17028357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 19754277 - 19754231
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || ||||||| ||||||||||||||||||||||| |||||    
T  19754277 cacatatatcattaattgaatgaatctaaaaagtaaaatttacttat 19754231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 19785529 - 19785575
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || ||||||| ||||||||||||||||||||||| |||||    
T  19785529 cacatatatcattaattgaatgaatctaaaaagtaaaatttacttat 19785575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 23329432 - 23329386
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  23329432 cacatacatcattaattgaatgaacctaaaaagtaaaatttacttat 23329386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 23710897 - 23710851
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  23710897 cacatacatcaataattgaatgaacctaaaaagtaaaatttgcttat 23710851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 23754270 - 23754316
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || ||||||| |||||| ||||||||||||||||||||||    
T  23754270 cacatatatcattaattgaatgaacctaaaaagtaaaatttgcttat 23754316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 29978554 - 29978508
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| || |||||||||||||||||||    
T  29978554 cacatacatcattaattgaatgaaccttaaaagtaaaatttgcttat 29978508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 30162673 - 30162627
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  30162673 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 30162627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 34709637 - 34709591
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||| | ||||||||||||||||||| |||||||||    
T  34709637 cacatacatcattaaatgaatgaatctaaaaagtaaattttgcttat 34709591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 34827550 - 34827596
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||| ||||| ||||||||    
T  34827550 cacatacatcattaattgaatgaatctaaaaaataaaacttgcttat 34827596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38224015 - 38224061
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||| | |||||||||||||||| || |||||||||    
T  38224015 cacatacattattaaatgaatgaatctaaaaagtcaattttgcttat 38224061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 38938103 - 38938057
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  38938103 cacatacattattaattgaatgaatctaaaatgtcaaatttacttat 38938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 41788983 - 41788937
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  41788983 cacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 41788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 42013208 - 42013162
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||| ||||||||||||||| |||||    
T  42013208 cacatacatcattaattgaatgaatttaaaaagtaaaatttacttat 42013162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 48042653 - 48042607
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||  ||| |||||||||||||||||    
T  48042653 cacatacatcattaattaaatgaacttaagaagtaaaatttgcttat 48042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 49745541 - 49745587
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  49745541 cacatacatcattaattaaatggacctaaaaaataaaatttgcttat 49745587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 50519340 - 50519386
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  50519340 cacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 50519386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 51975202 - 51975248
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  51975202 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 51975248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 53508562 - 53508516
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  53508562 cacatacatcattaattgaatgagcctaaaaagtaaaatttgcttat 53508516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 55131614 - 55131660
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  55131614 cacatacataattaattgaatgaacctaaaaagttaaatttgcttat 55131660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 55501280 - 55501326
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  55501280 cacatacaccattaattgaatgaacctaaaaagtaaaatttgcttat 55501326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 5048496 - 5048451
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| || |||||||||||||||||||||| ||||||||| ||||    
T  5048496 acatatatcattaattaaatgaatctaaaaaataaaatttgtttat 5048451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 33520619 - 33520652
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagt 68  Q
    ||||||||| ||||||||||||||||||||||||    
T  33520619 cacatacatcattaattaaatgaatctaaaaagt 33520652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34827580 - 34827547
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  34827580 ttttagattcattcaattaatgatgtatgtggtt 34827547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37381159 - 37381126
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||| |||||||||||||||||||||||    
T  37381159 ttttagattcgttcaattaatgatatatgtggtt 37381126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 39754160 - 39754115
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||||    
T  39754160 acatacatcattaattgaataaacctaaaaagtaaaatttgcttat 39754115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 42184716 - 42184757
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||||||||||| |||||||||||||| | ||||||    
T  42184716 tcacatacattattaattgaatgaatctaaaaaattaaattt 42184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 46996553 - 46996598
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| || |||||||||||||| ||||||||||||||||| ||||    
T  46996553 acataaatcattaattaaatgaacctaaaaagtaaaatttgtttat 46996598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48042670 - 48042715
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  48042670 acatacatcattaattgaatgaacctaaaaagtgaaatttgcttat 48042715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48079595 - 48079640
