View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15002_high_23 (Length: 234)
Name: NF15002_high_23
Description: NF15002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15002_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 41593221 - 41593010
Alignment:
| Q |
1 |
aactaagtgcaaaagataaaaataaaattgaatcacaatcatcaaccaatggaaaaacttctgcaaatcacttaaagacaattaaaatgcacatgaacga |
100 |
Q |
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| T |
41593221 |
aactaagtgcaaaagataaaaataaaattgaatcacaatcatcaaccaacggaaaaacttctgcaaatcacttaaagacaattaaaatgcacatgaacga |
41593122 |
T |
|
| Q |
101 |
aagcaaaattgacacaaaacaaattatattttttgaaaggacaaaagaaattatattgcataaaccatttatttagaaatagcctctccacttacagtaa |
200 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41593121 |
aagcaaaattgacataaaacaaattatattttttgaaaggacaaaagaaattatattgcataaaccatttatttagaaatagcctctccacttacggtaa |
41593022 |
T |
|
| Q |
201 |
gaaccatggcgt |
212 |
Q |
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|||||||||||| |
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| T |
41593021 |
gaaccatggcgt |
41593010 |
T |
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