View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15002_low_22 (Length: 252)
Name: NF15002_low_22
Description: NF15002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15002_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 34581151 - 34581377
Alignment:
| Q |
18 |
tacttaagagttgagcgtccaagattgactaggtaaacctactaccgtttaatgacaaatcaataaaagttgtgttatcaacacaatcattataatattg |
117 |
Q |
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| T |
34581151 |
tactcaagagttgagcgtccgagattgactaggtaaacctactaccgtttaatgacaaatcaataaaagttgtgttatcaacacaatcattataatattg |
34581250 |
T |
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| Q |
118 |
catatcctcctcctcccttgagtaatcaacattttcttttagttccaatctaatctaattgcattgaagtcgcatacacgccaagtcgaccattgatcac |
217 |
Q |
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| T |
34581251 |
catatcct---cctcccttgagtaatcaacatttcctttttgttccaatctaatctaattgcattgaagtcgcatacacgccaagtcgaccattgatcac |
34581347 |
T |
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| Q |
218 |
ctataaacaaatgatataattgatgatgtc |
247 |
Q |
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| T |
34581348 |
ctataaacaaatgatataattgatgatgtc |
34581377 |
T |
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