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| | ||||| |||||| ||||||||||||||||||||||    
T  48079595 acatacatcaataattgaatgaacctaaaaagtaaaatttgcttat 48079640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 48995619 - 48995578
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  48995619 tcacatacattatttattaaatgaatctaaaatataaaattt 48995578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5289734 - 5289766
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  5289734 ttttagattcattcaattaatgatgtatgtggt 5289766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 13689615 - 13689647
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagt 68  Q
    |||||||||||||||| ||||||||||||||||    
T  13689615 acatacattattaattgaatgaatctaaaaagt 13689647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20598365 - 20598333
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||||||||||||||| |||||||||||||||    
T  20598365 ttttagattcattcaataaatgatatatgtggt 20598333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 23710913 - 23710953
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||||||| |||||| ||||||||||||||||    
T  23710913 cacatacatcattaattgaatgaacctaaaaagtaaaattt 23710953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23754300 - 23754268
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  23754300 ttttaggttcattcaattaatgatatatgtggt 23754268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37306960 - 37306891
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaa 72  Q
    ||||| |||||||||||||||||| ||| | |||  ||||||| ||||||| |||||| ||||||| |||||    
T  37306960 ttttaaattcattcaattaatgatgtatatagtt--catacatcattaattgaatgaacctaaaaactaaaa 37306891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39294205 - 39294237
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  39294205 ttttaggttcattcaattaatgatatatgtggt 39294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 39754187 - 39754223
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  39754187 attaattaaatgaacctaaaaaataaaatttgcttat 39754223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 50533178 - 50533142
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  50533178 attaattgaatgaacctaaaaagtaaaatttgcttat 50533142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30514 - 30433
Alignment:
Q  1 ttttagattcattcaattaa-tgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||| ||| | || ||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||    
T  30514 ttttaggttcattcaaataaattatgtatgtggttcatatacatcattaattaaatgaagctaacaagtaaaatttgcttat 30433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7246915 - 7246980
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaa 66  Q
    |||||| ||||||||||||||||| |||||||| |||||| |||||||||| |||||| |||||||    
T  7246915 ttttaggttcattcaattaatgatgtatgtggtccacatatattattaattgaatgaacctaaaaa 7246980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11989250 - 11989162
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca--------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||||||||        ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  11989250 ttttaggttcattcaattaatgatgtatgtggttcataagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 11989162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7246979 - 7246915
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaa 65  Q
    |||||| |||||||||||||| ||||||||||  ||||||||| ||||||| |||||| ||||||    
T  7246979 ttttaggttcattcaattaataatatatgtggaccacatacatcattaattgaatgaacctaaaa 7246915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11989178 - 11989266
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt--------cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| ||||||||         ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  11989178 ttttaggttcattcaattaatgatgtatgtggtcttatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 11989266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 7418937 - 7418891
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  7418937 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 7418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 10731551 - 10731597
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  10731551 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 10731597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32786178 - 32786132
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  32786178 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 32786132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 32786194 - 32786240
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  32786194 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 32786240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 19687528 - 19687483
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  19687528 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 19687483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31577500 - 31577455
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||    
T  31577500 acatacataattaattgaatgaatctaaaaaataaaatttgcttat 31577455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 6048064 - 6048029
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  6048064 ttttagattcattcaattaatgatgtatgtggttca 6048029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 10731536 - 10731489
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||| | |||||| ||||||||||||||||||||||    
T  10731536 tcacatacatcattaaatgaatgaacctaaaaagtaaaatttgcttat 10731489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 15467636 - 15467589
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| | |||||||||||||||||||||| |||||| |||||    
T  15467636 tcacatacatcaataattaaatgaatctaaaaagtcaaatttacttat 15467589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 17854899 - 17854852
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||||||||||| ||||||||| ||||    
T  17854899 tcacatacatcattaattgaatgaatctaaaaaataaaatttgtttat 17854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 21478585 - 21478620
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  21478585 ttttagattcattcaattaatgatgtatgtggttca 21478620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 1858339 - 1858293
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| |||||| |||||||| ||||| ||||||||||||||    
T  1858339 cacatacattgttaattgaatgaatccaaaaaataaaatttgcttat 1858293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3418834 - 3418880
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||| ||||||||| || |||||||||    
T  3418834 cacatacattattaattgaatgaacctaaaaagtcaattttgcttat 3418880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9908198 - 9908152
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  9908198 cacatacatcattgattgaatgaacctaaaaagtaaaatttgcttat 9908152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 19687545 - 19687587
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgc 77  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||    
T  19687545 cacatacatcattaattgaatgaacctaaaaagtaaaatttgc 19687587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 26295436 - 26295390
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||  ||||||||||||||||||||||| ||||    
T  26295436 cacatacatcattaattgcatgaatctaaaaagtaaaatttgtttat 26295390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26498671 - 26498717
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||| ||| ||||||||| ||||||||||||    
T  26498671 cacatacatcattaattaaacgaacctaaaaagtcaaatttgcttat 26498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28648483 - 28648529
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||  |||||| ||||||||||||||||||||||    
T  28648483 cacatacatcattaatggaatgaacctaaaaagtaaaatttgcttat 28648529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8029465 - 8029428
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcaca 38  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  8029465 ttttagattcattcaattaatgatttatgtggtccaca 8029428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 17181370 - 17181415
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||    
T  17181370 acatacaacattaattgaatgaatctaaaaagtaaaatttgtttat 17181415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 6048019 - 6047971
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagt-aaaatttgcttat 81  Q
    |||||||||| ||||||| |||||||||||||||| |||||||| ||||    
T  6048019 tcacatacatcattaattgaatgaatctaaaaagtcaaaatttgtttat 6047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 27082451 - 27082491
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||||||||||| ||||||||||||||  |||||||    
T  27082451 cacatacattattaattgaatgaatctaaaaatcaaaattt 27082491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 14092 - 14045
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttattttt 85  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  14092 atacatcattaattgaatgaatctaaaaagtaaaatttgcttattttt 14045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 14112 - 14157
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| || ||||||| |||||| ||||||||||||||||||||||    
T  14112 acatagatcattaattgaatgaacctaaaaagtaaaatttgcttat 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 572 - 526
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||    
T  572 cacatacatcaataattaaatgaatctaaaaagtaaaatttgcttat 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 5204954 - 5204908
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  5204954 cacatacatcattaattaaatgaacctaaaaagtaaaatttgcttat 5204908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 8554733 - 8554687
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  8554733 cacatatatcattaattaaatgaatctaaaaagtaaaatttgcttat 8554687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 25668489 - 25668535
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  25668489 cacatacatcattaattaaatgaacctaaaaagtaaaatttgcttat 25668535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26269371 - 26269417
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||    
T  26269371 cacatacattattaattaaatgaatctaaaatataaaatttgcttat 26269417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 604918 - 604873
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  604918 acatacattattaattgaatgaatctaaaaaataaaatttgcttat 604873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38262024 - 38262109
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt-----tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||| |     |||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  38262024 ttttaggttcattcaattaatgatgtatgtgatatggatcacatacatcattaattgaatgaacctaaaaaataaaatttgcttat 38262109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 4898228 - 4898181
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  4898228 tcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 4898181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 4945622 - 4945575
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  4945622 tcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 4945575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 20195352 - 20195305
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  20195352 tcacatacatcattaattgaatgaatctaaaaagtaaaatttacttat 20195305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 29771781 - 29771734
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  29771781 tcacatacatcattaattgaatgaatctaaaaagtaaaatttgtttat 29771734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36490511 - 36490603
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  36490511 ttttagattcattcaattaatgatgtatgtggttcataatacgtaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 36490603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 2795388 - 2795434
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  2795388 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 2795434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 5144330 - 5144284
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  5144330 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 5144284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9158036 - 9157990
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  9158036 cacatacatcattaattgaaagaatctaaaaagtaaaatttgcttat 9157990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 10041604 - 10041558
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  10041604 cacatacatcattaattaaatgaatctaaaatgtaaaattttcttat 10041558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 10099614 - 10099568
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||||    
T  10099614 cacatacatcattaattaaatgaacctaaaatgtaaaatttgcttat 10099568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 20128806 - 20128760
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  20128806 cacatacattattaattgaataaatctaaaaagtaaaatttgattat 20128760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 24971267 - 24971221
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||    
T  24971267 cacatacatcattagttgaatgaatctaaaaagtaaaatttgcttat 24971221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 26567698 - 26567652
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  26567698 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 26567652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 32473533 - 32473487
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  32473533 cacatacatcattaattgaatgaatctaaaaaataaaatttgcttat 32473487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 34911176 - 34911222
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  34911176 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 34911222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 37486077 - 37486123
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37486077 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 37486123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 40340547 - 40340593
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  40340547 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 40340593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 42579097 - 42579143
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  42579097 cacatacatcattaattgaatgaatctaaaaagtaaaatttacttat 42579143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 45123873 - 45123919
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  45123873 cacatacattattaattgaatgaacctaaaaagtaaaatttacttat 45123919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 24971284 - 24971329
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  24971284 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 24971329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 29712564 - 29712609
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgctta 80  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||    
T  29712564 cacatacatcattaattgaatgaacctaaaaagtaaaatttgctta 29712609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31211821 - 31211751
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||| ||||||||| |||||||||||          ||||| |||||||||||||||||||||||||||||    
T  31211821 ttttagattcattccattaatgatgtatgtggttca----------taattgaatgaatctaaaaagtaaaatttgcttat 31211751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42579127 - 42579041
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca------------catacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||||||||||||||||| |||||||||||            ||||||| ||||||||||||||| |||||||||||||||    
T  42579127 ttttagattcattcaattaatgatgtatgtggttcataatatggactacatacatcattaattaaatgaatttaaaaagtaaaattt 42579041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 5144346 - 5144386
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  5144346 cacatacatcattaattaaatgaacctaaaaagtaaaattt 5144386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 27743694 - 27743734
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  27743694 cacatacatcattaattgaatgaatctaaaaagtaaaattt 27743734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 41145361 - 41145280
Alignment:
Q  8 ttcattcaattaatgatatatgtggtt--------cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||||||||||||||         ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  41145361 ttcattcaattaatgatatatgtggtcttatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 41145280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 17844010 - 17843967
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||    
T  17844010 atacatcattaattgaatgaacctaaaaagtaaaatttgcttat 17843967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 32473503 - 32473538
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttca 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  32473503 ttttagattcattcaattaatgatgtatgtggttca 32473538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 43514837 - 43514880
Alignment:
Q  38 atacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||    
T  43514837 atacatcattaattgaatgaacctaaaaagtaaaatttgcttat 43514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5094918 - 5094964
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||| | ||||||||||||||||||| |||||||||    
T  5094918 cacatacatcattaaatgaatgaatctaaaaagtaaattttgcttat 5094964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 5580312 - 5580266
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||||||||||  ||||||||||||||    
T  5580312 cacatacatcattaattgaatgaatctaaaagctaaaatttgcttat 5580266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 9709720 - 9709674
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||| || ||||||||||||||||||||||    
T  9709720 cacatacatcattaattgaattaacctaaaaagtaaaatttgcttat 9709674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 17844029 - 17844075
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  17844029 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 17844075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 20195367 - 20195413
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  20195367 cacatacatcattaattgaatgaacctaaaaactaaaatttgcttat 20195413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 27327892 - 27327846
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  27327892 cacatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 27327846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 28680917 - 28680963
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||||||||||| |||||||| ||||    
T  28680917 cacatacatcattaattgaatgaatctaaaaagaaaaatttgtttat 28680963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 29771796 - 29771842
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  29771796 cacatacatcattaattgaatgaacataaaaagtaaaatttgcttat 29771842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 30905186 - 30905140
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| | |||||||||||| ||||||||||||||||| ||||    
T  30905186 cacatacatcaataattaaatgaacctaaaaagtaaaatttgtttat 30905140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 32070539 - 32070585
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| |||||| |||||||||||||||    
T  32070539 cacatacatcattaattgaatgaacctaaaatgtaaaatttgcttat 32070585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35607508 - 35607431
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||   || |||  ||||||||| ||||||| |||||| ||||||||| |||||| |||||    
T  35607508 ttttaggttcattcaattaatga---atatggaccacatacatcattaattgaatgaacctaaaaagtcaaatttacttat 35607431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35607447 - 35607524
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||||||||||| |||||||| || ||   | ||||||| |||||| ||||||||| |||||| |||||    
T  35607447 ttttaggttcattcaattaatgatgtatgtggtccatat---tcattaattgaatgaacctaaaaagtcaaatttacttat 35607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 37486034 - 37485988
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  37486034 cacatacatcattaattgaatgaacataaaaagtaaaatttgcttat 37485988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 40739554 - 40739508
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || ||||||| |||||| ||||||||||||||||||||||    
T  40739554 cacatatatcattaattgaatgaacctaaaaagtaaaatttgcttat 40739508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43514818 - 43514772
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  43514818 cacatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 43514772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 324857 - 324812
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||||    
T  324857 acatacatcattaattgaatgaacttaaaaagtaaaatttgcttat 324812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4637115 - 4637082
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  4637115 ttttagattcattcaattaatgatgtatgtggtt 4637082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5580282 - 5580315
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  5580282 ttttagattcattcaattaatgatgtatgtggtt 5580315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6096378 - 6096345
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  6096378 ttttagatttattcaattaatgatatatgtggtt 6096345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 7993158 - 7993113
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||| | |||||||||||||||| || |||||||||    
T  7993158 acatacattattaaatgaatgaatctaaaaagtcaattttgcttat 7993113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 9436497 - 9436538
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||| ||||||||||||||| |||||||| ||||||    
T  9436497 tcacatacatcattaattaaatgaatataaaaagtcaaattt 9436538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12017860 - 12017775
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacatta-----ttaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||||||||| || ||||| |||||||| |||||||| ||     |||| | |||||||||||||||| || |||||||||    
T  12017860 ttttagattcattcatttgatgatgtatgtggtccacatacagtacatcattaaatgaatgaatctaaaaagtcaattttgcttat 12017775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18461481 - 18461444
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcaca 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  18461481 ttttagtttcattcaattaatgatgtatgtggttcaca 18461444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 26567715 - 26567760
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| | ||||| |||||| ||||||||||||||||||||||    
T  26567715 acatacatcaataattgaatgaacctaaaaagtaaaatttgcttat 26567760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27743724 - 27743691
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggtt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  27743724 ttttagattcattcaattaatgatgtatgtggtt 27743691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 33150136 - 33150091
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||||    
T  33150136 acatacatcattaattgaataaacctaaaaagtaaaatttgcttat 33150091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34466159 - 34466114
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  34466159 acatacatcattaattgaatgaacctaaaaagtaaaatttgtttat 34466114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8554703 - 8554735
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    ||||||||||||| |||||||||||||||||||    
T  8554703 ttttagattcatttaattaatgatatatgtggt 8554735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10099660 - 10099628
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  10099660 ttttaggttcattcaattaatgatatatgtggt 10099628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14308691 - 14308754
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaa 65  Q
    ||||||||||||||||| |||||| ||||||  | |||||||| ||| ||| |||||||||||||    
T  14308691 ttttagattcattcaataaatgatgtatgtgcct-acatacatcatttattgaatgaatctaaaa 14308754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14308754 - 14308691
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaa 65  Q
    ||||||||||||||||| |||||| ||||| |  ||||||||| ||| ||| |||||||||||||    
T  14308754 ttttagattcattcaataaatgatgtatgtag-gcacatacatcatttattgaatgaatctaaaa 14308691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28680947 - 28680915
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  28680947 ttttagattcattcaattaatgatgtatgtggt 28680915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30902381 - 30902349
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  30902381 ttttagatacattcaattaatgatatatgtggt 30902349  T

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Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40739524 - 40739556
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||| ||||||||||||||||||||||||||    
T  40739524 ttttaggttcattcaattaatgatatatgtggt 40739556  T

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Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42792698 - 42792778
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| ||||||||  ||||||| ||||||||||| |||||| ||||  | |||||| ||||||| | || |||||||||    
T  42792698 ttttaggttcattcatctaatgatgtatgtggttcatatacatcattagatgaatgaacctaaaaaatgaattttgcttat 42792778  T

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Target: scaffold0224 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 22733 - 22692
Alignment:
Q  34 tcacatacattattaattaaatgaatctaaaaagtaaaattt 75  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  22733 tcacatacattattaattaaatgaatctaaaaaataaaattt 22692  T

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Target: scaffold0635 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 5466 - 5512
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  5466 cacatacatcattaattaaatgaatctaaaatgtaaaattttcttat 5512  T

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Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38085 - 38131
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  38085 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 38131  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 257 - 303
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  257 cacatacatcattaattgaatgaacctaaaaagtaaaatttgcttat 303  T

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Target: scaffold0531 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7038 - 7075
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggttcaca 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7038 ttttagattcattcaattaatgatttatgtggttcaca 7075  T

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Target: scaffold0531; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 7068 - 7022
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| || ||||||| |||||||||||||||| ||||||||||||    
T  7068 cacataaatcattaattgaatgaatctaaaaagtcaaatttgcttat 7022  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 26655 - 26701
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||| |||||||||| |||||| ||||||||| ||||||||||||    
T  26655 cacatagattattaattgaatgaacctaaaaagtcaaatttgcttat 26701  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 65982 - 65936
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||| | ||||||||||||||||||| |||||||||    
T  65982 cacatacatcattaaatgaatgaatctaaaaagtaaattttgcttat 65936  T

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Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 63526 - 63562
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  63526 attaattaaatgaacctaaaaagtcaaatttgcttat 63562  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 45613 - 45643
Alignment:
Q  45 attaattaaatgaatctaaaaagtaaaattt 75  Q
    |||||||||||||||||||||||||||||||    
T  45613 attaattaaatgaatctaaaaagtaaaattt 45643  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 58378 - 58424
Alignment:
Q  35 cacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||||||| ||||||| |||||| ||||||||| ||||||||||||    
T  58378 cacatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 58424  T

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Target: scaffold0622 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 364 - 409
Alignment:
Q  36 acatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||| |||||||||||||| ||||||| ||||||||| ||||    
T  364 acatacatcattaattaaatgaacctaaaaaataaaatttgtttat 409  T

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Target: scaffold0305 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 16837 - 16910
Alignment:
Q  5 agattcattcaattaatgatatatgtggttcacatacattattaattaaatgaatctaaaaagtaaaatttgcttat 81  Q
    ||||| ||||| ||||| || |||||||||||  ||||||||||| |||||||| ||||||||| || |||||||||    
T  16837 agatttattcatttaataatgtatgtggttca--tacattattaaataaatgaa-ctaaaaagtcaattttgcttat 16910  T

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Target: scaffold0287 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 1879 - 1851
Alignment:
Q  53 aatgaatctaaaaagtaaaatttgcttat 81  Q
    |||||||||||||||||||||||||||||    
T  1879 aatgaatctaaaaagtaaaatttgcttat 1851  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 13727 - 13759
Alignment:
Q  1 ttttagattcattcaattaatgatatatgtggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  13727 ttttagattcattcaattaatgatgtatgtggt 13759  T

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